Carg04932 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg04932
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	NDR1/HIN1-like protein 6
Location	Carg_Chr08: 529416 .. 532580 (+)
RNA-Seq Expression	Carg04932
Synteny	Carg04932

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATTCGCCACTGAAACCGCCGCTCCAGAGGCCTCCAGGCTACAAGGACCCAAGCGCCTCCGGTAGCTCAGCCTCCATCCCGGTCTCGAAGCCGCCGGCCGCAAGAAACAAGCCCCGTCTCCCGACCTCGTACAAGCCGAAGAAGAGGAAAAGCAGCTGCTGCAGACTCTGCTGCTGCGTGTTCTGTTTCCTAATCCTGTTCCTGATCGTGGTGGTGTCCCTCGCCGGCGCCCTGTTCTACCTGATCTTCGACCCCAAGCTTCCCCTGTTCCACCTCCTCGCCTTCCGCATCTCCTCCTTCAAGGTCGCCCCGACCCCCGACGGGTCCTACCTGGATGCTCAGGTGTCCATCCGGGTGGAGTTCAAGAACCCCAACGACAAGCTGGCGATCAAGTACGGGAAGATCGAGTACGACGTGATGGTGGGGCAGGCGGCGGAGTTCGGGCAGCGGGAGCTGCAGGGGTTCACGCAGGGGAGGCGGAGCACGACGACGGTGAAGGCGGACTCCGGGGTGAAGGGGAAGATGCTGGGGGTGGAGGACTCGACGAGGCTGGTGTCCAAGTATCAGAGTAAGGCGATGGAGGTGAAAGTAGAGGCGAGGACGGCGGTGGGCGTGGTGGCTCAAGGCTGGGCGGTGGGTCCCATCCCCGTCAAATTGGATTGCGAGTCTAAATTGAAGAATATTGAGGCCGGTGATATGCCTACATGCAACATCAATCTGCTTAGATGGTATGTTCTTCCTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTATTTATTATTATTGGAGGTTTAAAGTCCCACATCTCCTAATTTAAGGAATAATCATGTGTTTATAAAGAAATATCTCCCCATTGGTATCATCCCATTGTGGCATGAGAGCTTGGACAGTATCATACCATTGTGGCATGAGAGCCTAAGCTCAAAGTGGACAGTATCATACCATTGTGGCATGAGAGCCTAAGCTCAAAGTGAACAGTATCATACAATTGTGGCATGAGAACCTAAGCTCAAAGTGGACAGTATCATACCATTGTGTACCATTGTGGCATGAGAGTCTAAGCTCAAAGTGGACAGTATCATACCATTGTGTACCACTGTGGCATGAGAGCCTAAGCTCAAAGTGGACAGTATCATACCATTGTGGCATGAGAGCCTAAGTTCAAAGTGGACAGTATCATACCATTGTGGCATGAGAGCCTAAGTTCAAAGTGGACAGTATCATACCATTGTGGCATGAGAGCCTAAGCTCAAAGTGGACAGTATCATACCATTGTGGCATGAGAGCCTAAGCTCAAAGTGGACAGTAGTATCATACCATTGTGGCATGAGAGCCTAAGCTCAAAGTGGACAGTATCATACCATTGTGGAGAGTGGCATGAGAGCCTATGTTCAAAGTGGACAGTATCATACCATTGTGGAGAGTGGCATGAGAGCCTATGTTCAAAGTGGACAGTATCATACCATTGGGGAGAGTGGCATGAGAGCTTATGCTCAAAGGACAGTATCATACCATTATGGAGAGTGGCATGAAAGTGGACAATATCATACCATTTTGTTCATCTAACTATTATAATTATTATTTTCATTCTTTTTTATTATTTTGGATTAAAAACATCTTACTTAAATATTTTAAATATTAAATTTATAGAGATGTTTTTTCTTTTTAAATTATATTAAAAAATATTCTTAATTAATATAAAATATTTTGAATGCAGGATCAATATACGTGGATGAGGTTGCAATTGCACTATTGCTCGGAAGTCAATTATATTATATTATATTATTTATTTTTATTGGGTTGAATATTTTATTGGAACTTTTTTCTTTTTTTCCTTTTTTTTTTAAATCGAATTAATTTTTATTAAATATTACTACTTTAGAACGTCAAATAATTCTTTGACTAAATACATATTTGTTCTAAGTGTGAAATATAATGAAAAAAAAGGAAAAAAAAAAAAAGAGGGTTTCATTTAATTTGTACTAATATAAAGGGTGTTTATATTATTGTGATTATAATGTAAAGACAATGTAATTTGTTTTTTTATTGATATATTTAATTATTCTTATTATTCTTTTAAACAATATTTGTATGAAGTTATTATTTGGATTGAAAAAAAAAAAAATTATTGAGAGATATGATAACTTCACCTTGGCATGGGACCTCGAGGGTGACTGACGAGATTGAGTGGCTGAAAAACTGAGTCATTTAGCATTCTCTCAACTAATCGTTTTGATTCTTTGATGATTTGTATTTTGAGAAGAAAGTGAAAATATATTCTAATTTTTTTAGAAATTTTGAGAAATAATTAACTTTTTTTCTTCTTCACATTTATGAATTATTATAGAGATAAATTAAAAAGGGTTAAAATATAAATAACTAAAATGCATCCAAACGTTAAATACTAAAATATATAATTTAACATTACGAGTTTTTTATCCTACTCTCTATTTTGAATTGAAGGATGATATAAAATTGGTCTATTTCTGGCATCATATCTATAGTTAGCGGGGCATTCATCATAGTTAGAAGTTCCAGCTCCGTATCAAGGTCATGGTCGATATCATCAATATCGCCACTATCATCCATACCGTCACCATCATCAGTAAGAAAGCCCTTAGAATTGTTCATATTTTAACATAAAAGAATTAAACTTTTAACGACTCATTAATAATTAATTAAATAAATGAGTTGATATTATGACCTTCAAGTTTTCAAGAACGGTTAAAATATAAATTCAAATTTTAAGAAGCAATTAGATATCAATTTCAAACTTAAGAGATCGGAGGGAGGAACATCTTCGTCTTCGGCTCTGGCACCACCAATTCCGGCAACGACAACTACGTGGCCGGCCACGCCGATTAGATCTACCTCCACAATTCGCCAACAACGGAATTTGCTACTACCGGAGGAGATTTGTACTTCTTCAACGAAAATCGTTGACGACCTCGCAGCCCTCCCGGCGGAGAACCGCGAGTGCGGCGGCAGAGATGAGATGGAGTACACTACCAGCCGCCACAGACGACGGTGTTTCGCGGCGATTTGTGGGACAGTGTGGAGGATTTGGACAGAGTTCGAGCCGTGA

mRNA sequence

ATGGCGGATTCGCCACTGAAACCGCCGCTCCAGAGGCCTCCAGGCTACAAGGACCCAAGCGCCTCCGGTAGCTCAGCCTCCATCCCGGTCTCGAAGCCGCCGGCCGCAAGAAACAAGCCCCGTCTCCCGACCTCGTACAAGCCGAAGAAGAGGAAAAGCAGCTGCTGCAGACTCTGCTGCTGCGTGTTCTGTTTCCTAATCCTGTTCCTGATCGTGGTGGTGTCCCTCGCCGGCGCCCTGTTCTACCTGATCTTCGACCCCAAGCTTCCCCTGTTCCACCTCCTCGCCTTCCGCATCTCCTCCTTCAAGGTCGCCCCGACCCCCGACGGGTCCTACCTGGATGCTCAGGTGTCCATCCGGGTGGAGTTCAAGAACCCCAACGACAAGCTGGCGATCAAGTACGGGAAGATCGAGTACGACGTGATGGTGGGGCAGGCGGCGGAGTTCGGGCAGCGGGAGCTGCAGGGGTTCACGCAGGGGAGGCGGAGCACGACGACGGTGAAGGCGGACTCCGGGGTGAAGGGGAAGATGCTGGGGGTGGAGGACTCGACGAGGCTGGTGTCCAAGTATCAGAGTAAGGCGATGGAGGTGAAAGTAGAGGCGAGGACGGCGGTGGGCGTGGTGGCTCAAGGCTGGGCGGTGGGTCCCATCCCCGTCAAATTGGATTGCGAGTCTAAATTGAAGAATATTGAGGCCGGTGATATGCCTACATGCAACATCAATCTGCTTAGATGTGGCATGAGAGCCTATGTTCAAAGTGGACAGTATCATACCATTGTGGAGAGTGGCATGAGAGCCTATGTTCAAAGTGGACAGTATCATACCATTGGGGAGAGTGGCATGAGAGCTTATGCTCAAAGGACAAGATCGGAGGGAGGAACATCTTCGTCTTCGGCTCTGGCACCACCAATTCCGGCAACGACAACTACGTGGCCGGCCACGCCGATTAGATCTACCTCCACAATTCGCCAACAACGGAATTTGCTACTACCGGAGGAGATTTGTACTTCTTCAACGAAAATCGTTGACGACCTCGCAGCCCTCCCGGCGGAGAACCGCGAGTGCGGCGGCAGAGATGAGATGGAGTACACTACCAGCCGCCACAGACGACGGTGTTTCGCGGCGATTTGTGGGACAGTGTGGAGGATTTGGACAGAGTTCGAGCCGTGA

Coding sequence (CDS)

ATGGCGGATTCGCCACTGAAACCGCCGCTCCAGAGGCCTCCAGGCTACAAGGACCCAAGCGCCTCCGGTAGCTCAGCCTCCATCCCGGTCTCGAAGCCGCCGGCCGCAAGAAACAAGCCCCGTCTCCCGACCTCGTACAAGCCGAAGAAGAGGAAAAGCAGCTGCTGCAGACTCTGCTGCTGCGTGTTCTGTTTCCTAATCCTGTTCCTGATCGTGGTGGTGTCCCTCGCCGGCGCCCTGTTCTACCTGATCTTCGACCCCAAGCTTCCCCTGTTCCACCTCCTCGCCTTCCGCATCTCCTCCTTCAAGGTCGCCCCGACCCCCGACGGGTCCTACCTGGATGCTCAGGTGTCCATCCGGGTGGAGTTCAAGAACCCCAACGACAAGCTGGCGATCAAGTACGGGAAGATCGAGTACGACGTGATGGTGGGGCAGGCGGCGGAGTTCGGGCAGCGGGAGCTGCAGGGGTTCACGCAGGGGAGGCGGAGCACGACGACGGTGAAGGCGGACTCCGGGGTGAAGGGGAAGATGCTGGGGGTGGAGGACTCGACGAGGCTGGTGTCCAAGTATCAGAGTAAGGCGATGGAGGTGAAAGTAGAGGCGAGGACGGCGGTGGGCGTGGTGGCTCAAGGCTGGGCGGTGGGTCCCATCCCCGTCAAATTGGATTGCGAGTCTAAATTGAAGAATATTGAGGCCGGTGATATGCCTACATGCAACATCAATCTGCTTAGATGTGGCATGAGAGCCTATGTTCAAAGTGGACAGTATCATACCATTGTGGAGAGTGGCATGAGAGCCTATGTTCAAAGTGGACAGTATCATACCATTGGGGAGAGTGGCATGAGAGCTTATGCTCAAAGGACAAGATCGGAGGGAGGAACATCTTCGTCTTCGGCTCTGGCACCACCAATTCCGGCAACGACAACTACGTGGCCGGCCACGCCGATTAGATCTACCTCCACAATTCGCCAACAACGGAATTTGCTACTACCGGAGGAGATTTGTACTTCTTCAACGAAAATCGTTGACGACCTCGCAGCCCTCCCGGCGGAGAACCGCGAGTGCGGCGGCAGAGATGAGATGGAGTACACTACCAGCCGCCACAGACGACGGTGTTTCGCGGCGATTTGTGGGACAGTGTGGAGGATTTGGACAGAGTTCGAGCCGTGA

Protein sequence

MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCCCVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIRVEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNINLLRCGMRAYVQSGQYHTIVESGMRAYVQSGQYHTIGESGMRAYAQRTRSEGGTSSSSALAPPIPATTTTWPATPIRSTSTIRQQRNLLLPEEICTSSTKIVDDLAALPAENRECGGRDEMEYTTSRHRRRCFAAICGTVWRIWTEFEP

Homology

[Close]

BLAST of Carg04932 vs. NCBI nr
Match: KAG7025304.1 (NDR1/HIN1-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 764.2 bits (1972), Expect = 5.3e-217
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0


Query: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60
           MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC
Sbjct: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60

Query: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120
           CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR
Sbjct: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120

Query: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 180
           VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV
Sbjct: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 180

Query: 181 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI 240
           EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI
Sbjct: 181 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI 240

Query: 241 NLLRCGMRAYVQSGQYHTIVESGMRAYVQSGQYHTIGESGMRAYAQRTRSEGGTSSSSAL 300
           NLLRCGMRAYVQSGQYHTIVESGMRAYVQSGQYHTIGESGMRAYAQRTRSEGGTSSSSAL
Sbjct: 241 NLLRCGMRAYVQSGQYHTIVESGMRAYVQSGQYHTIGESGMRAYAQRTRSEGGTSSSSAL 300

Query: 301 APPIPATTTTWPATPIRSTSTIRQQRNLLLPEEICTSSTKIVDDLAALPAENRECGGRDE 360
           APPIPATTTTWPATPIRSTSTIRQQRNLLLPEEICTSSTKIVDDLAALPAENRECGGRDE
Sbjct: 301 APPIPATTTTWPATPIRSTSTIRQQRNLLLPEEICTSSTKIVDDLAALPAENRECGGRDE 360

Query: 361 MEYTTSRHRRRCFAAICGTVWRIWTEFEP 390
           MEYTTSRHRRRCFAAICGTVWRIWTEFEP
Sbjct: 361 MEYTTSRHRRRCFAAICGTVWRIWTEFEP 389

[Close]

BLAST of Carg04932 vs. NCBI nr
Match: KAG6592899.1 (NDR1/HIN1-like protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 642.5 bits (1656), Expect = 2.3e-180
Identity = 341/389 (87.66%), Postives = 342/389 (87.92%), Query Frame = 0


Query: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60
           MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC
Sbjct: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60

Query: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120
           CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR
Sbjct: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120

Query: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 180
           VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV
Sbjct: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 180

Query: 181 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI 240
           EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI
Sbjct: 181 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI 240

Query: 241 NLLRCGMRAYVQSGQYHTIVESGMRAYVQSGQYHTIGESGMRAYAQRTRSEGGTSSSSAL 300
           NLLR                       +Q                      GGTSSSSAL
Sbjct: 241 NLLRW--------------------INIQI---------------------GGTSSSSAL 300

Query: 301 APPIPATTTTWPATPIRSTSTIRQQRNLLLPEEICTSSTKIVDDLAALPAENRECGGRDE 360
            PPIPATTTTWPATPIRSTSTIRQQRNLLL EEICTSSTKIVDDLAALPAENRECGGRDE
Sbjct: 301 TPPIPATTTTWPATPIRSTSTIRQQRNLLLAEEICTSSTKIVDDLAALPAENRECGGRDE 348

Query: 361 MEYTTSRHRRRCFAAICGTVWRIWTEFEP 390
           MEYTTSRHRRRCFAAICGTVWRIWTEFEP
Sbjct: 361 MEYTTSRHRRRCFAAICGTVWRIWTEFEP 348

[Close]

BLAST of Carg04932 vs. NCBI nr
Match: XP_022960198.1 (NDR1/HIN1-like protein 6 [Cucurbita moschata] >XP_023515084.1 NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 474.9 bits (1221), Expect = 6.5e-130
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60
           MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC
Sbjct: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60

Query: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120
           CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR
Sbjct: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120

Query: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 180
           VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV
Sbjct: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 180

Query: 181 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI 240
           EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI
Sbjct: 181 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI 240

Query: 241 NLLR 245
           NLLR
Sbjct: 241 NLLR 244

[Close]

BLAST of Carg04932 vs. NCBI nr
Match: XP_023005046.1 (NDR1/HIN1-like protein 13 [Cucurbita maxima])

HSP 1 Score: 468.4 bits (1204), Expect = 6.1e-128
Identity = 241/244 (98.77%), Postives = 242/244 (99.18%), Query Frame = 0


Query: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60
           MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC
Sbjct: 85  MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 144

Query: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120
           CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR
Sbjct: 145 CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 204

Query: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 180
           VEFKNPNDKLAI+YGKIEYDVMVGQAAEFGQRELQGFTQ RRSTTTVKADSGVKGKMLGV
Sbjct: 205 VEFKNPNDKLAIRYGKIEYDVMVGQAAEFGQRELQGFTQARRSTTTVKADSGVKGKMLGV 264

Query: 181 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI 240
           EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPI VKLDCESKLKNIEAGDMPTCNI
Sbjct: 265 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPISVKLDCESKLKNIEAGDMPTCNI 324

Query: 241 NLLR 245
           NLLR
Sbjct: 325 NLLR 328

[Close]

BLAST of Carg04932 vs. NCBI nr
Match: KAA0032991.1 (protein YLS9 isoform X1 [Cucumis melo var. makuwa] >TYK21975.1 protein YLS9 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 380.9 bits (977), Expect = 1.3e-101
Identity = 194/250 (77.60%), Postives = 216/250 (86.40%), Query Frame = 0


Query: 1   MADSPLKPPLQRPPGYKD---PSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCR 60
           MAD P+KPPLQ+PPGYKD    + S SSAS     PP  R+KPRLP+SYKPKKRK +CCR
Sbjct: 1   MADLPMKPPLQKPPGYKDHHTAATSSSSASTVTHLPPPPRSKPRLPSSYKPKKRKRNCCR 60

Query: 61  LCCCVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQV 120
            CCC+FCFLILFLIVV +LA ALFYLI+DPKLP+FHLLAFRIS+FKV+ TPDGS+LDAQV
Sbjct: 61  TCCCIFCFLILFLIVVAALALALFYLIYDPKLPVFHLLAFRISTFKVSATPDGSFLDAQV 120

Query: 121 SIRVEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKM 180
           SIRVEFKNPNDKL+IKYGKIEYDVMVGQA EFG+REL GFTQ RRSTTTVKA++ VK KM
Sbjct: 121 SIRVEFKNPNDKLSIKYGKIEYDVMVGQATEFGRRELAGFTQDRRSTTTVKAEAAVKNKM 180

Query: 181 LGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPT 240
           L VED  RL+SK+QSKA+EVKVEA TAVGVV QGW +GPI VKLDCE+KLKNIE GDMP 
Sbjct: 181 LAVEDGARLLSKFQSKALEVKVEAETAVGVVIQGWGLGPITVKLDCETKLKNIEGGDMPI 240

Query: 241 CNINLLRCGM 248
           CNINLLRC M
Sbjct: 241 CNINLLRCDM 250

[Close]

BLAST of Carg04932 vs. ExPASy Swiss-Prot
Match: Q8LD98 (NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.3e-08
Identity = 49/156 (31.41%), Postives = 71/156 (45.51%), Query Frame = 0


Query: 12  RPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCCCVFCFLILFLI 71
           RP     P  S  S     SK P  +   R      PKKR+S CCR  C  FCFL+L L+
Sbjct: 19  RPTAPLVPRGSSRSEHGDPSKVPLNQRPQRFVPLAPPKKRRSCCCRCFCYTFCFLLL-LV 78

Query: 72  VVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIRVEFKNPNDKLA 131
           V V  +  + YL+F PKLP + +   +++ F +      S L    ++ +  KNPN+K+ 
Sbjct: 79  VAVGASIGILYLVFKPKLPDYSIDRLQLTRFAL---NQDSSLTTAFNVTITAKNPNEKIG 138

Query: 132 IKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTV 168
           I Y       +     +     L  F QG  +TT +
Sbjct: 139 IYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVI 170

[Close]

BLAST of Carg04932 vs. ExPASy TrEMBL
Match: A0A6J1H856 (NDR1/HIN1-like protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111461008 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 3.1e-130
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60
           MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC
Sbjct: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60

Query: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120
           CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR
Sbjct: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120

Query: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 180
           VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV
Sbjct: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 180

Query: 181 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI 240
           EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI
Sbjct: 181 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI 240

Query: 241 NLLR 245
           NLLR
Sbjct: 241 NLLR 244

[Close]

BLAST of Carg04932 vs. ExPASy TrEMBL
Match: A0A6J1KTU7 (NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111498155 PE=4 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 2.9e-128
Identity = 241/244 (98.77%), Postives = 242/244 (99.18%), Query Frame = 0


Query: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60
           MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC
Sbjct: 85  MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 144

Query: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120
           CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR
Sbjct: 145 CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 204

Query: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 180
           VEFKNPNDKLAI+YGKIEYDVMVGQAAEFGQRELQGFTQ RRSTTTVKADSGVKGKMLGV
Sbjct: 205 VEFKNPNDKLAIRYGKIEYDVMVGQAAEFGQRELQGFTQARRSTTTVKADSGVKGKMLGV 264

Query: 181 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPTCNI 240
           EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPI VKLDCESKLKNIEAGDMPTCNI
Sbjct: 265 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPISVKLDCESKLKNIEAGDMPTCNI 324

Query: 241 NLLR 245
           NLLR
Sbjct: 325 NLLR 328

[Close]

BLAST of Carg04932 vs. ExPASy TrEMBL
Match: A0A5D3DEK8 (Protein YLS9 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold482G00040 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 6.2e-102
Identity = 194/250 (77.60%), Postives = 216/250 (86.40%), Query Frame = 0


Query: 1   MADSPLKPPLQRPPGYKD---PSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCR 60
           MAD P+KPPLQ+PPGYKD    + S SSAS     PP  R+KPRLP+SYKPKKRK +CCR
Sbjct: 1   MADLPMKPPLQKPPGYKDHHTAATSSSSASTVTHLPPPPRSKPRLPSSYKPKKRKRNCCR 60

Query: 61  LCCCVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQV 120
            CCC+FCFLILFLIVV +LA ALFYLI+DPKLP+FHLLAFRIS+FKV+ TPDGS+LDAQV
Sbjct: 61  TCCCIFCFLILFLIVVAALALALFYLIYDPKLPVFHLLAFRISTFKVSATPDGSFLDAQV 120

Query: 121 SIRVEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKM 180
           SIRVEFKNPNDKL+IKYGKIEYDVMVGQA EFG+REL GFTQ RRSTTTVKA++ VK KM
Sbjct: 121 SIRVEFKNPNDKLSIKYGKIEYDVMVGQATEFGRRELAGFTQDRRSTTTVKAEAAVKNKM 180

Query: 181 LGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPT 240
           L VED  RL+SK+QSKA+EVKVEA TAVGVV QGW +GPI VKLDCE+KLKNIE GDMP 
Sbjct: 181 LAVEDGARLLSKFQSKALEVKVEAETAVGVVIQGWGLGPITVKLDCETKLKNIEGGDMPI 240

Query: 241 CNINLLRCGM 248
           CNINLLRC M
Sbjct: 241 CNINLLRCDM 250

[Close]

BLAST of Carg04932 vs. ExPASy TrEMBL
Match: A0A1S3BDG3 (uncharacterized protein LOC103488682 OS=Cucumis melo OX=3656 GN=LOC103488682 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 1.5e-100
Identity = 192/247 (77.73%), Postives = 214/247 (86.64%), Query Frame = 0


Query: 1   MADSPLKPPLQRPPGYKD---PSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCR 60
           MAD P+KPPLQ+PPGYKD    + S SSAS     PP  R+KPRLP+SYKPKKRK +CCR
Sbjct: 1   MADLPMKPPLQKPPGYKDHHTAATSSSSASTVTHLPPPPRSKPRLPSSYKPKKRKRNCCR 60

Query: 61  LCCCVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQV 120
            CCC+FCFLILFLIVV +LA ALFYLI+DPKLP+FHLLAFRIS+FKV+ TPDGS+LDAQV
Sbjct: 61  TCCCIFCFLILFLIVVAALALALFYLIYDPKLPVFHLLAFRISTFKVSATPDGSFLDAQV 120

Query: 121 SIRVEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKM 180
           SIRVEFKNPNDKL+IKYGKIEYDVMVGQA EFG+REL GFTQ RRSTTTVKA++ VK KM
Sbjct: 121 SIRVEFKNPNDKLSIKYGKIEYDVMVGQATEFGRRELAGFTQDRRSTTTVKAEAAVKNKM 180

Query: 181 LGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPT 240
           L VED  RL+SK+QSKA+EVKVEA TAVGVV QGW +GPI VKLDCE+KLKNIE GDMP 
Sbjct: 181 LAVEDGARLLSKFQSKALEVKVEAETAVGVVIQGWGLGPITVKLDCETKLKNIEGGDMPI 240

Query: 241 CNINLLR 245
           CNINLLR
Sbjct: 241 CNINLLR 247

[Close]

BLAST of Carg04932 vs. ExPASy TrEMBL
Match: A0A0A0KCD8 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G042460 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 3.7e-99
Identity = 190/247 (76.92%), Postives = 212/247 (85.83%), Query Frame = 0


Query: 1   MADSPLKPPLQRPPGYKD---PSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCR 60
           MAD PLKPPLQ+PPGYKD    + S SSAS     PP  R KPR P+SYKPKKRK +CCR
Sbjct: 1   MADLPLKPPLQKPPGYKDHNTTATSSSSASTATHLPPPLRPKPRPPSSYKPKKRKRNCCR 60

Query: 61  LCCCVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQV 120
            CCC+FCFLILFLIVV +LA ALFYL++DPKLP+FHLLAFRISSFKV+ TPDGS+LD+QV
Sbjct: 61  TCCCIFCFLILFLIVVAALALALFYLLYDPKLPVFHLLAFRISSFKVSTTPDGSFLDSQV 120

Query: 121 SIRVEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKM 180
           SIRVEFKNPN+KL+IKYGKIEYDV VGQA EFG+REL GFTQGRRSTTTVKA++ VK KM
Sbjct: 121 SIRVEFKNPNEKLSIKYGKIEYDVTVGQATEFGRRELAGFTQGRRSTTTVKAEAAVKNKM 180

Query: 181 LGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPT 240
           L VED  RL+SK+QSKA+EVKVEA T VGVV QGW +GPI VKLDCESKLKNI+ GDMPT
Sbjct: 181 LAVEDGGRLLSKFQSKALEVKVEAETEVGVVVQGWGLGPITVKLDCESKLKNIDGGDMPT 240

Query: 241 CNINLLR 245
           CNINLLR
Sbjct: 241 CNINLLR 247

[Close]

BLAST of Carg04932 vs. TAIR 10
Match: AT2G46300.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 178.7 bits (452), Expect = 8.9e-45
Identity = 99/247 (40.08%), Postives = 142/247 (57.49%), Query Frame = 0


Query: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60
           MAD  + P LQ+PPGY+DP+ S      P  +    R    +PTSY+PKK++ SCCR CC
Sbjct: 1   MADYQMNPVLQKPPGYRDPNMSSPPPPPPPIQQQPMRKAVPMPTSYRPKKKRRSCCRFCC 60

Query: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120
           C  C  ++  I ++ +  A+FYL FDPKLP F L +FR+  FK+A  PDG+ L A    R
Sbjct: 61  CCICITLVLFIFLLLVGTAVFYLWFDPKLPTFSLASFRLDGFKLADDPDGASLSATAVAR 120

Query: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAE---FGQRELQGFTQGRRSTTTVKADSGVKGKM 180
           VE KNPN KL   YG    D+ VG   +    G+  + GF QG +++T+VK ++ VK ++
Sbjct: 121 VEMKNPNSKLVFYYGNTAVDLSVGSGNDETGMGETTMNGFRQGPKNSTSVKVETTVKNQL 180

Query: 181 LGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMPT 240
           +    + RL +K+QSK + + V A+T VG+   G  +G + V L C     N    D P 
Sbjct: 181 VERGLAKRLAAKFQSKDLVINVVAKTKVGLGVGGIKIGMLAVNLRCGGVSLNKLDTDSPK 240

Query: 241 CNINLLR 245
           C +N L+
Sbjct: 241 CILNTLK 247

[Close]

BLAST of Carg04932 vs. TAIR 10
Match: AT4G01110.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01453.1); Has 273 Blast hits to 272 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 273; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 110.9 bits (276), Expect = 2.3e-24
Identity = 80/253 (31.62%), Postives = 131/253 (51.78%), Query Frame = 0


Query: 6   LKPPLQRPPGYKD-------PSASGSSASIPVSKPPAARNKPRLPTSYKP-KKRKSSCCR 65
           LKP LQ+PPGY++       P  S SS+S  + +PP    K  +P ++ P KKR+ S CR
Sbjct: 7   LKPVLQKPPGYRELHSQPQTPLGSSSSSSSMLRRPP----KHAIPAAFYPTKKRQWSRCR 66

Query: 66  LCCCVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDG---SYLD 125
           + CC  C  +  +I+++ L  ++F+L + P+LP+  L +FR+S+F  +    G   S L 
Sbjct: 67  VFCCCVCITVAIVILLLILTVSVFFLYYSPRLPVVRLSSFRVSNFNFSGGKAGDGLSQLT 126

Query: 126 AQVSIRVEFKNPNDKLAIKYGKIEYDVMVGQ---AAEFGQRELQGFTQGRRSTTTVKADS 185
           A+ + R++F+NPN KL   YG ++  V VG+       G  +++GF +   + T V    
Sbjct: 127 AEATARLDFRNPNGKLRYYYGNVDVAVSVGEDDFETSLGSTKVKGFVEKPGNRTVVIVPI 186

Query: 186 GVKGKMLGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIE 245
            VK + +      RL +  +SK + VKV A+T VG+      +  + V + C        
Sbjct: 187 KVKKQQVDDPTVKRLRADMKSKKLVVKVMAKTKVGLGVGRRKIVTVGVTISCGGVRLQTL 246

[Close]

BLAST of Carg04932 vs. TAIR 10
Match: AT1G01453.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 108.6 bits (270), Expect = 1.1e-23
Identity = 75/249 (30.12%), Postives = 129/249 (51.81%), Query Frame = 0


Query: 2   ADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCCC 61
           A+ PL+P LQ+PPG++D     S+     +  P  R +P  P     KKR+ S CR+ CC
Sbjct: 16  AEKPLQPALQKPPGFRDQQNQPSAPPSGTATLPRRRPRPIHPAD---KKRRCSFCRVFCC 75

Query: 62  VFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVA--PTPDG-SYLDAQVS 121
             C L   +++++ +A A+F+L + PKLP+  L +F+IS+F  +   + DG S+L A  +
Sbjct: 76  CVCILFAVILLLILIAVAVFFLWYSPKLPVVRLASFKISNFNFSDGKSDDGWSFLSADTT 135

Query: 122 IRVEFKNPNDKLAIKYGKIEYDVMVGQ---AAEFGQRELQGFTQGRRSTTTVKADSGVKG 181
             ++F+NPN KL   YG  +  V++G+          +++GF +   + T V   + V+ 
Sbjct: 136 SVLDFRNPNGKLTFYYGDTDVAVILGEKDFETNLESTKVKGFIEKPGNRTAVIVPTTVRK 195

Query: 182 KMLGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDM 241
           + +    + RL  + +SK + V V A+T VG+      +  + V L C   +       M
Sbjct: 196 RQVDDPTAKRLQVELKSKKLLVTVTAKTKVGLAVGSRKIVTVGVSLRCGGVILQTLDSKM 255

Query: 242 PTCNINLLR 245
             C I +L+
Sbjct: 256 AQCTIKMLK 261

[Close]

BLAST of Carg04932 vs. TAIR 10
Match: AT1G01453.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 108.6 bits (270), Expect = 1.1e-23
Identity = 75/249 (30.12%), Postives = 129/249 (51.81%), Query Frame = 0


Query: 2   ADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCCC 61
           A+ PL+P LQ+PPG++D     S+     +  P  R +P  P     KKR+ S CR+ CC
Sbjct: 16  AEKPLQPALQKPPGFRDQQNQPSAPPSGTATLPRRRPRPIHPAD---KKRRCSFCRVFCC 75

Query: 62  VFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVA--PTPDG-SYLDAQVS 121
             C L   +++++ +A A+F+L + PKLP+  L +F+IS+F  +   + DG S+L A  +
Sbjct: 76  CVCILFAVILLLILIAVAVFFLWYSPKLPVVRLASFKISNFNFSDGKSDDGWSFLSADTT 135

Query: 122 IRVEFKNPNDKLAIKYGKIEYDVMVGQ---AAEFGQRELQGFTQGRRSTTTVKADSGVKG 181
             ++F+NPN KL   YG  +  V++G+          +++GF +   + T V   + V+ 
Sbjct: 136 SVLDFRNPNGKLTFYYGDTDVAVILGEKDFETNLESTKVKGFIEKPGNRTAVIVPTTVRK 195

Query: 182 KMLGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDM 241
           + +    + RL  + +SK + V V A+T VG+      +  + V L C   +       M
Sbjct: 196 RQVDDPTAKRLQVELKSKKLLVTVTAKTKVGLAVGSRKIVTVGVSLRCGGVILQTLDSKM 255

Query: 242 PTCNINLLR 245
             C I +L+
Sbjct: 256 AQCTIKMLK 261

[Close]

BLAST of Carg04932 vs. TAIR 10
Match: AT1G65690.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 62.4 bits (150), Expect = 9.3e-10
Identity = 49/156 (31.41%), Postives = 71/156 (45.51%), Query Frame = 0


Query: 12  RPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCCCVFCFLILFLI 71
           RP     P  S  S     SK P  +   R      PKKR+S CCR  C  FCFL+L L+
Sbjct: 19  RPTAPLVPRGSSRSEHGDPSKVPLNQRPQRFVPLAPPKKRRSCCCRCFCYTFCFLLL-LV 78

Query: 72  VVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIRVEFKNPNDKLA 131
           V V  +  + YL+F PKLP + +   +++ F +      S L    ++ +  KNPN+K+ 
Sbjct: 79  VAVGASIGILYLVFKPKLPDYSIDRLQLTRFAL---NQDSSLTTAFNVTITAKNPNEKIG 138

Query: 132 IKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTV 168
           I Y       +     +     L  F QG  +TT +
Sbjct: 139 IYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVI 170

The following BLAST results are available for this feature:

BLAST of Carg04932 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025304.1	5.3e-217	100.00	NDR1/HIN1-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6592899.1	2.3e-180	87.66	NDR1/HIN1-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022960198.1	6.5e-130	100.00	NDR1/HIN1-like protein 6 [Cucurbita moschata] >XP_023515084.1 NDR1/HIN1-like pro...	[more]
XP_023005046.1	6.1e-128	98.77	NDR1/HIN1-like protein 13 [Cucurbita maxima]	[more]
KAA0032991.1	1.3e-101	77.60	protein YLS9 isoform X1 [Cucumis melo var. makuwa] >TYK21975.1 protein YLS9 isof...	[more]

BLAST of Carg04932 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LD98	1.3e-08	31.41	NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1	[more]

BLAST of Carg04932 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H856	3.1e-130	100.00	NDR1/HIN1-like protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111461008 PE=4 SV=1	[more]
A0A6J1KTU7	2.9e-128	98.77	NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111498155 PE=4 SV=1	[more]
A0A5D3DEK8	6.2e-102	77.60	Protein YLS9 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BDG3	1.5e-100	77.73	uncharacterized protein LOC103488682 OS=Cucumis melo OX=3656 GN=LOC103488682 PE=...	[more]
A0A0A0KCD8	3.7e-99	76.92	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G042460 PE=4 ...	[more]

BLAST of Carg04932 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46300.1	8.9e-45	40.08	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G01110.1	2.3e-24	31.62	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G01453.1	1.1e-23	30.12	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G01453.2	1.1e-23	30.12	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G65690.1	9.3e-10	31.41	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 121..223 e-value: 2.5E-9 score: 37.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 288..310
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 287..310
None	No IPR available	PANTHER	PTHR31234:SF35	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 1..244
None	No IPR available	PANTHER	PTHR31234	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 1..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04932-RA	Carg04932-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane