Carg04876 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg04876
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DNA-binding protein RHL1-like
Location	Carg_Chr13: 8805021 .. 8810853 (-)
RNA-Seq Expression	Carg04876
Synteny	Carg04876

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCGAGGATCATCGTCTTCGAAGAGGGACGAAGCAAAAGGAGAAATGGATCCTGAGATTGCAGCACGAAAGCGGCTTAAGAAGCTTGCATTTAACAATAACATACTTTCAGAAACCCAGGCCAAGCCCCAGGCGTATCTGAGCCCTTCAGCGACGGTTCTGAAGCACCATGGCAAAGACATTGTCAAGAAATCTCAGCGAAAGAACAGGTTCCTGTTCTCGTTTTCGGGCTTGCTTGCTCCCGTTAGTGGAGGAAAGATTGGCGAGCTCAAGGATTTGGGGACCAAGAATCCCATTCTCTATCTTGACTTCCCTCAGGTTCGTCTGTTTCTTCTTTGCTCTAAACACCTTTCTATTTTTCTCTGCTTTGAAAGGTTCCTACAGTTTTCTTCAACTTTTTCTCCTGATTCGCGTTCTTATATGTTCTTGTTGCCTGTGCATTTGGCACTTGTTTGTCATCTCCATCCACCCCCATGTATGATAGACAATCCCATATAGCACTCCATGTTTCTCCCATGTCTCTTCTATACCTACGTTTCATCTTCTGATAGCCTTATTTTGATGTAGAATTTATGTGGTCATTAAGCATGTCGAATTGGAGTTGTTCTCCGTACTAATTCTTTTGCTTTTCAGGGGCGTCTAAAGTTGTTTGGAACTATCGTGTATCCGAAGAACAGATATTTGACTTTGCAGTTTTCTAGAGGCGGAAAGAATGTGATGTGTGAAGATTGTTTTGATAATATGGTTGGTCTTTTTGCTTTTCCTTTTTCCCTCCTTTTTTTTTTTTTTTTTTTGGCATCTTTGTGTCTTTTCTTTCAAAGATAAGGCAAAAATCCTCAGATTCAATACAAGTTGGGCTCGATTAGATCTAATGTATTGGCCTTTCTCTTGGTTTTGTTTTTAGATAGTTTTTTAATATCGATAATGTGAGATCCCCACATCGATTGGAGAGGGTAACGAAACATTCTTTATCAATGTGTGGAAATCTCACCCTAGTAGATACGTTTTAAAAACCTTCGAGGGTTGGTGGGTTGGAGGGAAAGCCCGAAAAGAAAAGCCCAAAGAGAACAATATCTGCTAGCAGTGGGCAAGCTGATATAGATAAAATTGTGGGTTTTCCCTCTTTAAGAAATTAGGATCTTTACCGTTAATAACTTTTCCGAGAATTCACTAATCACAATGTGGAAGTTATTTTCTTAATCTCGTTATTGAAGTCGATACAGATGGCATCACGTTAAACAAATAAAGTCAAACAGTTCCAATGAAGCATGGTGCCTAAAATGCTGATGCTCAAGGTGCAAGGCTTCTGTTAGTATTAGGCCTTTGTCTGAGCAGACAATAAGTCAAGTATTGGCCATAGCTTGCAGACATCTAGCAAGATCTCTTCTTAAATGATATGTTTGCCCGATAAAGTGTGGCAAGGACAATCATCCCCCCACCAAAAGTAAAGGAAAAAGAAGAAGAAAAAGCCAGGTTAAGTTCTCCTGGTGTTTTGGCAAACGATGCCTCAAGTAGATGCCAGATTGTATCATTTTTTGTTCCCTGCCATTATTTACTATCTTCAGATTAAGAACAATTGTTAGGTTCCAATTCACTATGTTGAACGACTCTCTTAGTTTAATCATCATAATGGTGGGAACACCTTTTGACTCAACGGGTTTTTCTCCGACTGCAGATTGTCTTTTCTGATGCATGGTGGATTGGAACAAAAGATGAAAATCCAGAGGAGGACCGTCTTGATTTTCCTAAACAAATGACTATGGTAAGTTTCTTGATAATTTTCAGGTTCTTAAAATGTTTTTTTTTTTTTTTTTTTTGGGTACTTGTTCTTCCCGTCCTGTGAATTTCCCTTTCTTATTACATTTTCTTCTTCATTACACGCTTTACCACTTGTAGTAAGGTAGAATAATTTTATCAATTCCATTTCCGCATCTTTCCTGGAGGGCTTATATGTGAAGCTTCTTGTATGGTTGTTTTGCGAGTCTGCACTGTTTTATTTGGGGCTGGTGCTGCTGTGCCTGCCTTTCTGTTTTACTTTCATTTTCTGAATTGAAGTTCATTTTGAGAGAGACAGAAAGACGGAGAGAATTTGCTAACTCCAAGCTGTTATATGTCAGGGACAATGTGGAGAATATGACTTTAACGGTGGTGCTGGTGTAGCCAGTACGAGTAAGCAGAGTGTTCAAAAGAAGGGAATCAATCGTGCCGAAGAAAATTCCCTTAAAGAAGAACATGGAGATGACTTAGTGGACCTGGAAGACAACATGACAAATTCAATGAAGACTACGCCAGTTAGACATTCTGAAAGATCTGCCGGAAAAGTATTCAAGTATTACCCTTTGCTTATGTTGTTACTACGTAATTGCTATCTAATATCAATAAGGCAGAAAAGCAATTGGCTTATTTGGTATCAAATGGCTTATTTGATCAGCAGTCAGTACTATGAATGGTAGAATATTATGCTGGATGTCCATAATTGGTTTATGATTTTAAACGTTTGTAACTTTAAAACATGTTTTTCATAACGTCCACATTCATGTCATTACTAATATTCCTAACAGCTCCTCTGTTTAAATATTTTTTCCAATTATTTTACTTCTTCGACCATAGCGAATTTGAGTGAGCACCGCTTTAATCCTAGGTGTTTGTCTTGTTGAACTACCTTAAGCCCATTCAGAACTCCAGTTTCTTTCACTTCATCAGCTAGATGGTGTTAGTTGCTATACAGTGCGTTGGTTTGGATTTATAATTCTTATAAGGCTGTACAAATATGAAACAACCAACTTAATCGTTGAGTCTACCTTTTGTAATGTCGTTTAATTTATTTCCTTTTCGTGTTTCAGTTTTGCACAGGCTTTTTCTAAGGAGGAGTCTGCTGGCACTTACGCTGATTTTTCTGAAGGAGAAGAAAAGAATATTGTCATCCATGAACCTTCAATTGGAGATCATGCGAGTGAAAATATCCTGTTTATGATTATTGAGTTTGTTTTAATTCAATCTTGAAATTTATGTCTGCTGCTTTACTGTATGTTCGCTCCCTTAATTGATTGATACAGACAGAAGTTGTCTCTGTCGATTCTGAAGATAAAGATGCTGTGGAAAGACCTCGATTTCTTGAAGGAAATAAAACACCAATTTCTAAGTCTAAAAATGGTTCTCGGGCCAAGGGAAATGCTCAGAGTGGTAATCGTGGTTTACTTGTCCAGCCTACTCTACCTAGTTTGTTCAAGAAAGTGGAGGAAAAGGTAATATCTGAAAACCTTTACTCAACATGTGGAGGAAATAGATTGTTGGTTAGAATCTGTTTACTGCTACATTTAGGAGTTTATTATAACTACTAATTATTTTTTTTTATGCAAAAGGAAATGCTCCAAGTAAAATTCTCATTAATCCTTAATCCTTCCTCCGATGAGTCAGTCTCATTTCCTTTCTATAGTAGGGCAAGCACACAGTGAAATATAAATTAAAACGTACACTCCATCTCTGCCTATAGTCTCGCTCCTCTCCGTATCCTTTACAGTCGAGTTCCTTCGTTCCTCTCCCTATCGGTCGAGAATCTTTTCTTTCCTCTCCACTCTACTTTTCTATGGAAATCTGCCAATTCATTATTTGGTTCCTAAACCTGCTTATTCATGTGGTAGAAGAGACCACCTAACATAGAATTGCTCCAAGTAAAGCCACTTAACCATAGAGTTCTTATGATTGAGTCACCGAAAAGGAAGATGCACATTATTTGTAAAGATAGTGACTTTCAATTCTTTTAAGCTTTTCTTAATTATCTTATCCTCGTGATCACTGTCATTCGGATGTGATTCTGTTTGGTCATATACCCATTTTTTACTTGGGTGTTGCAGTTGCATGCCAAAAAATTCCGTCTCCCATGGCTGCAAATATTGATAATTAAAGATGGAAGCGGAAGAAGGCTTTCTCTCCAGAGACCAGAGCGAAGATATGAGCCTCTAAAATTTTAGAAATTTTCAATATATAACCGTCATAGTTTCCTTGCCTAAATTAATTGTCTCGATGGAAGACAGAATATGATATAGCACTCTTTTTTAGCAGAAAAAGTATCAATAAAATAACTTGATAAAAAAAGTTGACTTTCCAAGATTTTTCTAAAACATGATTATTTCTTTCCATCCCAATGGCCTAGCAAAGTGCTGAAACTGAAAATTCCAAAAGGTTCTCAATCTTTTGCTAGTAACTCCAAAAATGTCTTATCTGAATAATAAATTTTATATCTTTAAGGCACATTTATTTGAAATGAATGCTTACTGTTTTCAGAGGACACCAAGAAGTTCAAAGAGGTCTTCAACACCCAAAGGTTCTAATTTTGTTCATTGATTTTATAATCATGACCATGAGAATACTACAGTAACATCAAATATGAAATTTTTGTTTTCTACAGTTTCTGCCCAAAAGATGCAGCTCTCTGGTTCAAAGCAAAAGATTGACCAGGTGATAAATCTTCATTTTTTAAATTTCAGGAATTAACCGTAATGGATTCTTGTGTAATTTTCAGGATGAAGGATTAAAGAAGAGGAGGGTTGTCCAGGGACAAGATGATGGTTAATCTCTCATGCTCTCTCCATTTACTGCTTGCTATTTCTCTAACAGGCTTATGGTCAGTTGATGTATATTAGCTCTATCAATTTGCAGGAGGAAAATTCCGGAGGAAGGATACAGAATATGAGGTATTAGTGCCATTTTTGCAAATAGTCCATTTAAAACATTTGCTGCTTTATTAGCTTCAGGATTTCTTATATGCACTTTTCCAGCTAGAAGTGGATATGCTTCTCTTATTTATTATCTAACTGGACTAGTCAGCCAGAAGTATCTTCATATTAATCAACTTAGCTGTTGGTGGAAAGGTTTCACAAATATTACTTTTTGGTTCGTAGTTTCAAAATGGTCAGTTTTAGTTTTTTTCTTGGTGAAACTAACAAAAAACCTTTAATTTTATGTTGCTCGCACTTGCCATCCTTCAAACAAATTCAACCAGCCACTCCTTCTCATGTCTAAGGCTCCAGAAAACTTGTCTCATCAGGTTACAATCAAAGTTTTTAAAATTTAATTGACACTGAATTCGCAACTCCGTGTAGTCTATTTCCATTTGCTATTCACGATCGAGTGTGGATGAAATGGTTGACGGATGAGACGTCATTGTATACTAAATCTGGTTTGTCTATATCTTGTAGGACGAAGATGACATCGAGGAGTTATCGAGCTCTCAAGAGGTGAGTGTTCAGTACCTATTATATGAACTACATACTTCTACCATGATTTCTAGAATATTGGATTGGAAGTTTGTTGGGCTGTGCCTTAGGTTTGTACTCATTTTGGAGTCTGATGGAAATATTTGGCTGAACTTAGTACATGTAGTCAATTTCTCACTTCATTCTTTAACTATTAATTATTTGGCTTAGTCCTTACCCTATATTAATTTCTCATTGTCGTGCATCCCATCACGTTTGTTGGAAAGTTGTCATTTCTTGACTGAATAACTATTTATGTCATGTAAGGTTATGAACAAAACAGGTCTCCATATGCCAAAATGTTGTTCTTGATCATGATCACCAAAAAGTGGCAACATTGTCATGAACTTCTCAGATGCATGTGGTTAAATAAATATGTTAGATTAATTTAGCAATTAAACTTGAAAATGGTAGTTGTTATTTAGGGACCAAATGAATTGCTTAACTAAAATATATTCCTTTTAGTTTCTTTTATAAATGTTAGATTAGGATCTTGCACAGTTTTTCTCACAATTTTGCTTGTCATTTAGGACACTGATGAAGATTGGACAAGTTGAGGTTACATTCTAACAATG

mRNA sequence

ATGGCGCGAGGATCATCGTCTTCGAAGAGGGACGAAGCAAAAGGAGAAATGGATCCTGAGATTGCAGCACGAAAGCGGCTTAAGAAGCTTGCATTTAACAATAACATACTTTCAGAAACCCAGGCCAAGCCCCAGGCGTATCTGAGCCCTTCAGCGACGGTTCTGAAGCACCATGGCAAAGACATTGTCAAGAAATCTCAGCGAAAGAACAGGTTCCTGTTCTCGTTTTCGGGCTTGCTTGCTCCCGTTAGTGGAGGAAAGATTGGCGAGCTCAAGGATTTGGGGACCAAGAATCCCATTCTCTATCTTGACTTCCCTCAGGGGCGTCTAAAGTTGTTTGGAACTATCGTGTATCCGAAGAACAGATATTTGACTTTGCAGTTTTCTAGAGGCGGAAAGAATGTGATGTGTGAAGATTGTTTTGATAATATGATTGTCTTTTCTGATGCATGGTGGATTGGAACAAAAGATGAAAATCCAGAGGAGGACCGTCTTGATTTTCCTAAACAAATGACTATGGGACAATGTGGAGAATATGACTTTAACGGTGGTGCTGGTGTAGCCAGTACGAGTAAGCAGAGTGTTCAAAAGAAGGGAATCAATCGTGCCGAAGAAAATTCCCTTAAAGAAGAACATGGAGATGACTTAGTGGACCTGGAAGACAACATGACAAATTCAATGAAGACTACGCCAGTTAGACATTCTGAAAGATCTGCCGGAAAAGTATTCAATTTTGCACAGGCTTTTTCTAAGGAGGAGTCTGCTGGCACTTACGCTGATTTTTCTGAAGGAGAAGAAAAGAATATTGTCATCCATGAACCTTCAATTGGAGATCATGCGAGTGAAAATATCCTGTTTATGATTATTGAGTTTACAGAAGTTGTCTCTGTCGATTCTGAAGATAAAGATGCTGTGGAAAGACCTCGATTTCTTGAAGGAAATAAAACACCAATTTCTAAGTCTAAAAATGGTTCTCGGGCCAAGGGAAATGCTCAGAGTGGTAATCGTGGTTTACTTGTCCAGCCTACTCTACCTAGTTTGTTCAAGAAAGTGGAGGAAAAGAGGACACCAAGAAGTTCAAAGAGGTCTTCAACACCCAAAGTTTCTGCCCAAAAGATGCAGCTCTCTGGTTCAAAGCAAAAGATTGACCAGGATGAAGGATTAAAGAAGAGGAGGGTTGTCCAGGGACAAGATGATGGAGGAAAATTCCGGAGGAAGGATACAGAATATGAGGACGAAGATGACATCGAGGAGTTATCGAGCTCTCAAGAGGACACTGATGAAGATTGGACAAGTTGAGGTTACATTCTAACAATG

Coding sequence (CDS)

ATGGCGCGAGGATCATCGTCTTCGAAGAGGGACGAAGCAAAAGGAGAAATGGATCCTGAGATTGCAGCACGAAAGCGGCTTAAGAAGCTTGCATTTAACAATAACATACTTTCAGAAACCCAGGCCAAGCCCCAGGCGTATCTGAGCCCTTCAGCGACGGTTCTGAAGCACCATGGCAAAGACATTGTCAAGAAATCTCAGCGAAAGAACAGGTTCCTGTTCTCGTTTTCGGGCTTGCTTGCTCCCGTTAGTGGAGGAAAGATTGGCGAGCTCAAGGATTTGGGGACCAAGAATCCCATTCTCTATCTTGACTTCCCTCAGGGGCGTCTAAAGTTGTTTGGAACTATCGTGTATCCGAAGAACAGATATTTGACTTTGCAGTTTTCTAGAGGCGGAAAGAATGTGATGTGTGAAGATTGTTTTGATAATATGATTGTCTTTTCTGATGCATGGTGGATTGGAACAAAAGATGAAAATCCAGAGGAGGACCGTCTTGATTTTCCTAAACAAATGACTATGGGACAATGTGGAGAATATGACTTTAACGGTGGTGCTGGTGTAGCCAGTACGAGTAAGCAGAGTGTTCAAAAGAAGGGAATCAATCGTGCCGAAGAAAATTCCCTTAAAGAAGAACATGGAGATGACTTAGTGGACCTGGAAGACAACATGACAAATTCAATGAAGACTACGCCAGTTAGACATTCTGAAAGATCTGCCGGAAAAGTATTCAATTTTGCACAGGCTTTTTCTAAGGAGGAGTCTGCTGGCACTTACGCTGATTTTTCTGAAGGAGAAGAAAAGAATATTGTCATCCATGAACCTTCAATTGGAGATCATGCGAGTGAAAATATCCTGTTTATGATTATTGAGTTTACAGAAGTTGTCTCTGTCGATTCTGAAGATAAAGATGCTGTGGAAAGACCTCGATTTCTTGAAGGAAATAAAACACCAATTTCTAAGTCTAAAAATGGTTCTCGGGCCAAGGGAAATGCTCAGAGTGGTAATCGTGGTTTACTTGTCCAGCCTACTCTACCTAGTTTGTTCAAGAAAGTGGAGGAAAAGAGGACACCAAGAAGTTCAAAGAGGTCTTCAACACCCAAAGTTTCTGCCCAAAAGATGCAGCTCTCTGGTTCAAAGCAAAAGATTGACCAGGATGAAGGATTAAAGAAGAGGAGGGTTGTCCAGGGACAAGATGATGGAGGAAAATTCCGGAGGAAGGATACAGAATATGAGGACGAAGATGACATCGAGGAGTTATCGAGCTCTCAAGAGGACACTGATGAAGATTGGACAAGTTGA

Protein sequence

MARGSSSSKRDEAKGEMDPEIAARKRLKKLAFNNNILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPKNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKQMTMGQCGEYDFNGGAGVASTSKQSVQKKGINRAEENSLKEEHGDDLVDLEDNMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASENILFMIIEFTEVVSVDSEDKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDTEYEDEDDIEELSSSQEDTDEDWTS

Homology

[Close]

BLAST of Carg04876 vs. NCBI nr
Match: KAG7019884.1 (DNA-binding protein RHL1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 836.6 bits (2160), Expect = 9.4e-239
Identity = 432/432 (100.00%), Postives = 432/432 (100.00%), Query Frame = 0


Query: 1   MARGSSSSKRDEAKGEMDPEIAARKRLKKLAFNNNILSETQAKPQAYLSPSATVLKHHGK 60
           MARGSSSSKRDEAKGEMDPEIAARKRLKKLAFNNNILSETQAKPQAYLSPSATVLKHHGK
Sbjct: 1   MARGSSSSKRDEAKGEMDPEIAARKRLKKLAFNNNILSETQAKPQAYLSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK 120
           DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK 120

Query: 121 NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKQMTMGQCGEYD 180
           NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKQMTMGQCGEYD
Sbjct: 121 NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKQMTMGQCGEYD 180

Query: 181 FNGGAGVASTSKQSVQKKGINRAEENSLKEEHGDDLVDLEDNMTNSMKTTPVRHSERSAG 240
           FNGGAGVASTSKQSVQKKGINRAEENSLKEEHGDDLVDLEDNMTNSMKTTPVRHSERSAG
Sbjct: 181 FNGGAGVASTSKQSVQKKGINRAEENSLKEEHGDDLVDLEDNMTNSMKTTPVRHSERSAG 240

Query: 241 KVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASENILFMIIEFTEVVSVDSE 300
           KVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASENILFMIIEFTEVVSVDSE
Sbjct: 241 KVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASENILFMIIEFTEVVSVDSE 300

Query: 301 DKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSS 360
           DKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSS
Sbjct: 301 DKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSS 360

Query: 361 KRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDTEYEDEDDIEELS 420
           KRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDTEYEDEDDIEELS
Sbjct: 361 KRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDTEYEDEDDIEELS 420

Query: 421 SSQEDTDEDWTS 433
           SSQEDTDEDWTS
Sbjct: 421 SSQEDTDEDWTS 432

[Close]

BLAST of Carg04876 vs. NCBI nr
Match: XP_023519239.1 (DNA-binding protein RHL1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 803.5 bits (2074), Expect = 8.8e-229
Identity = 418/432 (96.76%), Postives = 420/432 (97.22%), Query Frame = 0


Query: 1   MARGSSSSKRDEAKGEMDPEIAARKRLKKLAFNNNILSETQAKPQAYLSPSATVLKHHGK 60
           MARGSSSSKRDEAKG MDPEIAARKRLKKLAF NNILSETQAKPQAYLSPSATVLKHHGK
Sbjct: 1   MARGSSSSKRDEAKGAMDPEIAARKRLKKLAFTNNILSETQAKPQAYLSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK 120
           DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK 120

Query: 121 NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKQMTMGQCGEYD 180
           NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPK+MTMGQCGEYD
Sbjct: 121 NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGQCGEYD 180

Query: 181 FNGGAGVASTSKQSVQKKGINRAEENSLKEEHGDDLVDLEDNMTNSMKTTPVRHSERSAG 240
           FNGGAGVASTSKQSVQKKGINRAEENSLKEEHGDDLVDLEDNMTNSMKTTPVRHSERSAG
Sbjct: 181 FNGGAGVASTSKQSVQKKGINRAEENSLKEEHGDDLVDLEDNMTNSMKTTPVRHSERSAG 240

Query: 241 KVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASENILFMIIEFTEVVSVDSE 300
           KVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASE         TEVVSVDSE
Sbjct: 241 KVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEK--------TEVVSVDSE 300

Query: 301 DKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSS 360
           DKDAVERPRFLEGN+TPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSS
Sbjct: 301 DKDAVERPRFLEGNRTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSS 360

Query: 361 KRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDTEYEDEDDIEELS 420
           KRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGK RRKDTEYEDEDDIEELS
Sbjct: 361 KRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKIRRKDTEYEDEDDIEELS 420

Query: 421 SSQEDTDEDWTS 433
           SSQEDTDEDWTS
Sbjct: 421 SSQEDTDEDWTS 424

[Close]

BLAST of Carg04876 vs. NCBI nr
Match: XP_022924051.1 (DNA-binding protein RHL1-like [Cucurbita moschata])

HSP 1 Score: 798.5 bits (2061), Expect = 2.8e-227
Identity = 416/432 (96.30%), Postives = 419/432 (96.99%), Query Frame = 0


Query: 1   MARGSSSSKRDEAKGEMDPEIAARKRLKKLAFNNNILSETQAKPQAYLSPSATVLKHHGK 60
           MARGSSSSKRDEAKGEM+PEIAARKRLKKLAF NNILSETQAKPQAY SPSATVLKHHGK
Sbjct: 1   MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK 120
           DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK 120

Query: 121 NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKQMTMGQCGEYD 180
           NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPK+MTMG+CGEYD
Sbjct: 121 NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYD 180

Query: 181 FNGGAGVASTSKQSVQKKGINRAEENSLKEEHGDDLVDLEDNMTNSMKTTPVRHSERSAG 240
           FNGGAGVASTSKQSVQKKGINRAEE SLK EHGDDLVDLEDNMTNSMKTTPVRHSERSAG
Sbjct: 181 FNGGAGVASTSKQSVQKKGINRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAG 240

Query: 241 KVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASENILFMIIEFTEVVSVDSE 300
           KVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASE         TEVVSVDSE
Sbjct: 241 KVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEK--------TEVVSVDSE 300

Query: 301 DKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSS 360
           DKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSS
Sbjct: 301 DKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSS 360

Query: 361 KRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDTEYEDEDDIEELS 420
           KRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDTEYEDEDDIEELS
Sbjct: 361 KRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDTEYEDEDDIEELS 420

Query: 421 SSQEDTDEDWTS 433
           SSQEDTDEDWTS
Sbjct: 421 SSQEDTDEDWTS 424

[Close]

BLAST of Carg04876 vs. NCBI nr
Match: XP_023001787.1 (DNA-binding protein RHL1-like [Cucurbita maxima])

HSP 1 Score: 788.9 bits (2036), Expect = 2.3e-224
Identity = 412/432 (95.37%), Postives = 416/432 (96.30%), Query Frame = 0


Query: 1   MARGSSSSKRDEAKGEMDPEIAARKRLKKLAFNNNILSETQAKPQAYLSPSATVLKHHGK 60
           MARGSSSSKRDEAKGEMDPEIAARKRLKKLAF NNILSETQAKPQAYLSPSATVLKHHGK
Sbjct: 1   MARGSSSSKRDEAKGEMDPEIAARKRLKKLAFTNNILSETQAKPQAYLSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK 120
           DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK 120

Query: 121 NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKQMTMGQCGEYD 180
           NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPK+MTMG+CGEYD
Sbjct: 121 NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYD 180

Query: 181 FNGGAGVASTSKQSVQKKGINRAEENSLKEEHGDDLVDLEDNMTNSMKTTPVRHSERSAG 240
           FNGGAGVASTSKQSVQKKGI+RAEENSLKEEHGDDLVDLEDNMTNSMKTTPVRHSERS G
Sbjct: 181 FNGGAGVASTSKQSVQKKGIDRAEENSLKEEHGDDLVDLEDNMTNSMKTTPVRHSERSGG 240

Query: 241 KVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASENILFMIIEFTEVVSVDSE 300
           KVFNFAQAFSKEESAGT ADFSEGEEKNIVI+EPSIGDHASE         TEVVSVDSE
Sbjct: 241 KVFNFAQAFSKEESAGTLADFSEGEEKNIVIYEPSIGDHASEK--------TEVVSVDSE 300

Query: 301 DKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSS 360
           DKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSS
Sbjct: 301 DKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSS 360

Query: 361 KRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDTEYEDEDDIEELS 420
           KRSSTPKVSAQK QLSGSKQKIDQDEGLKKR VVQGQDDGGKF RKDTEYEDEDDIEEL 
Sbjct: 361 KRSSTPKVSAQKKQLSGSKQKIDQDEGLKKRGVVQGQDDGGKFGRKDTEYEDEDDIEELL 420

Query: 421 SSQEDTDEDWTS 433
           SSQEDTDEDWTS
Sbjct: 421 SSQEDTDEDWTS 424

[Close]

BLAST of Carg04876 vs. NCBI nr
Match: XP_038893754.1 (DNA-binding protein RHL1 isoform X1 [Benincasa hispida])

HSP 1 Score: 670.2 bits (1728), Expect = 1.2e-188
Identity = 360/433 (83.14%), Postives = 383/433 (88.45%), Query Frame = 0


Query: 1   MARGSSSSKRDEAKGEMDPEIAARKRLKKLAFNNNILSETQAKPQAYLSPSATVLKHHGK 60
           MARGSSSSKRDEAKGE+DP IAARKRLKKLAF+N+ILSETQAKPQAYLSPSATVLKHHGK
Sbjct: 1   MARGSSSSKRDEAKGEIDPGIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK 120
           DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDL TKNPILYLDFPQGR+KLFGTI+YPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLRTKNPILYLDFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKQMTMGQCGEYD 180
           NRYLTLQFSRGGKNVMCED FDNMIVFSDAWWIGTKDENPEE  LDFP ++T GQCGE D
Sbjct: 121 NRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEAHLDFPIELTTGQCGECD 180

Query: 181 FNGGAGVASTSKQSVQKKGINRAEENSLKEEHGDDLVDLEDNMTNSMKTTPVRHSERSAG 240
           FNGGAGV   SKQSVQKKGIN A ENSLK EHGDDLVDL+DN+TNS+KTTPVRHSERSA 
Sbjct: 181 FNGGAGVTGLSKQSVQKKGINPAVENSLKGEHGDDLVDLKDNVTNSIKTTPVRHSERSAR 240

Query: 241 KVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASENILFMIIEFTEVVSVDSE 300
           KVFNFA+  S++ES  TYAD SEGEEKNIVIHEPSIGDHA E         TE +SVDS 
Sbjct: 241 KVFNFAEVSSEDESTSTYADLSEGEEKNIVIHEPSIGDHAREK--------TEDLSVDSM 300

Query: 301 DKDAVE-RPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRS 360
           D+DA E RP FLEGN+T IS  K  S AKG+AQS  RG LVQPTL SLFKKVEEKRT RS
Sbjct: 301 DEDAGEIRPPFLEGNQTSISTEKKSSLAKGSAQSDTRG-LVQPTLLSLFKKVEEKRTSRS 360

Query: 361 SKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDTEYEDEDDIEEL 420
           SKRSSTPKVS QKMQLSGSK+KIDQDEGL+KRR V+GQDDGGK ++KDTEYE +DDIEEL
Sbjct: 361 SKRSSTPKVSVQKMQLSGSKRKIDQDEGLRKRRAVRGQDDGGKIQKKDTEYEVKDDIEEL 420

Query: 421 SSSQEDTDEDWTS 433
           SSSQEDTDEDWTS
Sbjct: 421 SSSQEDTDEDWTS 424

[Close]

BLAST of Carg04876 vs. ExPASy Swiss-Prot
Match: O81242 (DNA-binding protein RHL1 OS=Arabidopsis thaliana OX=3702 GN=RHL1 PE=1 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 2.5e-77
Identity = 177/379 (46.70%), Postives = 229/379 (60.42%), Query Frame = 0


Query: 1   MARGSSSSKRDEAKGEM-DPEIAARKRLKKLAFNNNILSETQAKPQAYLSPSATVLKHHG 60
           M R SSS K     G+  D E   RKRLK LA +N +LS++ AK  + L PS  VLKHHG
Sbjct: 1   MVRASSSKKGGSKGGDKDDAESKQRKRLKTLALDNQLLSDSPAKSHSSLKPSKQVLKHHG 60

Query: 61  KDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYP 120
            DI++KSQRKNRFLFSF GLLAP+S   IG+L  L TKNP+LYL+FPQGR+KLFGTI+YP
Sbjct: 61  TDIIRKSQRKNRFLFSFPGLLAPISAATIGDLDRLSTKNPVLYLNFPQGRMKLFGTILYP 120

Query: 121 KNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKQMTMGQCGEY 180
           KNRYLTLQFSRGGKNV+C+D FDNMIVFS++WWIGTK+ENPEE RLDFPK++   +  E+
Sbjct: 121 KNRYLTLQFSRGGKNVLCDDYFDNMIVFSESWWIGTKEENPEEARLDFPKELAQAENTEF 180

Query: 181 DFNGGA-GVASTSKQSVQKKGINRAEENSLKEEHGDDLVD----LED--------NMTNS 240
           DF GGA G AS  K +  + G    E +S + ++ D L +    L+D         +T  
Sbjct: 181 DFQGGAGGAASVKKLASPEIGSQPTETDSPEVDNEDVLSEDGEFLDDKIQVTPPVQLTPP 240

Query: 241 MKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASENILF 300
           ++ TPVR S+R++GK FNFA+  S+  S  +  + S+ +EK ++  EP     + E    
Sbjct: 241 VQVTPVRQSQRNSGKKFNFAETSSEASSGESEGNTSDEDEKPLL--EPESSTRSRE---- 300

Query: 301 MIIEFTEVVSVDSEDKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPS 360
                      +S+D +         G     SK      AK          LVQ TL +
Sbjct: 301 -----------ESQDGN---------GITASASKLPEELPAKREKLKSKDSKLVQATLSN 353

Query: 361 LFKKVEEKRTPRSSKRSST 366
           LFKK EEK    S  +SS+
Sbjct: 361 LFKKAEEKTAGTSKAKSSS 353

[Close]

BLAST of Carg04876 vs. ExPASy TrEMBL
Match: A0A6J1E8G5 (DNA-binding protein RHL1-like OS=Cucurbita moschata OX=3662 GN=LOC111431599 PE=4 SV=1)

HSP 1 Score: 798.5 bits (2061), Expect = 1.4e-227
Identity = 416/432 (96.30%), Postives = 419/432 (96.99%), Query Frame = 0


Query: 1   MARGSSSSKRDEAKGEMDPEIAARKRLKKLAFNNNILSETQAKPQAYLSPSATVLKHHGK 60
           MARGSSSSKRDEAKGEM+PEIAARKRLKKLAF NNILSETQAKPQAY SPSATVLKHHGK
Sbjct: 1   MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK 120
           DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK 120

Query: 121 NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKQMTMGQCGEYD 180
           NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPK+MTMG+CGEYD
Sbjct: 121 NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYD 180

Query: 181 FNGGAGVASTSKQSVQKKGINRAEENSLKEEHGDDLVDLEDNMTNSMKTTPVRHSERSAG 240
           FNGGAGVASTSKQSVQKKGINRAEE SLK EHGDDLVDLEDNMTNSMKTTPVRHSERSAG
Sbjct: 181 FNGGAGVASTSKQSVQKKGINRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAG 240

Query: 241 KVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASENILFMIIEFTEVVSVDSE 300
           KVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASE         TEVVSVDSE
Sbjct: 241 KVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEK--------TEVVSVDSE 300

Query: 301 DKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSS 360
           DKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSS
Sbjct: 301 DKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSS 360

Query: 361 KRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDTEYEDEDDIEELS 420
           KRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDTEYEDEDDIEELS
Sbjct: 361 KRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDTEYEDEDDIEELS 420

Query: 421 SSQEDTDEDWTS 433
           SSQEDTDEDWTS
Sbjct: 421 SSQEDTDEDWTS 424

[Close]

BLAST of Carg04876 vs. ExPASy TrEMBL
Match: A0A6J1KHM2 (DNA-binding protein RHL1-like OS=Cucurbita maxima OX=3661 GN=LOC111495823 PE=4 SV=1)

HSP 1 Score: 788.9 bits (2036), Expect = 1.1e-224
Identity = 412/432 (95.37%), Postives = 416/432 (96.30%), Query Frame = 0


Query: 1   MARGSSSSKRDEAKGEMDPEIAARKRLKKLAFNNNILSETQAKPQAYLSPSATVLKHHGK 60
           MARGSSSSKRDEAKGEMDPEIAARKRLKKLAF NNILSETQAKPQAYLSPSATVLKHHGK
Sbjct: 1   MARGSSSSKRDEAKGEMDPEIAARKRLKKLAFTNNILSETQAKPQAYLSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK 120
           DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK 120

Query: 121 NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKQMTMGQCGEYD 180
           NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPK+MTMG+CGEYD
Sbjct: 121 NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYD 180

Query: 181 FNGGAGVASTSKQSVQKKGINRAEENSLKEEHGDDLVDLEDNMTNSMKTTPVRHSERSAG 240
           FNGGAGVASTSKQSVQKKGI+RAEENSLKEEHGDDLVDLEDNMTNSMKTTPVRHSERS G
Sbjct: 181 FNGGAGVASTSKQSVQKKGIDRAEENSLKEEHGDDLVDLEDNMTNSMKTTPVRHSERSGG 240

Query: 241 KVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASENILFMIIEFTEVVSVDSE 300
           KVFNFAQAFSKEESAGT ADFSEGEEKNIVI+EPSIGDHASE         TEVVSVDSE
Sbjct: 241 KVFNFAQAFSKEESAGTLADFSEGEEKNIVIYEPSIGDHASEK--------TEVVSVDSE 300

Query: 301 DKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSS 360
           DKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSS
Sbjct: 301 DKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSS 360

Query: 361 KRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDTEYEDEDDIEELS 420
           KRSSTPKVSAQK QLSGSKQKIDQDEGLKKR VVQGQDDGGKF RKDTEYEDEDDIEEL 
Sbjct: 361 KRSSTPKVSAQKKQLSGSKQKIDQDEGLKKRGVVQGQDDGGKFGRKDTEYEDEDDIEELL 420

Query: 421 SSQEDTDEDWTS 433
           SSQEDTDEDWTS
Sbjct: 421 SSQEDTDEDWTS 424

[Close]

BLAST of Carg04876 vs. ExPASy TrEMBL
Match: A0A1S3CTA5 (DNA-binding protein RHL1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504698 PE=4 SV=1)

HSP 1 Score: 669.5 bits (1726), Expect = 9.6e-189
Identity = 358/433 (82.68%), Postives = 384/433 (88.68%), Query Frame = 0


Query: 1   MARGSSSSKRDEAKGEMDPEIAARKRLKKLAFNNNILSETQAKPQAYLSPSATVLKHHGK 60
           MARGSSSSK+DEAKGE++PEI  RKRLKKLAF+NNILSETQAKPQAYLSPSATVLKHHGK
Sbjct: 1   MARGSSSSKKDEAKGEINPEIGERKRLKKLAFSNNILSETQAKPQAYLSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK 120
           DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDL TKNP+LYLDFPQGR+KLFGTI+YPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKQMTMGQCGEYD 180
           NRYLTLQFS+GGKNV CEDCFDNMIVFSDAWWIGTKDENPEE  LDFPK++T+GQCGEYD
Sbjct: 121 NRYLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYD 180

Query: 181 FNGGAGVASTSKQSVQKKGINRAEENSLKEEHGDDLVDLEDNMTNSMKTTPVRHSERSAG 240
           FNGGAGV STSKQSVQKKGIN A ENS K EHGDDLV LE ++TNS+KT PVRHSERSA 
Sbjct: 181 FNGGAGVTSTSKQSVQKKGINPATENSFKGEHGDDLVGLEASVTNSVKTMPVRHSERSAR 240

Query: 241 KVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASENILFMIIEFTEVVSVDSE 300
           KVFNFA+A S++ES GT  D SEGEEKNIVIHEPSIGDHASE         TE +SV+S 
Sbjct: 241 KVFNFAEASSEDESTGTDTDLSEGEEKNIVIHEPSIGDHASEK--------TEDISVESI 300

Query: 301 DKDAVE-RPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRS 360
           D+DAVE +P FLEGN+T ISK K  SRAKG+AQS  RG LVQPTL SLFKKVEEKRTPRS
Sbjct: 301 DEDAVEIKPSFLEGNQTSISKEKKNSRAKGSAQSDTRG-LVQPTLLSLFKKVEEKRTPRS 360

Query: 361 SKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDTEYEDEDDIEEL 420
           SKRSS PKVS QKMQLSGSKQKIDQDEG KKRR V+GQ  GGK +RKDTEYE ED+IEEL
Sbjct: 361 SKRSSVPKVSTQKMQLSGSKQKIDQDEGSKKRRAVRGQ--GGKAQRKDTEYEVEDEIEEL 420

Query: 421 SSSQEDTDEDWTS 433
           SSSQEDTDEDWTS
Sbjct: 421 SSSQEDTDEDWTS 422

[Close]

BLAST of Carg04876 vs. ExPASy TrEMBL
Match: A0A6J1C822 (DNA-binding protein RHL1 OS=Momordica charantia OX=3673 GN=LOC111008835 PE=4 SV=1)

HSP 1 Score: 662.9 bits (1709), Expect = 9.0e-187
Identity = 348/433 (80.37%), Postives = 377/433 (87.07%), Query Frame = 0


Query: 1   MARGSSSSKRDEAKGEMDPEIAARKRLKKLAFNNNILSETQAKPQAYLSPSATVLKHHGK 60
           MARGSSSSKR+   GE+DPE A RKRLKKLAF+NN+LS+TQAKPQAYLSPSATVLKHHGK
Sbjct: 1   MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK 120
           DIVKKSQRKNRFLFSFSGLL PVSGGKIGELKDLGTKNPILYLDFPQGR+KLFGTI+YPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPILYLDFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKQMTMGQCGEYD 180
           NRYLTLQFSRGGKNV CED FD+M+VFSDAWWIGTKDENPEE RLD PK++T G+CGEYD
Sbjct: 121 NRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYD 180

Query: 181 FNGGAGVASTSKQSVQKKGINRAEENSLKEEHGDDLVDLEDNMTNSMKTTPVRHSERSAG 240
           FNGGAGV STSK SVQKKGIN AEE+S K E GD L DLEDNM NS+ TTPVRHSERSAG
Sbjct: 181 FNGGAGVTSTSKHSVQKKGINHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAG 240

Query: 241 KVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASENILFMIIEFTEVVSVDSE 300
           KVF FA+A S++ES G+Y D SEGEEKNIVIHEPSIGDHASE         TE +SVD++
Sbjct: 241 KVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHASEK--------TEDLSVDAK 300

Query: 301 DKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSS 360
           D+D + RP FLEGN+  ISK K  SRAKGN +S NRGL VQ TLPSLFKKVEEKRTPRSS
Sbjct: 301 DEDTMGRPPFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEKRTPRSS 360

Query: 361 KRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDTEYEDEDDIEELS 420
           KRSS PKVSA+KMQLSGSK+KI+QDEG KKRR V+GQDDGGK  RKD EYE EDDIEELS
Sbjct: 361 KRSSAPKVSAEKMQLSGSKRKIEQDEGSKKRRAVRGQDDGGKVPRKDAEYEVEDDIEELS 420

Query: 421 SSQ-EDTDEDWTS 433
           SSQ EDTDEDWTS
Sbjct: 421 SSQEEDTDEDWTS 425

[Close]

BLAST of Carg04876 vs. ExPASy TrEMBL
Match: A0A6J1GT04 (DNA-binding protein RHL1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457259 PE=4 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 2.2e-185
Identity = 350/433 (80.83%), Postives = 380/433 (87.76%), Query Frame = 0


Query: 1   MARGSSSSKRDEAKGEMDPEIAARKRLKKLAFNNNILSETQAKPQAYLSPSATVLKHHGK 60
           MARGSSSSK ++A  E++PEIAARKRLKKLAF+NN+LS TQAKPQ  L PSATVLKH+GK
Sbjct: 1   MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK 120
           DIVKKS RKNRFLFSFSGLLAPVSGGKIGELKDLG+KNPILYL+FPQGR+KLFGTI+YPK
Sbjct: 61  DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKQMTMGQCGEYD 180
           NRYLTLQFSRGGKNV CED FDNMIVFSDAWWIGTKDEN EE RLDFPK+++M QCGEYD
Sbjct: 121 NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYD 180

Query: 181 FNGGAGVASTSKQSVQKKGINRAEENSLKEEHGDDLVDLEDNMTNSMKTTPVRHSERSAG 240
           FNGGAGV +T K S QKKGINR EENSLK EHGDDLVDLEDNMT  +KTTPVRHSERSAG
Sbjct: 181 FNGGAGVVTTIKPSAQKKGINRVEENSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG 240

Query: 241 KVFNFAQAFSKE-ESAGTYADFSEGEEKNIVIHEPSIGDHASENILFMIIEFTEVVSVDS 300
           KVFNFA+A S E ESAGT  D SEGEEKN+VIHEPSIGDHASEN        TE +SVDS
Sbjct: 241 KVFNFAEASSSEDESAGTCDDLSEGEEKNVVIHEPSIGDHASEN--------TEDISVDS 300

Query: 301 EDKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRS 360
           +D DAVE+   L+G++  ISK+K  SRAKGNAQS NRG+LVQPTL SLFKKVEEKRTPR 
Sbjct: 301 KDVDAVEKSPILQGDQESISKTKRSSRAKGNAQSSNRGILVQPTLHSLFKKVEEKRTPRR 360

Query: 361 SKRSSTPKVSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDTEYEDEDDIEEL 420
           SKRSST KVSAQK+QLSGSK+KIDQDEG +KRRVV+ QDDGGK  RKDTEYE EDDIEEL
Sbjct: 361 SKRSSTSKVSAQKVQLSGSKRKIDQDEGSRKRRVVRVQDDGGKVTRKDTEYEVEDDIEEL 420

Query: 421 SSSQEDTDEDWTS 433
           SSSQEDTDEDWTS
Sbjct: 421 SSSQEDTDEDWTS 425

[Close]

BLAST of Carg04876 vs. TAIR 10
Match: AT1G48380.1 (root hair initiation protein root hairless 1 (RHL1) )

HSP 1 Score: 290.8 bits (743), Expect = 1.8e-78
Identity = 177/379 (46.70%), Postives = 229/379 (60.42%), Query Frame = 0


Query: 1   MARGSSSSKRDEAKGEM-DPEIAARKRLKKLAFNNNILSETQAKPQAYLSPSATVLKHHG 60
           M R SSS K     G+  D E   RKRLK LA +N +LS++ AK  + L PS  VLKHHG
Sbjct: 1   MVRASSSKKGGSKGGDKDDAESKQRKRLKTLALDNQLLSDSPAKSHSSLKPSKQVLKHHG 60

Query: 61  KDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYP 120
            DI++KSQRKNRFLFSF GLLAP+S   IG+L  L TKNP+LYL+FPQGR+KLFGTI+YP
Sbjct: 61  TDIIRKSQRKNRFLFSFPGLLAPISAATIGDLDRLSTKNPVLYLNFPQGRMKLFGTILYP 120

Query: 121 KNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKQMTMGQCGEY 180
           KNRYLTLQFSRGGKNV+C+D FDNMIVFS++WWIGTK+ENPEE RLDFPK++   +  E+
Sbjct: 121 KNRYLTLQFSRGGKNVLCDDYFDNMIVFSESWWIGTKEENPEEARLDFPKELAQAENTEF 180

Query: 181 DFNGGA-GVASTSKQSVQKKGINRAEENSLKEEHGDDLVD----LED--------NMTNS 240
           DF GGA G AS  K +  + G    E +S + ++ D L +    L+D         +T  
Sbjct: 181 DFQGGAGGAASVKKLASPEIGSQPTETDSPEVDNEDVLSEDGEFLDDKIQVTPPVQLTPP 240

Query: 241 MKTTPVRHSERSAGKVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASENILF 300
           ++ TPVR S+R++GK FNFA+  S+  S  +  + S+ +EK ++  EP     + E    
Sbjct: 241 VQVTPVRQSQRNSGKKFNFAETSSEASSGESEGNTSDEDEKPLL--EPESSTRSRE---- 300

Query: 301 MIIEFTEVVSVDSEDKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPS 360
                      +S+D +         G     SK      AK          LVQ TL +
Sbjct: 301 -----------ESQDGN---------GITASASKLPEELPAKREKLKSKDSKLVQATLSN 353

Query: 361 LFKKVEEKRTPRSSKRSST 366
           LFKK EEK    S  +SS+
Sbjct: 361 LFKKAEEKTAGTSKAKSSS 353

[Close]

BLAST of Carg04876 vs. TAIR 10
Match: AT1G48380.2 (root hair initiation protein root hairless 1 (RHL1) )

HSP 1 Score: 274.6 bits (701), Expect = 1.3e-73
Identity = 177/410 (43.17%), Postives = 229/410 (55.85%), Query Frame = 0


Query: 1   MARGSSSSKRDEAKGEM-DPEIAARKRLKKLAFNNNILSETQAKPQAYLSPSATVLKHHG 60
           M R SSS K     G+  D E   RKRLK LA +N +LS++ AK  + L PS  VLKHHG
Sbjct: 1   MVRASSSKKGGSKGGDKDDAESKQRKRLKTLALDNQLLSDSPAKSHSSLKPSKQVLKHHG 60

Query: 61  KDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYP 120
            DI++KSQRKNRFLFSF GLLAP+S   IG+L  L TKNP+LYL+FPQGR+KLFGTI+YP
Sbjct: 61  TDIIRKSQRKNRFLFSFPGLLAPISAATIGDLDRLSTKNPVLYLNFPQGRMKLFGTILYP 120

Query: 121 KNRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKQMT------- 180
           KNRYLTLQFSRGGKNV+C+D FDNMIVFS++WWIGTK+ENPEE RLDFPK++        
Sbjct: 121 KNRYLTLQFSRGGKNVLCDDYFDNMIVFSESWWIGTKEENPEEARLDFPKELAQVDTFHL 180

Query: 181 ------------------------MGQCGEYDFNGGA-GVASTSKQSVQKKGINRAEENS 240
                                     +  E+DF GGA G AS  K +  + G    E +S
Sbjct: 181 FLHFLFKTMVATEMFNMIRRILWFQAENTEFDFQGGAGGAASVKKLASPEIGSQPTETDS 240

Query: 241 LKEEHGDDLVD----LED--------NMTNSMKTTPVRHSERSAGKVFNFAQAFSKEESA 300
            + ++ D L +    L+D         +T  ++ TPVR S+R++GK FNFA+  S+  S 
Sbjct: 241 PEVDNEDVLSEDGEFLDDKIQVTPPVQLTPPVQVTPVRQSQRNSGKKFNFAETSSEASSG 300

Query: 301 GTYADFSEGEEKNIVIHEPSIGDHASENILFMIIEFTEVVSVDSEDKDAVERPRFLEGNK 360
            +  + S+ +EK ++  EP     + E               +S+D +         G  
Sbjct: 301 ESEGNTSDEDEKPLL--EPESSTRSRE---------------ESQDGN---------GIT 360

Query: 361 TPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSST 366
              SK      AK          LVQ TL +LFKK EEK    S  +SS+
Sbjct: 361 ASASKLPEELPAKREKLKSKDSKLVQATLSNLFKKAEEKTAGTSKAKSSS 384

The following BLAST results are available for this feature:

BLAST of Carg04876 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7019884.1	9.4e-239	100.00	DNA-binding protein RHL1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023519239.1	8.8e-229	96.76	DNA-binding protein RHL1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022924051.1	2.8e-227	96.30	DNA-binding protein RHL1-like [Cucurbita moschata]	[more]
XP_023001787.1	2.3e-224	95.37	DNA-binding protein RHL1-like [Cucurbita maxima]	[more]
XP_038893754.1	1.2e-188	83.14	DNA-binding protein RHL1 isoform X1 [Benincasa hispida]	[more]

BLAST of Carg04876 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81242	2.5e-77	46.70	DNA-binding protein RHL1 OS=Arabidopsis thaliana OX=3702 GN=RHL1 PE=1 SV=1	[more]

BLAST of Carg04876 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E8G5	1.4e-227	96.30	DNA-binding protein RHL1-like OS=Cucurbita moschata OX=3662 GN=LOC111431599 PE=4...	[more]
A0A6J1KHM2	1.1e-224	95.37	DNA-binding protein RHL1-like OS=Cucurbita maxima OX=3661 GN=LOC111495823 PE=4 S...	[more]
A0A1S3CTA5	9.6e-189	82.68	DNA-binding protein RHL1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504698 PE=4...	[more]
A0A6J1C822	9.0e-187	80.37	DNA-binding protein RHL1 OS=Momordica charantia OX=3673 GN=LOC111008835 PE=4 SV=...	[more]
A0A6J1GT04	2.2e-185	80.83	DNA-binding protein RHL1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Carg04876 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48380.1	1.8e-78	46.70	root hair initiation protein root hairless 1 (RHL1)	[more]
AT1G48380.2	1.3e-73	43.17	root hair initiation protein root hairless 1 (RHL1)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 362..381
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 411..432
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 302..432
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 316..340
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 382..410
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
IPR038859	DNA-binding protein RHL1	PANTHER	PTHR35698	DNA-BINDING PROTEIN RHL1	coord: 1..431

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04876-RA	Carg04876-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042023	DNA endoreduplication
molecular_function	GO:0003677	DNA binding