Carg05133 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05133
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2
Location	Carg_Chr07: 3091694 .. 3092240 (+)
RNA-Seq Expression	Carg05133
Synteny	Carg05133

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTAGGGTTTTAGCGTTAACCCTCGCCGGCAACGAAGCAAGACTCGAGTTCTTTCAGAATCTATCATTTCTTCTGAGTAACAATGGCCTCAATTGGCGCTAGATCCGTTTTCCGATCACTTTCCGGCTCAGCTCGCCGTGCTGCTGCTCACATTGGTTCTCAAGCCCGTTCATCGTCAGGCTCTCCCTTTCGAATGGCAACTAACAAGCCCCTCTCTCATCGAACTTTCAGGTGCGTTGACTAAATGCTCTTGCGTCCATGAAAAGCGCGAAAAGATTCCGAGTCAATAGTTGTTTGAGTTTTTTTCTTTTCCTTCTCTTTCTCCAATTGGAGAAATGTTTCAATTAATATGTATGGTGATGTATTTGGCTTATGAAGGTGTGCGGCTGAGATGAGCTTCTGTTTGGAGTCGATAATGCCGTTTCACTCTGCGTCGTCCGCAGCTTTGATGATTTCAATGCTCTCTATCTCACGCCGCAGCTGCGGTTGGCTTCCCGAAGGTGCGCTAACTGATAATTTAGTTCTCAACTTTCTTGATCTGTCATGA

mRNA sequence

AGTAGGGTTTTAGCGTTAACCCTCGCCGGCAACGAAGCAAGACTCGAGTTCTTTCAGAATCTATCATTTCTTCTGAGTAACAATGGCCTCAATTGGCGCTAGATCCGTTTTCCGATCACTTTCCGGCTCAGCTCGCCGTGCTGCTGCTCACATTGGTTCTCAAGCCCGTTCATCGTCAGGCTCTCCCTTTCGAATGGCAACTAACAAGCCCCTCTCTCATCGAACTTTCAGGTGTGCGGCTGAGATGAGCTTCTGTTTGGAGTCGATAATGCCGTTTCACTCTGCGTCGTCCGCAGCTTTGATGATTTCAATGCTCTCTATCTCACGCCGCAGCTGCGGTTGGCTTCCCGAAGGTGCGCTAACTGATAATTTAGTTCTCAACTTTCTTGATCTGTCATGA

Coding sequence (CDS)

ATGGCCTCAATTGGCGCTAGATCCGTTTTCCGATCACTTTCCGGCTCAGCTCGCCGTGCTGCTGCTCACATTGGTTCTCAAGCCCGTTCATCGTCAGGCTCTCCCTTTCGAATGGCAACTAACAAGCCCCTCTCTCATCGAACTTTCAGGTGTGCGGCTGAGATGAGCTTCTGTTTGGAGTCGATAATGCCGTTTCACTCTGCGTCGTCCGCAGCTTTGATGATTTCAATGCTCTCTATCTCACGCCGCAGCTGCGGTTGGCTTCCCGAAGGTGCGCTAACTGATAATTTAGTTCTCAACTTTCTTGATCTGTCATGA

Protein sequence

MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEGALTDNLVLNFLDLS

Homology

[Close]

BLAST of Carg05133 vs. NCBI nr
Match: KAG7026975.1 (Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 197.6 bits (501), Expect = 5.4e-47
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60
           MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE
Sbjct: 1   MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60

Query: 61  SIMPFHSASSAALMISMLSISRRSCGWLPEGALTDNLVLNFLDLS 106
           SIMPFHSASSAALMISMLSISRRSCGWLPEGALTDNLVLNFLDLS
Sbjct: 61  SIMPFHSASSAALMISMLSISRRSCGWLPEGALTDNLVLNFLDLS 105

[Close]

BLAST of Carg05133 vs. NCBI nr
Match: XP_023534316.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 171.4 bits (433), Expect = 4.1e-39
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60

Query: 61 SIMPFHSASSAALMISMLSISRRSCGWLPEG 92
          SIMPFHSASSAALMISMLSISRRSCGWLPEG
Sbjct: 61 SIMPFHSASSAALMISMLSISRRSCGWLPEG 91

[Close]

BLAST of Carg05133 vs. NCBI nr
Match: XP_022947067.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 171.4 bits (433), Expect = 4.1e-39
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60

Query: 61 SIMPFHSASSAALMISMLSISRRSCGWLPEG 92
          SIMPFHSASSAALMISMLSISRRSCGWLPEG
Sbjct: 61 SIMPFHSASSAALMISMLSISRRSCGWLPEG 91

[Close]

BLAST of Carg05133 vs. NCBI nr
Match: XP_022947068.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita moschata] >XP_023534318.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 171.4 bits (433), Expect = 4.1e-39
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60

Query: 61 SIMPFHSASSAALMISMLSISRRSCGWLPEG 92
          SIMPFHSASSAALMISMLSISRRSCGWLPEG
Sbjct: 61 SIMPFHSASSAALMISMLSISRRSCGWLPEG 91

[Close]

BLAST of Carg05133 vs. NCBI nr
Match: XP_022971141.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 168.7 bits (426), Expect = 2.7e-38
Identity = 89/91 (97.80%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRS SGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60

Query: 61 SIMPFHSASSAALMISMLSISRRSCGWLPEG 92
          SIMPFHSASSAA+MISMLSISRRSCGWLPEG
Sbjct: 61 SIMPFHSASSAAVMISMLSISRRSCGWLPEG 91

[Close]

BLAST of Carg05133 vs. ExPASy Swiss-Prot
Match: Q93ZJ3 (Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.5e-07
Identity = 38/93 (40.86%), Postives = 55/93 (59.14%), Query Frame = 0


Query: 5  GARSVFRSLSGSARRAAAHIGSQARSSSGSP--FRMATNKPLSHRTFRCAAEMSFCLESI 64
          GARS+ R  + S+R AAA  G  A  +  +P  FR    +       R   E+SFC+ES+
Sbjct: 9  GARSMLR--AASSRSAAASTGRFASQAKSAPPLFRATARRSPLLSPLRNPVELSFCVESL 68

Query: 65 MPFHSASSAALMISMLSISRRSCGWLPEGALTD 96
          +P+HSA+++ALM S LSIS ++ GWL +    D
Sbjct: 69 LPYHSATASALMTSKLSISGQTYGWLSDACNDD 99

[Close]

BLAST of Carg05133 vs. ExPASy TrEMBL
Match: A0A6J1G5E8 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451052 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.0e-39
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60

Query: 61 SIMPFHSASSAALMISMLSISRRSCGWLPEG 92
          SIMPFHSASSAALMISMLSISRRSCGWLPEG
Sbjct: 61 SIMPFHSASSAALMISMLSISRRSCGWLPEG 91

[Close]

BLAST of Carg05133 vs. ExPASy TrEMBL
Match: A0A6J1G5L1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451052 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.0e-39
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60

Query: 61 SIMPFHSASSAALMISMLSISRRSCGWLPEG 92
          SIMPFHSASSAALMISMLSISRRSCGWLPEG
Sbjct: 61 SIMPFHSASSAALMISMLSISRRSCGWLPEG 91

[Close]

BLAST of Carg05133 vs. ExPASy TrEMBL
Match: A0A6J1I155 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469903 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.3e-38
Identity = 89/91 (97.80%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRS SGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60

Query: 61 SIMPFHSASSAALMISMLSISRRSCGWLPEG 92
          SIMPFHSASSAA+MISMLSISRRSCGWLPEG
Sbjct: 61 SIMPFHSASSAAVMISMLSISRRSCGWLPEG 91

[Close]

BLAST of Carg05133 vs. ExPASy TrEMBL
Match: A0A6J1I2H5 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469903 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.3e-38
Identity = 89/91 (97.80%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRS SGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60

Query: 61 SIMPFHSASSAALMISMLSISRRSCGWLPEG 92
          SIMPFHSASSAA+MISMLSISRRSCGWLPEG
Sbjct: 61 SIMPFHSASSAAVMISMLSISRRSCGWLPEG 91

[Close]

BLAST of Carg05133 vs. ExPASy TrEMBL
Match: A0A0A0LN06 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G408390 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.3e-34
Identity = 80/92 (86.96%), Postives = 84/92 (91.30%), Query Frame = 0


Query: 1  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60
          MASIGARS FRS SGSARRAAAHIGSQ ++SS SPFRMATNKPLSHRTFRCA EMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLE 60

Query: 61 SIMPFHSASSAALMISMLSISRRSCGWLPEGA 93
          S+MPFHS SS+ALM SMLSISR SCGWLPEGA
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEGA 92

[Close]

BLAST of Carg05133 vs. TAIR 10
Match: AT2G33847.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28395.4); Has 74 Blast hits to 74 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.7 bits (156), Expect = 5.1e-11
Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 6  ARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPF 65
          ARSVFRS  G A  AA        SS+ S F++    PLSHR FR   E+S C+E+++P+
Sbjct: 4  ARSVFRSGVGRAAVAALRSTKPMPSSARSSFKLPKQSPLSHRIFRSPVELSCCVETMLPY 63

Query: 66 HSASSAALMISMLSISRRSCGWLPEGALTD 96
          H+A+++AL+ SMLS+S RS  W  +  + D
Sbjct: 64 HTATASALLNSMLSVSGRSI-WTFQDCIDD 92

[Close]

BLAST of Carg05133 vs. TAIR 10
Match: AT2G33847.2 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28395.3); Has 71 Blast hits to 71 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.7 bits (156), Expect = 5.1e-11
Identity = 40/86 (46.51%), Postives = 56/86 (65.12%), Query Frame = 0


Query: 6  ARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPF 65
          ARSVFRS  G A  AA        SS+ S F++    PLSHR FR   E+S C+E+++P+
Sbjct: 4  ARSVFRSGVGRAAVAALRSTKPMPSSARSSFKLPKQSPLSHRIFRSPVELSCCVETMLPY 63

Query: 66 HSASSAALMISMLSISRRSCGWLPEG 92
          H+A+++AL+ SMLS+S RS  W  +G
Sbjct: 64 HTATASALLNSMLSVSGRSI-WTFQG 88

[Close]

BLAST of Carg05133 vs. TAIR 10
Match: AT1G28395.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.9 bits (154), Expect = 8.7e-11
Identity = 38/89 (42.70%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 6  ARSVFRSLSGSARRAAAHIGSQAR---SSSGSPFRMATNKPLSHRTFRCAAEMSFCLESI 65
          ARSVFRS +  A   A    +  +   SS+ + FRM    PL++R FR   E+S C+E++
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSASSAALMISMLSISRRSCGWLPEG 92
          +P+H+A+++AL+ SMLS+SRR  GW+ +G
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDG 90

[Close]

BLAST of Carg05133 vs. TAIR 10
Match: AT1G28395.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.9 bits (154), Expect = 8.7e-11
Identity = 38/89 (42.70%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 6  ARSVFRSLSGSARRAAAHIGSQAR---SSSGSPFRMATNKPLSHRTFRCAAEMSFCLESI 65
          ARSVFRS +  A   A    +  +   SS+ + FRM    PL++R FR   E+S C+E++
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSASSAALMISMLSISRRSCGWLPEG 92
          +P+H+A+++AL+ SMLS+SRR  GW+ +G
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDG 90

[Close]

BLAST of Carg05133 vs. TAIR 10
Match: AT1G28395.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 63.9 bits (154), Expect = 8.7e-11
Identity = 38/89 (42.70%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 6  ARSVFRSLSGSARRAAAHIGSQAR---SSSGSPFRMATNKPLSHRTFRCAAEMSFCLESI 65
          ARSVFRS +  A   A    +  +   SS+ + FRM    PL++R FR   E+S C+E++
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSASSAALMISMLSISRRSCGWLPEG 92
          +P+H+A+++AL+ SMLS+SRR  GW+ +G
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDG 90

The following BLAST results are available for this feature:

BLAST of Carg05133 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026975.1	5.4e-47	100.00	Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Cucurbita argyr...	[more]
XP_023534316.1	4.1e-39	100.00	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ...	[more]
XP_022947067.1	4.1e-39	100.00	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ...	[more]
XP_022947068.1	4.1e-39	100.00	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ...	[more]
XP_022971141.1	2.7e-38	97.80	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ...	[more]

BLAST of Carg05133 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZJ3	1.5e-07	40.86	Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Carg05133 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G5E8	2.0e-39	100.00	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ...	[more]
A0A6J1G5L1	2.0e-39	100.00	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ...	[more]
A0A6J1I155	1.3e-38	97.80	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ...	[more]
A0A6J1I2H5	1.3e-38	97.80	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ...	[more]
A0A0A0LN06	3.3e-34	86.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G408390 PE=4 SV=1	[more]

BLAST of Carg05133 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33847.1	5.1e-11	44.44	unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc...	[more]
AT2G33847.2	5.1e-11	46.51	unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc...	[more]
AT1G28395.2	8.7e-11	42.70	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G28395.1	8.7e-11	42.70	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G28395.3	8.7e-11	42.70	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033251	Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial	PANTHER	PTHR33156:SF48	PROTEIN NUCLEAR FUSION DEFECTIVE 6, CHLOROPLASTIC/MITOCHONDRIAL	coord: 3..91
IPR043459	NFD6/NOXY2-like	PANTHER	PTHR33156	OS02G0230000 PROTEIN	coord: 3..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05133-RA	Carg05133-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000741	karyogamy