Carg04926 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg04926
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationCarg_Chr08: 518107 .. 520252 (-)
RNA-Seq ExpressionCarg04926
SyntenyCarg04926
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACTTGTGTTCTCCATTGTTGTTACGACCCCTTCCGACTCCGATCCAAACACCCTTCTTCTCCACACCCTTCTTCTCCACACCCTTTTGACCTTAATAAAGGCAGCAGCTGCCTCTCCTCCAGAATCCCACTCCCAGAGCCCTACACCAAGCTTCTTCTATCCCTACCCACTCGCGCAGTTCCAACGCATAGTCCTACAAAGCATGCGACTCTATTAGTCGACACTTTTCACGAACACCATACCCTAAAAGCTTTGCTCTCCGACCTCCAGAAAAGGGGTTCCTGTCCTTTGCTATTACTTAGACAACATGGAGATTGGAACAGAGACCATTTCTGGCTCGTTGTTAAATTCCTCAGAAATGCTTCAAGATCCCATGAAGTCCTTAAGGTGCGGCTTGTCTCTAAGATTTTAGGTTCAAATATTCTTTGGCTTCTCTTAGTTTTATATGTAATGATTTAATTCTATGCTAAACTGTTCAAATCAATCTCATAAGCAGAGTGGAAAAGAACCAGAAAACAAACAAAATCTAAAGCAATTACAAACAAAGGAGCACGCCCAAGAAACTAAAAGACCCATCAAACTAAAGCTCAACTCCAAAGCAAACTCCAACCGTACAGTTGAACATAAGAATAGAAAAGAGCCAAACAAGAGAGCTAAGACCTCCTCCAAAAATCAATAATCCAACTGAGAAACTTCAAGAGCGAAAGCCCCAAAACCCAAACTACCAAAATAGAATGCAAAGATTCTTATATTAATGAAGCTTTACATTAATCTCCTGTAAACCAGGAAAAGTTGATAGAAATAAGATTCTTATATCCTATTTCTTTTTTCAAATAACAATATATTTTCTTCGGTCTTTTCCGGGATGCTACAGGGATTGATTATTGAGTACCATTTAAGATCTATATAATGGCTTGGATCCAAGTGCTTTTGCAAGTTCTAGTGCCTGTGACCAATGAAATTTTGAAACTTTGTGCAGCTATTTGATACATGGAAGAGCATTGAGGGATCGCGGATCAATGAAAGTAACTATGAGAAAGTAATAGTTCTATTGAGTCAAGATGGTCTTATGGAGGATGCTGTATCATCATTTCAAGATATGAAAAGTATTGGCCTTCGACCATCTTTAGGTACTTACAATTCGCTCATCCATGGTTTTGCTGCAAGGGGCAAGTTTGAAATTGCTTTGCTTTTCATTGATGAGATGAAAGAAATCAATATGACTCGAGAAGCTGATACCTATGATGGCCTAATTGAAGCCTATGGAAAATATAGAATGTACGATGAGATGATCGAGTGTCTGAAACAGATGGAACTGGATGGATGTATTCCGGACCACATAACTTACAATTTGCTTATCAGAGAGTTCTCCAAAGGTGGTTTGCTTAAAAAGATGGAAGGATTATACCGAAGCATTCTTTCAAAAAGAATGGATTTACAGTCATCTACCTTGGTTGCCATGTTGGAAGCTTATGCCAAATTTGGTATCTTGGACAAAATGGAAATGTTCTACAGAAGGATCCTGAACTCAAAGACCAATATGAAGGAGGATCTAATCAGAACGTTGGCTCTAGTTTATATTCAGAACCATATGTATTCAAGAATAGAGACCTTGGGTATCGATCTTCACATCAAAGCTGGGAAGACAGATCTTGTTTGGTGCCTGCTTCTTCTATCACATGCTTGTCTATCAAGTCGAAGGGGTATGGACTCTGTTGTTCAGGAAATGGACAAAGCTAACGAAATTTGGAATGCGACTGTTGCAAACATTTTACTTCTAGCTTATTTGAAAATGAAAGATTTTAAACGGCTCAGAACACTGTTCTCTGAAATACGAGCAAGACATGTGAAACCTGATATAGTAACCATTGGAATTCTATTAGATGCAAATAACAAAAGTTTTGATGGAACCAGAATTTTAGAGGCATGGAAAAGGATGAACTTGCTATCCAGAGCTGTGGAAATAAACACCGACTCGCTTGTTTTAGCTGCATTTGGAAAAGGGAGGTTCCTTAAAGACTGTGAAGAGGCATACGCTTCCCTGGAACTTGTGGGTAGGGAAAGTAAAGTTTGGACTTATGAAGAACTCATTGATCTAGTTTATGAAAACCAGGGGGGAATGGGACTGAAAACCAGATAA

mRNA sequence

ATGGAAACTTGTGTTCTCCATTGTTGTTACGACCCCTTCCGACTCCGATCCAAACACCCTTCTTCTCCACACCCTTCTTCTCCACACCCTTTTGACCTTAATAAAGGCAGCAGCTGCCTCTCCTCCAGAATCCCACTCCCAGAGCCCTACACCAAGCTTCTTCTATCCCTACCCACTCGCGCAGTTCCAACGCATAGTCCTACAAAGCATGCGACTCTATTAGTCGACACTTTTCACGAACACCATACCCTAAAAGCTTTGCTCTCCGACCTCCAGAAAAGGGGTTCCTGTCCTTTGCTATTACTTAGACAACATGGAGATTGGAACAGAGACCATTTCTGGCTCGTTGTTAAATTCCTCAGAAATGCTTCAAGATCCCATGAAGTCCTTAAGCTATTTGATACATGGAAGAGCATTGAGGGATCGCGGATCAATGAAAGTAACTATGAGAAAGTAATAGTTCTATTGAGTCAAGATGGTCTTATGGAGGATGCTGTATCATCATTTCAAGATATGAAAAGTATTGGCCTTCGACCATCTTTAGGTACTTACAATTCGCTCATCCATGGTTTTGCTGCAAGGGGCAAGTTTGAAATTGCTTTGCTTTTCATTGATGAGATGAAAGAAATCAATATGACTCGAGAAGCTGATACCTATGATGGCCTAATTGAAGCCTATGGAAAATATAGAATGTACGATGAGATGATCGAGTGTCTGAAACAGATGGAACTGGATGGATGTATTCCGGACCACATAACTTACAATTTGCTTATCAGAGAGTTCTCCAAAGGTGGTTTGCTTAAAAAGATGGAAGGATTATACCGAAGCATTCTTTCAAAAAGAATGGATTTACAGTCATCTACCTTGGTTGCCATGTTGGAAGCTTATGCCAAATTTGGTATCTTGGACAAAATGGAAATGTTCTACAGAAGGATCCTGAACTCAAAGACCAATATGAAGGAGGATCTAATCAGAACGTTGGCTCTAGTTTATATTCAGAACCATATGTATTCAAGAATAGAGACCTTGGGTATCGATCTTCACATCAAAGCTGGGAAGACAGATCTTGTTTGGTGCCTGCTTCTTCTATCACATGCTTGTCTATCAAGTCGAAGGGGTATGGACTCTGTTGTTCAGGAAATGGACAAAGCTAACGAAATTTGGAATGCGACTGTTGCAAACATTTTACTTCTAGCTTATTTGAAAATGAAAGATTTTAAACGGCTCAGAACACTGTTCTCTGAAATACGAGCAAGACATGTGAAACCTGATATAGTAACCATTGGAATTCTATTAGATGCAAATAACAAAAGTTTTGATGGAACCAGAATTTTAGAGGCATGGAAAAGGATGAACTTGCTATCCAGAGCTGTGGAAATAAACACCGACTCGCTTGTTTTAGCTGCATTTGGAAAAGGGAGGTTCCTTAAAGACTGTGAAGAGGCATACGCTTCCCTGGAACTTGTGGGTAGGGAAAGTAAAGTTTGGACTTATGAAGAACTCATTGATCTAGTTTATGAAAACCAGGGGGGAATGGGACTGAAAACCAGATAA

