Carg04662 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg04662
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Haloacid dehalogenase superfamily protein isoform 1
Location	Carg_Chr11: 12928757 .. 12932355 (-)
RNA-Seq Expression	Carg04662
Synteny	Carg04662

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCATTTCTGTGGTTTCTCTGCCCAGTTGCTCTTGTCCTCGTTCGATTCCATTCCACCAACCTCGTCTCTCCCCAAACCATAAATCTTTTTCTCCCATTTCCCTTCTAACCAATTGTTCTCGATTCAATGATTTGTGCCTTCCCTCTTTTACACCAACTCCAGCAACCGGTTGCACCAAAAACCACAGCCCCCACGACGCCGAGCCCGACCCGATTCGAAACCACAGGCTTTTTCAGCAATTCTACTTGTCAGTCAACTCTGAGAACGCCGCGGACGAAGACCCAGCTACTAATAATCAGAAACAAGATCCGGGTCAAGAGGATCAGAAAAAGGGCGCCAAAAACGCCGAGGGACTTTTGACAAACATGTGGTGGGCGAACCTGAAATCTGCAGTTGGTCAGAGATTAAACATCGAAGGCATTGTTTCTTCTGCAGCTGTTATTACTAAGGACCGGCATTTGGCGCTACCTCATGTTGTTGTGCCTGATGTGAGCTACATTGATTGGGCTGAACTGCAAAGAAGGGGTTTCAAGGGCGTTGTATTTGATAAGGACAATACAATTACCGCGCCTTACTCTTTGACAATTTGGGCTCCTCTCAAATCCTCACTTGAACAGTGTAAATCTGTCTTTGGCCATAATGTAGCGGTGCTCAGCAACTCTGCTGGTAATATGGGTTAAATTCGTTAGCAATGTGCTTGCTTCAATAGCCTTAATGGTTTGTTTTTGGCCTCAATGTGAATATTTACCCTCATGTTATCTGATGCGCTAGGGCTTTCTGAGTATGATCATGATGGTTCAAAAGCTAAAGCGATCGAGGGGTCGATTGGAATTAAAGTTATAAGGCATAGTGAGTGTAAATTTTCCATATTTAATTCTATTTTTGTAACATTTGTTTACGCAGGCTGAATTTTGTTGCTGAACATTAGGCTTTAGATATTGTATCCCCGTGCTATAACATTTTAGTGGGTGGACGTCTTATTGCTAACCACCACCTCTTAGTGCATAAAAGTAGAGAATTTGGACTTTGAGATTTCTTCATTCCATTTTATGGATGAAGTGTCGTGTAAAAAATCATTGATTTCTACATGATGAACTAATGTTAGGCTCAATGCTTATAATGGAACACACCGTAAATTTAGGCTGATTAATTACTTTTAGTGCGTATGTAAGGTTATTTCTGCATTGCACATATGAGACACTGCTAAGTATTTTGACGTAGGGGTGAAGAAGCCTGCTGGTACAGCTGAAGAAATCGAGAAACACTTTGGTTTTACTTCTTCCCAACTTGTTATGGTAAGAATCAGGTGAACTGCTTGAATGCTTTGGTTTTTCGGGTAAGCTATTATTTAGAAGTTGAAATCCATCTTTTCTCAGGTAGGTGATCGACCATTCACAGATGTGGTTTTTGGGAACCGTAATGGTCTTTTGACTATTTTAACTGAACCCTTGAGCATTGCTGGGGAGACGTTTGTCGTTAGGCAGGTTGGTTTCTCCTTCTACATATATATATATATATATATATATATATATATATATACCATTTTGTTCTCTTCTCTTGCAATTTATTGAGGGAATTAATGAGTTGAAAATCTAGGGTATAAGAAGATGCAAATATTGTTAATCTTTTTAAAACTTTTATTAAGTTTCCTTCACTATTACTATTATTTTCATTGATTTGTCACCGACTCGCCCAAATGTTGCTTCAAGGTCATAAGCCCCATGGAAAGGGCTGTGGAAATCTCGTCCCAAATGTACCTACCTGTCTAGTTAGAGTGTTCATGGCTTGGGTTGAGTCGAGTCAGTTCATGGTTGTTTTGTAGACCAACCTCAAAATTTGAGTTGGTCTGTTAACCTACACAAATAAACTGAATGCAACATCCAGAACAACCCAATTTTGCGGTTGTGTTGGGTTGGGTCATCTGGCGTGAGAATGATGTGGGACATTTGTTAACAATTTATGCTATTATTTTAATTTTCAATTTTGTTGTTTTTGAGCCTTTGTAATTAGTAAGCCTAAAGTGTGTAGAAACCTAGCATCAGTGATTCTGGTGACAGAACGACGAACCTGTTTATTTGGAATTTTGTTGAGAACACCTTTTGGAAGGAGATAGTTCAAGCAGTGCTGGCTTTACTGCAATTTGATTTCCTCTTCAAGATGAGTCACCCGCGTCAGAAAGATAGATAAGAAACATTGCATTGAGAGAGATTAGACATCAGACAGATAAGAAACATTATGTTGAGAGAAATCAGATGGCAAGAAGATGCATCAAAGATGATTGAATAGAGATCTCGAGTGGAGAGAGATACCAACAAAGAGCAAGATCCAGAGCAAAGAGAGAGATAGGAACAATCGGTGAGATATGTAGTGGAGAGAGATATTGAGGCAGAAGGGGGGCTGTAGAGTGGAGGAGATAGATCTACCGATGTGAATAATGTTACTGAACACATTGTTTGGAGGTTCTTTGTGTAGCTAAACAAAAATGAATTGGAAAAAGGACACAAATCAGAATGAAAATTCACCTATCTCATCCCAGCCCTTACAGTTTGCTTAGAGTTGTTCAAGTTTGGTGTGTTGCCGGTTTACTTGGTCTAACCTTTCAGCCTACCACTGATGGTTTTTGATAACGTAGAATAATAGACATCCAAATATGACCACCATCATTGGTCCTTCTACTTCATCAGTATGCATTCATATTACTACGTGACCACTAGAGATGCCGATCCATTGTTCACTCTATTCTGTGATTTTTTCTGTTCGCAGGTAAGGAAATTAGAAACATTCCTCTTGAACCGTTGGCTTAAGCAAGGAGTAAGACCTATCAATCATCGCCTATTACCATTACCAGACACTAAACAGTGCATTAAAGATTTGTAACCTCTTTAGTATGAATGAAAAATTTTGCCCTGTAGATATCCATGAACTGCTGAAAGATGGCATTCTTTTTGTCCTCTGGCCATTCATTAGCTTATGGTATTAGCGCCTGAGTTGAATATAATACATTGGTAGACTTTGTACTTTTGGACAGCAACAATATTGAAATGTAGAAGGGTTTCCTATCATCTCATCTTGATTTCTGCTCTTGAAAAGAATCATAATTATGTAAATTATATGATCTGATATTTAGAGGTTTTACATTCAGGATGAGCTGTCTATCTTAATTTTTTTTTTGCCGACCACTCGATGGATTGGTCAAATGGGTTTGATCTGGTTTGTTCGGTTCGCCCTTCTAGGGTTCGATCAGGTTTAACTTCGTAACTCTTTGAACCACACCTTAGCTTATGATATCCCTATTTTCATGAATGATTTGTCCCAAGTGAGAGGGAAAACTCGAGAATGACCTAATATCACAACCACATGAGAGAAAAGGCCTATGAAATATAAGATAAAGAGACCTACTATGCTCTCGTGATCGTATTACCAACTAATTAGTCAATCATCTATTACCAACTAATTAGTGATGGTAATCTGATATTTCCTATAATCAATAAGAAAGCATGGTCACTCAAGGTGCACTTACTATTACCACACTACAAGACTGAGGGTCACTCAAAGTGCACTTAAACATTGTCGATCGCCACTTGCTTAACAGATGGGT

mRNA sequence

TCCATTTCTGTGGTTTCTCTGCCCAGTTGCTCTTGTCCTCGTTCGATTCCATTCCACCAACCTCGTCTCTCCCCAAACCATAAATCTTTTTCTCCCATTTCCCTTCTAACCAATTGTTCTCGATTCAATGATTTGTGCCTTCCCTCTTTTACACCAACTCCAGCAACCGGTTGCACCAAAAACCACAGCCCCCACGACGCCGAGCCCGACCCGATTCGAAACCACAGGCTTTTTCAGCAATTCTACTTGTCAGTCAACTCTGAGAACGCCGCGGACGAAGACCCAGCTACTAATAATCAGAAACAAGATCCGGGTCAAGAGGATCAGAAAAAGGGCGCCAAAAACGCCGAGGGACTTTTGACAAACATGTGGTGGGCGAACCTGAAATCTGCAGTTGGTCAGAGATTAAACATCGAAGGCATTGTTTCTTCTGCAGCTGTTATTACTAAGGACCGGCATTTGGCGCTACCTCATGTTGTTGTGCCTGATGTGAGCTACATTGATTGGGCTGAACTGCAAAGAAGGGGTTTCAAGGGCGTTGTATTTGATAAGGACAATACAATTACCGCGCCTTACTCTTTGACAATTTGGGCTCCTCTCAAATCCTCACTTGAACAGTGTAAATCTGTCTTTGGCCATAATGTAGCGGTGCTCAGCAACTCTGCTGGTAATATGGGTTAAATTCGTTAGCAATGTGCTTGCTTCAATAGCCTTAATGTGAATATTTACCCTCATGTTATCTGATGCGCTAGGGCTTTCTGAGTATGATCATGATGGTTCAAAAGCTAAAGCGATCGAGGGGTCGATTGGAATTAAAGTTATAAGGCATAGGGTGAAGAAGCCTGCTGGTACAGCTGAAGAAATCGAGAAACACTTTGGTTTTACTTCTTCCCAACTTGTTATGGTAGGTGATCGACCATTCACAGATGTGGTTTTTGGGAACCGTAATGGTCTTTTGACTATTTTAACTGAACCCTTGAGCATTGCTGGGGAGACGTTTGTCGTTAGGCAGGTAAGGAAATTAGAAACATTCCTCTTGAACCGTTGGCTTAAGCAAGGAGTAAGACCTATCAATCATCGCCTATTACCATTACCAGACACTAAACAGTGCATTAAAGATTTGTAACCTCTTTAGTATGAATGAAAAATTTTGCCCTGTAGATATCCATGAACTGCTGAAAGATGGCATTCTTTTTGTCCTCTGGCCATTCATTAGCTTATGGTATTAGCGCCTGAGTTGAATATAATACATTGGTAGACTTTGTACTTTTGGACAGCAACAATATTGAAATGTAGAAGGGTTTCCTATCATCTCATCTTGATTTCTGCTCTTGAAAAGAATCATAATTATGTAAATTATATGATCTGATATTTAGAGGTTTTACATTCAGGATGAGCTGTCTATCTTAATTTTTTTTTTGCCGACCACTCGATGGATTGGTCAAATGGGTTTGATCTGGTTTGTTCGGTTCGCCCTTCTAGGGTTCGATCAGGTTTAACTTCGTAACTCTTTGAACCACACCTTAGCTTATGATATCCCTATTTTCATGAATGATTTGTCCCAAGTGAGAGGGAAAACTCGAGAATGACCTAATATCACAACCACATGAGAGAAAAGGCCTATGAAATATAAGATAAAGAGACCTACTATGCTCTCGTGATCGTATTACCAACTAATTAGTCAATCATCTATTACCAACTAATTAGTGATGGTAATCTGATATTTCCTATAATCAATAAGAAAGCATGGTCACTCAAGGTGCACTTACTATTACCACACTACAAGACTGAGGGTCACTCAAAGTGCACTTAAACATTGTCGATCGCCACTTGCTTAACAGATGGGT

Coding sequence (CDS)

TCCATTTCTGTGGTTTCTCTGCCCAGTTGCTCTTGTCCTCGTTCGATTCCATTCCACCAACCTCGTCTCTCCCCAAACCATAAATCTTTTTCTCCCATTTCCCTTCTAACCAATTGTTCTCGATTCAATGATTTGTGCCTTCCCTCTTTTACACCAACTCCAGCAACCGGTTGCACCAAAAACCACAGCCCCCACGACGCCGAGCCCGACCCGATTCGAAACCACAGGCTTTTTCAGCAATTCTACTTGTCAGTCAACTCTGAGAACGCCGCGGACGAAGACCCAGCTACTAATAATCAGAAACAAGATCCGGGTCAAGAGGATCAGAAAAAGGGCGCCAAAAACGCCGAGGGACTTTTGACAAACATGTGGTGGGCGAACCTGAAATCTGCAGTTGGTCAGAGATTAAACATCGAAGGCATTGTTTCTTCTGCAGCTGTTATTACTAAGGACCGGCATTTGGCGCTACCTCATGTTGTTGTGCCTGATGTGAGCTACATTGATTGGGCTGAACTGCAAAGAAGGGGTTTCAAGGGCGTTGTATTTGATAAGGACAATACAATTACCGCGCCTTACTCTTTGACAATTTGGGCTCCTCTCAAATCCTCACTTGAACAGTGTAAATCTGTCTTTGGCCATAATGTAGCGGTGCTCAGCAACTCTGCTGGTAATATGGGTTAA

Protein sequence

SISVVSLPSCSCPRSIPFHQPRLSPNHKSFSPISLLTNCSRFNDLCLPSFTPTPATGCTKNHSPHDAEPDPIRNHRLFQQFYLSVNSENAADEDPATNNQKQDPGQEDQKKGAKNAEGLLTNMWWANLKSAVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGVVFDKDNTITAPYSLTIWAPLKSSLEQCKSVFGHNVAVLSNSAGNMG

Homology

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BLAST of Carg04662 vs. NCBI nr
Match: KAG7022992.1 (hypothetical protein SDJN02_16728, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 464.9 bits (1195), Expect = 3.9e-127
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   SISVVSLPSCSCPRSIPFHQPRLSPNHKSFSPISLLTNCSRFNDLCLPSFTPTPATGCTK 60
           SISVVSLPSCSCPRSIPFHQPRLSPNHKSFSPISLLTNCSRFNDLCLPSFTPTPATGCTK
Sbjct: 1   SISVVSLPSCSCPRSIPFHQPRLSPNHKSFSPISLLTNCSRFNDLCLPSFTPTPATGCTK 60

Query: 61  NHSPHDAEPDPIRNHRLFQQFYLSVNSENAADEDPATNNQKQDPGQEDQKKGAKNAEGLL 120
           NHSPHDAEPDPIRNHRLFQQFYLSVNSENAADEDPATNNQKQDPGQEDQKKGAKNAEGLL
Sbjct: 61  NHSPHDAEPDPIRNHRLFQQFYLSVNSENAADEDPATNNQKQDPGQEDQKKGAKNAEGLL 120

Query: 121 TNMWWANLKSAVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV 180
           TNMWWANLKSAVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV
Sbjct: 121 TNMWWANLKSAVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV 180

Query: 181 VFDKDNTITAPYSLTIWAPLKSSLEQCKSVFGHNVAVLSNSAGNMG 227
           VFDKDNTITAPYSLTIWAPLKSSLEQCKSVFGHNVAVLSNSAGNMG
Sbjct: 181 VFDKDNTITAPYSLTIWAPLKSSLEQCKSVFGHNVAVLSNSAGNMG 226

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BLAST of Carg04662 vs. NCBI nr
Match: XP_022930683.1 (uncharacterized protein LOC111437079 isoform X2 [Cucurbita moschata])

HSP 1 Score: 445.3 bits (1144), Expect = 3.2e-121
Identity = 216/223 (96.86%), Postives = 220/223 (98.65%), Query Frame = 0


Query: 1   SISVVSLPSCSCPRSIPFHQPRLSPNHKSFSPISLLTNCSRFNDLCLPSFTPTPATGCTK 60
           SISVVSLPSCSCPRSIPFHQPRLS NHKSFSPISL+TNCSRFNDLC+PSFTPTPATGCTK
Sbjct: 5   SISVVSLPSCSCPRSIPFHQPRLSTNHKSFSPISLVTNCSRFNDLCVPSFTPTPATGCTK 64

Query: 61  NHSPHDAEPDPIRNHRLFQQFYLSVNSENAADEDPATNNQKQDPGQEDQKKGAKNAEGLL 120
           NHSPHDAEPDPIRNHRLFQQFY SVNSENAADEDPATNNQKQDPGQEDQKKGAKNA+GLL
Sbjct: 65  NHSPHDAEPDPIRNHRLFQQFYSSVNSENAADEDPATNNQKQDPGQEDQKKGAKNAKGLL 124

Query: 121 TNMWWANLKSAVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV 180
           TNMWWANLK+AVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV
Sbjct: 125 TNMWWANLKAAVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV 184

Query: 181 VFDKDNTITAPYSLTIWAPLKSSLEQCKSVFGHNVAVLSNSAG 224
           VFDKDNTITAPYS TIWAPLKSSLEQCKSVFGHNVAVLSNSAG
Sbjct: 185 VFDKDNTITAPYSETIWAPLKSSLEQCKSVFGHNVAVLSNSAG 227

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BLAST of Carg04662 vs. NCBI nr
Match: XP_022930682.1 (uncharacterized protein LOC111437079 isoform X1 [Cucurbita moschata])

HSP 1 Score: 445.3 bits (1144), Expect = 3.2e-121
Identity = 216/223 (96.86%), Postives = 220/223 (98.65%), Query Frame = 0


Query: 1   SISVVSLPSCSCPRSIPFHQPRLSPNHKSFSPISLLTNCSRFNDLCLPSFTPTPATGCTK 60
           SISVVSLPSCSCPRSIPFHQPRLS NHKSFSPISL+TNCSRFNDLC+PSFTPTPATGCTK
Sbjct: 5   SISVVSLPSCSCPRSIPFHQPRLSTNHKSFSPISLVTNCSRFNDLCVPSFTPTPATGCTK 64

Query: 61  NHSPHDAEPDPIRNHRLFQQFYLSVNSENAADEDPATNNQKQDPGQEDQKKGAKNAEGLL 120
           NHSPHDAEPDPIRNHRLFQQFY SVNSENAADEDPATNNQKQDPGQEDQKKGAKNA+GLL
Sbjct: 65  NHSPHDAEPDPIRNHRLFQQFYSSVNSENAADEDPATNNQKQDPGQEDQKKGAKNAKGLL 124

Query: 121 TNMWWANLKSAVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV 180
           TNMWWANLK+AVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV
Sbjct: 125 TNMWWANLKAAVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV 184

Query: 181 VFDKDNTITAPYSLTIWAPLKSSLEQCKSVFGHNVAVLSNSAG 224
           VFDKDNTITAPYS TIWAPLKSSLEQCKSVFGHNVAVLSNSAG
Sbjct: 185 VFDKDNTITAPYSETIWAPLKSSLEQCKSVFGHNVAVLSNSAG 227

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BLAST of Carg04662 vs. NCBI nr
Match: XP_023529294.1 (uncharacterized protein LOC111792185 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 440.7 bits (1132), Expect = 7.9e-120
Identity = 215/223 (96.41%), Postives = 218/223 (97.76%), Query Frame = 0


Query: 1   SISVVSLPSCSCPRSIPFHQPRLSPNHKSFSPISLLTNCSRFNDLCLPSFTPTPATGCTK 60
           SISVVSLPSCSCPRSIPFHQPRLS NHKSFSPISL+TNCSRFNDLC+PSFTPTPATGCTK
Sbjct: 5   SISVVSLPSCSCPRSIPFHQPRLSTNHKSFSPISLVTNCSRFNDLCVPSFTPTPATGCTK 64

Query: 61  NHSPHDAEPDPIRNHRLFQQFYLSVNSENAADEDPATNNQKQDPGQEDQKKGAKNAEGLL 120
           N SPHDAEPDPIRN RL QQFYLSVNSENAADEDPATNNQKQDPGQEDQKKGAKNA+GLL
Sbjct: 65  NRSPHDAEPDPIRNQRLLQQFYLSVNSENAADEDPATNNQKQDPGQEDQKKGAKNAKGLL 124

Query: 121 TNMWWANLKSAVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV 180
           TNMWWANLKSAVGQRLNIEGIV SAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV
Sbjct: 125 TNMWWANLKSAVGQRLNIEGIVFSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV 184

Query: 181 VFDKDNTITAPYSLTIWAPLKSSLEQCKSVFGHNVAVLSNSAG 224
           VFDKDNTITAPYSLTIWAPLKSSLEQCKSVFGHNVAVLSNSAG
Sbjct: 185 VFDKDNTITAPYSLTIWAPLKSSLEQCKSVFGHNVAVLSNSAG 227

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BLAST of Carg04662 vs. NCBI nr
Match: XP_022989193.1 (uncharacterized protein LOC111486339 [Cucurbita maxima])

HSP 1 Score: 438.3 bits (1126), Expect = 3.9e-119
Identity = 214/223 (95.96%), Postives = 217/223 (97.31%), Query Frame = 0


Query: 1   SISVVSLPSCSCPRSIPFHQPRLSPNHKSFSPISLLTNCSRFNDLCLPSFTPTPATGCTK 60
           SISVVSLPSCSCPRSIPFHQPRLS NHKSFSP+SL+TNCSRFNDLC+PSFTPTPATGCTK
Sbjct: 121 SISVVSLPSCSCPRSIPFHQPRLSTNHKSFSPLSLVTNCSRFNDLCVPSFTPTPATGCTK 180

Query: 61  NHSPHDAEPDPIRNHRLFQQFYLSVNSENAADEDPATNNQKQDPGQEDQKKGAKNAEGLL 120
           NHSPHDAE DPIRN RLFQQFYLSVNSENAADEDPATNNQKQDPG E QKKGAKNA GLL
Sbjct: 181 NHSPHDAESDPIRNQRLFQQFYLSVNSENAADEDPATNNQKQDPGPEVQKKGAKNARGLL 240

Query: 121 TNMWWANLKSAVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV 180
           TNMWWANLKSAVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV
Sbjct: 241 TNMWWANLKSAVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV 300

Query: 181 VFDKDNTITAPYSLTIWAPLKSSLEQCKSVFGHNVAVLSNSAG 224
           VFDKDNTITAPYSLTIWAPLKSSLEQCKSVFGHNVAVLSNSAG
Sbjct: 301 VFDKDNTITAPYSLTIWAPLKSSLEQCKSVFGHNVAVLSNSAG 343

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BLAST of Carg04662 vs. ExPASy Swiss-Prot
Match: Q9LXR9 (Phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PGPP1 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.1e-39
Identity = 102/223 (45.74%), Postives = 137/223 (61.43%), Query Frame = 0


Query: 2   ISVVSLPSCSCPRSIPFHQPRLSPNHKSFSPI-SLLTNCSRFNDLCLPSFTPTPATGCTK 61
           IS  + P CS P           P+  S SP+ +  T+ S+  +L LP+F  +      +
Sbjct: 34  ISCSTKPICSPP----------PPSSSSSSPLQTTTTHRSQKQNLRLPTFEDSFL--LYQ 93

Query: 62  NHSPHDAEPDPIRNHRLFQQFYLSVNSENAADEDPATNNQKQDPGQEDQKKGAKNAEGLL 121
             SP +   DP  ++R+ +QF          D +P    +   P  ED  KG      + 
Sbjct: 94  FSSPTE---DPGFSNRIPEQF----------DGEP---RELVLPRVEDNNKGL----AIS 153

Query: 122 TNMWWANLKSAVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV 181
           +NMWWA+LK+A+GQR+NIEGIVSS +V+ KDR   LPHV V D+ YIDW  L+R+GFKGV
Sbjct: 154 SNMWWADLKAALGQRINIEGIVSSVSVVVKDRQFVLPHVSVKDLRYIDWEVLKRKGFKGV 213

Query: 182 VFDKDNTITAPYSLTIWAPLKSSLEQCKSVFGHNVAVLSNSAG 224
           VFDKDNT+TAPYSL IW PL+ S+E+CK+VFGH++AV SNSAG
Sbjct: 214 VFDKDNTLTAPYSLAIWPPLRPSIERCKAVFGHDIAVFSNSAG 224

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BLAST of Carg04662 vs. ExPASy Swiss-Prot
Match: A0A2K3DU55 (Phosphatidylglycerophosphate phosphatase 1, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=PGPP1 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.5e-15
Identity = 37/92 (40.22%), Postives = 56/92 (60.87%), Query Frame = 0


Query: 132 VGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGVVFDKDNTITAP 191
           V Q  N  G+    ++   ++ LALPH+  PD+ ++DW  L+  GFKG+VFDKDNT++ P
Sbjct: 52  VQQNFNSAGVGLFFSLFGGNQSLALPHLAAPDIRHVDWRALKAAGFKGLVFDKDNTLSLP 111

Query: 192 YSLTIWAPLKSSLEQCKSVFGHNVAVLSNSAG 224
           ++L +   L+ +L  C   FG    + SNSAG
Sbjct: 112 FALEVEPRLQPALAGCLEAFGGRAVLYSNSAG 143

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BLAST of Carg04662 vs. ExPASy TrEMBL
Match: A0A6J1EW16 (uncharacterized protein LOC111437079 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437079 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.5e-121
Identity = 216/223 (96.86%), Postives = 220/223 (98.65%), Query Frame = 0


Query: 1   SISVVSLPSCSCPRSIPFHQPRLSPNHKSFSPISLLTNCSRFNDLCLPSFTPTPATGCTK 60
           SISVVSLPSCSCPRSIPFHQPRLS NHKSFSPISL+TNCSRFNDLC+PSFTPTPATGCTK
Sbjct: 5   SISVVSLPSCSCPRSIPFHQPRLSTNHKSFSPISLVTNCSRFNDLCVPSFTPTPATGCTK 64

Query: 61  NHSPHDAEPDPIRNHRLFQQFYLSVNSENAADEDPATNNQKQDPGQEDQKKGAKNAEGLL 120
           NHSPHDAEPDPIRNHRLFQQFY SVNSENAADEDPATNNQKQDPGQEDQKKGAKNA+GLL
Sbjct: 65  NHSPHDAEPDPIRNHRLFQQFYSSVNSENAADEDPATNNQKQDPGQEDQKKGAKNAKGLL 124

Query: 121 TNMWWANLKSAVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV 180
           TNMWWANLK+AVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV
Sbjct: 125 TNMWWANLKAAVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV 184

Query: 181 VFDKDNTITAPYSLTIWAPLKSSLEQCKSVFGHNVAVLSNSAG 224
           VFDKDNTITAPYS TIWAPLKSSLEQCKSVFGHNVAVLSNSAG
Sbjct: 185 VFDKDNTITAPYSETIWAPLKSSLEQCKSVFGHNVAVLSNSAG 227

[Close]

BLAST of Carg04662 vs. ExPASy TrEMBL
Match: A0A6J1ER97 (uncharacterized protein LOC111437079 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437079 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.5e-121
Identity = 216/223 (96.86%), Postives = 220/223 (98.65%), Query Frame = 0


Query: 1   SISVVSLPSCSCPRSIPFHQPRLSPNHKSFSPISLLTNCSRFNDLCLPSFTPTPATGCTK 60
           SISVVSLPSCSCPRSIPFHQPRLS NHKSFSPISL+TNCSRFNDLC+PSFTPTPATGCTK
Sbjct: 5   SISVVSLPSCSCPRSIPFHQPRLSTNHKSFSPISLVTNCSRFNDLCVPSFTPTPATGCTK 64

Query: 61  NHSPHDAEPDPIRNHRLFQQFYLSVNSENAADEDPATNNQKQDPGQEDQKKGAKNAEGLL 120
           NHSPHDAEPDPIRNHRLFQQFY SVNSENAADEDPATNNQKQDPGQEDQKKGAKNA+GLL
Sbjct: 65  NHSPHDAEPDPIRNHRLFQQFYSSVNSENAADEDPATNNQKQDPGQEDQKKGAKNAKGLL 124

Query: 121 TNMWWANLKSAVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV 180
           TNMWWANLK+AVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV
Sbjct: 125 TNMWWANLKAAVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV 184

Query: 181 VFDKDNTITAPYSLTIWAPLKSSLEQCKSVFGHNVAVLSNSAG 224
           VFDKDNTITAPYS TIWAPLKSSLEQCKSVFGHNVAVLSNSAG
Sbjct: 185 VFDKDNTITAPYSETIWAPLKSSLEQCKSVFGHNVAVLSNSAG 227

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BLAST of Carg04662 vs. ExPASy TrEMBL
Match: A0A6J1JPJ9 (uncharacterized protein LOC111486339 OS=Cucurbita maxima OX=3661 GN=LOC111486339 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 1.9e-119
Identity = 214/223 (95.96%), Postives = 217/223 (97.31%), Query Frame = 0


Query: 1   SISVVSLPSCSCPRSIPFHQPRLSPNHKSFSPISLLTNCSRFNDLCLPSFTPTPATGCTK 60
           SISVVSLPSCSCPRSIPFHQPRLS NHKSFSP+SL+TNCSRFNDLC+PSFTPTPATGCTK
Sbjct: 121 SISVVSLPSCSCPRSIPFHQPRLSTNHKSFSPLSLVTNCSRFNDLCVPSFTPTPATGCTK 180

Query: 61  NHSPHDAEPDPIRNHRLFQQFYLSVNSENAADEDPATNNQKQDPGQEDQKKGAKNAEGLL 120
           NHSPHDAE DPIRN RLFQQFYLSVNSENAADEDPATNNQKQDPG E QKKGAKNA GLL
Sbjct: 181 NHSPHDAESDPIRNQRLFQQFYLSVNSENAADEDPATNNQKQDPGPEVQKKGAKNARGLL 240

Query: 121 TNMWWANLKSAVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV 180
           TNMWWANLKSAVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV
Sbjct: 241 TNMWWANLKSAVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV 300

Query: 181 VFDKDNTITAPYSLTIWAPLKSSLEQCKSVFGHNVAVLSNSAG 224
           VFDKDNTITAPYSLTIWAPLKSSLEQCKSVFGHNVAVLSNSAG
Sbjct: 301 VFDKDNTITAPYSLTIWAPLKSSLEQCKSVFGHNVAVLSNSAG 343

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BLAST of Carg04662 vs. ExPASy TrEMBL
Match: A0A5A7V5B2 (Haloacid dehalogenase superfamily protein isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G00210 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.2e-97
Identity = 175/223 (78.48%), Postives = 192/223 (86.10%), Query Frame = 0


Query: 1   SISVVSLPSCSCPRSIPFHQPRLSPNHKSFSPISLLTNCSRFNDLCLPSFTPTPATGCTK 60
           S+  VSLPSCS  RSIPFHQ   S  HKSFSPISL+TNCS+FNDLC+ SFTPTPAT C+K
Sbjct: 5   SVCAVSLPSCSSSRSIPFHQTLFSRKHKSFSPISLITNCSQFNDLCVHSFTPTPATSCSK 64

Query: 61  NHSPHDAEPDPIRNHRLFQQFYLSVNSENAADEDPATNNQKQDPGQEDQKKGAKNAEGLL 120
           NH+ +DAEPDP RN RLFQQFYLS+NS N  D++ +T  Q +D GQEDQ +G K ++GL 
Sbjct: 65  NHNSNDAEPDPSRNQRLFQQFYLSINSNNVPDQNSSTKKQNEDLGQEDQNRGVKKSKGLF 124

Query: 121 TNMWWANLKSAVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV 180
           TNMWW NLKSA+GQRLNIEGIVSSAAVITKDRHLALPHVVVPDV YIDW ELQRRGFKGV
Sbjct: 125 TNMWWVNLKSAIGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVRYIDWVELQRRGFKGV 184

Query: 181 VFDKDNTITAPYSLTIWAPLKSSLEQCKSVFGHNVAVLSNSAG 224
           VFDKDNTITAPYSLTIWAP KSSLEQCK+VFGHNVAV SNSAG
Sbjct: 185 VFDKDNTITAPYSLTIWAPFKSSLEQCKTVFGHNVAVFSNSAG 227

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BLAST of Carg04662 vs. ExPASy TrEMBL
Match: A0A1S3BN52 (uncharacterized protein LOC103491381 OS=Cucumis melo OX=3656 GN=LOC103491381 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.2e-97
Identity = 175/223 (78.48%), Postives = 192/223 (86.10%), Query Frame = 0


Query: 1   SISVVSLPSCSCPRSIPFHQPRLSPNHKSFSPISLLTNCSRFNDLCLPSFTPTPATGCTK 60
           S+  VSLPSCS  RSIPFHQ   S  HKSFSPISL+TNCS+FNDLC+ SFTPTPAT C+K
Sbjct: 5   SVCAVSLPSCSSSRSIPFHQTLFSRKHKSFSPISLITNCSQFNDLCVHSFTPTPATSCSK 64

Query: 61  NHSPHDAEPDPIRNHRLFQQFYLSVNSENAADEDPATNNQKQDPGQEDQKKGAKNAEGLL 120
           NH+ +DAEPDP RN RLFQQFYLS+NS N  D++ +T  Q +D GQEDQ +G K ++GL 
Sbjct: 65  NHNSNDAEPDPSRNQRLFQQFYLSINSNNVPDQNSSTKKQNEDLGQEDQNRGVKKSKGLF 124

Query: 121 TNMWWANLKSAVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV 180
           TNMWW NLKSA+GQRLNIEGIVSSAAVITKDRHLALPHVVVPDV YIDW ELQRRGFKGV
Sbjct: 125 TNMWWVNLKSAIGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVRYIDWVELQRRGFKGV 184

Query: 181 VFDKDNTITAPYSLTIWAPLKSSLEQCKSVFGHNVAVLSNSAG 224
           VFDKDNTITAPYSLTIWAP KSSLEQCK+VFGHNVAV SNSAG
Sbjct: 185 VFDKDNTITAPYSLTIWAPFKSSLEQCKTVFGHNVAVFSNSAG 227

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BLAST of Carg04662 vs. TAIR 10
Match: AT3G58830.1 (haloacid dehalogenase (HAD) superfamily protein )

HSP 1 Score: 164.9 bits (416), Expect = 7.8e-41
Identity = 102/223 (45.74%), Postives = 137/223 (61.43%), Query Frame = 0


Query: 2   ISVVSLPSCSCPRSIPFHQPRLSPNHKSFSPI-SLLTNCSRFNDLCLPSFTPTPATGCTK 61
           IS  + P CS P           P+  S SP+ +  T+ S+  +L LP+F  +      +
Sbjct: 29  ISCSTKPICSPP----------PPSSSSSSPLQTTTTHRSQKQNLRLPTFEDSFL--LYQ 88

Query: 62  NHSPHDAEPDPIRNHRLFQQFYLSVNSENAADEDPATNNQKQDPGQEDQKKGAKNAEGLL 121
             SP +   DP  ++R+ +QF          D +P    +   P  ED  KG      + 
Sbjct: 89  FSSPTE---DPGFSNRIPEQF----------DGEP---RELVLPRVEDNNKGL----AIS 148

Query: 122 TNMWWANLKSAVGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGV 181
           +NMWWA+LK+A+GQR+NIEGIVSS +V+ KDR   LPHV V D+ YIDW  L+R+GFKGV
Sbjct: 149 SNMWWADLKAALGQRINIEGIVSSVSVVVKDRQFVLPHVSVKDLRYIDWEVLKRKGFKGV 208

Query: 182 VFDKDNTITAPYSLTIWAPLKSSLEQCKSVFGHNVAVLSNSAG 224
           VFDKDNT+TAPYSL IW PL+ S+E+CK+VFGH++AV SNSAG
Sbjct: 209 VFDKDNTLTAPYSLAIWPPLRPSIERCKAVFGHDIAVFSNSAG 219

The following BLAST results are available for this feature:

BLAST of Carg04662 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022992.1	3.9e-127	100.00	hypothetical protein SDJN02_16728, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022930683.1	3.2e-121	96.86	uncharacterized protein LOC111437079 isoform X2 [Cucurbita moschata]	[more]
XP_022930682.1	3.2e-121	96.86	uncharacterized protein LOC111437079 isoform X1 [Cucurbita moschata]	[more]
XP_023529294.1	7.9e-120	96.41	uncharacterized protein LOC111792185 [Cucurbita pepo subsp. pepo]	[more]
XP_022989193.1	3.9e-119	95.96	uncharacterized protein LOC111486339 [Cucurbita maxima]	[more]

BLAST of Carg04662 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXR9	1.1e-39	45.74	Phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial OS=Arabi...	[more]
A0A2K3DU55	5.5e-15	40.22	Phosphatidylglycerophosphate phosphatase 1, chloroplastic OS=Chlamydomonas reinh...	[more]

BLAST of Carg04662 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EW16	1.5e-121	96.86	uncharacterized protein LOC111437079 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1ER97	1.5e-121	96.86	uncharacterized protein LOC111437079 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JPJ9	1.9e-119	95.96	uncharacterized protein LOC111486339 OS=Cucurbita maxima OX=3661 GN=LOC111486339...	[more]
A0A5A7V5B2	1.2e-97	78.48	Haloacid dehalogenase superfamily protein isoform 1 OS=Cucumis melo var. makuwa ...	[more]
A0A1S3BN52	1.2e-97	78.48	uncharacterized protein LOC103491381 OS=Cucumis melo OX=3656 GN=LOC103491381 PE=...	[more]

BLAST of Carg04662 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58830.1	7.8e-41	45.74	haloacid dehalogenase (HAD) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027706	PGP phosphatase, mitochondrial/chloroplastic	PFAM	PF09419	PGP_phosphatase	coord: 139..224 e-value: 1.6E-20 score: 73.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..113
None	No IPR available	PANTHER	PTHR19288	4-NITROPHENYLPHOSPHATASE-RELATED	coord: 90..223
None	No IPR available	PANTHER	PTHR19288:SF78	SUBFAMILY NOT NAMED	coord: 90..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04662-RA	Carg04662-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016311	dephosphorylation
molecular_function	GO:0008962	phosphatidylglycerophosphatase activity