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Carg04816 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCGGCTGAACGTTTTCATTCACTGAGTAGCCGATCGCAGCCTTCTAGCGCCGTTGAGTATGGTTCTCTAACTGCAACATTTCGCCATTTTCCCCTCTCTTTGCTAGTAGTCTTCTCTTTGCTAGTTGTCTTCAATGCTCTGTTTTCGTTTCATTCTTTAGGAATTTTTTGACTTTTGCACACTTCATTTTCCGAATCCTCCGAGGTTCGTGATTGCTTAGTGTAGTTGCCCTGTGGATGACGGAGATGGTTAATATATTACCGGTTAACTTCAGCATTGTTATTCATTTTTGTTTTTCTGATTGGATTCGTTAATTTAAGACTGTAAGTGGTTGGAGGCTTAGATTAAGAAATTCTTCATATTTTTGTGTTTCGAATTTAAAGCCTAGAAAATGATAGGTGTCTTCGACTTCCGTAGTCAAATCCTTTAATTTGAATTTCCATTTTCACAATATTCAGTTGCCTCTTAAAATGAATGTTTGGCGCTCTCTGAGGGTTTTCCCCTTGTCTTGTCGTCTTGTTCAGCTAGATTTGTTAAGATGTTTACGGCCCTGAAAAAGATCCACAAGGATAAGGATGTCGAACCTTCCGAGTTCGAAGAGACTGTTGCGCAGGTTTGCTTCATAGAGAACAGAAATCTCTTTGTTTTTTTTACTCAATTGTTAACGTTCCTTTACATTCCTCTTTATTGGCACTTCCGATGTCTCTGCAGGCGCTCTTTGATTTGGAAAACACCAATTCGGAGCTGAAAAGTGACCTTAAGGATCTTTACATTAATTCCGCTCTGTAAGTGACTTAGAGTTATTTCTAAAACATGTTAATCATGATATAATCATTCTGTTTTTCATTATACTAATATTTACGTCTTTGTGGTTGCAGTCAAGTTGATGTTGCTGGAAACAAGAAGGCCGTTGTTATCTATGTTCCCTTTAGATTGAGGAAGGCATTCCGCAAGATTCAGTTGAGGCTTGTCCGTGAGCTTGAGAAGAAGTTCAGTGGAAAGGTACTAGAAGGTCCATTTTTGCATTAGTTCTCTTTTCACTTCGCAAAAGCATAATCATTTTTAAAGTTTTTATCATTAGTTAACTTGGGACATGAATGTGGTGACATACTTCCTACATTGACTTCAAGTGATGGTACGGTGTGAGGAGGTTCATGTCCTACACATTGTTCAATTCATGATATAATACAAATATTGTATCAGTCAGTTTAGACATCAATAATTAGAAAGATGTTCCACCTTTTTTCCCCCTATGTTCTCTACTTTAAGGATTGATCGACGTGTATACAAATGTATGTCATGTGTAAGCCTTATGTTTTCTTGTGCTAATTTTCTTTGTGACCCCTTGTTAGGATGTGATTCTGGTTGCTAACCGAAGAATCCTGAGACCTCCAAAGAAAGGGTCAGCAGCTCAAAGGCCTCGCACACGAACTCTTACTTCTGTGCATGAAGCAATGCTAGAAGATATCGTTTTGCCTGCAGAAATTGTTGGGAAACGAACCAGATACAGGGTTGATGGATCAAAAATCATGAAGGTAAATGCATGGCTTAGAATACCTTTTCCTCATTTCATCTGTCCAGTTAGTATGGAATTTAGATTGTGAATGTCATCTATATTTGGTAAGTTGTATGCTTTTTCATTGATTTTCTTAAGTAATTGTCGCAACTTCTATGCACCACAACTGAATTCTCATCGATCATTTTATTTACTCTATTGCTCCAGAATATACGATCCTATTTTTTGCATCTACTGTTTAGAGGGTATAATGGATTCACTTGGCTTGTGAGACTAGGACTGATGCTAATGAATAAAAATCCAAAATTATATTTGTTTGGAATTTCATAGAAGGCCAACCTTCCATTCTCAACTAAACCATTACTTATCCTGGTTTTGGTTTCTTCGCCACCAAATGTTCTTGCGATGCTTGGGATCTCAGAATGTATAATTAGATAGGGGCTAGTTTGTGGTGGTGTGCATTTTATTTACACTCTTACACGCTCGGTCTATATATCATAGCACCTATTACGGGTATTTACTCTTTGGTTCTTCTGGGTGCAGGTTTTCTTGGACCCGAAAGAGCAGAACAACACCGAGTACAAGTTGGAGAGTTTCGCTGCAGTTTACAGGAAGCTTTCTGGCAAAGACGTTGCCTTTGAGTTCCCGATTACTGAGGCATAACATCCTTATGCAATGTGATTCCGTTTAGATGCTTTTAGTTGAAAGTCATTCAAATTTTTGATGTTGAGAACGTTGAGTGATGTCTTAGATTCTGTTTTTTTTATAAGATTTTTGATTTGACGAAATGAATTGATTAATAGATTCTGTTATTTAAGTATTGATTGTTGGGAACGAAAAAAAAAATCTCAGGCCGGGAAAAAACTTATGTGAACTTCATTAGTTCTGTTAGTTTCTCATGTTTATTTATTATTTTTTAAAATTTTAATTGCACTATGAAATATGATGAAAAATGGAATGAGCTTTTGTTGATGATTTTAGATTAAAACTTAATTCATAATTTTATGAGGCAAATTAGAAAGGATTAGGACAATTTTAATCTATACTTTAGGTGTAAAATTTTGTTAGGAAAACATGAAAATTGTTTGAGAATGTGTAACTTATTTATTCTAGTTTCTGAGTGTTATTTTTATTATTAAATAAATTTATGTAATTCAACCCCTAATAGATTTTTT TCGGCTGAACGTTTTCATTCACTGAGTAGCCGATCGCAGCCTTCTAGCGCCGTTGAGTATGGTTCTCTAACTGCAACATTTCGCCATTTTCCCCTCTCTTTGCTAGTAGTCTTCTCTTTGCTAGTTGTCTTCAATGCTCTGTTTTCGTTTCATTCTTTAGGAATTTTTTGACTTTTGCACACTTCATTTTCCGAATCCTCCGAGGTTCGTGATTGCTTAGTGTAGTTGCCCTGTGGATGACGGAGATGGTTAATATATTACCGGTTAACTTCAGCATTGTTATTCATTTTTGTTTTTCTGATTGGATTCGTTAATTTAAGACTGTAAGTGGTTGGAGGCTTAGATTAAGAAATTCTTCATATTTTTGTGTTTCGAATTTAAAGCCTAGAAAATGATAGGTGTCTTCGACTTCCGTAGTCAAATCCTTTAATTTGAATTTCCATTTTCACAATATTCAGTTGCCTCTTAAAATGAATGTTTGGCGCTCTCTGAGGGTTTTCCCCTTGTCTTGTCGTCTTGTTCAGCTAGATTTGTTAAGATGTTTACGGCCCTGAAAAAGATCCACAAGGATAAGGATGTCGAACCTTCCGAGTTCGAAGAGACTGTTGCGCAGGCGCTCTTTGATTTGGAAAACACCAATTCGGAGCTGAAAAGTGACCTTAAGGATCTTTACATTAATTCCGCTCTTCAAGTTGATGTTGCTGGAAACAAGAAGGCCGTTGTTATCTATGTTCCCTTTAGATTGAGGAAGGCATTCCGCAAGATTCAGTTGAGGCTTGTCCGTGAGCTTGAGAAGAAGTTCAGTGGAAAGGATGTGATTCTGGTTGCTAACCGAAGAATCCTGAGACCTCCAAAGAAAGGGTCAGCAGCTCAAAGGCCTCGCACACGAACTCTTACTTCTGTGCATGAAGCAATGCTAGAAGATATCGTTTTGCCTGCAGAAATTGTTGGGAAACGAACCAGATACAGGGTTGATGGATCAAAAATCATGAAGGTTTTCTTGGACCCGAAAGAGCAGAACAACACCGAGTACAAGTTGGAGAGTTTCGCTGCAGTTTACAGGAAGCTTTCTGGCAAAGACGTTGCCTTTGAGTTCCCGATTACTGAGGCATAACATCCTTATGCAATGTGATTCCGTTTAGATGCTTTTAGTTGAAAGTCATTCAAATTTTTGATGTTGAGAACGTTGAGTGATGTCTTAGATTCTGTTTTTTTTATAAGATTTTTGATTTGACGAAATGAATTGATTAATAGATTCTGTTATTTAAGTATTGATTGTTGGGAACGAAAAAAAAAATCTCAGGCCGGGAAAAAACTTATGTGAACTTCATTAGTTCTGTTAGTTTCTCATGTTTATTTATTATTTTTTAAAATTTTAATTGCACTATGAAATATGATGAAAAATGGAATGAGCTTTTGTTGATGATTTTAGATTAAAACTTAATTCATAATTTTATGAGGCAAATTAGAAAGGATTAGGACAATTTTAATCTATACTTTAGGTGTAAAATTTTGTTAGGAAAACATGAAAATTGTTTGAGAATGTGTAACTTATTTATTCTAGTTTCTGAGTGTTATTTTTATTATTAAATAAATTTATGTAATTCAACCCCTAATAGATTTTTT ATGTTTACGGCCCTGAAAAAGATCCACAAGGATAAGGATGTCGAACCTTCCGAGTTCGAAGAGACTGTTGCGCAGGCGCTCTTTGATTTGGAAAACACCAATTCGGAGCTGAAAAGTGACCTTAAGGATCTTTACATTAATTCCGCTCTTCAAGTTGATGTTGCTGGAAACAAGAAGGCCGTTGTTATCTATGTTCCCTTTAGATTGAGGAAGGCATTCCGCAAGATTCAGTTGAGGCTTGTCCGTGAGCTTGAGAAGAAGTTCAGTGGAAAGGATGTGATTCTGGTTGCTAACCGAAGAATCCTGAGACCTCCAAAGAAAGGGTCAGCAGCTCAAAGGCCTCGCACACGAACTCTTACTTCTGTGCATGAAGCAATGCTAGAAGATATCGTTTTGCCTGCAGAAATTGTTGGGAAACGAACCAGATACAGGGTTGATGGATCAAAAATCATGAAGGTTTTCTTGGACCCGAAAGAGCAGAACAACACCGAGTACAAGTTGGAGAGTTTCGCTGCAGTTTACAGGAAGCTTTCTGGCAAAGACGTTGCCTTTGAGTTCCCGATTACTGAGGCATAA MFTALKKIHKDKDVEPSEFEETVAQALFDLENTNSELKSDLKDLYINSALQVDVAGNKKAVVIYVPFRLRKAFRKIQLRLVRELEKKFSGKDVILVANRRILRPPKKGSAAQRPRTRTLTSVHEAMLEDIVLPAEIVGKRTRYRVDGSKIMKVFLDPKEQNNTEYKLESFAAVYRKLSGKDVAFEFPITEA Homology
BLAST of Carg04816 vs. NCBI nr
Match: XP_022924227.1 (40S ribosomal protein S7-like [Cucurbita moschata] >XP_022924228.1 40S ribosomal protein S7-like [Cucurbita moschata] >XP_023001195.1 40S ribosomal protein S7-like [Cucurbita maxima] >XP_023519010.1 40S ribosomal protein S7-like [Cucurbita pepo subsp. pepo] >XP_023519011.1 40S ribosomal protein S7-like [Cucurbita pepo subsp. pepo] >KAG7019942.1 40S ribosomal protein S7 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 365.9 bits (938), Expect = 2.1e-97 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of Carg04816 vs. NCBI nr
Match: KAG6584357.1 (40S ribosomal protein S7, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 365.9 bits (938), Expect = 2.1e-97 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of Carg04816 vs. NCBI nr
Match: XP_022955302.1 (40S ribosomal protein S7-like [Cucurbita moschata] >XP_022955303.1 40S ribosomal protein S7-like [Cucurbita moschata] >XP_022994526.1 40S ribosomal protein S7-like [Cucurbita maxima] >XP_022994527.1 40S ribosomal protein S7-like [Cucurbita maxima] >XP_023541066.1 40S ribosomal protein S7-like [Cucurbita pepo subsp. pepo] >XP_023541067.1 40S ribosomal protein S7-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 358.6 bits (919), Expect = 3.3e-95 Identity = 185/191 (96.86%), Postives = 190/191 (99.48%), Query Frame = 0
BLAST of Carg04816 vs. NCBI nr
Match: KAG6572941.1 (40S ribosomal protein S7, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 358.6 bits (919), Expect = 3.3e-95 Identity = 185/191 (96.86%), Postives = 190/191 (99.48%), Query Frame = 0
BLAST of Carg04816 vs. NCBI nr
Match: KAG7012124.1 (40S ribosomal protein S7 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 356.7 bits (914), Expect = 1.3e-94 Identity = 184/191 (96.34%), Postives = 190/191 (99.48%), Query Frame = 0
BLAST of Carg04816 vs. ExPASy Swiss-Prot
Match: Q9ZNS1 (40S ribosomal protein S7 OS=Avicennia marina OX=82927 GN=RPS7 PE=2 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 6.1e-84 Identity = 155/190 (81.58%), Postives = 175/190 (92.11%), Query Frame = 0
BLAST of Carg04816 vs. ExPASy Swiss-Prot
Match: Q9C514 (40S ribosomal protein S7-1 OS=Arabidopsis thaliana OX=3702 GN=RPS7A PE=2 SV=1) HSP 1 Score: 303.5 bits (776), Expect = 1.7e-81 Identity = 149/191 (78.01%), Postives = 177/191 (92.67%), Query Frame = 0
BLAST of Carg04816 vs. ExPASy Swiss-Prot
Match: Q9XH45 (40S ribosomal protein S7 OS=Brassica oleracea OX=3712 GN=RPS7 PE=2 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 2.8e-81 Identity = 150/190 (78.95%), Postives = 167/190 (87.89%), Query Frame = 0
BLAST of Carg04816 vs. ExPASy Swiss-Prot
Match: Q9M885 (40S ribosomal protein S7-2 OS=Arabidopsis thaliana OX=3702 GN=RPS7B PE=2 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 4.1e-80 Identity = 149/191 (78.01%), Postives = 168/191 (87.96%), Query Frame = 0
BLAST of Carg04816 vs. ExPASy Swiss-Prot
Match: Q9XET4 (40S ribosomal protein S7 OS=Secale cereale OX=4550 GN=RPS7 PE=2 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 7.7e-79 Identity = 143/190 (75.26%), Postives = 170/190 (89.47%), Query Frame = 0
BLAST of Carg04816 vs. ExPASy TrEMBL
Match: A0A6J1E8B6 (40S ribosomal protein S7 OS=Cucurbita moschata OX=3662 GN=LOC111431738 PE=3 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 1.0e-97 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of Carg04816 vs. ExPASy TrEMBL
Match: A0A6J1KKI9 (40S ribosomal protein S7 OS=Cucurbita maxima OX=3661 GN=LOC111495404 PE=3 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 1.0e-97 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of Carg04816 vs. ExPASy TrEMBL
Match: A0A6J1JZE1 (40S ribosomal protein S7 OS=Cucurbita maxima OX=3661 GN=LOC111490221 PE=3 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 1.6e-95 Identity = 185/191 (96.86%), Postives = 190/191 (99.48%), Query Frame = 0
BLAST of Carg04816 vs. ExPASy TrEMBL
Match: A0A6J1GT63 (40S ribosomal protein S7 OS=Cucurbita moschata OX=3662 GN=LOC111457306 PE=3 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 1.6e-95 Identity = 185/191 (96.86%), Postives = 190/191 (99.48%), Query Frame = 0
BLAST of Carg04816 vs. ExPASy TrEMBL
Match: A0A0A0LSZ7 (40S ribosomal protein S7 OS=Cucumis sativus OX=3659 GN=Csa_1G042360 PE=3 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 8.0e-95 Identity = 185/191 (96.86%), Postives = 189/191 (98.95%), Query Frame = 0
BLAST of Carg04816 vs. TAIR 10
Match: AT1G48830.1 (Ribosomal protein S7e family protein ) HSP 1 Score: 303.5 bits (776), Expect = 1.2e-82 Identity = 149/191 (78.01%), Postives = 177/191 (92.67%), Query Frame = 0
BLAST of Carg04816 vs. TAIR 10
Match: AT1G48830.2 (Ribosomal protein S7e family protein ) HSP 1 Score: 303.5 bits (776), Expect = 1.2e-82 Identity = 149/191 (78.01%), Postives = 177/191 (92.67%), Query Frame = 0
BLAST of Carg04816 vs. TAIR 10
Match: AT3G02560.1 (Ribosomal protein S7e family protein ) HSP 1 Score: 298.9 bits (764), Expect = 2.9e-81 Identity = 149/191 (78.01%), Postives = 168/191 (87.96%), Query Frame = 0
BLAST of Carg04816 vs. TAIR 10
Match: AT3G02560.2 (Ribosomal protein S7e family protein ) HSP 1 Score: 298.9 bits (764), Expect = 2.9e-81 Identity = 149/191 (78.01%), Postives = 168/191 (87.96%), Query Frame = 0
BLAST of Carg04816 vs. TAIR 10
Match: AT5G16130.1 (Ribosomal protein S7e family protein ) HSP 1 Score: 294.3 bits (752), Expect = 7.2e-80 Identity = 147/188 (78.19%), Postives = 165/188 (87.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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