Carg05140 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05140
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Location	Carg_Chr07: 3122316 .. 3124449 (+)
RNA-Seq Expression	Carg05140
Synteny	Carg05140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGGGCTGGGCCTGACATGGGGCTGTGAGGAGCCAATCCGACGATCAGGTAGAAAACATTCGAACCATGGAGGAGACAAGAAATCTGGGTTTCGTTTCTTTCCCGTCTGAATTCTGAGGTGCAGTGTAATTTCAATTGTTCTTAACAAATGGCCACTCTGTTTTCAAAATTGGCGGTGGTAAGAGGCGGAGATGGTGTGTACGTAGCGGCCGTGCCACTAAGAGCCACAAAGGGCCCAGCCCAACTCCTTGCTTCCGCTGCTTACTCTTTTAACATCTGGGATTTGCAGCATTTCATGGTTATCATCGCACCTTCTTCCCCAACTTCTCGTTCTCAGGTTTGTTTTATTAGATTATTCGTTATGCCTTCTGCACAAAGAACGATTTAGTTTGAAATTTGAATTACCCACCTCATAAAAGTGGTTTTCGAGACGGCTTGTGCAATTTCTTAGCTAATTTGTGTTGCGGCTGCTTTTATGGATGGATTGATTGGCGTTTCTTGATTGTTAGAGATGATTGCAGGCTTTGGTTTTTGATTTCCAACCTAAAGATCCGGAAGATATACAAGTTGCTCTGGCTGCTCTTTCTGGAAAAGCAGTACCAGGTCTGTTGTGCAATTGATTTTACTCTTAACTCATTGTCATAGGATAGTTTTCATTCTGATCCAAATGAAAATTATGGGGTTCAAATTATTGTTTGAACAATGTCCAAACTGATGAATGAATGCTTATTGCAGTTCAATTCTGTGAGAGATGTTTGAAACAGATTTATTTGCACTGTTTTTCGTGAAGTTTAATGTTACTTCAATTGGATGTTTGTTCGTAAGTCTTTGATTTAGAAGGGCTAGTGAAGTTATTAAGTAACCAATGATTTGGGGTAAGAAAACAAACTAAAAGAAAGCTGCCAAAAGGTGGCATCATTGGTTTGAGTTTGCCACTTCTTGTGTTCATGCAAACTTCTACTCTAACTGGATTGTTCTTTTTGGACTTTCTCTCAAGGTATTATAACGCGTATGCTAGGAAGAGGTTTCCACACTCTTATAAAGAATGTCTCGTTCTTCTATCCAACCGATGTGGGATCTCAAAATTCACTCCCCTTCAAGGCCCAACGTCCTTGTTGGCACTCATTCTCCTCTCCAATCGACCAATGTGGAATCTCACAATTCTCTCCCCCGGACGTTGGGGATCTCATAACCCATCCCCCTTTGTGGCCCAACGTCCTCGACTCTCTCCAATTGACTAATATGGTATCTCACAATTCACCCCCTTGGGGTCTTAGCATCCTCGTTGACACACCACTCAGTGTTTGGCTCTAATACCATTTGTAACAGCCCAAGCCCATCGCTAGCAAATATTGTTCGCTTTGGCTTGTTACGTATCGCCGTCAGCCTCTCGATTTTAAAACGCATCTGCTAGGGAGAGATTTCCACACCCTTATAAGATTTTTCGTTCCCCCCTCCAACCGATATGAGATCTCTTTTACTACTGCACAACTGATTATCTCATTACTCCAATGTAACCGAACTTAAAAGCTCAGGCTCTAACTATTTTCTTTATTTGCTGTGTTATCTACTTTTTGCAAATATTTTCAAAACTCGAGCTCAGTTAAGAAGATGAAAATCATTGCAAAGAAGGGTGGGAAAACAAACACAATTTCAACAACTAAATGGTCATCAAATGGGCTTAGTATTTTTCATAACCATATTCTTGGAATTTTCTGTGGAGCATTCTTCTACTTATTTCTATCATGAGCAATGAACTGAAAATCAATTATCTGCACTGTAACAGTTTTATAACTTGGTGTTAGGAGTTGTTCGTGAAAGGAAGTTGTCGAGGCTGCCAAAATACAAATGTTCATATATTGGATCGGAAGCAAACGCTGTAGAAGTCGCTCGTAAGTTCAATGAAAGTTGGGATACTAATTTGAAGATTGGTCATCATGACTGCAGAGACTACACAAATGGTAATACCAATTCCTTGTCTCAATCTTCCATCGTGTTGATTTCTTTCTCAGTCATCTTAAAATTGAAACTTGAACATTATATTTGTCTGGTTTGGAAGGCTTGGTTGAGGCTCTGCTTGGTGAAGAAAATGTGTTGGAGTACCTAAGACAGAATTCGTTTAGCATTGAATGA

mRNA sequence

ATTGGGCTGGGCCTGACATGGGGCTGTGAGGAGCCAATCCGACGATCAGGTAGAAAACATTCGAACCATGGAGGAGACAAGAAATCTGGGTTTCGTTTCTTTCCCGTCTGAATTCTGAGGTGCAGTGTAATTTCAATTGTTCTTAACAAATGGCCACTCTGTTTTCAAAATTGGCGGTGGTAAGAGGCGGAGATGGTGTGTACGTAGCGGCCGTGCCACTAAGAGCCACAAAGGGCCCAGCCCAACTCCTTGCTTCCGCTGCTTACTCTTTTAACATCTGGGATTTGCAGCATTTCATGGTTATCATCGCACCTTCTTCCCCAACTTCTCGTTCTCAGGCTTTGGTTTTTGATTTCCAACCTAAAGATCCGGAAGATATACAAGTTGCTCTGGCTGCTCTTTCTGGAAAAGCAGTACCAGGAGTTGTTCGTGAAAGGAAGTTGTCGAGGCTGCCAAAATACAAATGTTCATATATTGGATCGGAAGCAAACGCTGTAGAAGTCGCTCGTAAGTTCAATGAAAGTTGGGATACTAATTTGAAGATTGGTCATCATGACTGCAGAGACTACACAAATGGCTTGGTTGAGGCTCTGCTTGGTGAAGAAAATGTGTTGGAGTACCTAAGACAGAATTCGTTTAGCATTGAATGA

Coding sequence (CDS)

ATGGCCACTCTGTTTTCAAAATTGGCGGTGGTAAGAGGCGGAGATGGTGTGTACGTAGCGGCCGTGCCACTAAGAGCCACAAAGGGCCCAGCCCAACTCCTTGCTTCCGCTGCTTACTCTTTTAACATCTGGGATTTGCAGCATTTCATGGTTATCATCGCACCTTCTTCCCCAACTTCTCGTTCTCAGGCTTTGGTTTTTGATTTCCAACCTAAAGATCCGGAAGATATACAAGTTGCTCTGGCTGCTCTTTCTGGAAAAGCAGTACCAGGAGTTGTTCGTGAAAGGAAGTTGTCGAGGCTGCCAAAATACAAATGTTCATATATTGGATCGGAAGCAAACGCTGTAGAAGTCGCTCGTAAGTTCAATGAAAGTTGGGATACTAATTTGAAGATTGGTCATCATGACTGCAGAGACTACACAAATGGCTTGGTTGAGGCTCTGCTTGGTGAAGAAAATGTGTTGGAGTACCTAAGACAGAATTCGTTTAGCATTGAATGA

Protein sequence

MATLFSKLAVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPKYKCSYIGSEANAVEVARKFNESWDTNLKIGHHDCRDYTNGLVEALLGEENVLEYLRQNSFSIE

Homology

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BLAST of Carg05140 vs. NCBI nr
Match: KAG6604899.1 (hypothetical protein SDJN03_02216, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026982.1 hypothetical protein SDJN02_10990 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 331.3 bits (848), Expect = 4.9e-87
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MATLFSKLAVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTS 60
           MATLFSKLAVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTS
Sbjct: 1   MATLFSKLAVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTS 60

Query: 61  RSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPKYKCSYIGSEANAVEVAR 120
           RSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPKYKCSYIGSEANAVEVAR
Sbjct: 61  RSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPKYKCSYIGSEANAVEVAR 120

Query: 121 KFNESWDTNLKIGHHDCRDYTNGLVEALLGEENVLEYLRQNSFSIE 167
           KFNESWDTNLKIGHHDCRDYTNGLVEALLGEENVLEYLRQNSFSIE
Sbjct: 121 KFNESWDTNLKIGHHDCRDYTNGLVEALLGEENVLEYLRQNSFSIE 166

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BLAST of Carg05140 vs. NCBI nr
Match: XP_022948039.1 (uncharacterized protein LOC111451737 [Cucurbita moschata])

HSP 1 Score: 326.6 bits (836), Expect = 1.2e-85
Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 1   MATLFSKLAVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTS 60
           MATLFSKLAVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTS
Sbjct: 1   MATLFSKLAVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTS 60

Query: 61  RSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPKYKCSYIG-SEANAVEVA 120
           RSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPKYKCSYIG SEANAVEVA
Sbjct: 61  RSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPKYKCSYIGSSEANAVEVA 120

Query: 121 RKFNESWDTNLKIGHHDCRDYTNGLVEALLGEENVLEYLRQNSFSIE 167
           RKFNESWDTNLKIGHHDCRDYTNGLVEALLGEENVLEYLRQNSFSIE
Sbjct: 121 RKFNESWDTNLKIGHHDCRDYTNGLVEALLGEENVLEYLRQNSFSIE 167

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BLAST of Carg05140 vs. NCBI nr
Match: XP_023534339.1 (uncharacterized protein LOC111795930 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 325.1 bits (832), Expect = 3.5e-85
Identity = 165/167 (98.80%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MATLFSKLAVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTS 60
           MATLFSKLAVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTS
Sbjct: 1   MATLFSKLAVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTS 60

Query: 61  RSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPKYKCSYIG-SEANAVEVA 120
           RSQALVFDFQPKDPEDIQVALA LSGKAVPGVVRERKLSRLPKYKCSYIG SEANAVEVA
Sbjct: 61  RSQALVFDFQPKDPEDIQVALAVLSGKAVPGVVRERKLSRLPKYKCSYIGSSEANAVEVA 120

Query: 121 RKFNESWDTNLKIGHHDCRDYTNGLVEALLGEENVLEYLRQNSFSIE 167
           RKFNESWDTNLKIGHHDCRDYTNGLVEALLGEENVLEYLRQNSFSIE
Sbjct: 121 RKFNESWDTNLKIGHHDCRDYTNGLVEALLGEENVLEYLRQNSFSIE 167

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BLAST of Carg05140 vs. NCBI nr
Match: XP_022971116.1 (uncharacterized protein LOC111469884 [Cucurbita maxima])

HSP 1 Score: 318.9 bits (816), Expect = 2.5e-83
Identity = 163/167 (97.60%), Postives = 163/167 (97.60%), Query Frame = 0


Query: 1   MATLFSKLAVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTS 60
           M TLFSKLAVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAP SPTS
Sbjct: 1   MTTLFSKLAVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPPSPTS 60

Query: 61  RSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPKYKCSYIG-SEANAVEVA 120
           RSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPKYKCSYIG SEANAVEVA
Sbjct: 61  RSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPKYKCSYIGSSEANAVEVA 120

Query: 121 RKFNESWDTNLKIGHHDCRDYTNGLVEALLGEENVLEYLRQNSFSIE 167
           RKFNESWDTNLKIG HDCRDYTNGLVEALLGEENVLEYLRQNSFSIE
Sbjct: 121 RKFNESWDTNLKIGLHDCRDYTNGLVEALLGEENVLEYLRQNSFSIE 167

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BLAST of Carg05140 vs. NCBI nr
Match: XP_038901412.1 (uncharacterized protein LOC120088292 isoform X2 [Benincasa hispida])

HSP 1 Score: 287.3 bits (734), Expect = 8.2e-74
Identity = 149/168 (88.69%), Postives = 155/168 (92.26%), Query Frame = 0


Query: 1   MATLFSKL--AVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSP 60
           MA+LF+K   AV R GDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSS 
Sbjct: 1   MASLFTKWPPAVARSGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSS 60

Query: 61  TSRSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPKYKCSYIG-SEANAVE 120
           +SRSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPK KCSY+G S ANAVE
Sbjct: 61  SSRSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPKTKCSYVGYSNANAVE 120

Query: 121 VARKFNESWDTNLKIGHHDCRDYTNGLVEALLGEENVLEYLRQNSFSI 166
           VA KFN SWDTNL+IGHHDCRDYTNGLVEAL+GEENVLE LRQNS SI
Sbjct: 121 VASKFNGSWDTNLRIGHHDCRDYTNGLVEALVGEENVLERLRQNSLSI 168

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BLAST of Carg05140 vs. ExPASy TrEMBL
Match: A0A6J1G8N3 (uncharacterized protein LOC111451737 OS=Cucurbita moschata OX=3662 GN=LOC111451737 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 5.9e-86
Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 1   MATLFSKLAVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTS 60
           MATLFSKLAVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTS
Sbjct: 1   MATLFSKLAVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTS 60

Query: 61  RSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPKYKCSYIG-SEANAVEVA 120
           RSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPKYKCSYIG SEANAVEVA
Sbjct: 61  RSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPKYKCSYIGSSEANAVEVA 120

Query: 121 RKFNESWDTNLKIGHHDCRDYTNGLVEALLGEENVLEYLRQNSFSIE 167
           RKFNESWDTNLKIGHHDCRDYTNGLVEALLGEENVLEYLRQNSFSIE
Sbjct: 121 RKFNESWDTNLKIGHHDCRDYTNGLVEALLGEENVLEYLRQNSFSIE 167

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BLAST of Carg05140 vs. ExPASy TrEMBL
Match: A0A6J1I2F2 (uncharacterized protein LOC111469884 OS=Cucurbita maxima OX=3661 GN=LOC111469884 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.2e-83
Identity = 163/167 (97.60%), Postives = 163/167 (97.60%), Query Frame = 0


Query: 1   MATLFSKLAVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTS 60
           M TLFSKLAVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAP SPTS
Sbjct: 1   MTTLFSKLAVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPPSPTS 60

Query: 61  RSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPKYKCSYIG-SEANAVEVA 120
           RSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPKYKCSYIG SEANAVEVA
Sbjct: 61  RSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPKYKCSYIGSSEANAVEVA 120

Query: 121 RKFNESWDTNLKIGHHDCRDYTNGLVEALLGEENVLEYLRQNSFSIE 167
           RKFNESWDTNLKIG HDCRDYTNGLVEALLGEENVLEYLRQNSFSIE
Sbjct: 121 RKFNESWDTNLKIGLHDCRDYTNGLVEALLGEENVLEYLRQNSFSIE 167

[Close]

BLAST of Carg05140 vs. ExPASy TrEMBL
Match: A0A5D3CK24 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00410 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 9.7e-73
Identity = 147/169 (86.98%), Postives = 154/169 (91.12%), Query Frame = 0


Query: 1   MATLFSKL--AVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIA-PSS 60
           MATLF+K   AV R GDGVYVAAVPLRATKGPAQLLASAAYSFNIWD QHFMVIIA PSS
Sbjct: 1   MATLFTKSAPAVTRSGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDFQHFMVIIAPPSS 60

Query: 61  PTSRSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPKYKCSYIG-SEANAV 120
           PTS SQALVFDFQPKDPEDIQVALAALSGK VPGVVRERKLSRLP+ KCSY+G S A+AV
Sbjct: 61  PTSHSQALVFDFQPKDPEDIQVALAALSGKPVPGVVRERKLSRLPRNKCSYVGHSNASAV 120

Query: 121 EVARKFNESWDTNLKIGHHDCRDYTNGLVEALLGEENVLEYLRQNSFSI 166
           EVARKFNE+WDTNL+IGHHDCRDYTNGLVE LLGEENVLE LRQNS +I
Sbjct: 121 EVARKFNETWDTNLRIGHHDCRDYTNGLVEVLLGEENVLERLRQNSLNI 169

[Close]

BLAST of Carg05140 vs. ExPASy TrEMBL
Match: A0A1S3C2U2 (uncharacterized protein LOC103496028 OS=Cucumis melo OX=3656 GN=LOC103496028 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 9.7e-73
Identity = 147/169 (86.98%), Postives = 154/169 (91.12%), Query Frame = 0


Query: 1   MATLFSKL--AVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIA-PSS 60
           MATLF+K   AV R GDGVYVAAVPLRATKGPAQLLASAAYSFNIWD QHFMVIIA PSS
Sbjct: 1   MATLFTKSAPAVTRSGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDFQHFMVIIAPPSS 60

Query: 61  PTSRSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPKYKCSYIG-SEANAV 120
           PTS SQALVFDFQPKDPEDIQVALAALSGK VPGVVRERKLSRLP+ KCSY+G S A+AV
Sbjct: 61  PTSHSQALVFDFQPKDPEDIQVALAALSGKPVPGVVRERKLSRLPRNKCSYVGHSNASAV 120

Query: 121 EVARKFNESWDTNLKIGHHDCRDYTNGLVEALLGEENVLEYLRQNSFSI 166
           EVARKFNE+WDTNL+IGHHDCRDYTNGLVE LLGEENVLE LRQNS +I
Sbjct: 121 EVARKFNETWDTNLRIGHHDCRDYTNGLVEVLLGEENVLERLRQNSLNI 169

[Close]

BLAST of Carg05140 vs. ExPASy TrEMBL
Match: A0A5A7UDH8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001060 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 8.3e-72
Identity = 145/169 (85.80%), Postives = 153/169 (90.53%), Query Frame = 0


Query: 1   MATLFSKL--AVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIA-PSS 60
           MATLF+K   AV R GDGVYVAAVPLRATKGPAQLLASAAYSFNIWD QHFMVIIA PSS
Sbjct: 1   MATLFTKSAPAVTRSGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDFQHFMVIIAPPSS 60

Query: 61  PTSRSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPKYKCSYIG-SEANAV 120
           P+S SQALVFDFQPKDPEDIQVALAALSGK VPGVVRERKLSRLP+ KCSY+G S A+ V
Sbjct: 61  PSSHSQALVFDFQPKDPEDIQVALAALSGKPVPGVVRERKLSRLPRNKCSYVGHSNASVV 120

Query: 121 EVARKFNESWDTNLKIGHHDCRDYTNGLVEALLGEENVLEYLRQNSFSI 166
           EVARKFNE+WDTNL+IGHHDCRDYTNGLVE LLGEENVLE LRQNS +I
Sbjct: 121 EVARKFNETWDTNLRIGHHDCRDYTNGLVEVLLGEENVLERLRQNSLNI 169

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BLAST of Carg05140 vs. TAIR 10
Match: AT2G04790.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 167.5 bits (423), Expect = 8.8e-42
Identity = 86/162 (53.09%), Postives = 117/162 (72.22%), Query Frame = 0


Query: 1   MATLF--SKLAVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSP 60
           MA+LF  S       GD +YVAAVPL+A  GP QL+ S AYS NI +LQHFMV+I PSSP
Sbjct: 1   MASLFTPSPTTTSSSGDTIYVAAVPLKAAAGPPQLIMSMAYSLNISNLQHFMVLIKPSSP 60

Query: 61  TSRSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPKYKCSYIG-SEAN-AV 120
             R + LVFDFQP++PE I+ A++ LSG  +PGVV +R+L  +P+ +C  +G S+ N A+
Sbjct: 61  I-RQEVLVFDFQPRNPESIEAAISLLSGNLIPGVVLQRRLKNVPRQRCWMVGPSKGNDAM 120

Query: 121 EVARKFNESWDTNLKIGHHDCRDYTNGLVEALLGEENVLEYL 159
           E+A +FN+SW+T+L++G HDCR YTN LV+ L GE  ++E L
Sbjct: 121 EMAMEFNKSWETDLRVGFHDCRHYTNELVQHLTGEMQIVERL 161

[Close]

BLAST of Carg05140 vs. TAIR 10
Match: AT2G04790.1 (unknown protein; Has 45 Blast hits to 45 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 161.8 bits (408), Expect = 4.8e-40
Identity = 82/149 (55.03%), Postives = 110/149 (73.83%), Query Frame = 0


Query: 1   MATLF--SKLAVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSP 60
           MA+LF  S       GD +YVAAVPL+A  GP QL+ S AYS NI +LQHFMV+I PSSP
Sbjct: 1   MASLFTPSPTTTSSSGDTIYVAAVPLKAAAGPPQLIMSMAYSLNISNLQHFMVLIKPSSP 60

Query: 61  TSRSQALVFDFQPKDPEDIQVALAALSGKAVPGVVRERKLSRLPKYKCSYIG-SEAN-AV 120
             R + LVFDFQP++PE I+ A++ LSG  +PGVV +R+L  +P+ +C  +G S+ N A+
Sbjct: 61  I-RQEVLVFDFQPRNPESIEAAISLLSGNLIPGVVLQRRLKNVPRQRCWMVGPSKGNDAM 120

Query: 121 EVARKFNESWDTNLKIGHHDCRDYTNGLV 146
           E+A +FN+SW+T+L++G HDCR YTNGLV
Sbjct: 121 EMAMEFNKSWETDLRVGFHDCRHYTNGLV 148

[Close]

BLAST of Carg05140 vs. TAIR 10
Match: AT2G04790.3 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 101.3 bits (251), Expect = 7.7e-22
Identity = 53/93 (56.99%), Postives = 66/93 (70.97%), Query Frame = 0


Query: 1  MATLF--SKLAVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSP 60
          MA+LF  S       GD +YVAAVPL+A  GP QL+ S AYS NI +LQHFMV+I PSSP
Sbjct: 1  MASLFTPSPTTTSSSGDTIYVAAVPLKAAAGPPQLIMSMAYSLNISNLQHFMVLIKPSSP 60

Query: 61 TSRSQALVFDFQPKDPEDIQVALAALSGKAVPG 92
            R + LVFDFQP++PE I+ A++ LSG  +PG
Sbjct: 61 I-RQEVLVFDFQPRNPESIEAAISLLSGNLIPG 92

[Close]

BLAST of Carg05140 vs. TAIR 10
Match: AT2G04790.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; Has 33 Blast hits to 33 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 101.3 bits (251), Expect = 7.7e-22
Identity = 53/93 (56.99%), Postives = 66/93 (70.97%), Query Frame = 0


Query: 1  MATLF--SKLAVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSP 60
          MA+LF  S       GD +YVAAVPL+A  GP QL+ S AYS NI +LQHFMV+I PSSP
Sbjct: 1  MASLFTPSPTTTSSSGDTIYVAAVPLKAAAGPPQLIMSMAYSLNISNLQHFMVLIKPSSP 60

Query: 61 TSRSQALVFDFQPKDPEDIQVALAALSGKAVPG 92
            R + LVFDFQP++PE I+ A++ LSG  +PG
Sbjct: 61 I-RQEVLVFDFQPRNPESIEAAISLLSGNLIPG 92

The following BLAST results are available for this feature:

BLAST of Carg05140 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6604899.1	4.9e-87	100.00	hypothetical protein SDJN03_02216, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022948039.1	1.2e-85	99.40	uncharacterized protein LOC111451737 [Cucurbita moschata]	[more]
XP_023534339.1	3.5e-85	98.80	uncharacterized protein LOC111795930 [Cucurbita pepo subsp. pepo]	[more]
XP_022971116.1	2.5e-83	97.60	uncharacterized protein LOC111469884 [Cucurbita maxima]	[more]
XP_038901412.1	8.2e-74	88.69	uncharacterized protein LOC120088292 isoform X2 [Benincasa hispida]	[more]

BLAST of Carg05140 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg05140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G8N3	5.9e-86	99.40	uncharacterized protein LOC111451737 OS=Cucurbita moschata OX=3662 GN=LOC1114517...	[more]
A0A6J1I2F2	1.2e-83	97.60	uncharacterized protein LOC111469884 OS=Cucurbita maxima OX=3661 GN=LOC111469884...	[more]
A0A5D3CK24	9.7e-73	86.98	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C2U2	9.7e-73	86.98	uncharacterized protein LOC103496028 OS=Cucumis melo OX=3656 GN=LOC103496028 PE=...	[more]
A0A5A7UDH8	8.3e-72	85.80	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Carg05140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04790.2	8.8e-42	53.09	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]
AT2G04790.1	4.8e-40	55.03	unknown protein; Has 45 Blast hits to 45 proteins in 15 species: Archae - 0; Bac...	[more]
AT2G04790.3	7.7e-22	56.99	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]
AT2G04790.4	7.7e-22	56.99	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36342	PTB DOMAIN ENGULFMENT ADAPTER	coord: 8..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05140-RA	Carg05140-RA	mRNA