Carg04667 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg04667
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationCarg_Chr11: 12949887 .. 12951446 (+)
RNA-Seq ExpressionCarg04667
SyntenyCarg04667
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGACCTGCAACAGATTCACGCCCACCTCATCAAATCCGGCAGGGCCAAAGACTCTTTTGCTGCCAGTCGTGTTTTGGCCTTCTGCGCCTCCCCGTTGGGCAATATGGACTACGCATATCTGGTTTTTAAGCAAATGCAAAACCCTAATGTTTTTTGTTGGAATACAATAATAAGAGGCTTCTCGCGAAGCTCAAACCCTCAAATGGCTCTTTATCTTTTCATCCACATGTTGGTTTCTTCGCAAATAGAACCGCAAAGATTGACTTACCCATCAGTCTTCAAAGCTTACTCTCAACTTGGACTTGCCCATGACGGAGCTCAGCTTCATGGGAGGGTAGTAAAGCTAGGTATTCAGTTTGATCCGTTTATCAGAAACACAATCTTGTATATGTATGCTAATTGTGGGTTTCTGGATGAAGCTCGTCGAATGTTTAACCAACAAATGGAATTCGATGTCGTTGCCTGGAATTCCATGATTATGGGTCTGGCTAAATGCGGTGAAATTGGTGAGGCGAGGAAGGTGTTCGACAAAATGCCTGTTAGAAACCCAGTCTCTTGGAATTCAATGATTGGTGGGCATGTGAGAAATGGGATGTTCAAAGAAGCCCTGAAGCTGTTTGTCAAAATGCAAGAACAGAGAATCCGGCCTAGTGAGTATACAATGGTGAGCTTGTTAAATGCGTCAGCCCAAATTGGAGCACTCAAGCAAGGGGAATGGATTCACGAATACATAAAGAAGAACAATGTAGAGTTGAATTCCATTGTCGTTACAGCAATCATAGACATGTACAGCAAATGTGGTAGCATAGGGAAGGCCCTCCAAGTGTTTGAGAAAATACCCAACAGAGCATTATCCAGTTGGAACTCCATGATCTTTGGGCTGGCAGTGAATGGGTGCGAAAACGAAGCGGTTGTGTTGTTCAAAATGCTGGAATCTTCTTCTAATCTCAAACCAGATTCAGTTAGCTTTATGGCTGTATTAACAGCCTGCAATCACGGTGCAATGGTGGATGAAGGCAGGGGATTTTTCTCGCTGATGACAAACACATACAGAATGGAAGCATCAATAAAACACTACAATATAATGGTGGACATGCTCGGGCGAGCTGGGTTTCTGGAAGAAGCAGAGCAGTTGATAGAAACGATGCCGATGGAGGCAGATTCAATCATATGGGGGTGTCTACTGTCAGCTTGTAGAACATATGGGAACACAGAAATGGGAAAGAGAGCAGCAGAGAAAGTGAAGGAATTGGACCCAGATGAGAGCATGGGTTATGTTGTTATGGCGAATATTCAGGCGTCGACAAATGACTTCGTGGGAGCAATGGAGGAAAGGGTTTCAATGAGGATGAAGAAGGTGAAGAAAGAAGCAGGGTGCAGTGTGATTGAAGTGGATGATGAAGTTCATGAGTTCATAGCTGGTGGAGGGAGGTTGCATCCTAAAGCTCGAGAGATCTACCTTGTATTGGATGAATTGGGAGTAATTCTAGGAGATGAAACAAAGGAATGTGGAGATTTAGAGTTCATCAATGCACTACAAATCTACTCCAATTGA

mRNA sequence

ATGAGAGACCTGCAACAGATTCACGCCCACCTCATCAAATCCGGCAGGGCCAAAGACTCTTTTGCTGCCAGTCGTGTTTTGGCCTTCTGCGCCTCCCCGTTGGGCAATATGGACTACGCATATCTGGTTTTTAAGCAAATGCAAAACCCTAATGTTTTTTGTTGGAATACAATAATAAGAGGCTTCTCGCGAAGCTCAAACCCTCAAATGGCTCTTTATCTTTTCATCCACATGTTGGTTTCTTCGCAAATAGAACCGCAAAGATTGACTTACCCATCAGTCTTCAAAGCTTACTCTCAACTTGGACTTGCCCATGACGGAGCTCAGCTTCATGGGAGGGTAGTAAAGCTAGGTATTCAGTTTGATCCGTTTATCAGAAACACAATCTTGTATATGTATGCTAATTGTGGGTTTCTGGATGAAGCTCGTCGAATGTTTAACCAACAAATGGAATTCGATGTCGTTGCCTGGAATTCCATGATTATGGGTCTGGCTAAATGCGGTGAAATTGGTGAGGCGAGGAAGGTGTTCGACAAAATGCCTGTTAGAAACCCAGTCTCTTGGAATTCAATGATTGGTGGGCATGTGAGAAATGGGATGTTCAAAGAAGCCCTGAAGCTGTTTGTCAAAATGCAAGAACAGAGAATCCGGCCTAGTGAGTATACAATGGTGAGCTTGTTAAATGCGTCAGCCCAAATTGGAGCACTCAAGCAAGGGGAATGGATTCACGAATACATAAAGAAGAACAATGTAGAGTTGAATTCCATTGTCGTTACAGCAATCATAGACATGTACAGCAAATGTGGTAGCATAGGGAAGGCCCTCCAAGTGTTTGAGAAAATACCCAACAGAGCATTATCCAGTTGGAACTCCATGATCTTTGGGCTGGCAGTGAATGGGTGCGAAAACGAAGCGGTTGTGTTGTTCAAAATGCTGGAATCTTCTTCTAATCTCAAACCAGATTCAGTTAGCTTTATGGCTGTATTAACAGCCTGCAATCACGGTGCAATGGTGGATGAAGGCAGGGGATTTTTCTCGCTGATGACAAACACATACAGAATGGAAGCATCAATAAAACACTACAATATAATGGTGGACATGCTCGGGCGAGCTGGGTTTCTGGAAGAAGCAGAGCAGTTGATAGAAACGATGCCGATGGAGGCAGATTCAATCATATGGGGGTGTCTACTGTCAGCTTGTAGAACATATGGGAACACAGAAATGGGAAAGAGAGCAGCAGAGAAAGTGAAGGAATTGGACCCAGATGAGAGCATGGGTTATGTTGTTATGGCGAATATTCAGGCGTCGACAAATGACTTCGTGGGAGCAATGGAGGAAAGGGTTTCAATGAGGATGAAGAAGGTGAAGAAAGAAGCAGGGTGCAGTGTGATTGAAGTGGATGATGAAGTTCATGAGTTCATAGCTGGTGGAGGGAGGTTGCATCCTAAAGCTCGAGAGATCTACCTTGTATTGGATGAATTGGGAGTAATTCTAGGAGATGAAACAAAGGAATGTGGAGATTTAGAGTTCATCAATGCACTACAAATCTACTCCAATTGA

Coding sequence (CDS)

ATGAGAGACCTGCAACAGATTCACGCCCACCTCATCAAATCCGGCAGGGCCAAAGACTCTTTTGCTGCCAGTCGTGTTTTGGCCTTCTGCGCCTCCCCGTTGGGCAATATGGACTACGCATATCTGGTTTTTAAGCAAATGCAAAACCCTAATGTTTTTTGTTGGAATACAATAATAAGAGGCTTCTCGCGAAGCTCAAACCCTCAAATGGCTCTTTATCTTTTCATCCACATGTTGGTTTCTTCGCAAATAGAACCGCAAAGATTGACTTACCCATCAGTCTTCAAAGCTTACTCTCAACTTGGACTTGCCCATGACGGAGCTCAGCTTCATGGGAGGGTAGTAAAGCTAGGTATTCAGTTTGATCCGTTTATCAGAAACACAATCTTGTATATGTATGCTAATTGTGGGTTTCTGGATGAAGCTCGTCGAATGTTTAACCAACAAATGGAATTCGATGTCGTTGCCTGGAATTCCATGATTATGGGTCTGGCTAAATGCGGTGAAATTGGTGAGGCGAGGAAGGTGTTCGACAAAATGCCTGTTAGAAACCCAGTCTCTTGGAATTCAATGATTGGTGGGCATGTGAGAAATGGGATGTTCAAAGAAGCCCTGAAGCTGTTTGTCAAAATGCAAGAACAGAGAATCCGGCCTAGTGAGTATACAATGGTGAGCTTGTTAAATGCGTCAGCCCAAATTGGAGCACTCAAGCAAGGGGAATGGATTCACGAATACATAAAGAAGAACAATGTAGAGTTGAATTCCATTGTCGTTACAGCAATCATAGACATGTACAGCAAATGTGGTAGCATAGGGAAGGCCCTCCAAGTGTTTGAGAAAATACCCAACAGAGCATTATCCAGTTGGAACTCCATGATCTTTGGGCTGGCAGTGAATGGGTGCGAAAACGAAGCGGTTGTGTTGTTCAAAATGCTGGAATCTTCTTCTAATCTCAAACCAGATTCAGTTAGCTTTATGGCTGTATTAACAGCCTGCAATCACGGTGCAATGGTGGATGAAGGCAGGGGATTTTTCTCGCTGATGACAAACACATACAGAATGGAAGCATCAATAAAACACTACAATATAATGGTGGACATGCTCGGGCGAGCTGGGTTTCTGGAAGAAGCAGAGCAGTTGATAGAAACGATGCCGATGGAGGCAGATTCAATCATATGGGGGTGTCTACTGTCAGCTTGTAGAACATATGGGAACACAGAAATGGGAAAGAGAGCAGCAGAGAAAGTGAAGGAATTGGACCCAGATGAGAGCATGGGTTATGTTGTTATGGCGAATATTCAGGCGTCGACAAATGACTTCGTGGGAGCAATGGAGGAAAGGGTTTCAATGAGGATGAAGAAGGTGAAGAAAGAAGCAGGGTGCAGTGTGATTGAAGTGGATGATGAAGTTCATGAGTTCATAGCTGGTGGAGGGAGGTTGCATCCTAAAGCTCGAGAGATCTACCTTGTATTGGATGAATTGGGAGTAATTCTAGGAGATGAAACAAAGGAATGTGGAGATTTAGAGTTCATCAATGCACTACAAATCTACTCCAATTGA

Protein sequence

MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIRGFSRSSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQFDPFIRNTILYMYANCGFLDEARRMFNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDKMPVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGEWIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNGCENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKHYNIMVDMLGRAGFLEEAEQLIETMPMEADSIIWGCLLSACRTYGNTEMGKRAAEKVKELDPDESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGRLHPKAREIYLVLDELGVILGDETKECGDLEFINALQIYSN
Homology
BLAST of Carg04667 vs. NCBI nr
Match: KAG7022997.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1048.1 bits (2709), Expect = 2.5e-302
Identity = 519/519 (100.00%), Postives = 519/519 (100.00%), Query Frame = 0

Query: 1   MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIR 60
           MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIR
Sbjct: 1   MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIR 60

Query: 61  GFSRSSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQ 120
           GFSRSSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQ
Sbjct: 61  GFSRSSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQ 120

Query: 121 FDPFIRNTILYMYANCGFLDEARRMFNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDKM 180
           FDPFIRNTILYMYANCGFLDEARRMFNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDKM
Sbjct: 121 FDPFIRNTILYMYANCGFLDEARRMFNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDKM 180

Query: 181 PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGE 240
           PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGE
Sbjct: 181 PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGE 240

Query: 241 WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG 300
           WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG
Sbjct: 241 WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG 300

Query: 301 CENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKH 360
           CENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKH
Sbjct: 301 CENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKH 360

Query: 361 YNIMVDMLGRAGFLEEAEQLIETMPMEADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD 420
           YNIMVDMLGRAGFLEEAEQLIETMPMEADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD
Sbjct: 361 YNIMVDMLGRAGFLEEAEQLIETMPMEADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD 420

Query: 421 PDESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGRL 480
           PDESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGRL
Sbjct: 421 PDESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGRL 480

Query: 481 HPKAREIYLVLDELGVILGDETKECGDLEFINALQIYSN 520
           HPKAREIYLVLDELGVILGDETKECGDLEFINALQIYSN
Sbjct: 481 HPKAREIYLVLDELGVILGDETKECGDLEFINALQIYSN 519

BLAST of Carg04667 vs. NCBI nr
Match: KAG6589301.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1042.7 bits (2695), Expect = 1.0e-300
Identity = 516/519 (99.42%), Postives = 518/519 (99.81%), Query Frame = 0

Query: 1   MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIR 60
           MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIR
Sbjct: 37  MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIR 96

Query: 61  GFSRSSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQ 120
           GFSRSSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQ
Sbjct: 97  GFSRSSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQ 156

Query: 121 FDPFIRNTILYMYANCGFLDEARRMFNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDKM 180
           FDPFIRNTILYMYANCGFLDEARR+FNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDKM
Sbjct: 157 FDPFIRNTILYMYANCGFLDEARRIFNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDKM 216

Query: 181 PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGE 240
           PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGE
Sbjct: 217 PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGE 276

Query: 241 WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG 300
           WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG
Sbjct: 277 WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG 336

Query: 301 CENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKH 360
           CENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKH
Sbjct: 337 CENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKH 396

Query: 361 YNIMVDMLGRAGFLEEAEQLIETMPMEADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD 420
           YNIMVDMLGRAGFLEEAEQLIETMP+EADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD
Sbjct: 397 YNIMVDMLGRAGFLEEAEQLIETMPIEADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD 456

Query: 421 PDESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGRL 480
           PDESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGR 
Sbjct: 457 PDESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGRS 516

Query: 481 HPKAREIYLVLDELGVILGDETKECGDLEFINALQIYSN 520
           HPKAREIYLVLDELGVILGDETKECGDLEFINALQIYSN
Sbjct: 517 HPKAREIYLVLDELGVILGDETKECGDLEFINALQIYSN 555

BLAST of Carg04667 vs. NCBI nr
Match: XP_022930672.1 (pentatricopeptide repeat-containing protein At2g42920, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1036.9 bits (2680), Expect = 5.7e-299
Identity = 513/519 (98.84%), Postives = 517/519 (99.61%), Query Frame = 0

Query: 1   MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIR 60
           MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIR
Sbjct: 37  MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIR 96

Query: 61  GFSRSSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQ 120
           GFS+SSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQ
Sbjct: 97  GFSQSSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQ 156

Query: 121 FDPFIRNTILYMYANCGFLDEARRMFNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDKM 180
           FDPFIRNTILYMYANCGFLD ARR+FNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDKM
Sbjct: 157 FDPFIRNTILYMYANCGFLDGARRIFNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDKM 216

Query: 181 PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGE 240
           PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGE
Sbjct: 217 PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGE 276

Query: 241 WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG 300
           WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG
Sbjct: 277 WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG 336

Query: 301 CENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKH 360
           CENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKH
Sbjct: 337 CENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKH 396

Query: 361 YNIMVDMLGRAGFLEEAEQLIETMPMEADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD 420
           YNIMVDMLGRAGFLEEAEQLIETMP+EADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD
Sbjct: 397 YNIMVDMLGRAGFLEEAEQLIETMPIEADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD 456

Query: 421 PDESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGRL 480
           P+ESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGR 
Sbjct: 457 PEESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGRS 516

Query: 481 HPKAREIYLVLDELGVILGDETKECGDLEFINALQIYSN 520
           HPKAREIYLVLDELGVILGDETKECGDLEFINALQIYSN
Sbjct: 517 HPKAREIYLVLDELGVILGDETKECGDLEFINALQIYSN 555

BLAST of Carg04667 vs. NCBI nr
Match: XP_023530494.1 (pentatricopeptide repeat-containing protein At2g42920, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1031.2 bits (2665), Expect = 3.1e-297
Identity = 509/519 (98.07%), Postives = 517/519 (99.61%), Query Frame = 0

Query: 1   MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIR 60
           MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIR
Sbjct: 37  MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIR 96

Query: 61  GFSRSSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQ 120
           GFS+SSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRV+KLGIQ
Sbjct: 97  GFSQSSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVLKLGIQ 156

Query: 121 FDPFIRNTILYMYANCGFLDEARRMFNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDKM 180
           FDPFIRNTILYMYANCGFLDEARR+FNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDKM
Sbjct: 157 FDPFIRNTILYMYANCGFLDEARRIFNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDKM 216

Query: 181 PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGE 240
           PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGE
Sbjct: 217 PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGE 276

Query: 241 WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG 300
           WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG
Sbjct: 277 WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG 336

Query: 301 CENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKH 360
           CENEAV+LFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKH
Sbjct: 337 CENEAVMLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKH 396

Query: 361 YNIMVDMLGRAGFLEEAEQLIETMPMEADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD 420
           YNIMVD+LGRAGFLEEAEQLIETMP+EADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD
Sbjct: 397 YNIMVDILGRAGFLEEAEQLIETMPVEADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD 456

Query: 421 PDESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGRL 480
           P+ESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGR 
Sbjct: 457 PEESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGRS 516

Query: 481 HPKAREIYLVLDELGVILGDETKECGDLEFINALQIYSN 520
           +PKAREIYLVLDELGVILGDET ECGDLEFINALQIYSN
Sbjct: 517 NPKAREIYLVLDELGVILGDETNECGDLEFINALQIYSN 555

BLAST of Carg04667 vs. NCBI nr
Match: XP_022989190.1 (pentatricopeptide repeat-containing protein At2g42920, chloroplastic [Cucurbita maxima])

HSP 1 Score: 1012.3 bits (2616), Expect = 1.5e-291
Identity = 500/519 (96.34%), Postives = 510/519 (98.27%), Query Frame = 0

Query: 1   MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIR 60
           MRDLQQIHAHLIKSGRAK+SFAASRVLAFCASPLGNMDYAYLVFKQMQNPN+FCWNTIIR
Sbjct: 37  MRDLQQIHAHLIKSGRAKESFAASRVLAFCASPLGNMDYAYLVFKQMQNPNIFCWNTIIR 96

Query: 61  GFSRSSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQ 120
           GFS+SSNPQMALYLFIHMLVSSQIEP RLTYPSVFKAYSQLGLAHDG QLHGRVVKLGIQ
Sbjct: 97  GFSQSSNPQMALYLFIHMLVSSQIEPHRLTYPSVFKAYSQLGLAHDGTQLHGRVVKLGIQ 156

Query: 121 FDPFIRNTILYMYANCGFLDEARRMFNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDKM 180
           FDPFIRNTILYMYANCGFL+EARR+FNQ MEFDVVAWNSMI GLAKCGEI EARKVFDKM
Sbjct: 157 FDPFIRNTILYMYANCGFLNEARRIFNQLMEFDVVAWNSMITGLAKCGEIDEARKVFDKM 216

Query: 181 PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGE 240
           PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRI+PSEYTMVSLLNASAQIGALKQGE
Sbjct: 217 PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIQPSEYTMVSLLNASAQIGALKQGE 276

Query: 241 WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG 300
           WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG
Sbjct: 277 WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG 336

Query: 301 CENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKH 360
           CENEAV+LFKMLESSSNLKPDSVSFMAVLTACNH AMVDEGRGFFSLMTNTYRMEASIKH
Sbjct: 337 CENEAVMLFKMLESSSNLKPDSVSFMAVLTACNHSAMVDEGRGFFSLMTNTYRMEASIKH 396

Query: 361 YNIMVDMLGRAGFLEEAEQLIETMPMEADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD 420
           YNIMVDMLGRAGFLEEAE+LIETMP+EADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD
Sbjct: 397 YNIMVDMLGRAGFLEEAEELIETMPIEADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD 456

Query: 421 PDESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGRL 480
           P+ESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGR 
Sbjct: 457 PEESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGRR 516

Query: 481 HPKAREIYLVLDELGVILGDETKECGDLEFINALQIYSN 520
           HPKAREIYLVLDELGVILGDET E GDLEFINALQIYSN
Sbjct: 517 HPKAREIYLVLDELGVILGDETNEWGDLEFINALQIYSN 555

BLAST of Carg04667 vs. ExPASy Swiss-Prot
Match: Q9SJG6 (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E75 PE=2 SV=1)

HSP 1 Score: 582.4 bits (1500), Expect = 5.0e-165
Identity = 298/495 (60.20%), Postives = 367/495 (74.14%), Query Frame = 0

Query: 1   MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIR 60
           MR+L+QIHA LIK+G   D+  ASRVLAFC +   +M+YAYLVF ++ + N F WNTIIR
Sbjct: 38  MRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIR 97

Query: 61  GFSRSSNPQMALYLFIHMLVSS-QIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGI 120
           GFSRSS P+MA+ +FI ML SS  ++PQRLTYPSVFKAY +LG A DG QLHG V+K G+
Sbjct: 98  GFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGL 157

Query: 121 QFDPFIRNTILYMYANCGFLDEARRMFNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDK 180
           + D FIRNT+L+MY  CG L EA R+F   + FDVVAWNSMIMG AKCG I +A+ +FD+
Sbjct: 158 EDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDE 217

Query: 181 MPVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQG 240
           MP RN VSWNSMI G VRNG FK+AL +F +MQE+ ++P  +TMVSLLNA A +GA +QG
Sbjct: 218 MPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQG 277

Query: 241 EWIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVN 300
            WIHEYI +N  ELNSIVVTA+IDMY KCG I + L VFE  P + LS WNSMI GLA N
Sbjct: 278 RWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANN 337

Query: 301 GCENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIK 360
           G E  A+ LF  LE  S L+PDSVSF+ VLTAC H   V     FF LM   Y +E SIK
Sbjct: 338 GFEERAMDLFSELE-RSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIK 397

Query: 361 HYNIMVDMLGRAGFLEEAEQLIETMPMEADSIIWGCLLSACRTYGNTEMGKRAAEKVKEL 420
           HY +MV++LG AG LEEAE LI+ MP+E D++IW  LLSACR  GN EM KRAA+ +K+L
Sbjct: 398 HYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKL 457

Query: 421 DPDESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGR 480
           DPDE+ GYV+++N  AS   F  A+E+R+ M+ ++++KE GCS IEVD EVHEFI+ GG 
Sbjct: 458 DPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGG- 517

Query: 481 LHPKAREIYLVLDEL 495
            HPK+ EIY +LD L
Sbjct: 518 THPKSAEIYSLLDIL 530

BLAST of Carg04667 vs. ExPASy Swiss-Prot
Match: Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 3.5e-118
Identity = 210/513 (40.94%), Postives = 330/513 (64.33%), Query Frame = 0

Query: 1   MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASP---LGNMDYAYLVFKQMQNPNVFCWNT 60
           +RDL QIHA  IKSG+ +D+ AA+ +L FCA+      ++DYA+ +F QM   N F WNT
Sbjct: 36  IRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNT 95

Query: 61  IIRGFSRSSNPQ--MALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVV 120
           IIRGFS S   +  +A+ LF  M+    +EP R T+PSV KA ++ G   +G Q+HG  +
Sbjct: 96  IIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLAL 155

Query: 121 KLGIQFDPFIRNTILYMYANCGFLDEARRMF--------------NQQMEFDVVAWNSMI 180
           K G   D F+ + ++ MY  CGF+ +AR +F               ++ + ++V WN MI
Sbjct: 156 KYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMI 215

Query: 181 MGLAKCGEIGEARKVFDKMPVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEY 240
            G  + G+   AR +FDKM  R+ VSWN+MI G+  NG FK+A+++F +M++  IRP+  
Sbjct: 216 DGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYV 275

Query: 241 TMVSLLNASAQIGALKQGEWIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKI 300
           T+VS+L A +++G+L+ GEW+H Y + + + ++ ++ +A+IDMYSKCG I KA+ VFE++
Sbjct: 276 TLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERL 335

Query: 301 PNRALSSWNSMIFGLAVNGCENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEG 360
           P   + +W++MI G A++G   +A+  F  +   + ++P  V+++ +LTAC+HG +V+EG
Sbjct: 336 PRENVITWSAMINGFAIHGQAGDAIDCFCKMR-QAGVRPSDVAYINLLTACSHGGLVEEG 395

Query: 361 RGFFSLMTNTYRMEASIKHYNIMVDMLGRAGFLEEAEQLIETMPMEADSIIWGCLLSACR 420
           R +FS M +   +E  I+HY  MVD+LGR+G L+EAE+ I  MP++ D +IW  LL ACR
Sbjct: 396 RRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACR 455

Query: 421 TYGNTEMGKRAAEKVKELDPDESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGC 480
             GN EMGKR A  + ++ P +S  YV ++N+ AS  ++    E R+ M+ K ++K+ GC
Sbjct: 456 MQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGC 515

Query: 481 SVIEVDDEVHEFIAGGGRLHPKAREIYLVLDEL 495
           S+I++D  +HEF+      HPKA+EI  +L E+
Sbjct: 516 SLIDIDGVLHEFVVEDDS-HPKAKEINSMLVEI 546

BLAST of Carg04667 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 3.2e-103
Identity = 190/487 (39.01%), Postives = 301/487 (61.81%), Query Frame = 0

Query: 3   DLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGN--MDYAYLVFKQMQNPNVFCWNTIIR 62
           +L+QIHA ++K+G  +DS+A ++ L+FC S   +  + YA +VF     P+ F WN +IR
Sbjct: 29  ELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIR 88

Query: 63  GFSRSSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQ 122
           GFS S  P+ +L L+  ML SS       T+PS+ KA S L    +  Q+H ++ KLG +
Sbjct: 89  GFSCSDEPERSLLLYQRMLCSS-APHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYE 148

Query: 123 FDPFIRNTILYMYANCGFLDEARRMFNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDKM 182
            D +  N+++  YA  G    A  +F++  E D V+WNS+I G  K G++  A  +F KM
Sbjct: 149 NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM 208

Query: 183 PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGE 242
             +N +SW +MI G+V+  M KEAL+LF +MQ   + P   ++ + L+A AQ+GAL+QG+
Sbjct: 209 AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 268

Query: 243 WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG 302
           WIH Y+ K  + ++S++   +IDMY+KCG + +AL+VF+ I  +++ +W ++I G A +G
Sbjct: 269 WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHG 328

Query: 303 CENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKH 362
              EA+  F  ++    +KP+ ++F AVLTAC++  +V+EG+  F  M   Y ++ +I+H
Sbjct: 329 HGREAISKFMEMQ-KMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEH 388

Query: 363 YNIMVDMLGRAGFLEEAEQLIETMPMEADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD 422
           Y  +VD+LGRAG L+EA++ I+ MP++ +++IWG LL ACR + N E+G+   E +  +D
Sbjct: 389 YGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAID 448

Query: 423 PDESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGRL 482
           P     YV  ANI A    +  A E R  M+ + V K  GCS I ++   HEF+A G R 
Sbjct: 449 PYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLA-GDRS 508

Query: 483 HPKAREI 488
           HP+  +I
Sbjct: 509 HPEIEKI 512

BLAST of Carg04667 vs. ExPASy Swiss-Prot
Match: Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.0e-101
Identity = 193/498 (38.76%), Postives = 306/498 (61.45%), Query Frame = 0

Query: 3   DLQQIHAHLIKSGRAKDSFAASRVLAFCA------SPLGNMDYAYLVFKQMQNPNVFCWN 62
           DL+ IH  L+++    D F ASR+LA C        P   + YAY +F Q+QNPN+F +N
Sbjct: 27  DLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFN 86

Query: 63  TIIRGFSRSSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVK 122
            +IR FS  + P  A   +  ML  S+I P  +T+P + KA S++     G Q H ++V+
Sbjct: 87  LLIRCFSTGAEPSKAFGFYTQML-KSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVR 146

Query: 123 LGIQFDPFIRNTILYMYANCGFLDEARRMFNQQMEFDVVAWNSMIMGLAKCGEIGEARKV 182
            G Q D ++ N++++MYANCGF+  A R+F Q    DVV+W SM+ G  KCG +  AR++
Sbjct: 147 FGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREM 206

Query: 183 FDKMPVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGAL 242
           FD+MP RN  +W+ MI G+ +N  F++A+ LF  M+ + +  +E  MVS++++ A +GAL
Sbjct: 207 FDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGAL 266

Query: 243 KQGEWIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGL 302
           + GE  +EY+ K+++ +N I+ TA++DM+ +CG I KA+ VFE +P     SW+S+I GL
Sbjct: 267 EFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGL 326

Query: 303 AVNGCENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEA 362
           AV+G  ++A+  F  + S   + P  V+F AVL+AC+HG +V++G   +  M   + +E 
Sbjct: 327 AVHGHAHKAMHYFSQMISLGFI-PRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEP 386

Query: 363 SIKHYNIMVDMLGRAGFLEEAEQLIETMPMEADSIIWGCLLSACRTYGNTEMGKRAAEKV 422
            ++HY  +VDMLGRAG L EAE  I  M ++ ++ I G LL AC+ Y NTE+ +R    +
Sbjct: 387 RLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNML 446

Query: 423 KELDPDESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAG 482
            ++ P+ S  YV+++NI A    +      R  M+ K VKK  G S+IE+D ++++F  G
Sbjct: 447 IKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMG 506

Query: 483 GGRLHPKAREIYLVLDEL 495
             + HP+  +I    +E+
Sbjct: 507 DDQKHPEMGKIRRKWEEI 522

BLAST of Carg04667 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 2.2e-99
Identity = 208/596 (34.90%), Postives = 318/596 (53.36%), Query Frame = 0

Query: 4   LQQIHAHLIKSGRAKDSFAASRVLAFCA-SPLGNMDYAYLVFKQMQNPNVFCWNTIIRGF 63
           L+QI A +I +G   D FA+SR++AFCA S    +DY+  + K ++NPN+F WN  IRGF
Sbjct: 69  LKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGF 128

Query: 64  SRSSNPQMALYLFIHMLVSSQIE--PQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQ 123
           S S NP+ +  L+  ML     E  P   TYP +FK  + L L+  G  + G V+KL ++
Sbjct: 129 SESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLE 188

Query: 124 FDPFIRNTILYMYANCGFLDEARRMFNQQMEFDVVAWNSMIMG----------------- 183
               + N  ++M+A+CG ++ AR++F++    D+V+WN +I G                 
Sbjct: 189 LVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLM 248

Query: 184 -----------------------------------------------------LAKCGEI 243
                                                                 +KCG+I
Sbjct: 249 ESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDI 308

Query: 244 GEARKVFDKMPVRNPVSWNSMIGGHVRNGMF----------------------------- 303
            EAR++FD +  R  VSW +MI G+ R G+                              
Sbjct: 309 HEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAK 368

Query: 304 --KEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGEWIHEYIKKNNVELNSIVVT 363
             ++AL LF +MQ    +P E TM+  L+A +Q+GAL  G WIH YI+K ++ LN  + T
Sbjct: 369 RGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGT 428

Query: 364 AIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNGCENEAVVLFKMLESSSNLK 423
           +++DMY+KCG+I +AL VF  I  R   ++ ++I GLA++G  + A+  F  +   + + 
Sbjct: 429 SLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEM-IDAGIA 488

Query: 424 PDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKHYNIMVDMLGRAGFLEEAEQ 483
           PD ++F+ +L+AC HG M+  GR +FS M + + +   +KHY+IMVD+LGRAG LEEA++
Sbjct: 489 PDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADR 548

Query: 484 LIETMPMEADSIIWGCLLSACRTYGNTEMGKRAAEKVKELDPDESMGYVVMANIQASTND 496
           L+E+MPMEAD+ +WG LL  CR +GN E+G++AA+K+ ELDP +S  YV++  +    N 
Sbjct: 549 LMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANM 608

BLAST of Carg04667 vs. ExPASy TrEMBL
Match: A0A6J1ER84 (pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111437074 PE=4 SV=1)

HSP 1 Score: 1036.9 bits (2680), Expect = 2.8e-299
Identity = 513/519 (98.84%), Postives = 517/519 (99.61%), Query Frame = 0

Query: 1   MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIR 60
           MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIR
Sbjct: 37  MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIR 96

Query: 61  GFSRSSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQ 120
           GFS+SSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQ
Sbjct: 97  GFSQSSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQ 156

Query: 121 FDPFIRNTILYMYANCGFLDEARRMFNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDKM 180
           FDPFIRNTILYMYANCGFLD ARR+FNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDKM
Sbjct: 157 FDPFIRNTILYMYANCGFLDGARRIFNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDKM 216

Query: 181 PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGE 240
           PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGE
Sbjct: 217 PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGE 276

Query: 241 WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG 300
           WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG
Sbjct: 277 WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG 336

Query: 301 CENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKH 360
           CENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKH
Sbjct: 337 CENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKH 396

Query: 361 YNIMVDMLGRAGFLEEAEQLIETMPMEADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD 420
           YNIMVDMLGRAGFLEEAEQLIETMP+EADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD
Sbjct: 397 YNIMVDMLGRAGFLEEAEQLIETMPIEADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD 456

Query: 421 PDESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGRL 480
           P+ESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGR 
Sbjct: 457 PEESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGRS 516

Query: 481 HPKAREIYLVLDELGVILGDETKECGDLEFINALQIYSN 520
           HPKAREIYLVLDELGVILGDETKECGDLEFINALQIYSN
Sbjct: 517 HPKAREIYLVLDELGVILGDETKECGDLEFINALQIYSN 555

BLAST of Carg04667 vs. ExPASy TrEMBL
Match: A0A6J1JLQ0 (pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486336 PE=4 SV=1)

HSP 1 Score: 1012.3 bits (2616), Expect = 7.3e-292
Identity = 500/519 (96.34%), Postives = 510/519 (98.27%), Query Frame = 0

Query: 1   MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIR 60
           MRDLQQIHAHLIKSGRAK+SFAASRVLAFCASPLGNMDYAYLVFKQMQNPN+FCWNTIIR
Sbjct: 37  MRDLQQIHAHLIKSGRAKESFAASRVLAFCASPLGNMDYAYLVFKQMQNPNIFCWNTIIR 96

Query: 61  GFSRSSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQ 120
           GFS+SSNPQMALYLFIHMLVSSQIEP RLTYPSVFKAYSQLGLAHDG QLHGRVVKLGIQ
Sbjct: 97  GFSQSSNPQMALYLFIHMLVSSQIEPHRLTYPSVFKAYSQLGLAHDGTQLHGRVVKLGIQ 156

Query: 121 FDPFIRNTILYMYANCGFLDEARRMFNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDKM 180
           FDPFIRNTILYMYANCGFL+EARR+FNQ MEFDVVAWNSMI GLAKCGEI EARKVFDKM
Sbjct: 157 FDPFIRNTILYMYANCGFLNEARRIFNQLMEFDVVAWNSMITGLAKCGEIDEARKVFDKM 216

Query: 181 PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGE 240
           PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRI+PSEYTMVSLLNASAQIGALKQGE
Sbjct: 217 PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIQPSEYTMVSLLNASAQIGALKQGE 276

Query: 241 WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG 300
           WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG
Sbjct: 277 WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG 336

Query: 301 CENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKH 360
           CENEAV+LFKMLESSSNLKPDSVSFMAVLTACNH AMVDEGRGFFSLMTNTYRMEASIKH
Sbjct: 337 CENEAVMLFKMLESSSNLKPDSVSFMAVLTACNHSAMVDEGRGFFSLMTNTYRMEASIKH 396

Query: 361 YNIMVDMLGRAGFLEEAEQLIETMPMEADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD 420
           YNIMVDMLGRAGFLEEAE+LIETMP+EADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD
Sbjct: 397 YNIMVDMLGRAGFLEEAEELIETMPIEADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD 456

Query: 421 PDESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGRL 480
           P+ESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGR 
Sbjct: 457 PEESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGRR 516

Query: 481 HPKAREIYLVLDELGVILGDETKECGDLEFINALQIYSN 520
           HPKAREIYLVLDELGVILGDET E GDLEFINALQIYSN
Sbjct: 517 HPKAREIYLVLDELGVILGDETNEWGDLEFINALQIYSN 555

BLAST of Carg04667 vs. ExPASy TrEMBL
Match: A0A1S3BG64 (pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489661 PE=4 SV=1)

HSP 1 Score: 864.8 bits (2233), Expect = 1.9e-247
Identity = 422/515 (81.94%), Postives = 470/515 (91.26%), Query Frame = 0

Query: 1   MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIR 60
           MRDLQQ HAHLIKSG+A DSFAASR+LAFCASPLGNMDYAYLVF QMQNPN+F WNT+IR
Sbjct: 37  MRDLQQFHAHLIKSGQAIDSFAASRILAFCASPLGNMDYAYLVFLQMQNPNLFSWNTVIR 96

Query: 61  GFSRSSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQ 120
           GFS+SSNPQ+AL LFI MLVSSQ+EPQRLTYPS+FKAYSQLGLA+DGAQLHGR++KLG+Q
Sbjct: 97  GFSQSSNPQIALSLFIDMLVSSQVEPQRLTYPSIFKAYSQLGLAYDGAQLHGRIIKLGLQ 156

Query: 121 FDPFIRNTILYMYANCGFLDEARRMFNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDKM 180
           FDPFIRNTILYMYA  GFL EARR+FNQ+MEFDVV+WNSMI+GLAKCGEI E+RK+FDKM
Sbjct: 157 FDPFIRNTILYMYATGGFLSEARRIFNQEMEFDVVSWNSMILGLAKCGEIDESRKLFDKM 216

Query: 181 PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGE 240
           PV+N +SWNSMIGG+VRNGMFKEALKLF+KMQE+RI+PSE+TMVSLLNASAQIGAL+QGE
Sbjct: 217 PVKNSISWNSMIGGYVRNGMFKEALKLFIKMQEERIQPSEFTMVSLLNASAQIGALRQGE 276

Query: 241 WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG 300
           WIHEYIKKNN++LN+IVVTAIIDMY KCGSIG ALQVFEKIPNR LSSWNSMIFGLAVNG
Sbjct: 277 WIHEYIKKNNLQLNAIVVTAIIDMYCKCGSIGNALQVFEKIPNRGLSSWNSMIFGLAVNG 336

Query: 301 CENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKH 360
           CE EA++LFKMLESSS LKPDS+SFMAVLTACNHGAMVDEG  FFS M NTYR+E SIKH
Sbjct: 337 CEKEAILLFKMLESSS-LKPDSISFMAVLTACNHGAMVDEGMRFFSRMKNTYRIEPSIKH 396

Query: 361 YNIMVDMLGRAGFLEEAEQLIETMPMEADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD 420
           YN+MVDM+ RAGFLEEAEQ I+TMPME D+IIWGCLLSACR YGNTEM KRAAEKV ELD
Sbjct: 397 YNLMVDMISRAGFLEEAEQFIKTMPMEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELD 456

Query: 421 PDESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGRL 480
           P+E+MGYV+MANI A  N+FVGAME+RV+MRMKKV+KE G S+IEVDDEVHEFIA GGRL
Sbjct: 457 PEETMGYVLMANIHAWRNNFVGAMEKRVAMRMKKVEKEPGGSLIEVDDEVHEFIAAGGRL 516

Query: 481 HPKAREIYLVLDELGVILGD--------ETKECGD 508
           H KA+EIYLVLD+LGV+L D        E  ECGD
Sbjct: 517 HRKAQEIYLVLDQLGVMLQDKGAFGEEFEINECGD 550

BLAST of Carg04667 vs. ExPASy TrEMBL
Match: A0A5A7SN44 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00010 PE=4 SV=1)

HSP 1 Score: 863.2 bits (2229), Expect = 5.5e-247
Identity = 421/515 (81.75%), Postives = 469/515 (91.07%), Query Frame = 0

Query: 1   MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIR 60
           MRDLQQ HAHLIKSG+A DSFAASR+LAFCASPLGNMDYAYLVF QMQNPN+F WNT+IR
Sbjct: 37  MRDLQQFHAHLIKSGQAIDSFAASRILAFCASPLGNMDYAYLVFLQMQNPNLFSWNTVIR 96

Query: 61  GFSRSSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQ 120
           GFS+SSNPQ+AL LFI MLVSSQ+EPQRLTYPS+FKAYSQLGLA+DGAQLHGR++KLG+Q
Sbjct: 97  GFSQSSNPQIALSLFIDMLVSSQVEPQRLTYPSIFKAYSQLGLAYDGAQLHGRIIKLGLQ 156

Query: 121 FDPFIRNTILYMYANCGFLDEARRMFNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDKM 180
           FDPFIRNTILYMYA  GFL EARR+FNQ+MEFDVV+WNSMI+GLAKCGEI E+RK+FDKM
Sbjct: 157 FDPFIRNTILYMYATGGFLSEARRIFNQEMEFDVVSWNSMILGLAKCGEIDESRKLFDKM 216

Query: 181 PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGE 240
           PV+N +SWNSMIGG+VRNGMFKEALKLF+KMQE+RI+PSE+TMVSLLNASAQIGAL+QGE
Sbjct: 217 PVKNSISWNSMIGGYVRNGMFKEALKLFIKMQEERIQPSEFTMVSLLNASAQIGALRQGE 276

Query: 241 WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG 300
           WIHEYIKKNN++LN+IVVTAIIDMY KCGSIG ALQVFEKIPNR LSSWNSMIFGLAVNG
Sbjct: 277 WIHEYIKKNNLQLNAIVVTAIIDMYCKCGSIGNALQVFEKIPNRGLSSWNSMIFGLAVNG 336

Query: 301 CENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKH 360
           CE EA++LFKMLESSS LKPDS+SFMAVLTACNHGAMVDEG  FFS M NTYR+E SIKH
Sbjct: 337 CEKEAILLFKMLESSS-LKPDSISFMAVLTACNHGAMVDEGMRFFSRMKNTYRIEPSIKH 396

Query: 361 YNIMVDMLGRAGFLEEAEQLIETMPMEADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD 420
           YN+MVDM+ R GFLEEAEQ I+TMPME D+IIWGCLLSACR YGNTEM KRAAEKV ELD
Sbjct: 397 YNLMVDMISRGGFLEEAEQFIKTMPMEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELD 456

Query: 421 PDESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGRL 480
           P+E+MGYV+MANI A  N+FVGAME+RV+MRMKKV+KE G S+IEVDDEVHEFIA GGRL
Sbjct: 457 PEETMGYVLMANIHAWRNNFVGAMEKRVAMRMKKVEKEPGGSLIEVDDEVHEFIAAGGRL 516

Query: 481 HPKAREIYLVLDELGVILGD--------ETKECGD 508
           H KA+EIYLVLD+LGV+L D        E  ECGD
Sbjct: 517 HRKAQEIYLVLDQLGVMLQDKGAFGEEFEINECGD 550

BLAST of Carg04667 vs. ExPASy TrEMBL
Match: A0A0A0K7F6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G235760 PE=4 SV=1)

HSP 1 Score: 853.2 bits (2203), Expect = 5.7e-244
Identity = 412/501 (82.24%), Postives = 465/501 (92.81%), Query Frame = 0

Query: 1   MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIR 60
           MRDLQQ HAHLIKSG+A +SFAASR+LAFCASPLGNMDYAYLVF QMQNPN+F WNT+IR
Sbjct: 37  MRDLQQFHAHLIKSGQAIESFAASRILAFCASPLGNMDYAYLVFLQMQNPNLFSWNTVIR 96

Query: 61  GFSRSSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQ 120
           GFS+SSNPQ+ALYLFI MLVSSQ+EPQRLTYPS+FKAYSQLGLAHDGAQLHGR++KLG+Q
Sbjct: 97  GFSQSSNPQIALYLFIDMLVSSQVEPQRLTYPSIFKAYSQLGLAHDGAQLHGRIIKLGLQ 156

Query: 121 FDPFIRNTILYMYANCGFLDEARRMFNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDKM 180
           FDPFIRNTILYMYA  GFL EARR+FNQ+MEFDVV+WNSMI+GLAKCGEI E+RK+FDKM
Sbjct: 157 FDPFIRNTILYMYATGGFLSEARRIFNQEMEFDVVSWNSMILGLAKCGEIDESRKLFDKM 216

Query: 181 PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGE 240
           PV+NP+SWNSMIGG+VRNGMFKEALKLF+KMQE+RI+PSE+TMVSLLNASAQIGAL+QG 
Sbjct: 217 PVKNPISWNSMIGGYVRNGMFKEALKLFIKMQEERIQPSEFTMVSLLNASAQIGALRQGV 276

Query: 241 WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG 300
           WIHEYIKKNN++LN+IVVTAIIDMY KCGSIG ALQVFEKIP R+LSSWNSMIFGLAVNG
Sbjct: 277 WIHEYIKKNNLQLNAIVVTAIIDMYCKCGSIGNALQVFEKIPCRSLSSWNSMIFGLAVNG 336

Query: 301 CENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKH 360
           CE EA+++FKMLESSS LKPD +SFMAVLTACNHGAMVDEG  FFS M NTYR+E SIKH
Sbjct: 337 CEKEAILVFKMLESSS-LKPDCISFMAVLTACNHGAMVDEGMEFFSRMKNTYRIEPSIKH 396

Query: 361 YNIMVDMLGRAGFLEEAEQLIETMPMEADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD 420
           YN+MVDM+ RAGFLEEAEQ I+TMP+E D+IIWGCLLSACR YGNTEM KRAAEKV ELD
Sbjct: 397 YNLMVDMISRAGFLEEAEQFIKTMPIEKDAIIWGCLLSACRIYGNTEMAKRAAEKVNELD 456

Query: 421 PDESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGRL 480
           P+E+MGYV+MANI A  N+FVGAME+RV+MRMKKV+KE G S IEVD+EVHEFIAGGGRL
Sbjct: 457 PEETMGYVLMANIHAWGNNFVGAMEKRVAMRMKKVEKEPGGSFIEVDEEVHEFIAGGGRL 516

Query: 481 HPKAREIYLVLDELGVILGDE 502
           H KA+EIY+VL +LGV+L D+
Sbjct: 517 HRKAQEIYIVLGQLGVMLQDK 536

BLAST of Carg04667 vs. TAIR 10
Match: AT2G42920.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 582.4 bits (1500), Expect = 3.6e-166
Identity = 298/495 (60.20%), Postives = 367/495 (74.14%), Query Frame = 0

Query: 1   MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIR 60
           MR+L+QIHA LIK+G   D+  ASRVLAFC +   +M+YAYLVF ++ + N F WNTIIR
Sbjct: 38  MRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIR 97

Query: 61  GFSRSSNPQMALYLFIHMLVSS-QIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGI 120
           GFSRSS P+MA+ +FI ML SS  ++PQRLTYPSVFKAY +LG A DG QLHG V+K G+
Sbjct: 98  GFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGL 157

Query: 121 QFDPFIRNTILYMYANCGFLDEARRMFNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDK 180
           + D FIRNT+L+MY  CG L EA R+F   + FDVVAWNSMIMG AKCG I +A+ +FD+
Sbjct: 158 EDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDE 217

Query: 181 MPVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQG 240
           MP RN VSWNSMI G VRNG FK+AL +F +MQE+ ++P  +TMVSLLNA A +GA +QG
Sbjct: 218 MPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQG 277

Query: 241 EWIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVN 300
            WIHEYI +N  ELNSIVVTA+IDMY KCG I + L VFE  P + LS WNSMI GLA N
Sbjct: 278 RWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANN 337

Query: 301 GCENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIK 360
           G E  A+ LF  LE  S L+PDSVSF+ VLTAC H   V     FF LM   Y +E SIK
Sbjct: 338 GFEERAMDLFSELE-RSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIK 397

Query: 361 HYNIMVDMLGRAGFLEEAEQLIETMPMEADSIIWGCLLSACRTYGNTEMGKRAAEKVKEL 420
           HY +MV++LG AG LEEAE LI+ MP+E D++IW  LLSACR  GN EM KRAA+ +K+L
Sbjct: 398 HYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKL 457

Query: 421 DPDESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGR 480
           DPDE+ GYV+++N  AS   F  A+E+R+ M+ ++++KE GCS IEVD EVHEFI+ GG 
Sbjct: 458 DPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGG- 517

Query: 481 LHPKAREIYLVLDEL 495
            HPK+ EIY +LD L
Sbjct: 518 THPKSAEIYSLLDIL 530

BLAST of Carg04667 vs. TAIR 10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 426.8 bits (1096), Expect = 2.5e-119
Identity = 210/513 (40.94%), Postives = 330/513 (64.33%), Query Frame = 0

Query: 1   MRDLQQIHAHLIKSGRAKDSFAASRVLAFCASP---LGNMDYAYLVFKQMQNPNVFCWNT 60
           +RDL QIHA  IKSG+ +D+ AA+ +L FCA+      ++DYA+ +F QM   N F WNT
Sbjct: 36  IRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNT 95

Query: 61  IIRGFSRSSNPQ--MALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVV 120
           IIRGFS S   +  +A+ LF  M+    +EP R T+PSV KA ++ G   +G Q+HG  +
Sbjct: 96  IIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLAL 155

Query: 121 KLGIQFDPFIRNTILYMYANCGFLDEARRMF--------------NQQMEFDVVAWNSMI 180
           K G   D F+ + ++ MY  CGF+ +AR +F               ++ + ++V WN MI
Sbjct: 156 KYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMI 215

Query: 181 MGLAKCGEIGEARKVFDKMPVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEY 240
            G  + G+   AR +FDKM  R+ VSWN+MI G+  NG FK+A+++F +M++  IRP+  
Sbjct: 216 DGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYV 275

Query: 241 TMVSLLNASAQIGALKQGEWIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKI 300
           T+VS+L A +++G+L+ GEW+H Y + + + ++ ++ +A+IDMYSKCG I KA+ VFE++
Sbjct: 276 TLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERL 335

Query: 301 PNRALSSWNSMIFGLAVNGCENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEG 360
           P   + +W++MI G A++G   +A+  F  +   + ++P  V+++ +LTAC+HG +V+EG
Sbjct: 336 PRENVITWSAMINGFAIHGQAGDAIDCFCKMR-QAGVRPSDVAYINLLTACSHGGLVEEG 395

Query: 361 RGFFSLMTNTYRMEASIKHYNIMVDMLGRAGFLEEAEQLIETMPMEADSIIWGCLLSACR 420
           R +FS M +   +E  I+HY  MVD+LGR+G L+EAE+ I  MP++ D +IW  LL ACR
Sbjct: 396 RRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACR 455

Query: 421 TYGNTEMGKRAAEKVKELDPDESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGC 480
             GN EMGKR A  + ++ P +S  YV ++N+ AS  ++    E R+ M+ K ++K+ GC
Sbjct: 456 MQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGC 515

Query: 481 SVIEVDDEVHEFIAGGGRLHPKAREIYLVLDEL 495
           S+I++D  +HEF+      HPKA+EI  +L E+
Sbjct: 516 SLIDIDGVLHEFVVEDDS-HPKAKEINSMLVEI 546

BLAST of Carg04667 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 377.1 bits (967), Expect = 2.3e-104
Identity = 190/487 (39.01%), Postives = 301/487 (61.81%), Query Frame = 0

Query: 3   DLQQIHAHLIKSGRAKDSFAASRVLAFCASPLGN--MDYAYLVFKQMQNPNVFCWNTIIR 62
           +L+QIHA ++K+G  +DS+A ++ L+FC S   +  + YA +VF     P+ F WN +IR
Sbjct: 29  ELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIR 88

Query: 63  GFSRSSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQ 122
           GFS S  P+ +L L+  ML SS       T+PS+ KA S L    +  Q+H ++ KLG +
Sbjct: 89  GFSCSDEPERSLLLYQRMLCSS-APHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYE 148

Query: 123 FDPFIRNTILYMYANCGFLDEARRMFNQQMEFDVVAWNSMIMGLAKCGEIGEARKVFDKM 182
            D +  N+++  YA  G    A  +F++  E D V+WNS+I G  K G++  A  +F KM
Sbjct: 149 NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM 208

Query: 183 PVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGE 242
             +N +SW +MI G+V+  M KEAL+LF +MQ   + P   ++ + L+A AQ+GAL+QG+
Sbjct: 209 AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 268

Query: 243 WIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNG 302
           WIH Y+ K  + ++S++   +IDMY+KCG + +AL+VF+ I  +++ +W ++I G A +G
Sbjct: 269 WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHG 328

Query: 303 CENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKH 362
              EA+  F  ++    +KP+ ++F AVLTAC++  +V+EG+  F  M   Y ++ +I+H
Sbjct: 329 HGREAISKFMEMQ-KMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEH 388

Query: 363 YNIMVDMLGRAGFLEEAEQLIETMPMEADSIIWGCLLSACRTYGNTEMGKRAAEKVKELD 422
           Y  +VD+LGRAG L+EA++ I+ MP++ +++IWG LL ACR + N E+G+   E +  +D
Sbjct: 389 YGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAID 448

Query: 423 PDESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAGGGRL 482
           P     YV  ANI A    +  A E R  M+ + V K  GCS I ++   HEF+A G R 
Sbjct: 449 PYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLA-GDRS 508

Query: 483 HPKAREI 488
           HP+  +I
Sbjct: 509 HPEIEKI 512

BLAST of Carg04667 vs. TAIR 10
Match: AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 372.1 bits (954), Expect = 7.3e-103
Identity = 193/498 (38.76%), Postives = 306/498 (61.45%), Query Frame = 0

Query: 3   DLQQIHAHLIKSGRAKDSFAASRVLAFCA------SPLGNMDYAYLVFKQMQNPNVFCWN 62
           DL+ IH  L+++    D F ASR+LA C        P   + YAY +F Q+QNPN+F +N
Sbjct: 27  DLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFN 86

Query: 63  TIIRGFSRSSNPQMALYLFIHMLVSSQIEPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVK 122
            +IR FS  + P  A   +  ML  S+I P  +T+P + KA S++     G Q H ++V+
Sbjct: 87  LLIRCFSTGAEPSKAFGFYTQML-KSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVR 146

Query: 123 LGIQFDPFIRNTILYMYANCGFLDEARRMFNQQMEFDVVAWNSMIMGLAKCGEIGEARKV 182
            G Q D ++ N++++MYANCGF+  A R+F Q    DVV+W SM+ G  KCG +  AR++
Sbjct: 147 FGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREM 206

Query: 183 FDKMPVRNPVSWNSMIGGHVRNGMFKEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGAL 242
           FD+MP RN  +W+ MI G+ +N  F++A+ LF  M+ + +  +E  MVS++++ A +GAL
Sbjct: 207 FDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGAL 266

Query: 243 KQGEWIHEYIKKNNVELNSIVVTAIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGL 302
           + GE  +EY+ K+++ +N I+ TA++DM+ +CG I KA+ VFE +P     SW+S+I GL
Sbjct: 267 EFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGL 326

Query: 303 AVNGCENEAVVLFKMLESSSNLKPDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEA 362
           AV+G  ++A+  F  + S   + P  V+F AVL+AC+HG +V++G   +  M   + +E 
Sbjct: 327 AVHGHAHKAMHYFSQMISLGFI-PRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEP 386

Query: 363 SIKHYNIMVDMLGRAGFLEEAEQLIETMPMEADSIIWGCLLSACRTYGNTEMGKRAAEKV 422
            ++HY  +VDMLGRAG L EAE  I  M ++ ++ I G LL AC+ Y NTE+ +R    +
Sbjct: 387 RLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNML 446

Query: 423 KELDPDESMGYVVMANIQASTNDFVGAMEERVSMRMKKVKKEAGCSVIEVDDEVHEFIAG 482
            ++ P+ S  YV+++NI A    +      R  M+ K VKK  G S+IE+D ++++F  G
Sbjct: 447 IKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMG 506

Query: 483 GGRLHPKAREIYLVLDEL 495
             + HP+  +I    +E+
Sbjct: 507 DDQKHPEMGKIRRKWEEI 522

BLAST of Carg04667 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 364.4 bits (934), Expect = 1.5e-100
Identity = 208/596 (34.90%), Postives = 318/596 (53.36%), Query Frame = 0

Query: 4   LQQIHAHLIKSGRAKDSFAASRVLAFCA-SPLGNMDYAYLVFKQMQNPNVFCWNTIIRGF 63
           L+QI A +I +G   D FA+SR++AFCA S    +DY+  + K ++NPN+F WN  IRGF
Sbjct: 69  LKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGF 128

Query: 64  SRSSNPQMALYLFIHMLVSSQIE--PQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQ 123
           S S NP+ +  L+  ML     E  P   TYP +FK  + L L+  G  + G V+KL ++
Sbjct: 129 SESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLE 188

Query: 124 FDPFIRNTILYMYANCGFLDEARRMFNQQMEFDVVAWNSMIMG----------------- 183
               + N  ++M+A+CG ++ AR++F++    D+V+WN +I G                 
Sbjct: 189 LVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLM 248

Query: 184 -----------------------------------------------------LAKCGEI 243
                                                                 +KCG+I
Sbjct: 249 ESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDI 308

Query: 244 GEARKVFDKMPVRNPVSWNSMIGGHVRNGMF----------------------------- 303
            EAR++FD +  R  VSW +MI G+ R G+                              
Sbjct: 309 HEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAK 368

Query: 304 --KEALKLFVKMQEQRIRPSEYTMVSLLNASAQIGALKQGEWIHEYIKKNNVELNSIVVT 363
             ++AL LF +MQ    +P E TM+  L+A +Q+GAL  G WIH YI+K ++ LN  + T
Sbjct: 369 RGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGT 428

Query: 364 AIIDMYSKCGSIGKALQVFEKIPNRALSSWNSMIFGLAVNGCENEAVVLFKMLESSSNLK 423
           +++DMY+KCG+I +AL VF  I  R   ++ ++I GLA++G  + A+  F  +   + + 
Sbjct: 429 SLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEM-IDAGIA 488

Query: 424 PDSVSFMAVLTACNHGAMVDEGRGFFSLMTNTYRMEASIKHYNIMVDMLGRAGFLEEAEQ 483
           PD ++F+ +L+AC HG M+  GR +FS M + + +   +KHY+IMVD+LGRAG LEEA++
Sbjct: 489 PDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADR 548

Query: 484 LIETMPMEADSIIWGCLLSACRTYGNTEMGKRAAEKVKELDPDESMGYVVMANIQASTND 496
           L+E+MPMEAD+ +WG LL  CR +GN E+G++AA+K+ ELDP +S  YV++  +    N 
Sbjct: 549 LMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANM 608

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7022997.12.5e-302100.00Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
KAG6589301.11.0e-30099.42Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
XP_022930672.15.7e-29998.84pentatricopeptide repeat-containing protein At2g42920, chloroplastic [Cucurbita ... [more]
XP_023530494.13.1e-29798.07pentatricopeptide repeat-containing protein At2g42920, chloroplastic [Cucurbita ... [more]
XP_022989190.11.5e-29196.34pentatricopeptide repeat-containing protein At2g42920, chloroplastic [Cucurbita ... [more]
Match NameE-valueIdentityDescription
Q9SJG65.0e-16560.20Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidop... [more]
Q9FI803.5e-11840.94Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... [more]
Q9FJY73.2e-10339.01Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... [more]
Q9FG161.0e-10138.76Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX... [more]
Q9SJZ32.2e-9934.90Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1ER842.8e-29998.84pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Cucurbit... [more]
A0A6J1JLQ07.3e-29296.34pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Cucurbit... [more]
A0A1S3BG641.9e-24781.94pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Cucumis ... [more]
A0A5A7SN445.5e-24781.75Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A0A0K7F65.7e-24482.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G235760 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G42920.13.6e-16660.20Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT5G48910.12.5e-11940.94Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G66520.12.3e-10439.01Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G06540.17.3e-10338.76Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G22410.11.5e-10034.90SLOW GROWTH 1 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 288..314
e-value: 6.7E-4
score: 19.7
coord: 54..79
e-value: 0.0011
score: 19.1
coord: 155..182
e-value: 2.7E-7
score: 30.4
coord: 127..147
e-value: 0.52
score: 10.7
coord: 258..281
e-value: 0.018
score: 15.2
coord: 360..385
e-value: 4.1E-4
score: 20.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 184..229
e-value: 1.6E-12
score: 47.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 186..220
e-value: 7.5E-10
score: 36.4
coord: 53..86
e-value: 2.5E-4
score: 19.0
coord: 155..181
e-value: 8.5E-6
score: 23.6
coord: 361..386
e-value: 5.9E-4
score: 17.8
coord: 288..321
e-value: 0.003
score: 15.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 153..183
score: 10.490022
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 357..387
score: 8.61564
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 51..86
score: 9.613118
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 254..288
score: 8.670445
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 184..218
score: 13.08785
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 149..248
e-value: 1.2E-26
score: 95.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..148
e-value: 1.9E-22
score: 82.1
coord: 262..472
e-value: 1.3E-31
score: 112.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 94..445
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 1..496
NoneNo IPR availablePANTHERPTHR47928:SF97OS03G0635000 PROTEINcoord: 1..496

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg04667-RACarg04667-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding