Carg05088 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05088
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of unknown function, DUF538
Location	Carg_Chr08: 1518265 .. 1520143 (-)
RNA-Seq Expression	Carg05088
Synteny	Carg05088

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTATATATATTCATAATTGAAGAATTGTTGTAATGACGACCCCACCCTTCTCTCTCACTCTTCGCCAATAATTGAAATCCACCATTCTTCTTCTTCTTCCTCTGCTCTCACTTTCAATCTCCATTGTTAATCTACTGCAGCTTTCTCCGAATTTTTCCACTACGCGTCTTAGATTTTTCCTTTTCCTGCATCGCCATGCTCTTCCTCTTGTTCTTTTTCCTCTACTTCACCCCTTCAATGGCGGCGGAGCCTCGTGTGGTCATCACCTCTGATTCGAAGTCCATTTACGATGTTCTTTCAGCTCATGGCCTCCCCAAGGGTCTACTTCCCAAAGGTATTAGGGATTACGAATTCCATGAGGAGAGTGGGCGGTTCGTGGTGTTCTTGGATCGGGAGTGTAATGCGATGTTCGAGAATCAGCTGCATTACGAGACCAATGTTACGGGCACTTTGAGTTATGGTCAGATCGGTGCCTTGTCGGGGATTTCGGCTCAGGATCTCTTCTTGTGGTTTCCTGTTAAGGGCATTCGCGTCGACATTCCGAGCTCTGGTGTTATTTATTTTGACGTTGGTGTTGTTTTCAAGCAATTCTCTCAGTCCCTCTTCGAAACCCCTCCCGAATGCGTTTCGGCTTCCAAGGTCTTGATCTACTTCTTCATTTTCTCCTTTCTCTCTTTCATTACTGTATCATATATTGTATGGTTGTTTGGTTTCAATTCGATTCAATTTATTAGAGCTTTGGAATTTGATTCATATGCAGAATCAACACAGGAAAATTGGGAACCGATTTGTTGAGTCAGGTTCAGTGAAAGTGGCTTGAAATTGCCATTGAAACAAAAGGAAAAAAAGGCTCAAAGGAGGGAGGAATCCTGCTATTCATTGTATATGTCATCAAAGCATATATATTATGGTTCTTTACACATATCATTCAGAGCAGAGTCAGAGTCTGAGAATTTCTGGTTTGTGTGAGGAATTGGAAAGGAAGGAAGAAGGGGAAGAAGAAGCACATTTGGTTCGTAGAAATTTTTGTTTGGGGGGAGATTGCAGCAAGGTAGGTGGAGTTCAGGTGAAAAATTTACACATTTCTATTCAATAATCTTCAGAAATTTTGGTGTATTGTTGTGAATATTATCATTATCTTTATCATTATTGTTATTATTACAGTGGCTGTAATGATTTTGTTTCTTTTTTTTGTCTGGAATGCAAATTCTCTGCAATAAACATGTCAAGAATAGAGTGTTTTCTTGGTTTTATACCGATTTCTTGTTTGCCAATGAGTTCTATAATCGCATATCAGTGTTGCAATGGGAATTGTCATTCTTGTCAGCATTAGTAAAACATTTTCTATGATAGATGTCTGAAACTTGATATAAGCAGTAGTTTTTGTGCTCATTTTCTAGCTTTTACTTCCTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGCATGCAAAGTGATACTCAATGGCTTGCTTGACTATGAAAATGGGTAACAAAGTGATATACTCAATCGCTTGTTTGACTATGAAAATGGGTAACTTAGTGATACTCTGATGGCTTGCTTGGCTATGAAAATGGTATTTTACCGTAGTGTTTGAATGCTGTTGAGCCTTTTTCTTTGGTGATAGACCTACCCTGATAGAGGACTAGATCAATTAGAGCGGTTGTAATAGCCTAAATCCACTTTCAGTAGATACTATCATATTTGGAGTTTCCCTCTCGGACTTTCTTTCAAGATTTTTAAAACGTGTCTAGGGAGAGATTTCCACAATCTTATGAAAAATGCTTCATTTCCCTTTTCAACTGACGTGGGATCTCACAATCCTCCCACTTCAGGGTTCGGTGTCTTCACTGGCCCTCGTTCCCCTCTAAACCACATGTTT

mRNA sequence

GTATATATATTCATAATTGAAGAATTGTTGTAATGACGACCCCACCCTTCTCTCTCACTCTTCGCCAATAATTGAAATCCACCATTCTTCTTCTTCTTCCTCTGCTCTCACTTTCAATCTCCATTGTTAATCTACTGCAGCTTTCTCCGAATTTTTCCACTACGCGTCTTAGATTTTTCCTTTTCCTGCATCGCCATGCTCTTCCTCTTGTTCTTTTTCCTCTACTTCACCCCTTCAATGGCGGCGGAGCCTCGTGTGGTCATCACCTCTGATTCGAAGTCCATTTACGATGTTCTTTCAGCTCATGGCCTCCCCAAGGGTCTACTTCCCAAAGGTATTAGGGATTACGAATTCCATGAGGAGAGTGGGCGGTTCGTGGTGTTCTTGGATCGGGAGTGTAATGCGATGTTCGAGAATCAGCTGCATTACGAGACCAATGTTACGGGCACTTTGAGTTATGGTCAGATCGGTGCCTTGTCGGGGATTTCGGCTCAGGATCTCTTCTTGTGGTTTCCTGTTAAGGGCATTCGCGTCGACATTCCGAGCTCTGGTGTTATTTATTTTGACGTTGGTGTTGTTTTCAAGCAATTCTCTCAGTCCCTCTTCGAAACCCCTCCCGAATGCGTTTCGGCTTCCAAGAATCAACACAGGAAAATTGGGAACCGATTTGTTGAGTCAGGTTCAGTGAAAGTGGCTTGAAATTGCCATTGAAACAAAAGGAAAAAAAGGCTCAAAGGAGGGAGGAATCCTGCTATTCATTGTATATGTCATCAAAGCATATATATTATGGTTCTTTACACATATCATTCAGAGCAGAGTCAGAGTCTGAGAATTTCTGGTTTGTGTGAGGAATTGGAAAGGAAGGAAGAAGGGGAAGAAGAAGCACATTTGGTTCGTAGAAATTTTTGTTTGGGGGGAGATTGCAGCAAGGTAGGTGGAGTTCAGGTGAAAAATTTACACATTTCTATTCAATAATCTTCAGAAATTTTGGTGTATTGTTGTGAATATTATCATTATCTTTATCATTATTGTTATTATTACAGTGGCTGTAATGATTTTGTTTCTTTTTTTTGTCTGGAATGCAAATTCTCTGCAATAAACATGTCAAGAATAGAGTGTTTTCTTGGTTTTATACCGATTTCTTGTTTGCCAATGAGTTCTATAATCGCATATCAGTGTTGCAATGGGAATTGTCATTCTTGTCAGCATTAGTAAAACATTTTCTATGATAGATGTCTGAAACTTGATATAAGCAGTAGTTTTTGTGCTCATTTTCTAGCTTTTACTTCCTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGCATGCAAAGTGATACTCAATGGCTTGCTTGACTATGAAAATGGGTAACAAAGTGATATACTCAATCGCTTGTTTGACTATGAAAATGGGTAACTTAGTGATACTCTGATGGCTTGCTTGGCTATGAAAATGGTATTTTACCGTAGTGTTTGAATGCTGTTGAGCCTTTTTCTTTGGTGATAGACCTACCCTGATAGAGGACTAGATCAATTAGAGCGGTTGTAATAGCCTAAATCCACTTTCAGTAGATACTATCATATTTGGAGTTTCCCTCTCGGACTTTCTTTCAAGATTTTTAAAACGTGTCTAGGGAGAGATTTCCACAATCTTATGAAAAATGCTTCATTTCCCTTTTCAACTGACGTGGGATCTCACAATCCTCCCACTTCAGGGTTCGGTGTCTTCACTGGCCCTCGTTCCCCTCTAAACCACATGTTT

Coding sequence (CDS)

ATGCTCTTCCTCTTGTTCTTTTTCCTCTACTTCACCCCTTCAATGGCGGCGGAGCCTCGTGTGGTCATCACCTCTGATTCGAAGTCCATTTACGATGTTCTTTCAGCTCATGGCCTCCCCAAGGGTCTACTTCCCAAAGGTATTAGGGATTACGAATTCCATGAGGAGAGTGGGCGGTTCGTGGTGTTCTTGGATCGGGAGTGTAATGCGATGTTCGAGAATCAGCTGCATTACGAGACCAATGTTACGGGCACTTTGAGTTATGGTCAGATCGGTGCCTTGTCGGGGATTTCGGCTCAGGATCTCTTCTTGTGGTTTCCTGTTAAGGGCATTCGCGTCGACATTCCGAGCTCTGGTGTTATTTATTTTGACGTTGGTGTTGTTTTCAAGCAATTCTCTCAGTCCCTCTTCGAAACCCCTCCCGAATGCGTTTCGGCTTCCAAGAATCAACACAGGAAAATTGGGAACCGATTTGTTGAGTCAGGTTCAGTGAAAGTGGCTTGA

Protein sequence

MLFLLFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNRFVESGSVKVA

Homology

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BLAST of Carg05088 vs. NCBI nr
Match: XP_022959707.1 (uncharacterized protein At5g01610-like [Cucurbita moschata] >KAG6593048.1 hypothetical protein SDJN03_12524, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025456.1 hypothetical protein SDJN02_11951 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 338.2 bits (866), Expect = 4.1e-89
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MLFLLFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60
           MLFLLFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF
Sbjct: 1   MLFLLFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60

Query: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120
           VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV
Sbjct: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120

Query: 121 IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNRFVESGSVKVA 168
           IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNRFVESGSVKVA
Sbjct: 121 IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNRFVESGSVKVA 167

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BLAST of Carg05088 vs. NCBI nr
Match: XP_023004236.1 (uncharacterized protein At5g01610-like [Cucurbita maxima])

HSP 1 Score: 334.0 bits (855), Expect = 7.7e-88
Identity = 164/167 (98.20%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 1   MLFLLFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60
           MLFLLFFFLYFTPSMAAEPRVV+TSD KSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF
Sbjct: 1   MLFLLFFFLYFTPSMAAEPRVVVTSDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60

Query: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120
           VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV
Sbjct: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120

Query: 121 IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNRFVESGSVKVA 168
           IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGN+FVESGSVKVA
Sbjct: 121 IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNQFVESGSVKVA 167

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BLAST of Carg05088 vs. NCBI nr
Match: XP_023550146.1 (uncharacterized protein At5g01610-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 333.6 bits (854), Expect = 1.0e-87
Identity = 165/167 (98.80%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 1   MLFLLFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60
           MLFLLFFFLY TPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF
Sbjct: 1   MLFLLFFFLYCTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60

Query: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120
           VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV
Sbjct: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120

Query: 121 IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNRFVESGSVKVA 168
           IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGN+FVESGSVKVA
Sbjct: 121 IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNQFVESGSVKVA 167

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BLAST of Carg05088 vs. NCBI nr
Match: XP_022991665.1 (uncharacterized protein At5g01610-like [Cucurbita maxima])

HSP 1 Score: 273.9 bits (699), Expect = 9.4e-70
Identity = 135/167 (80.84%), Postives = 148/167 (88.62%), Query Frame = 0


Query: 1   MLFLLFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60
           MLFL F FLYFT SMAA   +   + SKSIYDVL AHGLPKGLLPKG+RDY+F +++GRF
Sbjct: 7   MLFLWFSFLYFTSSMAAPYALSDFTASKSIYDVLLAHGLPKGLLPKGVRDYQFDQDTGRF 66

Query: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120
           +VFLD+ECNAMFENQLHYETNV+GTLSYGQIGALSGISA+DLFLWFPVKGIRVD+PSSGV
Sbjct: 67  LVFLDQECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGV 126

Query: 121 IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNRFVESGSVKVA 168
           IYFDVGVVFKQFSQSLFETPPECV  SK QHRKIGN FV+   VKVA
Sbjct: 127 IYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVA 173

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BLAST of Carg05088 vs. NCBI nr
Match: XP_022954139.1 (uncharacterized protein At5g01610-like [Cucurbita moschata])

HSP 1 Score: 270.8 bits (691), Expect = 8.0e-69
Identity = 133/166 (80.12%), Postives = 147/166 (88.55%), Query Frame = 0


Query: 1   MLFLLFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60
           +LFL F FLYFT SMAA   +   + SKSIYDVL AHGLPKGLLPKG+RDY+F +++GRF
Sbjct: 7   VLFLWFSFLYFTSSMAAPYALSDFTASKSIYDVLLAHGLPKGLLPKGVRDYQFDQDTGRF 66

Query: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120
           +VFLD+ECNAMFENQLHYETNV+GTLSYGQIGALSGISA+DLFLWFPVKGIRVD+PSSGV
Sbjct: 67  LVFLDQECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGV 126

Query: 121 IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNRFVESGSVKV 167
           IYFDVGVVFKQFSQSLFETPPECV  SK QHRKIGN FV+   VKV
Sbjct: 127 IYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKV 172

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BLAST of Carg05088 vs. ExPASy TrEMBL
Match: A0A6J1H5A7 (uncharacterized protein At5g01610-like OS=Cucurbita moschata OX=3662 GN=LOC111460699 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.0e-89
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MLFLLFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60
           MLFLLFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF
Sbjct: 1   MLFLLFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60

Query: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120
           VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV
Sbjct: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120

Query: 121 IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNRFVESGSVKVA 168
           IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNRFVESGSVKVA
Sbjct: 121 IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNRFVESGSVKVA 167

[Close]

BLAST of Carg05088 vs. ExPASy TrEMBL
Match: A0A6J1KRK2 (uncharacterized protein At5g01610-like OS=Cucurbita maxima OX=3661 GN=LOC111497630 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 3.7e-88
Identity = 164/167 (98.20%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 1   MLFLLFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60
           MLFLLFFFLYFTPSMAAEPRVV+TSD KSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF
Sbjct: 1   MLFLLFFFLYFTPSMAAEPRVVVTSDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60

Query: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120
           VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV
Sbjct: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120

Query: 121 IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNRFVESGSVKVA 168
           IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGN+FVESGSVKVA
Sbjct: 121 IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNQFVESGSVKVA 167

[Close]

BLAST of Carg05088 vs. ExPASy TrEMBL
Match: A0A6J1JTK6 (uncharacterized protein At5g01610-like OS=Cucurbita maxima OX=3661 GN=LOC111488212 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.6e-70
Identity = 135/167 (80.84%), Postives = 148/167 (88.62%), Query Frame = 0


Query: 1   MLFLLFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60
           MLFL F FLYFT SMAA   +   + SKSIYDVL AHGLPKGLLPKG+RDY+F +++GRF
Sbjct: 7   MLFLWFSFLYFTSSMAAPYALSDFTASKSIYDVLLAHGLPKGLLPKGVRDYQFDQDTGRF 66

Query: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120
           +VFLD+ECNAMFENQLHYETNV+GTLSYGQIGALSGISA+DLFLWFPVKGIRVD+PSSGV
Sbjct: 67  LVFLDQECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGV 126

Query: 121 IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNRFVESGSVKVA 168
           IYFDVGVVFKQFSQSLFETPPECV  SK QHRKIGN FV+   VKVA
Sbjct: 127 IYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVA 173

[Close]

BLAST of Carg05088 vs. ExPASy TrEMBL
Match: A0A6J1GS21 (uncharacterized protein At5g01610-like OS=Cucurbita moschata OX=3662 GN=LOC111456491 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.9e-69
Identity = 133/166 (80.12%), Postives = 147/166 (88.55%), Query Frame = 0


Query: 1   MLFLLFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60
           +LFL F FLYFT SMAA   +   + SKSIYDVL AHGLPKGLLPKG+RDY+F +++GRF
Sbjct: 7   VLFLWFSFLYFTSSMAAPYALSDFTASKSIYDVLLAHGLPKGLLPKGVRDYQFDQDTGRF 66

Query: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120
           +VFLD+ECNAMFENQLHYETNV+GTLSYGQIGALSGISA+DLFLWFPVKGIRVD+PSSGV
Sbjct: 67  LVFLDQECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGV 126

Query: 121 IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNRFVESGSVKV 167
           IYFDVGVVFKQFSQSLFETPPECV  SK QHRKIGN FV+   VKV
Sbjct: 127 IYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKV 172

[Close]

BLAST of Carg05088 vs. ExPASy TrEMBL
Match: A0A6J1DR31 (uncharacterized protein At5g01610-like OS=Momordica charantia OX=3673 GN=LOC111023048 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68
Identity = 136/171 (79.53%), Postives = 147/171 (85.96%), Query Frame = 0


Query: 1   MLFLLFFFLYFTPSMAAEPR--VVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESG 60
           MLFL FFFLYFT  MAA  R       DSKSIYD+LSAHGLPKGLLP+G+RDYE  EESG
Sbjct: 1   MLFLWFFFLYFTLPMAAPTRSYAAPKQDSKSIYDLLSAHGLPKGLLPEGVRDYEIDEESG 60

Query: 61  RFVVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSS 120
           RF VFLDRECNAMFENQLHY+ NV+GTLSYGQIGALSGISAQDLFLWFPVKGIRVD+PSS
Sbjct: 61  RFQVFLDRECNAMFENQLHYDMNVSGTLSYGQIGALSGISAQDLFLWFPVKGIRVDVPSS 120

Query: 121 GVIYFDVGVVFKQFSQSLFETPPECVSA------SKNQHRKIGNRFVESGS 164
           GVIYFDVGVVFKQFSQSLF+TPPECV+       SK+QHRKIGN+FV+ GS
Sbjct: 121 GVIYFDVGVVFKQFSQSLFDTPPECVAVQSLAANSKSQHRKIGNQFVQLGS 171

[Close]

BLAST of Carg05088 vs. TAIR 10
Match: AT3G07470.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 171.8 bits (434), Expect = 4.7e-43
Identity = 74/120 (61.67%), Postives = 100/120 (83.33%), Query Frame = 0


Query: 25  SDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQLHYETNVTG 84
           S++++IY++L A+GLP G+ PKG+R++ F  E+GRF V+L++ C A +E ++HY+ N+TG
Sbjct: 26  SETETIYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLNQACEAKYETEIHYDANITG 85

Query: 85  TLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQSLFETPPECV 144
           T+   QI  LSGISAQ+LFLWFPVKGIRVD+PSSG+IYFDVGVV KQ+S SLFETP +CV
Sbjct: 86  TIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVVRKQYSLSLFETPRDCV 145

[Close]

BLAST of Carg05088 vs. TAIR 10
Match: AT3G07460.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 156.8 bits (395), Expect = 1.6e-38
Identity = 74/139 (53.24%), Postives = 104/139 (74.82%), Query Frame = 0


Query: 23  ITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQLHYETNV 82
           + ++++SI ++L A+GLP GL PKG++ +  + E+GRF V+L++ C A +E +LHY+  V
Sbjct: 23  VIAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYETELHYDEIV 82

Query: 83  TGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQSLFETPPE 142
           +GT+ Y QI  LSGISAQ+LFLW  VKGIRVD+PSSG+I+FDVGV+ KQ+S SLFETP +
Sbjct: 83  SGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLFETPRD 142

Query: 143 CVSASKNQHRKIGNRFVES 162
           CV A +     IG   V+S
Sbjct: 143 CV-AVRGDAEFIGENKVQS 160

[Close]

BLAST of Carg05088 vs. TAIR 10
Match: AT3G07460.2 (Protein of unknown function, DUF538 )

HSP 1 Score: 155.6 bits (392), Expect = 3.5e-38
Identity = 69/123 (56.10%), Postives = 98/123 (79.67%), Query Frame = 0


Query: 23  ITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQLHYETNV 82
           + ++++SI ++L A+GLP GL PKG++ +  + E+GRF V+L++ C A +E +LHY+  V
Sbjct: 23  VIAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYETELHYDEIV 82

Query: 83  TGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQSLFETPPE 142
           +GT+ Y QI  LSGISAQ+LFLW  VKGIRVD+PSSG+I+FDVGV+ KQ+S SLFETP +
Sbjct: 83  SGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLFETPRD 142

Query: 143 CVS 146
           CV+
Sbjct: 143 CVA 145

[Close]

BLAST of Carg05088 vs. TAIR 10
Match: AT5G16380.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 136.0 bits (341), Expect = 2.9e-32
Identity = 70/150 (46.67%), Postives = 99/150 (66.00%), Query Frame = 0


Query: 5   LFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFL 64
           LFF +    S    P++    D  S YD L    LP G++PKG+ ++    ++GRF V L
Sbjct: 7   LFFLIIVLFSSILFPQLSSLPD-PSFYDYLRESNLPAGIVPKGVTNFSIDIKTGRFTVAL 66

Query: 65  DRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFD 124
              C+A FENQ H++ N++G LS G+IG LSG++ ++LFLWF VKGI VD  SSG+I+FD
Sbjct: 67  PVPCDAKFENQFHFDYNISGVLSDGRIGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHFD 126

Query: 125 VGVVFKQFSQSLFETPPECVSASKNQHRKI 155
           VGV  KQ S SLFE+P +C +A+++Q R +
Sbjct: 127 VGVADKQLSLSLFESPRDC-TAAESQPRAV 154

[Close]

BLAST of Carg05088 vs. TAIR 10
Match: AT5G54530.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 124.8 bits (312), Expect = 6.6e-29
Identity = 59/115 (51.30%), Postives = 77/115 (66.96%), Query Frame = 0


Query: 29  SIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQLHYETNVTGTLSY 88
           +++DVL + GLP GLLP+ +  Y  H + GR  VFL   C A FE  +H+E  V G LSY
Sbjct: 28  TVHDVLRSEGLPAGLLPQEVDSYILHND-GRLEVFLAAPCYAKFETNVHFEAVVRGNLSY 87

Query: 89  GQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQSLFETPPEC 144
           G +  + G+S ++LFLW  VK I V+ P+SGVI FD+GV FKQ S SLFE PP+C
Sbjct: 88  GSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIGVAFKQLSLSLFEDPPKC 141

The following BLAST results are available for this feature:

BLAST of Carg05088 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959707.1	4.1e-89	100.00	uncharacterized protein At5g01610-like [Cucurbita moschata] >KAG6593048.1 hypoth...	[more]
XP_023004236.1	7.7e-88	98.20	uncharacterized protein At5g01610-like [Cucurbita maxima]	[more]
XP_023550146.1	1.0e-87	98.80	uncharacterized protein At5g01610-like [Cucurbita pepo subsp. pepo]	[more]
XP_022991665.1	9.4e-70	80.84	uncharacterized protein At5g01610-like [Cucurbita maxima]	[more]
XP_022954139.1	8.0e-69	80.12	uncharacterized protein At5g01610-like [Cucurbita moschata]	[more]

BLAST of Carg05088 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg05088 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H5A7	2.0e-89	100.00	uncharacterized protein At5g01610-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1KRK2	3.7e-88	98.20	uncharacterized protein At5g01610-like OS=Cucurbita maxima OX=3661 GN=LOC1114976...	[more]
A0A6J1JTK6	4.6e-70	80.84	uncharacterized protein At5g01610-like OS=Cucurbita maxima OX=3661 GN=LOC1114882...	[more]
A0A6J1GS21	3.9e-69	80.12	uncharacterized protein At5g01610-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1DR31	1.1e-68	79.53	uncharacterized protein At5g01610-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Carg05088 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07470.1	4.7e-43	61.67	Protein of unknown function, DUF538	[more]
AT3G07460.1	1.6e-38	53.24	Protein of unknown function, DUF538	[more]
AT3G07460.2	3.5e-38	56.10	Protein of unknown function, DUF538	[more]
AT5G16380.1	2.9e-32	46.67	Protein of unknown function, DUF538	[more]
AT5G54530.1	6.6e-29	51.30	Protein of unknown function, DUF538	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 30..138 e-value: 5.4E-32 score: 110.6
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	T31J12.3 PROTEIN-RELATED	coord: 5..154
IPR036758	At5g01610-like superfamily	GENE3D	2.30.240.10		coord: 20..149 e-value: 2.1E-35 score: 123.5
IPR036758	At5g01610-like superfamily	SUPERFAMILY	141562	At5g01610-like	coord: 4..145
None	No IPR available	PANTHER	PTHR31676:SF110	OS01G0913100 PROTEIN	coord: 5..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05088-RA	Carg05088-RA	mRNA