Coding sequence (CDS)

ATGGAAACTTGTGTTCTCCATTGTTGTTACGACCCCTTCCGACTCCGATCCAAACACCCTTCTTCTCCACACCCTTCTTCTCCACACCCTTTTGACCTTAATAAAGGCAGCAGCTGCCTCTCCTCCAGAATCCCACTCCCAGAGCCCTACACCAAGCTTCTTCTATCCCTACCCACTCGCGCAGTTCCAACGCATAGTCCTACAAAGCATGCGACTCTATTAGTCGACACTTTTCACGAACACCATACCCTAAAAGCTTTGCTCTCCGACCTCCAGAAAAGGGGTTCCTGTCCTTTGCTATTACTTAGACAACATGGAGATTGGAACAGAGACCATTTCTGGCTCGTTGTTAAATTCCTCAGAAATGCTTCAAGATCCCATGAAGTCCTTAAGCTATTTGATACATGGAAGAGCATTGAGGGATCGCGGATCAATGAAAGTAACTATGAGAAAGTAATAGTTCTATTGAGTCAAGATGGTCTTATGGAGGATGCTGTATCATCATTTCAAGATATGAAAAGTATTGGCCTTCGACCATCTTTAGGTACTTACAATTCGCTCATCCATGGTTTTGCTGCAAGGGGCAAGTTTGAAATTGCTTTGCTTTTCATTGATGAGATGAAAGAAATCAATATGACTCGAGAAGCTGATACCTATGATGGCCTAATTGAAGCCTATGGAAAATATAGAATGTACGATGAGATGATCGAGTGTCTGAAACAGATGGAACTGGATGGATGTATTCCGGACCACATAACTTACAATTTGCTTATCAGAGAGTTCTCCAAAGGTGGTTTGCTTAAAAAGATGGAAGGATTATACCGAAGCATTCTTTCAAAAAGAATGGATTTACAGTCATCTACCTTGGTTGCCATGTTGGAAGCTTATGCCAAATTTGGTATCTTGGACAAAATGGAAATGTTCTACAGAAGGATCCTGAACTCAAAGACCAATATGAAGGAGGATCTAATCAGAACGTTGGCTCTAGTTTATATTCAGAACCATATGTATTCAAGAATAGAGACCTTGGGTATCGATCTTCACATCAAAGCTGGGAAGACAGATCTTGTTTGGTGCCTGCTTCTTCTATCACATGCTTGTCTATCAAGTCGAAGGGGTATGGACTCTGTTGTTCAGGAAATGGACAAAGCTAACGAAATTTGGAATGCGACTGTTGCAAACATTTTACTTCTAGCTTATTTGAAAATGAAAGATTTTAAACGGCTCAGAACACTGTTCTCTGAAATACGAGCAAGACATGTGAAACCTGATATAGTAACCATTGGAATTCTATTAGATGCAAATAACAAAAGTTTTGATGGAACCAGAATTTTAGAGGCATGGAAAAGGATGAACTTGCTATCCAGAGCTGTGGAAATAAACACCGACTCGCTTGTTTTAGCTGCATTTGGAAAAGGGAGGTTCCTTAAAGACTGTGAAGAGGCATACGCTTCCCTGGAACTTGTGGGTAGGGAAAGTAAAGTTTGGACTTATGAAGAACTCATTGATCTAGTTTATGAAAACCAGGGGGGAATGGGACTGAAAACCAGATAA

Protein sequence

METCVLHCCYDPFRLRSKHPSSPHPSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRGSCPLLLLRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIALLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWKRMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR
Homology
BLAST of Carg04926 vs. NCBI nr
Match: KAG7025298.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1040.0 bits (2688), Expect = 6.7e-300
Identity = 517/517 (100.00%), Postives = 517/517 (100.00%), Query Frame = 0

Query: 1   METCVLHCCYDPFRLRSKHPSSPHPSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR 60
           METCVLHCCYDPFRLRSKHPSSPHPSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR
Sbjct: 1   METCVLHCCYDPFRLRSKHPSSPHPSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR 60

Query: 61  AVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRGSCPLLLLRQHGDWNRDHFWLVVKFL 120
           AVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRGSCPLLLLRQHGDWNRDHFWLVVKFL
Sbjct: 61  AVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRGSCPLLLLRQHGDWNRDHFWLVVKFL 120

Query: 121 RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS 180
           RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS
Sbjct: 121 RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS 180

Query: 181 LGTYNSLIHGFAARGKFEIALLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK 240
           LGTYNSLIHGFAARGKFEIALLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK
Sbjct: 181 LGTYNSLIHGFAARGKFEIALLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK 240

Query: 241 QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG 300
           QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG
Sbjct: 241 QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG 300

Query: 301 ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL 360
           ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL
Sbjct: 301 ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL 360

Query: 361 LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH 420
           LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH
Sbjct: 361 LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH 420

Query: 421 VKPDIVTIGILLDANNKSFDGTRILEAWKRMNLLSRAVEINTDSLVLAAFGKGRFLKDCE 480
           VKPDIVTIGILLDANNKSFDGTRILEAWKRMNLLSRAVEINTDSLVLAAFGKGRFLKDCE
Sbjct: 421 VKPDIVTIGILLDANNKSFDGTRILEAWKRMNLLSRAVEINTDSLVLAAFGKGRFLKDCE 480

Query: 481 EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR 518
           EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR
Sbjct: 481 EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR 517

BLAST of Carg04926 vs. NCBI nr
Match: KAG6592896.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1023.1 bits (2644), Expect = 8.5e-295
Identity = 512/517 (99.03%), Postives = 512/517 (99.03%), Query Frame = 0

Query: 1   METCVLHCCYDPFRLRSKHPSSPHPSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR 60
           METCVLHCCYDPFRLRSK     HPSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR
Sbjct: 1   METCVLHCCYDPFRLRSK-----HPSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR 60

Query: 61  AVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRGSCPLLLLRQHGDWNRDHFWLVVKFL 120
           AVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRGSCPLLLLRQHGDWNRDHFWLVVKFL
Sbjct: 61  AVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRGSCPLLLLRQHGDWNRDHFWLVVKFL 120

Query: 121 RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS 180
           RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS
Sbjct: 121 RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS 180

Query: 181 LGTYNSLIHGFAARGKFEIALLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK 240
           LGTYNSLIHGFAARGKFEIALLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK
Sbjct: 181 LGTYNSLIHGFAARGKFEIALLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK 240

