Carg04587 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg04587
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Pectate lyase
Location	Carg_Chr04: 19559525 .. 19562836 (+)
RNA-Seq Expression	Carg04587
Synteny	Carg04587

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGATTATACCCTTTTAGAATAATCTTTTCAAGGAAAGAGAATCTAAAGTGTTCTTTCGCCATTTCCCATTGTTCCCAAGTTGCTTTGTTAGCAGATTCATGTATAGTTTAGTTATTAAGCAGTGTTCTTGTTCTTGTTCATGTTCATTTGAAGAAGAAGGTACCTGAAATAGAGTTCTTCTTGTTCTTGTTCTTGTTCTTGTTCTGGTTCTTCATTTCAACAAAATCTACAAGCAGACAGACATGTTTGCTGCCATTGCCATTCTGTTGTTCAGCTGGTTTTTGAGCTCCTCTCTGCCTTCTATGGCAGCTTTCAGTTTCAATCTCACTGACCCACATCTTCTTCCAGATCCTGAAACTGTTGCTTATGAAGTTCAGAGGTAAACAAACAAGTTTCCACTGATTCAGGCTTTGTCCAGAACATGCCTCTAATGGGGTTCTGCAGTTGTTCTTGTTTAGGCATTTTAACAAACACCTTGTGTGCATTGTTGTTCTGCTCAAAGGTGTAGTCCCCTGCTTCAATGGCTTCCTTCCCACTAATTTGGTGATATCTATGTTTCTTGCAGGAGTGTGAATGATTCATTTTCAAGAAGGGAAATGCTGTCGATTCATTCTAAAGGTCAATCGAATTCCTGTCAAACTGGAAACCCTATCGATGATTGTTGGCGCTGCGGTTCGAACTGGCAAGACAATCGCCAACGGCTTGCAGATTGCAGCATTGGATTTGGCCGAAACGCCATGGGAGGTAAAGGAGGTCAGATCTACATAGTTACAGATTCCTCCGACTCCGACCCTGTAAACCCTCGCCCTGGAACTCTCCGCTACGCTGTGGTTCAAGATGAACCTCTCTGGATCGTCTTTGCTGCAGACATGACTATCAAACTCAAGTACGAACTCATGATGAACAGTTACAAAACCCTAGATGGCCGCGGCGCAAATGTCCACATAACCGGCGGCGGTTGCATCACACTTCAGTACATCTCGAATGTAATCATCCACAACATCAACATTCATCACTGTATCCCTACCGGTCACACTAACGTCCGATCAAGCCCTACGCACGTCGGATACAGAGGAAAGTCCGACGGCGATGGAATCTCAATCTTCAGCTCGCGCAACATCTGGATCGATCATTGCTCCTTATCGTACTGTACCGACGGCTTAATCGACGCCATAATGGGATCGACCGGAATCACGATCTCGAACAACTACTTCTCGCACCACGACGAGGTGATGCTGCTGGGGCATGAGGACGGCTATACGCCAGACTCGGGGATGCAGGTGACGATTGCGTTTAATTTGTTCGGCGAGAAGCTGGTTCAGCGGATGCCGCGGTGCCGGCGGGGTTATATACACGTGGTCAACAACGAGTTCCGATCGTGGGAGATGTACGCCATCGGCGGTAGCGGTGGTCCGACGATCAACAGCCAAGGGAATCGGTATATTGCGCCGGGGAATCCCAATGCGAAGGAGGTATGTTAACGTTATTACTCTTTTCTTCTCTCCACTCGTTGTACAGTCCACGGCGCGTATTCTGAACGCGCCGCTGAGGGAAATTATTTATAGGGAAGTTTTCGGGGCTTTAAGGTAATATCACTAATTCCATTTGGTTTTTAGTTTTTTTTCTAACTTTTTCAAAATTTTAATTTTAGCAATTTCTGATAACGTAGGGGCAAAACTGAAAATTTTAAAATATACAAGGACCAAATGTAAAATATGTAAAGTCAATGATTTGACGGGACAGTCCTCAGCCACTGGCTTCCTGTTTTGGACGACCTGTGTATAGTCAAAGAAGTGAAACGGTGTCGTTTTAATGCAGGTGACGAAGCGCGTGGACACAAACGCGGGGGATTGGTCGGAGTGGAACTGGAGGACGGAGGGGGACATTATGGTAAATGGCGCATTTTTTGTGCCGTCCGGCGAAGGACTGAGCAATATGTACGTTAAAGCTTCGAGTGTGGCGCCCAAATCCGCCGCTCTTGTCGACCAACTCACTCTCAACGCCGGCGTCTTCGGCGGGACCAGGTACTTTTTCTTTCTAAATGACCAAATTGCCCTTCATTTTTTCTTTTTCTTTTTTTTCTTTTTGATTAAAATTCATACTCTCTATTGTTGAAAATTTCAATTGGGTTGTGATAGTTGAGGCCTAGTTTTTCATTCGGTTTTTCGGAGTTTAGAGTTTCAATATGAAATGACCAAAATACCCTTATTTTTTTAACCTCAAGATTTGGGGAGTAAATGTTAAAAATGTGGTCCTTATAATTTTAAAATTTAGAATTTTATAATTGGATATATAACCTCATAAATAACTTATCTAGACCTTTATTATAAAAAAAAAACAAAAAAAAACAAAAAAAAAAACAAATAATTTTAACTAAATTACAAATTTATGGATAAATTGAATGGGTAAATGAGATATAGTATGTGGGACTTTGGAGTGAGAATCTAGGGCTGACACAACAGTCGAAAAACACAGCTCACTTGTTTTCTTGTTCTTGTCTTTTGTCTGTTCTGTCCACTTCTCCATTGGGCAAGCAAGCAATACCTTTTGCTTTTCCAAACACACCAAAATCTCCTTCAAGTAGGATTGAGAGAGATTGGGTTAAATTTTCTGGTTAAAATAATTGTTACCAATATGCTAGATTACAGTATAAACAAGTGTTTAGTAAATGTAGCGATCTCGATATATGATCGTTTATTAATTAATCGAGATACTTACAACGTTCAACTCTATTCGGTAATATGAGCTCGATTAGAAGGGTAAAGTTGTCCCCTGTGGATTAGAAAAGAAAGGAAAAAGTTAGCCTTTTAAGTTGTAAGCATAAATAAAGGGTAAAAGGGAAGAGGGTTATAGTGCATGTGTGGGGAAAAGAAGCATTAGCAGTTGGGGCAAGTGGGGGTTCTTCCATTCATACCATAATCTGGGGTTTGCCCATTTCTCTTTAAGAGTTGGCCAATTAGGCTTTATTCTATCTAACTCAAACTTCACCAACCAAATCATAGAGCTAGGAATTGAGTGATTATTTGATGTTCATCTTGATGGATACTCAAGCATTGTTCCATTTTGAATGATGTAGGGAGAGTAGACAGAGCAGCTCGTACCCTGGAGACGAGAGCTTTTCCAATTCCGGGTCCAGTGGCAGCGATGGCGGTGGTGACTACTTCGGGATGATATTCGGCGGGGGCGGTGTGAACAGTGCACTGCCACCATCTCTTTCAGTTGTTAACATGGTCGTTCTAACTCTGCTTACTATTTTAGTTCTGTACACAAACTCCATCTATGATGCTTTATTATCATTGACAGCATTGTAG

mRNA sequence

TGGATTATACCCTTTTAGAATAATCTTTTCAAGGAAAGAGAATCTAAAGTGTTCTTTCGCCATTTCCCATTGTTCCCAAGTTGCTTTGTTAGCAGATTCATGTATAGTTTAGTTATTAAGCAGTGTTCTTGTTCTTGTTCATGTTCATTTGAAGAAGAAGGTACCTGAAATAGAGTTCTTCTTGTTCTTGTTCTTGTTCTTGTTCTGGTTCTTCATTTCAACAAAATCTACAAGCAGACAGACATGTTTGCTGCCATTGCCATTCTGTTGTTCAGCTGGTTTTTGAGCTCCTCTCTGCCTTCTATGGCAGCTTTCAGTTTCAATCTCACTGACCCACATCTTCTTCCAGATCCTGAAACTGTTGCTTATGAAGTTCAGAGGAGTGTGAATGATTCATTTTCAAGAAGGGAAATGCTGTCGATTCATTCTAAAGGTCAATCGAATTCCTGTCAAACTGGAAACCCTATCGATGATTGTTGGCGCTGCGGTTCGAACTGGCAAGACAATCGCCAACGGCTTGCAGATTGCAGCATTGGATTTGGCCGAAACGCCATGGGAGGTAAAGGAGGTCAGATCTACATAGTTACAGATTCCTCCGACTCCGACCCTGTAAACCCTCGCCCTGGAACTCTCCGCTACGCTGTGGTTCAAGATGAACCTCTCTGGATCGTCTTTGCTGCAGACATGACTATCAAACTCAAGTACGAACTCATGATGAACAGTTACAAAACCCTAGATGGCCGCGGCGCAAATGTCCACATAACCGGCGGCGGTTGCATCACACTTCAGTACATCTCGAATGTAATCATCCACAACATCAACATTCATCACTGTATCCCTACCGGTCACACTAACGTCCGATCAAGCCCTACGCACGTCGGATACAGAGGAAAGTCCGACGGCGATGGAATCTCAATCTTCAGCTCGCGCAACATCTGGATCGATCATTGCTCCTTATCGTACTGTACCGACGGCTTAATCGACGCCATAATGGGATCGACCGGAATCACGATCTCGAACAACTACTTCTCGCACCACGACGAGGTGATGCTGCTGGGGCATGAGGACGGCTATACGCCAGACTCGGGGATGCAGGTGACGATTGCGTTTAATTTGTTCGGCGAGAAGCTGGTTCAGCGGATGCCGCGGTGCCGGCGGGGTTATATACACGTGGTCAACAACGAGTTCCGATCGTGGGAGATGTACGCCATCGGCGGTAGCGGTGGTCCGACGATCAACAGCCAAGGGAATCGGTATATTGCGCCGGGGAATCCCAATGCGAAGGAGGTGACGAAGCGCGTGGACACAAACGCGGGGGATTGGTCGGAGTGGAACTGGAGGACGGAGGGGGACATTATGGTAAATGGCGCATTTTTTGTGCCGTCCGGCGAAGGACTGAGCAATATGTACGTTAAAGCTTCGAGTGTGGCGCCCAAATCCGCCGCTCTTGTCGACCAACTCACTCTCAACGCCGGCGTCTTCGGCGGGACCAGGGAGAGTAGACAGAGCAGCTCGTACCCTGGAGACGAGAGCTTTTCCAATTCCGGGTCCAGTGGCAGCGATGGCGGTGGTGACTACTTCGGGATGATATTCGGCGGGGGCGGTGTGAACAGTGCACTGCCACCATCTCTTTCAGTTGTTAACATGGTCGTTCTAACTCTGCTTACTATTTTAGTTCTGTACACAAACTCCATCTATGATGCTTTATTATCATTGACAGCATTGTAG

Coding sequence (CDS)

ATGTTTGCTGCCATTGCCATTCTGTTGTTCAGCTGGTTTTTGAGCTCCTCTCTGCCTTCTATGGCAGCTTTCAGTTTCAATCTCACTGACCCACATCTTCTTCCAGATCCTGAAACTGTTGCTTATGAAGTTCAGAGGAGTGTGAATGATTCATTTTCAAGAAGGGAAATGCTGTCGATTCATTCTAAAGGTCAATCGAATTCCTGTCAAACTGGAAACCCTATCGATGATTGTTGGCGCTGCGGTTCGAACTGGCAAGACAATCGCCAACGGCTTGCAGATTGCAGCATTGGATTTGGCCGAAACGCCATGGGAGGTAAAGGAGGTCAGATCTACATAGTTACAGATTCCTCCGACTCCGACCCTGTAAACCCTCGCCCTGGAACTCTCCGCTACGCTGTGGTTCAAGATGAACCTCTCTGGATCGTCTTTGCTGCAGACATGACTATCAAACTCAAGTACGAACTCATGATGAACAGTTACAAAACCCTAGATGGCCGCGGCGCAAATGTCCACATAACCGGCGGCGGTTGCATCACACTTCAGTACATCTCGAATGTAATCATCCACAACATCAACATTCATCACTGTATCCCTACCGGTCACACTAACGTCCGATCAAGCCCTACGCACGTCGGATACAGAGGAAAGTCCGACGGCGATGGAATCTCAATCTTCAGCTCGCGCAACATCTGGATCGATCATTGCTCCTTATCGTACTGTACCGACGGCTTAATCGACGCCATAATGGGATCGACCGGAATCACGATCTCGAACAACTACTTCTCGCACCACGACGAGGTGATGCTGCTGGGGCATGAGGACGGCTATACGCCAGACTCGGGGATGCAGGTGACGATTGCGTTTAATTTGTTCGGCGAGAAGCTGGTTCAGCGGATGCCGCGGTGCCGGCGGGGTTATATACACGTGGTCAACAACGAGTTCCGATCGTGGGAGATGTACGCCATCGGCGGTAGCGGTGGTCCGACGATCAACAGCCAAGGGAATCGGTATATTGCGCCGGGGAATCCCAATGCGAAGGAGGTGACGAAGCGCGTGGACACAAACGCGGGGGATTGGTCGGAGTGGAACTGGAGGACGGAGGGGGACATTATGGTAAATGGCGCATTTTTTGTGCCGTCCGGCGAAGGACTGAGCAATATGTACGTTAAAGCTTCGAGTGTGGCGCCCAAATCCGCCGCTCTTGTCGACCAACTCACTCTCAACGCCGGCGTCTTCGGCGGGACCAGGGAGAGTAGACAGAGCAGCTCGTACCCTGGAGACGAGAGCTTTTCCAATTCCGGGTCCAGTGGCAGCGATGGCGGTGGTGACTACTTCGGGATGATATTCGGCGGGGGCGGTGTGAACAGTGCACTGCCACCATCTCTTTCAGTTGTTAACATGGTCGTTCTAACTCTGCTTACTATTTTAGTTCTGTACACAAACTCCATCTATGATGCTTTATTATCATTGACAGCATTGTAG

Protein sequence

MFAAIAILLFSWFLSSSLPSMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREMLSIHSKGQSNSCQTGNPIDDCWRCGSNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCITLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRMPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESRQSSSYPGDESFSNSGSSGSDGGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLYTNSIYDALLSLTAL

Homology

[Close]

BLAST of Carg04587 vs. NCBI nr
Match: XP_022957835.1 (probable pectate lyase 12 [Cucurbita moschata] >KAG7032968.1 putative pectate lyase 12 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 993.4 bits (2567), Expect = 6.9e-286
Identity = 494/494 (100.00%), Postives = 494/494 (100.00%), Query Frame = 0


Query: 1   MFAAIAILLFSWFLSSSLPSMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREMLSI 60
           MFAAIAILLFSWFLSSSLPSMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREMLSI
Sbjct: 1   MFAAIAILLFSWFLSSSLPSMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREMLSI 60

Query: 61  HSKGQSNSCQTGNPIDDCWRCGSNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDS 120
           HSKGQSNSCQTGNPIDDCWRCGSNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDS
Sbjct: 61  HSKGQSNSCQTGNPIDDCWRCGSNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDS 120

Query: 121 DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT 180
           DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT
Sbjct: 121 DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT 180

Query: 181 LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY 240
           LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY
Sbjct: 181 LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY 240

Query: 241 CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM 300
           CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM
Sbjct: 241 CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM 300

Query: 301 PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW 360
           PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW
Sbjct: 301 PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW 360

Query: 361 SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR 420
           SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR
Sbjct: 361 SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR 420

Query: 421 QSSSYPGDESFSNSGSSGSDGGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY 480
           QSSSYPGDESFSNSGSSGSDGGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY
Sbjct: 421 QSSSYPGDESFSNSGSSGSDGGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY 480

Query: 481 TNSIYDALLSLTAL 495
           TNSIYDALLSLTAL
Sbjct: 481 TNSIYDALLSLTAL 494

[Close]

BLAST of Carg04587 vs. NCBI nr
Match: XP_023524526.1 (probable pectate lyase 12 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 984.2 bits (2543), Expect = 4.2e-283
Identity = 489/494 (98.99%), Postives = 491/494 (99.39%), Query Frame = 0


Query: 1   MFAAIAILLFSWFLSSSLPSMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREMLSI 60
           MFAAIAILLF+WFLSSSLPS+AAFSFNLTDPHLLPDPETV YEVQRSVNDSFSRREMLSI
Sbjct: 1   MFAAIAILLFTWFLSSSLPSLAAFSFNLTDPHLLPDPETVVYEVQRSVNDSFSRREMLSI 60

Query: 61  HSKGQSNSCQTGNPIDDCWRCGSNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDS 120
           HSKGQSNSCQTGNPIDDCWRCGSNWQ NRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDS
Sbjct: 61  HSKGQSNSCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDS 120

Query: 121 DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT 180
           DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT
Sbjct: 121 DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT 180

Query: 181 LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY 240
           LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY
Sbjct: 181 LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY 240

Query: 241 CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM 300
           CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM
Sbjct: 241 CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM 300

Query: 301 PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW 360
           PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW
Sbjct: 301 PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW 360

Query: 361 SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR 420
           SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR
Sbjct: 361 SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR 420

Query: 421 QSSSYPGDESFSNSGSSGSDGGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY 480
           QSSSYPGDESFSNSGSSGSD GGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY
Sbjct: 421 QSSSYPGDESFSNSGSSGSDSGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY 480

Query: 481 TNSIYDALLSLTAL 495
           TNSIYDALLSLTAL
Sbjct: 481 TNSIYDALLSLTAL 494

[Close]

BLAST of Carg04587 vs. NCBI nr
Match: XP_022990332.1 (probable pectate lyase 12 [Cucurbita maxima])

HSP 1 Score: 980.7 bits (2534), Expect = 4.6e-282
Identity = 488/494 (98.79%), Postives = 491/494 (99.39%), Query Frame = 0


Query: 1   MFAAIAILLFSWFLSSSLPSMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREMLSI 60
           M AAIAILLFSWFL+SSLPSMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREMLSI
Sbjct: 1   MLAAIAILLFSWFLNSSLPSMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREMLSI 60

Query: 61  HSKGQSNSCQTGNPIDDCWRCGSNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDS 120
           HSKGQSNSCQTGNPIDDCWRCGSNWQ NRQRLADCSIGFGRNAMGGKGGQIYIVTDSSD+
Sbjct: 61  HSKGQSNSCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDT 120

Query: 121 DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT 180
           DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT
Sbjct: 121 DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT 180

Query: 181 LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY 240
           LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY
Sbjct: 181 LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY 240

Query: 241 CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM 300
           CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM
Sbjct: 241 CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM 300

Query: 301 PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW 360
           PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW
Sbjct: 301 PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW 360

Query: 361 SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR 420
           SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR
Sbjct: 361 SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR 420

Query: 421 QSSSYPGDESFSNSGSSGSDGGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY 480
           QSSSY GDESFSNSGSSGSDGGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY
Sbjct: 421 QSSSYSGDESFSNSGSSGSDGGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY 480

Query: 481 TNSIYDALLSLTAL 495
           TNSIY+ALLSLTAL
Sbjct: 481 TNSIYNALLSLTAL 494

[Close]

BLAST of Carg04587 vs. NCBI nr
Match: KAG6602287.1 (putative pectate lyase 12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 960.3 bits (2481), Expect = 6.5e-276
Identity = 474/474 (100.00%), Postives = 474/474 (100.00%), Query Frame = 0


Query: 21  MAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREMLSIHSKGQSNSCQTGNPIDDCWR 80
           MAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREMLSIHSKGQSNSCQTGNPIDDCWR
Sbjct: 1   MAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREMLSIHSKGQSNSCQTGNPIDDCWR 60

Query: 81  CGSNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDSDPVNPRPGTLRYAVVQDEPL 140
           CGSNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDSDPVNPRPGTLRYAVVQDEPL
Sbjct: 61  CGSNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDSDPVNPRPGTLRYAVVQDEPL 120

Query: 141 WIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCITLQYISNVIIHNINIHHCIPT 200
           WIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCITLQYISNVIIHNINIHHCIPT
Sbjct: 121 WIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCITLQYISNVIIHNINIHHCIPT 180

Query: 201 GHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNN 260
           GHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNN
Sbjct: 181 GHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNN 240

Query: 261 YFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRMPRCRRGYIHVVNNEFRSWEM 320
           YFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRMPRCRRGYIHVVNNEFRSWEM
Sbjct: 241 YFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRMPRCRRGYIHVVNNEFRSWEM 300

Query: 321 YAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVP 380
           YAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVP
Sbjct: 301 YAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVP 360

Query: 381 SGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESRQSSSYPGDESFSNSGSSGSD 440
           SGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESRQSSSYPGDESFSNSGSSGSD
Sbjct: 361 SGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESRQSSSYPGDESFSNSGSSGSD 420

Query: 441 GGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLYTNSIYDALLSLTAL 495
           GGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLYTNSIYDALLSLTAL
Sbjct: 421 GGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLYTNSIYDALLSLTAL 474

[Close]

BLAST of Carg04587 vs. NCBI nr
Match: XP_038884299.1 (probable pectate lyase 12 [Benincasa hispida])

HSP 1 Score: 919.5 bits (2375), Expect = 1.3e-263
Identity = 452/496 (91.13%), Postives = 473/496 (95.36%), Query Frame = 0


Query: 1   MFAAIAILLFSWFLSSSLP--SMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREML 60
           MFA   IL F WFLSSSLP  ++A  +FNLT PHLLPDPETVAY+VQRSVNDSFSRR+ML
Sbjct: 1   MFATTGILFFIWFLSSSLPPLTIANLNFNLTVPHLLPDPETVAYQVQRSVNDSFSRRQML 60

Query: 61  SIHSKGQSNSCQTGNPIDDCWRCGSNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSS 120
           SIHSKGQSNSCQTGNPIDDCWRC SNWQ NRQRLADC IGFGR AMGGKGGQIYIVTDSS
Sbjct: 61  SIHSKGQSNSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRAAMGGKGGQIYIVTDSS 120

Query: 121 DSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC 180
           DSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC
Sbjct: 121 DSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC 180

Query: 181 ITLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSL 240
           ITLQYISN+IIHNINIHHC+PTGHTN+RSSPTH+GYRGKSDGDGISIFSSRNIWIDHCSL
Sbjct: 181 ITLQYISNIIIHNINIHHCVPTGHTNIRSSPTHIGYRGKSDGDGISIFSSRNIWIDHCSL 240

Query: 241 SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQ 300
           SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGH+DG+TPDS MQVTIAFNLFGEKLVQ
Sbjct: 241 SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSAMQVTIAFNLFGEKLVQ 300

Query: 301 RMPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAG 360
           RMPRCRRGYIHVVNN+FRSWEMYAIGGSG PTINSQGNRYIAPGNPNAKEVTKRVDTNAG
Sbjct: 301 RMPRCRRGYIHVVNNDFRSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEVTKRVDTNAG 360

Query: 361 DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRE 420
           DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASS+ PKSAALVDQLTLNAGVFGG+RE
Sbjct: 361 DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSLPPKSAALVDQLTLNAGVFGGSRE 420

Query: 421 SRQSSSYPGDESFSNSGSSGSDGGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILV 480
           SRQS+SYPGDES ++SGSSGSDGGGDYFGMIFGGGG+NSA PPSLSVVN+V+LTL T+LV
Sbjct: 421 SRQSNSYPGDESTTSSGSSGSDGGGDYFGMIFGGGGMNSAPPPSLSVVNVVILTLFTVLV 480

Query: 481 LYTNSIYDALLSLTAL 495
           LYTNS YD LLSLT L
Sbjct: 481 LYTNSNYDVLLSLTTL 496

[Close]

BLAST of Carg04587 vs. ExPASy Swiss-Prot
Match: Q9SCP2 (Probable pectate lyase 12 OS=Arabidopsis thaliana OX=3702 GN=At3g53190 PE=2 SV=2)

HSP 1 Score: 602.8 bits (1553), Expect = 3.4e-171
Identity = 309/480 (64.38%), Postives = 361/480 (75.21%), Query Frame = 0


Query: 7   ILLFSWFLSSSLPSMAAFSFN---LTDPHLLPDPETVAYEVQRSVNDSFSRREMLSIHSK 66
           +L FS FL   +P M     N   L  PH  PDPE VAY+VQ  VN S +RR+ L    +
Sbjct: 9   VLFFSLFL--LVPQMVFSMLNRTLLLIPH--PDPELVAYQVQWKVNASITRRQALDTTDQ 68

Query: 67  GQSNSCQTGNPIDDCWRCGSNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDSDPV 126
             S  C TGNPIDDCW+C  NW +NRQ LADC IGFG+ A+GGKGGQ Y VTDSSD D V
Sbjct: 69  AGSTPCITGNPIDDCWKCDPNWPNNRQGLADCGIGFGQYALGGKGGQFYFVTDSSDDDAV 128

Query: 127 NPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCITLQY 186
           NP+PGTLRY V+Q+EPLWIVF ++M IKLK EL+ NSYKTLDGRGANVHI GGGCITLQY
Sbjct: 129 NPKPGTLRYGVIQEEPLWIVFPSNMMIKLKQELIFNSYKTLDGRGANVHIVGGGCITLQY 188

Query: 187 ISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSYCTD 246
           +SN+IIHNI+IHHC  +G+TNVRSSPTH G+R KSDGDGISIF S++IWIDHCSLS C D
Sbjct: 189 VSNIIIHNIHIHHCYQSGNTNVRSSPTHYGFRTKSDGDGISIFGSKDIWIDHCSLSRCKD 248

Query: 247 GLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRMPRC 306
           GLIDA+MGSTGITISNN+FSHH+EVMLLGH D Y PDSGMQVTIAFN FGEKL+QRMPRC
Sbjct: 249 GLIDAVMGSTGITISNNFFSHHNEVMLLGHSDHYEPDSGMQVTIAFNHFGEKLIQRMPRC 308

Query: 307 RRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEW 366
           RRGYIHVVNN+F  WEMYAIGGSG PTINSQGNRY AP NP AKEVTKRV+T  GDW  W
Sbjct: 309 RRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPTNPFAKEVTKRVETPDGDWKGW 368

Query: 367 NWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESRQSS 426
           NWR+EGDI+VNGAFFV SGEG    Y KA SV PKSA+ + Q+T ++GV G    +    
Sbjct: 369 NWRSEGDILVNGAFFVASGEGAEMRYEKAYSVEPKSASFITQITFHSGVLGVGGRNNNLG 428

Query: 427 SYPGDESFSNSGSSGSDGGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLYTNS 484
            +    +  + G+SG D   DY   + G G  N     S SV+ + +L+ ++ LV++T+S
Sbjct: 429 MW---TTTGSEGTSGLDSYNDYTDEMSGAGSTNRL---SFSVL-VFLLSSISYLVVFTSS 477

[Close]

BLAST of Carg04587 vs. ExPASy Swiss-Prot
Match: Q93Z04 (Probable pectate lyase 13 OS=Arabidopsis thaliana OX=3702 GN=PMR6 PE=1 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 1.7e-162
Identity = 291/474 (61.39%), Postives = 355/474 (74.89%), Query Frame = 0


Query: 7   ILLFSWFLSSSLPSMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREM------LSI 66
           + LF   LS++ P       NLT PH  P P++VA  V RSVN+S +RR++       S 
Sbjct: 13  LCLFFTLLSATKP------LNLTLPHQHPSPDSVALHVIRSVNESLARRQLSSPSSSSSS 72

Query: 67  HSKGQSNSCQTGNPIDDCWRCG-SNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSSD 126
            S   S+SC+TGNPIDDCWRC  ++W  NRQRLADCSIGFG   +GGK G+IY+VTDSSD
Sbjct: 73  SSSSSSSSCRTGNPIDDCWRCSDADWSTNRQRLADCSIGFGHGTLGGKNGKIYVVTDSSD 132

Query: 127 SDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCI 186
           ++P NP PGTLRY V+Q+EPLWIVF+++M I+LK EL++NSYKTLDGRG+ VHITG GC+
Sbjct: 133 NNPTNPTPGTLRYGVIQEEPLWIVFSSNMLIRLKQELIINSYKTLDGRGSAVHITGNGCL 192

Query: 187 TLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLS 246
           TLQY+ ++IIHN++I+ C P+              RG+SDGDGISIF S+ IW+DHCS+S
Sbjct: 193 TLQYVQHIIIHNLHIYDCKPSAGFE---------KRGRSDGDGISIFGSQKIWVDHCSMS 252

Query: 247 YCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQR 306
           +CTDGLIDA+MGST ITISNNYF+HHDEVMLLGH+D Y PD+GMQVTIAFN FG+ LVQR
Sbjct: 253 HCTDGLIDAVMGSTAITISNNYFTHHDEVMLLGHDDNYAPDTGMQVTIAFNHFGQGLVQR 312

Query: 307 MPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDT-NAG 366
           MPRCRRGYIHVVNN+F  W+MYAIGGSG PTINSQGNRY AP +P+AKEVTKRVD+ + G
Sbjct: 313 MPRCRRGYIHVVNNDFTEWKMYAIGGSGNPTINSQGNRYSAPSDPSAKEVTKRVDSKDDG 372

Query: 367 DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRE 426
           +WS WNWRTEGD+M NGAFFV SGEG+S+MY KASSV PK+A+LVDQLT NAGVFGG R+
Sbjct: 373 EWSNWNWRTEGDLMENGAFFVASGEGMSSMYSKASSVDPKAASLVDQLTRNAGVFGGPRD 432

Query: 427 SRQSSSYPGDESFSNSGSSGSDGGGDYFGMIFGGG---GVNSALPPSLSVVNMV 470
            +  S         + G  GS GG    GM   GG   G +S+     +V  M+
Sbjct: 433 DQGQSGNSYSPYGGDGGGGGSSGGSSGGGMDVMGGTTRGSSSSSGDDSNVFQMI 471

[Close]

BLAST of Carg04587 vs. ExPASy Swiss-Prot
Match: Q9SVQ6 (Putative pectate lyase 14 OS=Arabidopsis thaliana OX=3702 GN=At4g13210 PE=3 SV=2)

HSP 1 Score: 520.0 bits (1338), Expect = 2.9e-146
Identity = 246/389 (63.24%), Postives = 296/389 (76.09%), Query Frame = 0


Query: 27  NLTD----PHLLPDPETVAYEVQRSVNDSFSRREMLSIHSKGQSNSCQTGNPIDDCWRCG 86
           NL+D     H + DPE +A  V  S+ +S  RR++      G  +SC TGNPIDDCWRC 
Sbjct: 46  NLSDGEWHEHAVKDPEEIAAMVDMSIRNSTYRRKL------GFFSSCSTGNPIDDCWRCD 105

Query: 87  SNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDSDPVNPRPGTLRYAVVQDEPLWI 146
             W   R+RLADC+IGFGRNA+GG+ G+ YIVTD SD DPV P+PGTLRYAV+QDEPLWI
Sbjct: 106 KKWHRRRKRLADCAIGFGRNAVGGRDGRYYIVTDPSDHDPVTPKPGTLRYAVIQDEPLWI 165

Query: 147 VFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCITLQYISNVIIHNINIHHCIPTGH 206
           VF  DM I L  EL+MNS+KT+DGRG NVHI GG C+T+QY++N+IIH INIH C  TG+
Sbjct: 166 VFKRDMVITLSQELIMNSFKTIDGRGVNVHIAGGACLTVQYVTNIIIHGINIHDCKRTGN 225

Query: 207 TNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNNYF 266
             VRSS +H G+R  +DGDGISIF S +IWIDH SLS C DGLIDAIMGST ITISNNY 
Sbjct: 226 AMVRSSESHYGWRTMADGDGISIFGSSHIWIDHNSLSSCADGLIDAIMGSTAITISNNYL 285

Query: 267 SHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRMPRCRRGYIHVVNNEFRSWEMYA 326
           +HH+E +LLGH D YT D  MQVTIA+N FGE L+QRMPRCR GY HVVNN++  WEMYA
Sbjct: 286 THHNEAILLGHTDSYTRDKMMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYA 345

Query: 327 IGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVPSG 386
           IGGS  PTINSQGNR++APGN  AKEVTKRV    G+W+ WNWR++GD+M+NGA+F  SG
Sbjct: 346 IGGSANPTINSQGNRFLAPGNRFAKEVTKRVGAGKGEWNNWNWRSQGDLMLNGAYFTSSG 405

Query: 387 EGLSNMYVKASSVAPKSAALVDQLTLNAG 412
            G S  Y +ASS+A KS++LV  LT ++G
Sbjct: 406 AGASANYARASSLAAKSSSLVGMLTSSSG 428

[Close]

BLAST of Carg04587 vs. ExPASy Swiss-Prot
Match: Q944R1 (Probable pectate lyase 15 OS=Arabidopsis thaliana OX=3702 GN=At4g13710 PE=2 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 7.2e-145
Identity = 242/379 (63.85%), Postives = 295/379 (77.84%), Query Frame = 0


Query: 36  DPETVAYEVQRSVNDSFSRREMLSIHSKGQSNSCQTGNPIDDCWRCGSNWQDNRQRLADC 95
           DP+ VA EV + V  S   R   +   K    SC TGNPIDDCWRC  NW  NR+RLADC
Sbjct: 88  DPDMVADEVAKLVQMSEQNR---TARRKLGFFSCGTGNPIDDCWRCDRNWHKNRKRLADC 147

Query: 96  SIGFGRNAMGGKGGQIYIVTDSSDSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYE 155
            IGFGRNA+GG+ G+ YIVTD +D D VNP+PGTLR+AV+Q+EPLWIVF  DM I+LK E
Sbjct: 148 GIGFGRNAIGGRDGRFYIVTDPTDEDVVNPKPGTLRHAVIQEEPLWIVFKRDMVIELKQE 207

Query: 156 LMMNSYKTLDGRGANVHITGGGCITLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYR 215
           L+MNS+KT+D RG+NVHI  G CIT+Q+I+NVIIH ++IH C PTG+  VRSSP+H G+R
Sbjct: 208 LIMNSFKTIDARGSNVHIANGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHFGWR 267

Query: 216 GKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHED 275
             +DGD +SIF S +IWIDH SLS+C DGL+DA+MGST IT+SNN+F+HH+EVMLLGH D
Sbjct: 268 TMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITVSNNHFTHHNEVMLLGHSD 327

Query: 276 GYTPDSGMQVTIAFNLFGEKLVQRMPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQG 335
            YT D  MQVTIA+N FGE LVQRMPRCR GY HVVNN++  WEMYAIGGS  PTINSQG
Sbjct: 328 SYTKDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQG 387

Query: 336 NRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSV 395
           NRY AP +  AKEVTKRV+T+A +W +WNWR+EGD+++NGAFF PSG G S  Y +ASS+
Sbjct: 388 NRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEGDLLLNGAFFRPSGAGASASYGRASSL 447

Query: 396 APKSAALVDQLTLNAGVFG 415
           A K +++VD +T  AG  G
Sbjct: 448 AAKPSSMVDTITSTAGALG 463

[Close]

BLAST of Carg04587 vs. ExPASy Swiss-Prot
Match: Q9C5M8 (Probable pectate lyase 18 OS=Arabidopsis thaliana OX=3702 GN=At4g24780 PE=2 SV=2)

HSP 1 Score: 513.1 bits (1320), Expect = 3.6e-144
Identity = 237/387 (61.24%), Postives = 295/387 (76.23%), Query Frame = 0


Query: 34  LPDPETVAYEVQRSVNDSFSRREMLSIHSKGQSNSCQTGNPIDDCWRCGSNWQDNRQRLA 93
           +PDPE+V  EV +S+N S + R  L         SC TGNPIDDCWRC  +W+ +RQRLA
Sbjct: 27  VPDPESVVEEVHKSINASVAGRRKLGY------LSCTTGNPIDDCWRCDPHWEQHRQRLA 86

Query: 94  DCSIGFGRNAMGGKGGQIYIVTDSSDSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLK 153
           DC+IGFG+NA+GG+ G+IY+VTDS + +PV+P+PGTLR+AVVQDEPLWI+F  DMTI+LK
Sbjct: 87  DCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLWIIFQRDMTIQLK 146

Query: 154 YELMMNSYKTLDGRGANVHITGGGCITLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVG 213
            EL+MNS+KT+DGRGA+VHI+GG CIT+QY++N+IIH I+IH C   G+  VRSSP H G
Sbjct: 147 EELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGGNAMVRSSPRHFG 206

Query: 214 YRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGH 273
           +R  SDGDG+SIF   ++W+DHCS S C DGLIDAIMGST IT+SNN+ +HHD+VMLLGH
Sbjct: 207 WRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNHMTHHDKVMLLGH 266

Query: 274 EDGYTPDSGMQVTIAFNLFGEKLVQRMPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINS 333
            D Y+ D  MQVTIAFN FGE LVQRMPRCR GY HVVNN++  WEMYAIGGS  PTINS
Sbjct: 267 SDTYSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINS 326

Query: 334 QGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKAS 393
           QGNR++AP    +KEVTK  D    +W  WNWR+ GD+++NGAFF PSG   S+ Y KAS
Sbjct: 327 QGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAASSSYAKAS 386

Query: 394 SVAPKSAALVDQLTLNAGVFGGTRESR 421
           S+  K ++LV  LT  +G     + SR
Sbjct: 387 SLGAKPSSLVGPLTSTSGALNCRKGSR 407

[Close]

BLAST of Carg04587 vs. ExPASy TrEMBL
Match: A0A6J1H1R2 (Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111459254 PE=3 SV=1)

HSP 1 Score: 993.4 bits (2567), Expect = 3.3e-286
Identity = 494/494 (100.00%), Postives = 494/494 (100.00%), Query Frame = 0


Query: 1   MFAAIAILLFSWFLSSSLPSMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREMLSI 60
           MFAAIAILLFSWFLSSSLPSMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREMLSI
Sbjct: 1   MFAAIAILLFSWFLSSSLPSMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREMLSI 60

Query: 61  HSKGQSNSCQTGNPIDDCWRCGSNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDS 120
           HSKGQSNSCQTGNPIDDCWRCGSNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDS
Sbjct: 61  HSKGQSNSCQTGNPIDDCWRCGSNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDS 120

Query: 121 DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT 180
           DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT
Sbjct: 121 DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT 180

Query: 181 LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY 240
           LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY
Sbjct: 181 LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY 240

Query: 241 CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM 300
           CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM
Sbjct: 241 CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM 300

Query: 301 PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW 360
           PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW
Sbjct: 301 PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW 360

Query: 361 SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR 420
           SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR
Sbjct: 361 SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR 420

Query: 421 QSSSYPGDESFSNSGSSGSDGGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY 480
           QSSSYPGDESFSNSGSSGSDGGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY
Sbjct: 421 QSSSYPGDESFSNSGSSGSDGGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY 480

Query: 481 TNSIYDALLSLTAL 495
           TNSIYDALLSLTAL
Sbjct: 481 TNSIYDALLSLTAL 494

[Close]

BLAST of Carg04587 vs. ExPASy TrEMBL
Match: A0A6J1JIE0 (Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111487228 PE=3 SV=1)

HSP 1 Score: 980.7 bits (2534), Expect = 2.2e-282
Identity = 488/494 (98.79%), Postives = 491/494 (99.39%), Query Frame = 0


Query: 1   MFAAIAILLFSWFLSSSLPSMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREMLSI 60
           M AAIAILLFSWFL+SSLPSMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREMLSI
Sbjct: 1   MLAAIAILLFSWFLNSSLPSMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREMLSI 60

Query: 61  HSKGQSNSCQTGNPIDDCWRCGSNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDS 120
           HSKGQSNSCQTGNPIDDCWRCGSNWQ NRQRLADCSIGFGRNAMGGKGGQIYIVTDSSD+
Sbjct: 61  HSKGQSNSCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDT 120

Query: 121 DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT 180
           DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT
Sbjct: 121 DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT 180

Query: 181 LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY 240
           LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY
Sbjct: 181 LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY 240

Query: 241 CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM 300
           CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM
Sbjct: 241 CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM 300

Query: 301 PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW 360
           PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW
Sbjct: 301 PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW 360

Query: 361 SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR 420
           SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR
Sbjct: 361 SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR 420

Query: 421 QSSSYPGDESFSNSGSSGSDGGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY 480
           QSSSY GDESFSNSGSSGSDGGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY
Sbjct: 421 QSSSYSGDESFSNSGSSGSDGGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY 480

Query: 481 TNSIYDALLSLTAL 495
           TNSIY+ALLSLTAL
Sbjct: 481 TNSIYNALLSLTAL 494

[Close]

BLAST of Carg04587 vs. ExPASy TrEMBL
Match: A0A5D3BPB8 (Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00090 PE=3 SV=1)

HSP 1 Score: 898.7 bits (2321), Expect = 1.1e-257
Identity = 441/496 (88.91%), Postives = 469/496 (94.56%), Query Frame = 0


Query: 1   MFAAIAILLFSWFLSSSL--PSMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREML 60
           MFA   +L F WFLS +L   +MA F+FNLT  +LLPDPETVAY+VQRSVNDSF RR+ML
Sbjct: 1   MFATTGVLFFIWFLSCTLLPLTMATFNFNLTVQNLLPDPETVAYQVQRSVNDSFFRRQML 60

Query: 61  SIHSKGQSNSCQTGNPIDDCWRCGSNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSS 120
           S+HSKGQS+SCQTGNPIDDCWRC SNWQ NRQRLADC IGFGR+AMGGKGGQIY+VTDSS
Sbjct: 61  SVHSKGQSSSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSS 120

Query: 121 DSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC 180
           D DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC
Sbjct: 121 DPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC 180

Query: 181 ITLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSL 240
           ITLQYISNVIIHNINIHHC+PTGHTN+RSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSL
Sbjct: 181 ITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSL 240

Query: 241 SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQ 300
           SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGH+DG+TPDSGMQVTIAFNLFGEKLVQ
Sbjct: 241 SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKLVQ 300

Query: 301 RMPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAG 360
           RMPRCRRGYIHVVNN+FRSWEMYAIGGSG PTINSQGNRYIAPGNPNAKEVTKRVDTNAG
Sbjct: 301 RMPRCRRGYIHVVNNDFRSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEVTKRVDTNAG 360

Query: 361 DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRE 420
           DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASS+ PKSAALVDQLTLNAGVFGG+RE
Sbjct: 361 DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSLPPKSAALVDQLTLNAGVFGGSRE 420

Query: 421 SRQSSSYPGDESFSNSGSSGSDGGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILV 480
           +RQSSSYPGDE+ S+SGSSGSDGGGDYFGMIFGGGG+N+A PPSLS VNMV+LTL T+L+
Sbjct: 421 TRQSSSYPGDETSSSSGSSGSDGGGDYFGMIFGGGGINNAPPPSLSAVNMVILTLFTVLI 480

Query: 481 LYTNSIYDALLSLTAL 495
           LYTN+ YDALL   +L
Sbjct: 481 LYTNN-YDALLLTLSL 495

[Close]

BLAST of Carg04587 vs. ExPASy TrEMBL
Match: A0A1S3C4R4 (Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103496461 PE=3 SV=1)

HSP 1 Score: 898.7 bits (2321), Expect = 1.1e-257
Identity = 441/496 (88.91%), Postives = 469/496 (94.56%), Query Frame = 0


Query: 1   MFAAIAILLFSWFLSSSL--PSMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREML 60
           MFA   +L F WFLS +L   +MA F+FNLT  +LLPDPETVAY+VQRSVNDSF RR+ML
Sbjct: 1   MFATTGVLFFIWFLSCTLLPLTMATFNFNLTVQNLLPDPETVAYQVQRSVNDSFFRRQML 60

Query: 61  SIHSKGQSNSCQTGNPIDDCWRCGSNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSS 120
           S+HSKGQS+SCQTGNPIDDCWRC SNWQ NRQRLADC IGFGR+AMGGKGGQIY+VTDSS
Sbjct: 61  SVHSKGQSSSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSS 120

Query: 121 DSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC 180
           D DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC
Sbjct: 121 DPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC 180

Query: 181 ITLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSL 240
           ITLQYISNVIIHNINIHHC+PTGHTN+RSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSL
Sbjct: 181 ITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSL 240

Query: 241 SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQ 300
           SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGH+DG+TPDSGMQVTIAFNLFGEKLVQ
Sbjct: 241 SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKLVQ 300

Query: 301 RMPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAG 360
           RMPRCRRGYIHVVNN+FRSWEMYAIGGSG PTINSQGNRYIAPGNPNAKEVTKRVDTNAG
Sbjct: 301 RMPRCRRGYIHVVNNDFRSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEVTKRVDTNAG 360

Query: 361 DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRE 420
           DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASS+ PKSAALVDQLTLNAGVFGG+RE
Sbjct: 361 DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSLPPKSAALVDQLTLNAGVFGGSRE 420

Query: 421 SRQSSSYPGDESFSNSGSSGSDGGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILV 480
           +RQSSSYPGDE+ S+SGSSGSDGGGDYFGMIFGGGG+N+A PPSLS VNMV+LTL T+L+
Sbjct: 421 TRQSSSYPGDETSSSSGSSGSDGGGDYFGMIFGGGGINNAPPPSLSAVNMVILTLFTVLI 480

Query: 481 LYTNSIYDALLSLTAL 495
           LYTN+ YDALL   +L
Sbjct: 481 LYTNN-YDALLLTLSL 495

[Close]

BLAST of Carg04587 vs. ExPASy TrEMBL
Match: A0A6J1FLS3 (Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111445375 PE=3 SV=1)

HSP 1 Score: 891.7 bits (2303), Expect = 1.4e-255
Identity = 444/495 (89.70%), Postives = 467/495 (94.34%), Query Frame = 0


Query: 1   MFAAIAILLFSWFLSSSL--PSMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREML 60
           MFA   IL F W LSSSL  P+MA F+FNLT PHLLPDPETVAY+VQR+VNDSFSRR+ML
Sbjct: 1   MFATTGILFFIWVLSSSLPPPAMATFAFNLTVPHLLPDPETVAYQVQRAVNDSFSRRQML 60

Query: 61  SIHSKGQSNSCQTGNPIDDCWRCGSNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSS 120
           S++SK QS+SCQTGNPIDDCWRC SNWQ NRQRLADC IGFGR+AMGGKGGQIY+VTDSS
Sbjct: 61  SVNSKDQSSSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSS 120

Query: 121 DSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC 180
           DSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC
Sbjct: 121 DSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC 180

Query: 181 ITLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSL 240
           +TLQYISNVIIHNINIHHCIPTGHTN+RSSPTH+GYRGKSDGDGISIFSSRNIWIDHCSL
Sbjct: 181 VTLQYISNVIIHNINIHHCIPTGHTNIRSSPTHIGYRGKSDGDGISIFSSRNIWIDHCSL 240

Query: 241 SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQ 300
           SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGH+DGY+PDS MQVTIAFNLFGEKLVQ
Sbjct: 241 SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGYSPDSAMQVTIAFNLFGEKLVQ 300

Query: 301 RMPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAG 360
           RMPRCRRGY HVVNN+FRSWEMYAIGGSG PTINSQGNRYIAPGNPNAKEVTKRVDTNAG
Sbjct: 301 RMPRCRRGYFHVVNNDFRSWEMYAIGGSGDPTINSQGNRYIAPGNPNAKEVTKRVDTNAG 360

Query: 361 DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRE 420
           DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVD+LTLNAGVFGG RE
Sbjct: 361 DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDRLTLNAGVFGGARE 420

Query: 421 SRQSSSYPGDESFSNSGSSGSDGGGDYFGMIF-GGGGVNSA-LPPSLSVVNMVVLTLLTI 480
           +RQS SYPGDES S+S SSGSDGGGDYFGMIF GGGGVNSA  PP LSVVNM++L+LLT+
Sbjct: 421 NRQSYSYPGDESSSSSTSSGSDGGGDYFGMIFGGGGGVNSAPPPPCLSVVNMLMLSLLTV 480

Query: 481 LVLYTNSIYDALLSL 492
           LVLYTNS   ALLSL
Sbjct: 481 LVLYTNSYDSALLSL 495

[Close]

BLAST of Carg04587 vs. TAIR 10
Match: AT3G53190.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 602.8 bits (1553), Expect = 2.4e-172
Identity = 309/480 (64.38%), Postives = 361/480 (75.21%), Query Frame = 0


Query: 7   ILLFSWFLSSSLPSMAAFSFN---LTDPHLLPDPETVAYEVQRSVNDSFSRREMLSIHSK 66
           +L FS FL   +P M     N   L  PH  PDPE VAY+VQ  VN S +RR+ L    +
Sbjct: 9   VLFFSLFL--LVPQMVFSMLNRTLLLIPH--PDPELVAYQVQWKVNASITRRQALDTTDQ 68

Query: 67  GQSNSCQTGNPIDDCWRCGSNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDSDPV 126
             S  C TGNPIDDCW+C  NW +NRQ LADC IGFG+ A+GGKGGQ Y VTDSSD D V
Sbjct: 69  AGSTPCITGNPIDDCWKCDPNWPNNRQGLADCGIGFGQYALGGKGGQFYFVTDSSDDDAV 128

Query: 127 NPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCITLQY 186
           NP+PGTLRY V+Q+EPLWIVF ++M IKLK EL+ NSYKTLDGRGANVHI GGGCITLQY
Sbjct: 129 NPKPGTLRYGVIQEEPLWIVFPSNMMIKLKQELIFNSYKTLDGRGANVHIVGGGCITLQY 188

Query: 187 ISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSYCTD 246
           +SN+IIHNI+IHHC  +G+TNVRSSPTH G+R KSDGDGISIF S++IWIDHCSLS C D
Sbjct: 189 VSNIIIHNIHIHHCYQSGNTNVRSSPTHYGFRTKSDGDGISIFGSKDIWIDHCSLSRCKD 248

Query: 247 GLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRMPRC 306
           GLIDA+MGSTGITISNN+FSHH+EVMLLGH D Y PDSGMQVTIAFN FGEKL+QRMPRC
Sbjct: 249 GLIDAVMGSTGITISNNFFSHHNEVMLLGHSDHYEPDSGMQVTIAFNHFGEKLIQRMPRC 308

Query: 307 RRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEW 366
           RRGYIHVVNN+F  WEMYAIGGSG PTINSQGNRY AP NP AKEVTKRV+T  GDW  W
Sbjct: 309 RRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPTNPFAKEVTKRVETPDGDWKGW 368

Query: 367 NWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESRQSS 426
           NWR+EGDI+VNGAFFV SGEG    Y KA SV PKSA+ + Q+T ++GV G    +    
Sbjct: 369 NWRSEGDILVNGAFFVASGEGAEMRYEKAYSVEPKSASFITQITFHSGVLGVGGRNNNLG 428

Query: 427 SYPGDESFSNSGSSGSDGGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLYTNS 484
            +    +  + G+SG D   DY   + G G  N     S SV+ + +L+ ++ LV++T+S
Sbjct: 429 MW---TTTGSEGTSGLDSYNDYTDEMSGAGSTNRL---SFSVL-VFLLSSISYLVVFTSS 477

[Close]

BLAST of Carg04587 vs. TAIR 10
Match: AT5G04310.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 595.9 bits (1535), Expect = 3.0e-170
Identity = 304/499 (60.92%), Postives = 365/499 (73.15%), Query Frame = 0


Query: 5   IAILLFSWFLSSS----LPSMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREMLSI 64
           I I+ F   +S S      S +A  FNL+ PH  P PE V   VQR +NDS SRR++L+ 
Sbjct: 17  ICIIWFCLLVSLSHHGRASSTSASIFNLSLPHQHPFPEHVVLNVQRKLNDSLSRRQLLTY 76

Query: 65  HSKGQSN------SCQTGNPIDDCWRCGSNWQDNRQRLADCSIGFGRNAMGGKGGQIYIV 124
                +       SC TGNPIDDCWRC  NW  NRQRLADCSIGFG+  +GGKGGQ Y+V
Sbjct: 77  QQDDGTTASSPIPSCITGNPIDDCWRCDPNWSANRQRLADCSIGFGQGTLGGKGGQFYLV 136

Query: 125 TDSSDSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHIT 184
           TDSSD+D  NP PGTLR+AV+Q EPLWI+F++DM IKLK+EL++ SYKT+DGRG N+ IT
Sbjct: 137 TDSSDNDAANPIPGTLRHAVIQPEPLWIIFSSDMGIKLKHELIIGSYKTIDGRGTNIQIT 196

Query: 185 GGGCITLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWID 244
           G GC+T+Q +S+VIIHN++IHHC P+G+T V SSPTHVG+RG SDGDGIS+ +S +IW+D
Sbjct: 197 GHGCLTIQQVSHVIIHNVHIHHCKPSGNTLVASSPTHVGFRGVSDGDGISVSASHHIWVD 256

Query: 245 HCSLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGE 304
           HCSL YC DGLID I+ ST +TISNNYFSHHDEVMLLGH+D YT D GMQVTIAFN FGE
Sbjct: 257 HCSLGYCADGLIDVILASTAVTISNNYFSHHDEVMLLGHDDRYTADKGMQVTIAFNHFGE 316

Query: 305 KLVQRMPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVD 364
            LVQRMPRCR GYIHVVNN+F +WEMYAIGGS  PTINSQGNRY AP +PNAKEVTKRVD
Sbjct: 317 GLVQRMPRCRHGYIHVVNNDFTAWEMYAIGGSASPTINSQGNRYTAPIDPNAKEVTKRVD 376

Query: 365 TNAGDWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFG 424
           +N   WS WNWRTEGD+MVNGAFFVPSG+G+S  Y +A+SV PK+AA++DQLT+NAGVFG
Sbjct: 377 SNEKHWSGWNWRTEGDVMVNGAFFVPSGDGVSPAYARATSVQPKAAAIIDQLTVNAGVFG 436

Query: 425 G-TRESRQSSSYPG------------DESFSNSGSSGSDGGGDYFGMIFGGGGVNSALPP 481
             +  + Q  S+PG             +S    G SGSD     F +IFG      AL P
Sbjct: 437 DPSGRNGQGGSFPGITNGGGTITRGYSKSGPAGGGSGSDSDDGLFTLIFGNNSGAVALRP 496

[Close]

BLAST of Carg04587 vs. TAIR 10
Match: AT3G54920.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 573.9 bits (1478), Expect = 1.2e-163
Identity = 291/474 (61.39%), Postives = 355/474 (74.89%), Query Frame = 0


Query: 7   ILLFSWFLSSSLPSMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREM------LSI 66
           + LF   LS++ P       NLT PH  P P++VA  V RSVN+S +RR++       S 
Sbjct: 13  LCLFFTLLSATKP------LNLTLPHQHPSPDSVALHVIRSVNESLARRQLSSPSSSSSS 72

Query: 67  HSKGQSNSCQTGNPIDDCWRCG-SNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSSD 126
            S   S+SC+TGNPIDDCWRC  ++W  NRQRLADCSIGFG   +GGK G+IY+VTDSSD
Sbjct: 73  SSSSSSSSCRTGNPIDDCWRCSDADWSTNRQRLADCSIGFGHGTLGGKNGKIYVVTDSSD 132

Query: 127 SDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCI 186
           ++P NP PGTLRY V+Q+EPLWIVF+++M I+LK EL++NSYKTLDGRG+ VHITG GC+
Sbjct: 133 NNPTNPTPGTLRYGVIQEEPLWIVFSSNMLIRLKQELIINSYKTLDGRGSAVHITGNGCL 192

Query: 187 TLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLS 246
           TLQY+ ++IIHN++I+ C P+              RG+SDGDGISIF S+ IW+DHCS+S
Sbjct: 193 TLQYVQHIIIHNLHIYDCKPSAGFE---------KRGRSDGDGISIFGSQKIWVDHCSMS 252

Query: 247 YCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQR 306
           +CTDGLIDA+MGST ITISNNYF+HHDEVMLLGH+D Y PD+GMQVTIAFN FG+ LVQR
Sbjct: 253 HCTDGLIDAVMGSTAITISNNYFTHHDEVMLLGHDDNYAPDTGMQVTIAFNHFGQGLVQR 312

Query: 307 MPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDT-NAG 366
           MPRCRRGYIHVVNN+F  W+MYAIGGSG PTINSQGNRY AP +P+AKEVTKRVD+ + G
Sbjct: 313 MPRCRRGYIHVVNNDFTEWKMYAIGGSGNPTINSQGNRYSAPSDPSAKEVTKRVDSKDDG 372

Query: 367 DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRE 426
           +WS WNWRTEGD+M NGAFFV SGEG+S+MY KASSV PK+A+LVDQLT NAGVFGG R+
Sbjct: 373 EWSNWNWRTEGDLMENGAFFVASGEGMSSMYSKASSVDPKAASLVDQLTRNAGVFGGPRD 432

Query: 427 SRQSSSYPGDESFSNSGSSGSDGGGDYFGMIFGGG---GVNSALPPSLSVVNMV 470
            +  S         + G  GS GG    GM   GG   G +S+     +V  M+
Sbjct: 433 DQGQSGNSYSPYGGDGGGGGSSGGSSGGGMDVMGGTTRGSSSSSGDDSNVFQMI 471

[Close]

BLAST of Carg04587 vs. TAIR 10
Match: AT4G13210.2 (Pectin lyase-like superfamily protein )

HSP 1 Score: 520.0 bits (1338), Expect = 2.1e-147
Identity = 246/389 (63.24%), Postives = 296/389 (76.09%), Query Frame = 0


Query: 27  NLTD----PHLLPDPETVAYEVQRSVNDSFSRREMLSIHSKGQSNSCQTGNPIDDCWRCG 86
           NL+D     H + DPE +A  V  S+ +S  RR++      G  +SC TGNPIDDCWRC 
Sbjct: 46  NLSDGEWHEHAVKDPEEIAAMVDMSIRNSTYRRKL------GFFSSCSTGNPIDDCWRCD 105

Query: 87  SNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDSDPVNPRPGTLRYAVVQDEPLWI 146
             W   R+RLADC+IGFGRNA+GG+ G+ YIVTD SD DPV P+PGTLRYAV+QDEPLWI
Sbjct: 106 KKWHRRRKRLADCAIGFGRNAVGGRDGRYYIVTDPSDHDPVTPKPGTLRYAVIQDEPLWI 165

Query: 147 VFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCITLQYISNVIIHNINIHHCIPTGH 206
           VF  DM I L  EL+MNS+KT+DGRG NVHI GG C+T+QY++N+IIH INIH C  TG+
Sbjct: 166 VFKRDMVITLSQELIMNSFKTIDGRGVNVHIAGGACLTVQYVTNIIIHGINIHDCKRTGN 225

Query: 207 TNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNNYF 266
             VRSS +H G+R  +DGDGISIF S +IWIDH SLS C DGLIDAIMGST ITISNNY 
Sbjct: 226 AMVRSSESHYGWRTMADGDGISIFGSSHIWIDHNSLSSCADGLIDAIMGSTAITISNNYL 285

Query: 267 SHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRMPRCRRGYIHVVNNEFRSWEMYA 326
           +HH+E +LLGH D YT D  MQVTIA+N FGE L+QRMPRCR GY HVVNN++  WEMYA
Sbjct: 286 THHNEAILLGHTDSYTRDKMMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYA 345

Query: 327 IGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVPSG 386
           IGGS  PTINSQGNR++APGN  AKEVTKRV    G+W+ WNWR++GD+M+NGA+F  SG
Sbjct: 346 IGGSANPTINSQGNRFLAPGNRFAKEVTKRVGAGKGEWNNWNWRSQGDLMLNGAYFTSSG 405

Query: 387 EGLSNMYVKASSVAPKSAALVDQLTLNAG 412
            G S  Y +ASS+A KS++LV  LT ++G
Sbjct: 406 AGASANYARASSLAAKSSSLVGMLTSSSG 428

[Close]

BLAST of Carg04587 vs. TAIR 10
Match: AT4G13210.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 519.6 bits (1337), Expect = 2.7e-147
Identity = 243/380 (63.95%), Postives = 292/380 (76.84%), Query Frame = 0


Query: 32  HLLPDPETVAYEVQRSVNDSFSRREMLSIHSKGQSNSCQTGNPIDDCWRCGSNWQDNRQR 91
           H + DPE +A  V  S+ +S  RR++      G  +SC TGNPIDDCWRC   W   R+R
Sbjct: 18  HAVKDPEEIAAMVDMSIRNSTYRRKL------GFFSSCSTGNPIDDCWRCDKKWHRRRKR 77

Query: 92  LADCSIGFGRNAMGGKGGQIYIVTDSSDSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIK 151
           LADC+IGFGRNA+GG+ G+ YIVTD SD DPV P+PGTLRYAV+QDEPLWIVF  DM I 
Sbjct: 78  LADCAIGFGRNAVGGRDGRYYIVTDPSDHDPVTPKPGTLRYAVIQDEPLWIVFKRDMVIT 137

Query: 152 LKYELMMNSYKTLDGRGANVHITGGGCITLQYISNVIIHNINIHHCIPTGHTNVRSSPTH 211
           L  EL+MNS+KT+DGRG NVHI GG C+T+QY++N+IIH INIH C  TG+  VRSS +H
Sbjct: 138 LSQELIMNSFKTIDGRGVNVHIAGGACLTVQYVTNIIIHGINIHDCKRTGNAMVRSSESH 197

Query: 212 VGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLL 271
            G+R  +DGDGISIF S +IWIDH SLS C DGLIDAIMGST ITISNNY +HH+E +LL
Sbjct: 198 YGWRTMADGDGISIFGSSHIWIDHNSLSSCADGLIDAIMGSTAITISNNYLTHHNEAILL 257

Query: 272 GHEDGYTPDSGMQVTIAFNLFGEKLVQRMPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTI 331
           GH D YT D  MQVTIA+N FGE L+QRMPRCR GY HVVNN++  WEMYAIGGS  PTI
Sbjct: 258 GHTDSYTRDKMMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTI 317

Query: 332 NSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVK 391
           NSQGNR++APGN  AKEVTKRV    G+W+ WNWR++GD+M+NGA+F  SG G S  Y +
Sbjct: 318 NSQGNRFLAPGNRFAKEVTKRVGAGKGEWNNWNWRSQGDLMLNGAYFTSSGAGASANYAR 377

Query: 392 ASSVAPKSAALVDQLTLNAG 412
           ASS+A KS++LV  LT ++G
Sbjct: 378 ASSLAAKSSSLVGMLTSSSG 391

The following BLAST results are available for this feature:

BLAST of Carg04587 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957835.1	6.9e-286	100.00	probable pectate lyase 12 [Cucurbita moschata] >KAG7032968.1 putative pectate ly...	[more]
XP_023524526.1	4.2e-283	98.99	probable pectate lyase 12 [Cucurbita pepo subsp. pepo]	[more]
XP_022990332.1	4.6e-282	98.79	probable pectate lyase 12 [Cucurbita maxima]	[more]
KAG6602287.1	6.5e-276	100.00	putative pectate lyase 12, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038884299.1	1.3e-263	91.13	probable pectate lyase 12 [Benincasa hispida]	[more]

BLAST of Carg04587 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCP2	3.4e-171	64.38	Probable pectate lyase 12 OS=Arabidopsis thaliana OX=3702 GN=At3g53190 PE=2 SV=2	[more]
Q93Z04	1.7e-162	61.39	Probable pectate lyase 13 OS=Arabidopsis thaliana OX=3702 GN=PMR6 PE=1 SV=1	[more]
Q9SVQ6	2.9e-146	63.24	Putative pectate lyase 14 OS=Arabidopsis thaliana OX=3702 GN=At4g13210 PE=3 SV=2	[more]
Q944R1	7.2e-145	63.85	Probable pectate lyase 15 OS=Arabidopsis thaliana OX=3702 GN=At4g13710 PE=2 SV=1	[more]
Q9C5M8	3.6e-144	61.24	Probable pectate lyase 18 OS=Arabidopsis thaliana OX=3702 GN=At4g24780 PE=2 SV=2	[more]

BLAST of Carg04587 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H1R2	3.3e-286	100.00	Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111459254 PE=3 SV=1	[more]
A0A6J1JIE0	2.2e-282	98.79	Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111487228 PE=3 SV=1	[more]
A0A5D3BPB8	1.1e-257	88.91	Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00090 ...	[more]
A0A1S3C4R4	1.1e-257	88.91	Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103496461 PE=3 SV=1	[more]
A0A6J1FLS3	1.4e-255	89.70	Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111445375 PE=3 SV=1	[more]

BLAST of Carg04587 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53190.1	2.4e-172	64.38	Pectin lyase-like superfamily protein	[more]
AT5G04310.1	3.0e-170	60.92	Pectin lyase-like superfamily protein	[more]
AT3G54920.1	1.2e-163	61.39	Pectin lyase-like superfamily protein	[more]
AT4G13210.2	2.1e-147	63.24	Pectin lyase-like superfamily protein	[more]
AT4G13210.1	2.7e-147	63.95	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 119..144 score: 63.74 coord: 363..387 score: 51.24 coord: 95..112 score: 58.47 coord: 155..171 score: 67.79 coord: 392..415 score: 29.17 coord: 299..318 score: 62.86 coord: 219..240 score: 65.15 coord: 321..340 score: 74.29
IPR002022	Pectate lyase	SMART	SM00656	amb_all	coord: 147..344 e-value: 2.4E-89 score: 312.8
IPR002022	Pectate lyase	PFAM	PF00544	Pectate_lyase_4	coord: 155..324 e-value: 4.8E-22 score: 78.6
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 72..414 e-value: 2.5E-118 score: 397.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 416..438
None	No IPR available	PANTHER	PTHR31683:SF122	PECTATE LYASE	coord: 5..432
IPR045032	Pectin lyase family	PANTHER	PTHR31683	PECTATE LYASE 18-RELATED	coord: 5..432
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 73..412

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04587-RA	Carg04587-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045490	pectin catabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0030570	pectate lyase activity