Query: 241 QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG 300
           QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG
Sbjct: 241 QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG 300

Query: 301 ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL 360
           ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL
Sbjct: 301 ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL 360

Query: 361 LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH 420
           LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH
Sbjct: 361 LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH 420

Query: 421 VKPDIVTIGILLDANNKSFDGTRILEAWKRMNLLSRAVEINTDSLVLAAFGKGRFLKDCE 480
           VKPDIVTIGILLDANNKSFDGTRILEAWKRMNLLSRAVEINTDSLVLAAFGKGRFLKDCE
Sbjct: 421 VKPDIVTIGILLDANNKSFDGTRILEAWKRMNLLSRAVEINTDSLVLAAFGKGRFLKDCE 480

Query: 481 EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR 518
           EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR
Sbjct: 481 EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR 512

BLAST of Carg04926 vs. NCBI nr
Match: XP_022959989.1 (pentatricopeptide repeat-containing protein At4g14190, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1016.1 bits (2626), Expect = 1.0e-292
Identity = 508/517 (98.26%), Postives = 511/517 (98.84%), Query Frame = 0

Query: 1   METCVLHCCYDPFRLRSKHPSSPHPSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR 60
           METCVLHCCYDPFRLRSKHPS    SSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR
Sbjct: 5   METCVLHCCYDPFRLRSKHPS----SSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR 64

Query: 61  AVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRGSCPLLLLRQHGDWNRDHFWLVVKFL 120
           AVPTHSPTKHATLLVDTFHEH TLKALLSDLQKR SCPLLLLRQHGDWNRDHFWLVVKFL
Sbjct: 65  AVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDHFWLVVKFL 124

Query: 121 RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS 180
           RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS
Sbjct: 125 RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS 184

Query: 181 LGTYNSLIHGFAARGKFEIALLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK 240
           LGTYNSLIHGFAARGKFEIA+LFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK
Sbjct: 185 LGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK 244

Query: 241 QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG 300
           QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG
Sbjct: 245 QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG 304

Query: 301 ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL 360
           ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL
Sbjct: 305 ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL 364

Query: 361 LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH 420
           LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH
Sbjct: 365 LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH 424

Query: 421 VKPDIVTIGILLDANNKSFDGTRILEAWKRMNLLSRAVEINTDSLVLAAFGKGRFLKDCE 480
           VKPDIVTIGILLDANNKSFDGTRILEAW++MNLLSRAVEINTDSLVLAAFGKGRFLKDCE
Sbjct: 425 VKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCE 484

Query: 481 EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR 518
           EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR
Sbjct: 485 EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR 517

BLAST of Carg04926 vs. NCBI nr
Match: XP_023514113.1 (pentatricopeptide repeat-containing protein At4g14190, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 999.2 bits (2582), Expect = 1.3e-287
Identity = 496/517 (95.94%), Postives = 505/517 (97.68%), Query Frame = 0

Query: 1   METCVLHCCYDPFRLRSKHPSSPHPSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR 60
           METCVLHCCYDPFRLRSKHPS    SSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR
Sbjct: 5   METCVLHCCYDPFRLRSKHPS----SSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR 64

Query: 61  AVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRGSCPLLLLRQHGDWNRDHFWLVVKFL 120
           AVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKR SCPLLLLR HGDWNRDHFWLVVKFL
Sbjct: 65  AVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRDSCPLLLLRHHGDWNRDHFWLVVKFL 124

Query: 121 RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS 180
           RNASRSHE+LKLFDTWKSIEGSRI+ESNYEKVIVLLSQDGLMEDAVS+FQDMKS+GLRPS
Sbjct: 125 RNASRSHEILKLFDTWKSIEGSRISESNYEKVIVLLSQDGLMEDAVSAFQDMKSLGLRPS 184

Query: 181 LGTYNSLIHGFAARGKFEIALLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK 240
           LGTYN+LIHGFAARGKFEIA+LFIDEMKEINMTRE DTYDGLIEAYGKYRMYDEMIECLK
Sbjct: 185 LGTYNTLIHGFAARGKFEIAMLFIDEMKEINMTRETDTYDGLIEAYGKYRMYDEMIECLK 244

Query: 241 QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG 300
           QMELDGC PDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG
Sbjct: 245 QMELDGCFPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG 304

Query: 301 ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL 360
           ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL
Sbjct: 305 ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL 364

Query: 361 LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH 420
           LLLSHACLSSRRGMDSVVQEMDKA EIWN TVANILLLAYLKMKDFKRLRTLFSEIRARH
Sbjct: 365 LLLSHACLSSRRGMDSVVQEMDKAKEIWNVTVANILLLAYLKMKDFKRLRTLFSEIRARH 424

Query: 421 VKPDIVTIGILLDANNKSFDGTRILEAWKRMNLLSRAVEINTDSLVLAAFGKGRFLKDCE 480
           VKPD+VTIGILLDANNKSFDGTR LEAW+RMN+LSRAVEINTDSLVLAAFGKGRFLKDCE
Sbjct: 425 VKPDLVTIGILLDANNKSFDGTRTLEAWRRMNMLSRAVEINTDSLVLAAFGKGRFLKDCE 484

Query: 481 EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR 518
           EAYASLELVGRESKVWTYEELIDLVYENQGGM LKTR
Sbjct: 485 EAYASLELVGRESKVWTYEELIDLVYENQGGMVLKTR 517

BLAST of Carg04926 vs. NCBI nr
Match: XP_023004999.1 (pentatricopeptide repeat-containing protein At4g14190, chloroplastic [Cucurbita maxima])

HSP 1 Score: 986.9 bits (2550), Expect = 6.7e-284
Identity = 493/517 (95.36%), Postives = 502/517 (97.10%), Query Frame = 0

Query: 1   METCVLHCCYDPFRLRSKHPSSPHPSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR 60
           METCVLHCCYDPFRLR KH SS   SS HPFDLNKGSSCL SRIPLPEPYTKLLLSLPTR
Sbjct: 5   METCVLHCCYDPFRLRFKH-SSSSSSSSHPFDLNKGSSCLYSRIPLPEPYTKLLLSLPTR 64

Query: 61  AVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRGSCPLLLLRQHGDWNRDHFWLVVKFL 120
           AVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKR SCPLLLL+ HGDWNRDHFWLVVKFL
Sbjct: 65  AVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRDSCPLLLLKHHGDWNRDHFWLVVKFL 124

Query: 121 RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS 180
           RNASRSHE+LKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVS+FQDMKSIGLRPS
Sbjct: 125 RNASRSHEILKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSAFQDMKSIGLRPS 184

Query: 181 LGTYNSLIHGFAARGKFEIALLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK 240
           LGTYNSLIHGFAARGKFEIA+LFIDEMKEINM READTYDGLIEAYGKYRMYDEMIECLK
Sbjct: 185 LGTYNSLIHGFAARGKFEIAMLFIDEMKEINMIREADTYDGLIEAYGKYRMYDEMIECLK 244

Query: 241 QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG 300
           QMELDGC PDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG
Sbjct: 245 QMELDGCFPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG 304

Query: 301 ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL 360
           ILDKMEMFYRRIL+SKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL
Sbjct: 305 ILDKMEMFYRRILDSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL 364

Query: 361 LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH 420
           LLLSHACLSSRRGMDSVVQEMDKANE WN TVANILLLAYL+MKDFKRLRTLFSEIRAR 
Sbjct: 365 LLLSHACLSSRRGMDSVVQEMDKANETWNVTVANILLLAYLRMKDFKRLRTLFSEIRARR 424

Query: 421 VKPDIVTIGILLDANNKSFDGTRILEAWKRMNLLSRAVEINTDSLVLAAFGKGRFLKDCE 480
           VKPDIVTIGILLDANNKSFDGTRILEAW+RMNLLSRAVEINTDSLVLAAFGKGRFLKDCE
Sbjct: 425 VKPDIVTIGILLDANNKSFDGTRILEAWRRMNLLSRAVEINTDSLVLAAFGKGRFLKDCE 484

Query: 481 EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR 518
           EAYASLEL+GRE+KVWTYEELIDLV ENQGGMGLKTR
Sbjct: 485 EAYASLELMGRENKVWTYEELIDLVCENQGGMGLKTR 520

BLAST of Carg04926 vs. ExPASy Swiss-Prot
Match: O23278 (Pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g14190 PE=2 SV=2)

HSP 1 Score: 463.8 bits (1192), Expect = 2.6e-129
Identity = 239/485 (49.28%), Postives = 332/485 (68.45%), Query Frame = 0

Query: 28  PHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHHTLKAL 87
           P P++LN  S   S+   +P P + L  SLP       S    AT      H H  L +L
Sbjct: 21  PPPWNLN-SSFLTSTSYSIPRP-SSLRRSLPL------SINGDATQPTSLLHHHRFLSSL 80

Query: 88  LSDLQKRGSCPLLLLRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINES 147
              L   GSCPL LL++ GDW++DHFW V++FLR +SR HE+L +FDTWK++E SRI+E+
Sbjct: 81  TRRLSLSGSCPLRLLQEDGDWSKDHFWAVIRFLRQSSRLHEILPVFDTWKNLEPSRISEN 140

Query: 148 NYEKVIVLLSQDGLMEDAVSSFQDM-KSIGLRPSLGTYNSLIHGFAARGKFEIALLFIDE 207
           NYE++I  L ++  M +A+ +F+ M     L PSL  YNS+IH +A  GKFE A+ +++ 
Sbjct: 141 NYERIIRFLCEEKSMSEAIRAFRSMIDDHELSPSLEIYNSIIHSYADDGKFEEAMFYLNH 200

Query: 208 MKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGL 267
           MKE  +    +TYDGLIEAYGK++MYDE++ CLK+ME DGC+ DH+TYNLLIREFS+GGL
Sbjct: 201 MKENGLLPITETYDGLIEAYGKWKMYDEIVLCLKRMESDGCVRDHVTYNLLIREFSRGGL 260

Query: 268 LKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRT 327
           LK+ME +Y+S++S++M L+ STL++MLEAYA+FG+++KME    +I+    ++ E L+R 
Sbjct: 261 LKRMEQMYQSLMSRKMTLEPSTLLSMLEAYAEFGLIEKMEETCNKIIRFGISLDEGLVRK 320

Query: 328 LALVYIQNHMYSRIETLGIDLHI-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKAN 387
           LA VYI+N M+SR++ LG  +   +  +T+L WCL LL HA L SR+G+D VV+EM++A 
Sbjct: 321 LANVYIENLMFSRLDDLGRGISASRTRRTELAWCLRLLCHARLVSRKGLDYVVKEMEEAR 380

Query: 388 EIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRIL 447
             WN T ANI LLAY KM DF  +  L SE+R +HVK D+VT+GI+ D +   FDGT + 
Sbjct: 381 VPWNTTFANIALLAYSKMGDFTSIELLLSELRIKHVKLDLVTVGIVFDLSEARFDGTGVF 440

Query: 448 EAWKRMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEA-YASLELVGRESKVWTYEELIDL 507
             WK++  L + VE+ TD LV AAFGKG+FL+ CEE    SL     ESK WTY+ L++L
Sbjct: 441 MTWKKIGFLDKPVEMKTDPLVHAAFGKGQFLRSCEEVKNQSLGTRDGESKSWTYQYLMEL 497

Query: 508 VYENQ 510
           V +NQ
Sbjct: 501 VVKNQ 497

BLAST of Carg04926 vs. ExPASy Swiss-Prot
Match: Q9M2A1 (Pentatricopeptide repeat-containing protein At3g42630 OS=Arabidopsis thaliana OX=3702 GN=At3g42630 PE=2 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 1.6e-25
Identity = 102/361 (28.25%), Postives = 163/361 (45.15%), Query Frame = 0

Query: 143 RINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIALL 202
           +I   +Y  ++  LSQ  L + A   F   KS+ L P+  T  +L+  FA  G    A  
Sbjct: 44  KIQIVDYAPLVQTLSQRRLPDVAHEIFLQTKSVNLLPNYRTLCALMLCFAENGFVLRART 103

Query: 203 FIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFS 262
             DE+       +      LI AY ++  +DE+ +  K +         +  +L I  F 
Sbjct: 104 IWDEIINSCFVPDVFVVSKLISAYEQFGCFDEVAKITKDVAARHSKLLPVVSSLAISCFG 163

Query: 263 KGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKED 322
           K G L+ MEG+   + SK + L++ T   ++  Y+ FG LDKME  Y R+      ++E+
Sbjct: 164 KNGQLELMEGVIEEMDSKGVLLEAETANVIVRYYSFFGSLDKMEKAYGRVKKFGIVIEEE 223

Query: 323 LIRTLALVYIQNHMYSRIETLGIDLHI-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEM 382
            IR + L Y++   + R+     D+ + +    +++W  +LLS+A     + +      M
Sbjct: 224 EIRAVVLAYLKQRKFYRLREFLSDVGLGRRNLGNMLWNSVLLSYAADFKMKSLQREFIGM 283

Query: 383 DKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDG 442
             A    + T  NI  LA+ +M  F  L      +R  ++ PD+VT G ++DA       
Sbjct: 284 LDAGFSPDLTTFNIRALAFSRMALFWDLHLTLEHMRRLNIVPDLVTFGCVVDAYMDKRLA 343

Query: 443 TRILEAWKRMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEEL 502
             +   + RMNL    + + TD L     GKG F    E   A LE   R  K WTY +L
Sbjct: 344 RNLEFVYNRMNLDDSPL-VLTDPLAFEVLGKGDFHLSSE---AVLEFSPR--KNWTYRKL 398

BLAST of Carg04926 vs. ExPASy Swiss-Prot
Match: P0C7Q7 (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12700 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.1e-22
Identity = 89/365 (24.38%), Postives = 160/365 (43.84%), Query Frame = 0

Query: 141 GSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIA 200
           G   + + +  +I  L  +G + +AV     M   G +P + TYNS+++G    G   +A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212

Query: 201 LLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIRE 260
           L  + +M+E N+  +  TY  +I++  +    D  I   K+ME  G     +TYN L+R 
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272

Query: 261 FSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMK 320
             K G       L + ++S+ +     T   +L+ + K G L +    Y+ ++    +  
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332

Query: 321 EDLIRTLALVYIQNHMYSRIETLGIDLHIK-AGKTDLVWCLLLLSHACLSSR--RGMDSV 380
                TL   Y   +  S    + +DL ++     D+V    L+   C+  R   GM  V
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNM-LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM-KV 392

Query: 381 VQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNK 440
            + + K   + NA   +IL+  + +    K    LF E+ +  V PD++T GILLD    
Sbjct: 393 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 452

Query: 441 SFDGTRILEAWKRMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWT 500
           +    + LE ++ +      + I   + ++    KG  ++D    + SL   G +  V T
Sbjct: 453 NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 512

Query: 501 YEELI 503
           Y  +I
Sbjct: 513 YTVMI 515

BLAST of Carg04926 vs. ExPASy Swiss-Prot
Match: Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.8e-21
Identity = 65/285 (22.81%), Postives = 132/285 (46.32%), Query Frame = 0

Query: 149 YEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIALLFIDEMK 208
           Y  +I   ++DG++++A+     M   G +P + TY +L+ GF   GK E A+   +EM+
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411

Query: 209 EINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLK 268
                    T++  I+ YG    + EM++   ++ + G  PD +T+N L+  F + G+  
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471

Query: 269 KMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLA 328
           ++ G+++ +       +  T   ++ AY++ G  ++    YRR+L++          T+ 
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531

Query: 329 LVYIQNHMYSRIETLGIDLHI-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEI 388
               +  M+ + E +  ++   +    +L +C LL ++A       M S+ +E+      
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE 591

Query: 389 WNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILL 433
             A +   L+L   K          FSE++ R   PDI T+  ++
Sbjct: 592 PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMV 636

BLAST of Carg04926 vs. ExPASy Swiss-Prot
Match: Q9FMD3 (Pentatricopeptide repeat-containing protein At5g16640, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g16640 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.9e-19
Identity = 83/350 (23.71%), Postives = 153/350 (43.71%), Query Frame = 0

Query: 165 AVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIALLFIDEMKEINMTREADTYDGLIE 224
           A+S    M  +G  PS+ T+ SL++GF    +   AL   D+M  +        Y+ +I+
Sbjct: 135 ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIID 194

Query: 225 AYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDL 284
              K +  D  ++ L +ME DG  PD +TYN LI      G       +   +  + +  
Sbjct: 195 GLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP 254

Query: 285 QSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLG 344
              T  A+++A  K G + + E FY  ++  + ++  D++ T +L+     MYSR++   
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMI--RRSLDPDIV-TYSLLIYGLCMYSRLDEAE 314

Query: 345 IDLHIKAGK---TDLVWCLLLLSHACLSSR--RGMDSVVQEMDKANEIWNATVANILLLA 404
                   K    D+V   +L++  C S +   GM  +  EM +   + N     IL+  
Sbjct: 315 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM-KLFCEMSQRGVVRNTVTYTILIQG 374

Query: 405 YLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLD--ANNKSFDGTRILEAWKRMNLLSRA 464
           Y +         +F  +    V P+I+T  +LL    +N   +   ++ A  + N +   
Sbjct: 375 YCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD-- 434

Query: 465 VEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELIDLVYE 508
            +I T ++++    K   + D  + Y SL   G    +WTY  ++  +Y+
Sbjct: 435 ADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYK 478

BLAST of Carg04926 vs. ExPASy TrEMBL
Match: A0A6J1H9M9 (pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111460878 PE=3 SV=1)

HSP 1 Score: 1016.1 bits (2626), Expect = 5.0e-293
Identity = 508/517 (98.26%), Postives = 511/517 (98.84%), Query Frame = 0

Query: 1   METCVLHCCYDPFRLRSKHPSSPHPSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR 60
           METCVLHCCYDPFRLRSKHPS    SSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR
Sbjct: 5   METCVLHCCYDPFRLRSKHPS----SSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR 64

Query: 61  AVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRGSCPLLLLRQHGDWNRDHFWLVVKFL 120
           AVPTHSPTKHATLLVDTFHEH TLKALLSDLQKR SCPLLLLRQHGDWNRDHFWLVVKFL
Sbjct: 65  AVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDHFWLVVKFL 124

Query: 121 RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS 180
           RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS
Sbjct: 125 RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS 184

Query: 181 LGTYNSLIHGFAARGKFEIALLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK 240
           LGTYNSLIHGFAARGKFEIA+LFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK
Sbjct: 185 LGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK 244

Query: 241 QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG 300
           QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG
Sbjct: 245 QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG 304

Query: 301 ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL 360
           ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL
Sbjct: 305 ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL 364

Query: 361 LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH 420
           LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH
Sbjct: 365 LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH 424

Query: 421 VKPDIVTIGILLDANNKSFDGTRILEAWKRMNLLSRAVEINTDSLVLAAFGKGRFLKDCE 480
           VKPDIVTIGILLDANNKSFDGTRILEAW++MNLLSRAVEINTDSLVLAAFGKGRFLKDCE
Sbjct: 425 VKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCE 484

Query: 481 EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR 518
           EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR
Sbjct: 485 EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR 517

BLAST of Carg04926 vs. ExPASy TrEMBL
Match: A0A6J1KXW9 (pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111498121 PE=3 SV=1)

HSP 1 Score: 986.9 bits (2550), Expect = 3.3e-284
Identity = 493/517 (95.36%), Postives = 502/517 (97.10%), Query Frame = 0

Query: 1   METCVLHCCYDPFRLRSKHPSSPHPSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR 60
           METCVLHCCYDPFRLR KH SS   SS HPFDLNKGSSCL SRIPLPEPYTKLLLSLPTR
Sbjct: 5   METCVLHCCYDPFRLRFKH-SSSSSSSSHPFDLNKGSSCLYSRIPLPEPYTKLLLSLPTR 64

Query: 61  AVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRGSCPLLLLRQHGDWNRDHFWLVVKFL 120
           AVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKR SCPLLLL+ HGDWNRDHFWLVVKFL
Sbjct: 65  AVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRDSCPLLLLKHHGDWNRDHFWLVVKFL 124

Query: 121 RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS 180
           RNASRSHE+LKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVS+FQDMKSIGLRPS
Sbjct: 125 RNASRSHEILKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSAFQDMKSIGLRPS 184

Query: 181 LGTYNSLIHGFAARGKFEIALLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK 240
           LGTYNSLIHGFAARGKFEIA+LFIDEMKEINM READTYDGLIEAYGKYRMYDEMIECLK
Sbjct: 185 LGTYNSLIHGFAARGKFEIAMLFIDEMKEINMIREADTYDGLIEAYGKYRMYDEMIECLK 244

Query: 241 QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG 300
           QMELDGC PDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG
Sbjct: 245 QMELDGCFPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG 304

Query: 301 ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL 360
           ILDKMEMFYRRIL+SKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL
Sbjct: 305 ILDKMEMFYRRILDSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL 364

Query: 361 LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH 420
           LLLSHACLSSRRGMDSVVQEMDKANE WN TVANILLLAYL+MKDFKRLRTLFSEIRAR 
Sbjct: 365 LLLSHACLSSRRGMDSVVQEMDKANETWNVTVANILLLAYLRMKDFKRLRTLFSEIRARR 424

Query: 421 VKPDIVTIGILLDANNKSFDGTRILEAWKRMNLLSRAVEINTDSLVLAAFGKGRFLKDCE 480
           VKPDIVTIGILLDANNKSFDGTRILEAW+RMNLLSRAVEINTDSLVLAAFGKGRFLKDCE
Sbjct: 425 VKPDIVTIGILLDANNKSFDGTRILEAWRRMNLLSRAVEINTDSLVLAAFGKGRFLKDCE 484

Query: 481 EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR 518
           EAYASLEL+GRE+KVWTYEELIDLV ENQGGMGLKTR
Sbjct: 485 EAYASLELMGRENKVWTYEELIDLVCENQGGMGLKTR 520

BLAST of Carg04926 vs. ExPASy TrEMBL
Match: A0A6J1DBE2 (pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111018567 PE=3 SV=1)

HSP 1 Score: 785.4 bits (2027), Expect = 1.4e-223
Identity = 405/526 (77.00%), Postives = 450/526 (85.55%), Query Frame = 0

Query: 1   METCVLHCCYD--------PFRLRSKHPSSPHPSSPHPFDLNKGSSCLSSRIPLPEPYTK 60
           METCVLH  YD         FRL+  + SS   SS +PF LNK   C+ S+ P P+P   
Sbjct: 1   METCVLH-GYDSIGCGSKLAFRLQFPYYSS---SSSYPFYLNK-IRCVPSKNPTPQP--- 60

Query: 61  LLLSLPTR-AVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRGSCPLLLLRQHGDWNRD 120
            LLSL T  AVPTHSPTKHATLL+DTFH+HH LK LLS L K  SCPLLLL  HGDW+ D
Sbjct: 61  -LLSLTTSCAVPTHSPTKHATLLLDTFHQHHALKTLLSHLHKTDSCPLLLLTHHGDWSTD 120

Query: 121 HFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQD 180
           HFW+VVKFL  ASRSH++LKLFD WK+IE SRINESNYEKVIVLLS+DGLM+DA+S+FQD
Sbjct: 121 HFWVVVKFLTQASRSHQLLKLFDAWKNIERSRINESNYEKVIVLLSRDGLMDDAMSAFQD 180

Query: 181 MKSIGLRPSLGTYNSLIHGFAARGKFEIALLFIDEMKEINMTREADTYDGLIEAYGKYRM 240
           MKSIGL+PSLG YNSLIHGFAA+G+FE A+ F++EMK+INMTRE DTYDGLIEAYGKYRM
Sbjct: 181 MKSIGLQPSLGIYNSLIHGFAAKGEFETAMFFVNEMKDINMTREPDTYDGLIEAYGKYRM 240

Query: 241 YDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVA 300
           YDEM++CLKQMELDGC PD ITYNLLIREFSKGGLLKKMEGLY+++LSKRMDLQSSTLVA
Sbjct: 241 YDEMVKCLKQMELDGCFPDQITYNLLIREFSKGGLLKKMEGLYQTMLSKRMDLQSSTLVA 300

Query: 301 MLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKA 360
           MLEAY KFGILDKMEMFYRRILNS+TN+KEDLIR LALV I+N MYSR+ETLG+D++IK 
Sbjct: 301 MLEAYTKFGILDKMEMFYRRILNSRTNLKEDLIRKLALVCIKNFMYSRLETLGVDVYIKI 360

Query: 361 GKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRT 420
           GKTDLVWCL LLSHACLSSRRGMDSVVQEMDKANEIWN TVANI+LLAYLKMKDFKRLR 
Sbjct: 361 GKTDLVWCLRLLSHACLSSRRGMDSVVQEMDKANEIWNVTVANIILLAYLKMKDFKRLRM 420

Query: 421 LFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWKRMNLLSRAVEINTDSLVLAAFG 480
            FSE+R RHVKPDIVTIGILLDANNK  +GT  LEAW+RMNLLSRAVE+NTDSLVLAAFG
Sbjct: 421 SFSEMRERHVKPDIVTIGILLDANNKGLNGTGTLEAWRRMNLLSRAVEMNTDSLVLAAFG 480

Query: 481 KGRFLKDCEEAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR 518
           KG FLK CEE YA+LE   RE+K+WTYE LIDLV E +G  GLKTR
Sbjct: 481 KGNFLKKCEETYAALEPKDRENKIWTYEGLIDLVLE-KGETGLKTR 516

BLAST of Carg04926 vs. ExPASy TrEMBL
Match: A0A5C7IV15 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_001518 PE=4 SV=1)

HSP 1 Score: 597.8 bits (1540), Expect = 4.3e-167
Identity = 290/487 (59.55%), Postives = 377/487 (77.41%), Query Frame = 0

Query: 25  PSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSL---PTRAVPTHSPTKHATLLVDTFHEH 84
           PS    F+ N      SS+  + +P     LS    P+   P H+P+KH TLLV+T+HEH
Sbjct: 16  PSPSWRFNSNINDHVFSSKTLITKPIAFSSLSSLQHPSAPPPLHNPSKHTTLLVETYHEH 75

Query: 85  HTLKALLSDLQKRGSCPLLLLRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEG 144
           HTL+AL+  LQ   SCPLL+L   GDW +D FW V+KFL+NASRS ++L++FD WK+IE 
Sbjct: 76  HTLRALIQRLQHEHSCPLLILEHDGDWTKDQFWAVIKFLKNASRSTQILQVFDMWKNIEK 135

Query: 145 SRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAL 204
           SRINE NY+K+IV+L ++GLME+AV+S Q+MK+ GLRP L  YNS+IHG++  GKF+ AL
Sbjct: 136 SRINEFNYKKIIVVLGEEGLMEEAVNSLQEMKAHGLRPCLQIYNSIIHGYSRNGKFDEAL 195

Query: 205 LFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREF 264
           LF++EMKEIN+ R  DTY GLI+AYGK++MYDE+  CLK+M+LDGC PD+ITYNLLIREF
Sbjct: 196 LFLEEMKEINLARHTDTYGGLIQAYGKHKMYDEISMCLKKMKLDGCSPDYITYNLLIREF 255

Query: 265 SKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKE 324
           ++GGLL++ME L +S+LSKRM LQSSTL AMLE Y KFG+L+KME  Y+R+LNSK  +KE
Sbjct: 256 ARGGLLERMERLQKSMLSKRMHLQSSTLTAMLEVYMKFGLLEKMEKCYKRLLNSKPPLKE 315

Query: 325 DLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEM 384
           DLIR LA VYIQN+M+SR++ LG D+  + G+T+LVWCL LLSHACL SRRGMDSV+QEM
Sbjct: 316 DLIRKLAGVYIQNYMFSRLDDLGDDVASRTGRTELVWCLRLLSHACLLSRRGMDSVIQEM 375

Query: 385 DKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDG 444
           +++   WN +VANI+LLAYLKMKDFK+LR L SE+  R VKPD+VT+G++ DA+   F+ 
Sbjct: 376 EESKVSWNVSVANIILLAYLKMKDFKQLRVLLSELPTRRVKPDLVTVGVVFDASRFGFNE 435

Query: 445 TRILEAWKRMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEEL 504
           T  LE WKRM+LL  +V++ TD LVL A+GKG FL+DCEE + SLE   RE + WTY+ L
Sbjct: 436 TGTLERWKRMDLLYESVKMGTDPLVLIAYGKGHFLRDCEEVFTSLEPYAREKRRWTYQNL 495

Query: 505 IDLVYEN 509
           IDLV ++
Sbjct: 496 IDLVMKH 502

BLAST of Carg04926 vs. ExPASy TrEMBL
Match: A0A067ECN4 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g010459mg PE=4 SV=1)

HSP 1 Score: 582.4 bits (1500), Expect = 1.9e-162
Identity = 275/443 (62.08%), Postives = 353/443 (79.68%), Query Frame = 0

Query: 68  TKHATLLVDTFHEHHTLKALLSDLQKRGSCPLLLLRQHGDWNRDHFWLVVKFLRNASRSH 127
           TKH TLLV+++HEH  L AL+  L K+ SCPL +L+  GDW +DHFW V++FL+N+SRS 
Sbjct: 61  TKHTTLLVESYHEHQALNALIQRLNKKVSCPLQILQHDGDWTKDHFWAVIRFLKNSSRSR 120

Query: 128 EVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSL 187
           ++ ++FD WK+IE SRINE N +K+I +L ++GLME+AV +FQ+M+   L+PSL  YNS+
Sbjct: 121 QIPQVFDMWKNIEKSRINEFNSQKIIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSI 180

Query: 188 IHGFAARGKFEIALLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGC 247
           IHG++  GKF  ALLF++EMKE+N++ ++DTYDGLI+AYGKY+MYDE+  CLK M+LDGC
Sbjct: 181 IHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGC 240

Query: 248 IPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEM 307
            PDHITYNLLI+EF+  GLLK+MEG Y+S+L+KRM L+SST+VA+L+AY  FG+LDKME 
Sbjct: 241 SPDHITYNLLIQEFACAGLLKRMEGTYKSMLTKRMHLRSSTMVAILDAYMNFGMLDKMEK 300

Query: 308 FYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHAC 367
           FY+R+LNS+T +KEDL+R LA VYI+N+M+SR++ LG DL  + G+T+LVWCL LLSHAC
Sbjct: 301 FYKRLLNSRTPLKEDLVRKLAEVYIKNYMFSRLDDLGDDLASRIGRTELVWCLRLLSHAC 360

Query: 368 LSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVT 427
           L S RG+DSVV+EM+ A   WN T ANI+LLAYLKMKDFK LR L SE+  RHVKPDIVT
Sbjct: 361 LLSHRGIDSVVREMESAKVRWNVTTANIILLAYLKMKDFKHLRVLLSELPTRHVKPDIVT 420

Query: 428 IGILLDANNKSFDGTRILEAWKRMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLE 487
           IGIL DA    FDGT  LE WKR+  L + VEINTD LVLA +GKG FL+ CEE Y+SLE
Sbjct: 421 IGILYDARRIGFDGTGALEMWKRIGFLFKTVEINTDPLVLAVYGKGHFLRYCEEVYSSLE 480

Query: 488 LVGRESKVWTYEELIDLVYENQG 511
              RE K WTY+ LIDLV ++ G
Sbjct: 481 PYSREKKRWTYQNLIDLVIKHNG 503

BLAST of Carg04926 vs. TAIR 10
Match: AT4G14190.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 463.8 bits (1192), Expect = 1.8e-130
Identity = 239/485 (49.28%), Postives = 332/485 (68.45%), Query Frame = 0

Query: 28  PHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHHTLKAL 87
           P P++LN  S   S+   +P P + L  SLP       S    AT      H H  L +L
Sbjct: 21  PPPWNLN-SSFLTSTSYSIPRP-SSLRRSLPL------SINGDATQPTSLLHHHRFLSSL 80

Query: 88  LSDLQKRGSCPLLLLRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINES 147
              L   GSCPL LL++ GDW++DHFW V++FLR +SR HE+L +FDTWK++E SRI+E+
Sbjct: 81  TRRLSLSGSCPLRLLQEDGDWSKDHFWAVIRFLRQSSRLHEILPVFDTWKNLEPSRISEN 140

Query: 148 NYEKVIVLLSQDGLMEDAVSSFQDM-KSIGLRPSLGTYNSLIHGFAARGKFEIALLFIDE 207
           NYE++I  L ++  M +A+ +F+ M     L PSL  YNS+IH +A  GKFE A+ +++ 
Sbjct: 141 NYERIIRFLCEEKSMSEAIRAFRSMIDDHELSPSLEIYNSIIHSYADDGKFEEAMFYLNH 200

Query: 208 MKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGL 267
           MKE  +    +TYDGLIEAYGK++MYDE++ CLK+ME DGC+ DH+TYNLLIREFS+GGL
Sbjct: 201 MKENGLLPITETYDGLIEAYGKWKMYDEIVLCLKRMESDGCVRDHVTYNLLIREFSRGGL 260

Query: 268 LKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRT 327
           LK+ME +Y+S++S++M L+ STL++MLEAYA+FG+++KME    +I+    ++ E L+R 
Sbjct: 261 LKRMEQMYQSLMSRKMTLEPSTLLSMLEAYAEFGLIEKMEETCNKIIRFGISLDEGLVRK 320

Query: 328 LALVYIQNHMYSRIETLGIDLHI-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKAN 387
           LA VYI+N M+SR++ LG  +   +  +T+L WCL LL HA L SR+G+D VV+EM++A 
Sbjct: 321 LANVYIENLMFSRLDDLGRGISASRTRRTELAWCLRLLCHARLVSRKGLDYVVKEMEEAR 380

Query: 388 EIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRIL 447
             WN T ANI LLAY KM DF  +  L SE+R +HVK D+VT+GI+ D +   FDGT + 
Sbjct: 381 VPWNTTFANIALLAYSKMGDFTSIELLLSELRIKHVKLDLVTVGIVFDLSEARFDGTGVF 440

Query: 448 EAWKRMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEA-YASLELVGRESKVWTYEELIDL 507
             WK++  L + VE+ TD LV AAFGKG+FL+ CEE    SL     ESK WTY+ L++L
Sbjct: 441 MTWKKIGFLDKPVEMKTDPLVHAAFGKGQFLRSCEEVKNQSLGTRDGESKSWTYQYLMEL 497

Query: 508 VYENQ 510
           V +NQ
Sbjct: 501 VVKNQ 497

BLAST of Carg04926 vs. TAIR 10
Match: AT3G42630.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 119.0 bits (297), Expect = 1.1e-26
Identity = 102/361 (28.25%), Postives = 163/361 (45.15%), Query Frame = 0

Query: 143 RINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIALL 202
           +I   +Y  ++  LSQ  L + A   F   KS+ L P+  T  +L+  FA  G    A  
Sbjct: 44  KIQIVDYAPLVQTLSQRRLPDVAHEIFLQTKSVNLLPNYRTLCALMLCFAENGFVLRART 103

Query: 203 FIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFS 262
             DE+       +      LI AY ++  +DE+ +  K +         +  +L I  F 
Sbjct: 104 IWDEIINSCFVPDVFVVSKLISAYEQFGCFDEVAKITKDVAARHSKLLPVVSSLAISCFG 163

Query: 263 KGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKED 322
           K G L+ MEG+   + SK + L++ T   ++  Y+ FG LDKME  Y R+      ++E+
Sbjct: 164 KNGQLELMEGVIEEMDSKGVLLEAETANVIVRYYSFFGSLDKMEKAYGRVKKFGIVIEEE 223

Query: 323 LIRTLALVYIQNHMYSRIETLGIDLHI-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEM 382
            IR + L Y++   + R+     D+ + +    +++W  +LLS+A     + +      M
Sbjct: 224 EIRAVVLAYLKQRKFYRLREFLSDVGLGRRNLGNMLWNSVLLSYAADFKMKSLQREFIGM 283

Query: 383 DKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDG 442
             A    + T  NI  LA+ +M  F  L      +R  ++ PD+VT G ++DA       
Sbjct: 284 LDAGFSPDLTTFNIRALAFSRMALFWDLHLTLEHMRRLNIVPDLVTFGCVVDAYMDKRLA 343

Query: 443 TRILEAWKRMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEEL 502
             +   + RMNL    + + TD L     GKG F    E   A LE   R  K WTY +L
Sbjct: 344 RNLEFVYNRMNLDDSPL-VLTDPLAFEVLGKGDFHLSSE---AVLEFSPR--KNWTYRKL 398

BLAST of Carg04926 vs. TAIR 10
Match: AT1G12700.1 (ATP binding;nucleic acid binding;helicases )

HSP 1 Score: 108.6 bits (270), Expect = 1.5e-23
Identity = 89/365 (24.38%), Postives = 160/365 (43.84%), Query Frame = 0

Query: 141 GSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIA 200
           G   + + +  +I  L  +G + +AV     M   G +P + TYNS+++G    G   +A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212

Query: 201 LLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIRE 260
           L  + +M+E N+  +  TY  +I++  +    D  I   K+ME  G     +TYN L+R 
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272

Query: 261 FSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMK 320
             K G       L + ++S+ +     T   +L+ + K G L +    Y+ ++    +  
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332

Query: 321 EDLIRTLALVYIQNHMYSRIETLGIDLHIK-AGKTDLVWCLLLLSHACLSSR--RGMDSV 380
                TL   Y   +  S    + +DL ++     D+V    L+   C+  R   GM  V
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNM-LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM-KV 392

Query: 381 VQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNK 440
            + + K   + NA   +IL+  + +    K    LF E+ +  V PD++T GILLD    
Sbjct: 393 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 452

Query: 441 SFDGTRILEAWKRMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWT 500
           +    + LE ++ +      + I   + ++    KG  ++D    + SL   G +  V T
Sbjct: 453 NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 512

Query: 501 YEELI 503
           Y  +I
Sbjct: 513 YTVMI 515

BLAST of Carg04926 vs. TAIR 10
Match: AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 1.3e-22
Identity = 65/285 (22.81%), Postives = 132/285 (46.32%), Query Frame = 0

Query: 149 YEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIALLFIDEMK 208
           Y  +I   ++DG++++A+     M   G +P + TY +L+ GF   GK E A+   +EM+
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411

Query: 209 EINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLK 268
                    T++  I+ YG    + EM++   ++ + G  PD +T+N L+  F + G+  
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471

Query: 269 KMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLA 328
           ++ G+++ +       +  T   ++ AY++ G  ++    YRR+L++          T+ 
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531

Query: 329 LVYIQNHMYSRIETLGIDLHI-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEI 388
               +  M+ + E +  ++   +    +L +C LL ++A       M S+ +E+      
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE 591

Query: 389 WNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILL 433
             A +   L+L   K          FSE++ R   PDI T+  ++
Sbjct: 592 PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMV 636

BLAST of Carg04926 vs. TAIR 10
Match: AT5G16640.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 2.0e-20
Identity = 83/350 (23.71%), Postives = 153/350 (43.71%), Query Frame = 0

Query: 165 AVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIALLFIDEMKEINMTREADTYDGLIE 224
           A+S    M  +G  PS+ T+ SL++GF    +   AL   D+M  +        Y+ +I+
Sbjct: 135 ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIID 194

Query: 225 AYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDL 284
              K +  D  ++ L +ME DG  PD +TYN LI      G       +   +  + +  
Sbjct: 195 GLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP 254

Query: 285 QSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLG 344
              T  A+++A  K G + + E FY  ++  + ++  D++ T +L+     MYSR++   
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMI--RRSLDPDIV-TYSLLIYGLCMYSRLDEAE 314

Query: 345 IDLHIKAGK---TDLVWCLLLLSHACLSSR--RGMDSVVQEMDKANEIWNATVANILLLA 404
                   K    D+V   +L++  C S +   GM  +  EM +   + N     IL+  
Sbjct: 315 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM-KLFCEMSQRGVVRNTVTYTILIQG 374

Query: 405 YLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLD--ANNKSFDGTRILEAWKRMNLLSRA 464
           Y +         +F  +    V P+I+T  +LL    +N   +   ++ A  + N +   
Sbjct: 375 YCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD-- 434

Query: 465 VEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELIDLVYE 508
            +I T ++++    K   + D  + Y SL   G    +WTY  ++  +Y+
Sbjct: 435 ADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYK 478

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7025298.16.7e-300100.00Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
KAG6592896.18.5e-29599.03Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
XP_022959989.11.0e-29298.26pentatricopeptide repeat-containing protein At4g14190, chloroplastic [Cucurbita ... [more]
XP_023514113.11.3e-28795.94pentatricopeptide repeat-containing protein At4g14190, chloroplastic [Cucurbita ... [more]
XP_023004999.16.7e-28495.36pentatricopeptide repeat-containing protein At4g14190, chloroplastic [Cucurbita ... [more]
Match NameE-valueIdentityDescription
O232782.6e-12949.28Pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Arabidop... [more]
Q9M2A11.6e-2528.25Pentatricopeptide repeat-containing protein At3g42630 OS=Arabidopsis thaliana OX... [more]
P0C7Q72.1e-2224.38Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS... [more]
Q9LYZ91.8e-2122.81Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... [more]
Q9FMD32.9e-1923.71Pentatricopeptide repeat-containing protein At5g16640, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1H9M95.0e-29398.26pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Cucurbit... [more]
A0A6J1KXW93.3e-28495.36pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Cucurbit... [more]
A0A6J1DBE21.4e-22377.00pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Momordic... [more]
A0A5C7IV154.3e-16759.55Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_001518 PE=4 SV=1[more]
A0A067ECN41.9e-16262.08Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g010459mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G14190.11.8e-13049.28Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G42630.11.1e-2628.25Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G12700.11.5e-2324.38ATP binding;nucleic acid binding;helicases [more]
AT5G02860.11.3e-2222.81Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G16640.12.0e-2023.71Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 350..513
e-value: 9.1E-11
score: 43.7
coord: 81..243
e-value: 3.2E-22
score: 81.3
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 128..274
e-value: 1.9E-8
score: 33.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 183..209
e-value: 1.3E-4
score: 19.9
coord: 218..250
e-value: 2.3E-7
score: 28.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 145..179
score: 9.306201
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 250..284
score: 8.769097
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 180..214
score: 9.941957
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 215..249
score: 10.073492
NoneNo IPR availablePANTHERPTHR47934:SF1REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 62..510
NoneNo IPR availablePANTHERPTHR47934PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIALcoord: 62..510

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg04926-RACarg04926-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding