Carg04580 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg04580
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Location	Carg_Chr04: 19600615 .. 19601424 (+)
RNA-Seq Expression	Carg04580
Synteny	Carg04580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATGGATTCTCCACAGTTGATGGCTTTGTGGAGATAGTCGAAAGCTCGGCCGAGATGATCAAGTATATCGCAAATGAACCGTCAACTGGGCTTTTCTACATTCAACAGCATACAGAAAATGCCGTTCCCAACGTTCTCAATATGAAGAATAGTGTGGCGAACACGTCTCGTGAATCGACTTTGCACACTGAAGATTCGGAGGATTCGATCACGATGTTGAGGTCGATGAAAGAATGTGGATTTCCCATTGCTGATGAGATGATTAGAGACATCAAAAAGTCTCTTGCTGTTATGTCAACCAAACAGCCAAGAAGAGGCTTGATCCGTAGTACTTATGGTATGCAGCCACCAGGGAGAGTAAGCACTTGGAGGTCAGCCACTTGGGGGCGAAGTGTAGCCATTGCCCCGCGCGATGACGACGGTGGTGGCTATATTTCAACGGTGTTCAAGTCAGCTAGAGAAACAGCGAGCAACTTTAAGTGGCCACAGCTCGACATCGTGGAAGATCTTGCACGAGTCGAAGTTCATAAGGCTCAGCCAGAACCTAACCAACCATCAGTTCTATCAGCTAGTTCTAGTTCTTCACAGCCAGATATGGATAGCGACGAGCTGCCTCTGTCTTGTCAAGTGAACGATGTGTTGCAATGCGACGATCGGGTTGATGTCGGTTTGGACACTGATGTAGTTTCGGTGTCCGATCGTTTTGACGATTTCAGGGCTGATAAAGAAGCAAAATTGAAAGATTGGTTGGAAGGGTCTGGCAGCTTGAATGATATAAGAGATTTGAGCGCAGGGAAAGGGCATTAA

mRNA sequence

ATGTATGGATTCTCCACAGTTGATGGCTTTGTGGAGATAGTCGAAAGCTCGGCCGAGATGATCAAGTATATCGCAAATGAACCGTCAACTGGGCTTTTCTACATTCAACAGCATACAGAAAATGCCGTTCCCAACGTTCTCAATATGAAGAATAGTGTGGCGAACACGTCTCGTGAATCGACTTTGCACACTGAAGATTCGGAGGATTCGATCACGATGTTGAGGTCGATGAAAGAATGTGGATTTCCCATTGCTGATGAGATGATTAGAGACATCAAAAAGTCTCTTGCTGTTATGTCAACCAAACAGCCAAGAAGAGGCTTGATCCGTAGTACTTATGGTATGCAGCCACCAGGGAGAGTAAGCACTTGGAGGTCAGCCACTTGGGGGCGAAGTGTAGCCATTGCCCCGCGCGATGACGACGGTGGTGGCTATATTTCAACGGTGTTCAAGTCAGCTAGAGAAACAGCGAGCAACTTTAAGTGGCCACAGCTCGACATCGTGGAAGATCTTGCACGAGTCGAAGTTCATAAGGCTCAGCCAGAACCTAACCAACCATCAGTTCTATCAGCTAGTTCTAGTTCTTCACAGCCAGATATGGATAGCGACGAGCTGCCTCTGTCTTGTCAAGTGAACGATGTGTTGCAATGCGACGATCGGGTTGATGTCGGTTTGGACACTGATGTAGTTTCGGTGTCCGATCGTTTTGACGATTTCAGGGCTGATAAAGAAGCAAAATTGAAAGATTGGTTGGAAGGGTCTGGCAGCTTGAATGATATAAGAGATTTGAGCGCAGGGAAAGGGCATTAA

Coding sequence (CDS)

ATGTATGGATTCTCCACAGTTGATGGCTTTGTGGAGATAGTCGAAAGCTCGGCCGAGATGATCAAGTATATCGCAAATGAACCGTCAACTGGGCTTTTCTACATTCAACAGCATACAGAAAATGCCGTTCCCAACGTTCTCAATATGAAGAATAGTGTGGCGAACACGTCTCGTGAATCGACTTTGCACACTGAAGATTCGGAGGATTCGATCACGATGTTGAGGTCGATGAAAGAATGTGGATTTCCCATTGCTGATGAGATGATTAGAGACATCAAAAAGTCTCTTGCTGTTATGTCAACCAAACAGCCAAGAAGAGGCTTGATCCGTAGTACTTATGGTATGCAGCCACCAGGGAGAGTAAGCACTTGGAGGTCAGCCACTTGGGGGCGAAGTGTAGCCATTGCCCCGCGCGATGACGACGGTGGTGGCTATATTTCAACGGTGTTCAAGTCAGCTAGAGAAACAGCGAGCAACTTTAAGTGGCCACAGCTCGACATCGTGGAAGATCTTGCACGAGTCGAAGTTCATAAGGCTCAGCCAGAACCTAACCAACCATCAGTTCTATCAGCTAGTTCTAGTTCTTCACAGCCAGATATGGATAGCGACGAGCTGCCTCTGTCTTGTCAAGTGAACGATGTGTTGCAATGCGACGATCGGGTTGATGTCGGTTTGGACACTGATGTAGTTTCGGTGTCCGATCGTTTTGACGATTTCAGGGCTGATAAAGAAGCAAAATTGAAAGATTGGTTGGAAGGGTCTGGCAGCTTGAATGATATAAGAGATTTGAGCGCAGGGAAAGGGCATTAA

Protein sequence

MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTENAVPNVLNMKNSVANTSRESTLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGRVSTWRSATWGRSVAIAPRDDDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQPEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDVVSVSDRFDDFRADKEAKLKDWLEGSGSLNDIRDLSAGKGH

Homology

[Close]

BLAST of Carg04580 vs. NCBI nr
Match: KAG7032975.1 (hypothetical protein SDJN02_07026, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 530.4 bits (1365), Expect = 9.0e-147
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTENAVPNVLNMKNSVANTSRES 60
           MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTENAVPNVLNMKNSVANTSRES
Sbjct: 1   MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTENAVPNVLNMKNSVANTSRES 60

Query: 61  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR 120
           TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR
Sbjct: 61  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR 120

Query: 121 VSTWRSATWGRSVAIAPRDDDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQ 180
           VSTWRSATWGRSVAIAPRDDDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQ
Sbjct: 121 VSTWRSATWGRSVAIAPRDDDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQ 180

Query: 181 PEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDVVSVSDRFDDFR 240
           PEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDVVSVSDRFDDFR
Sbjct: 181 PEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDVVSVSDRFDDFR 240

Query: 241 ADKEAKLKDWLEGSGSLNDIRDLSAGKGH 270
           ADKEAKLKDWLEGSGSLNDIRDLSAGKGH
Sbjct: 241 ADKEAKLKDWLEGSGSLNDIRDLSAGKGH 269

[Close]

BLAST of Carg04580 vs. NCBI nr
Match: XP_022957432.1 (uncharacterized protein LOC111458823 isoform X2 [Cucurbita moschata])

HSP 1 Score: 526.6 bits (1355), Expect = 1.3e-145
Identity = 266/269 (98.88%), Postives = 268/269 (99.63%), Query Frame = 0


Query: 1   MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTENAVPNVLNMKNSVANTSRES 60
           MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHT+NAVPN+LNMKNSVANTSRES
Sbjct: 1   MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNILNMKNSVANTSRES 60

Query: 61  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR 120
           TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMS KQPRRGLIRSTYGMQPPGR
Sbjct: 61  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSAKQPRRGLIRSTYGMQPPGR 120

Query: 121 VSTWRSATWGRSVAIAPRDDDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQ 180
           VSTWRSATWGRSVAIAPRDDDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQ
Sbjct: 121 VSTWRSATWGRSVAIAPRDDDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQ 180

Query: 181 PEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDVVSVSDRFDDFR 240
           PEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDVVSVSDRFDDFR
Sbjct: 181 PEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDVVSVSDRFDDFR 240

Query: 241 ADKEAKLKDWLEGSGSLNDIRDLSAGKGH 270
           ADKEAKLKDWLEGSGSLNDIRDLSAGKGH
Sbjct: 241 ADKEAKLKDWLEGSGSLNDIRDLSAGKGH 269

[Close]

BLAST of Carg04580 vs. NCBI nr
Match: XP_022957415.1 (uncharacterized protein LOC111458823 isoform X1 [Cucurbita moschata] >XP_022957421.1 uncharacterized protein LOC111458823 isoform X1 [Cucurbita moschata])

HSP 1 Score: 526.6 bits (1355), Expect = 1.3e-145
Identity = 266/269 (98.88%), Postives = 268/269 (99.63%), Query Frame = 0


Query: 1   MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTENAVPNVLNMKNSVANTSRES 60
           MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHT+NAVPN+LNMKNSVANTSRES
Sbjct: 19  MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNILNMKNSVANTSRES 78

Query: 61  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR 120
           TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMS KQPRRGLIRSTYGMQPPGR
Sbjct: 79  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSAKQPRRGLIRSTYGMQPPGR 138

Query: 121 VSTWRSATWGRSVAIAPRDDDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQ 180
           VSTWRSATWGRSVAIAPRDDDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQ
Sbjct: 139 VSTWRSATWGRSVAIAPRDDDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQ 198

Query: 181 PEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDVVSVSDRFDDFR 240
           PEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDVVSVSDRFDDFR
Sbjct: 199 PEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDVVSVSDRFDDFR 258

Query: 241 ADKEAKLKDWLEGSGSLNDIRDLSAGKGH 270
           ADKEAKLKDWLEGSGSLNDIRDLSAGKGH
Sbjct: 259 ADKEAKLKDWLEGSGSLNDIRDLSAGKGH 287

[Close]

BLAST of Carg04580 vs. NCBI nr
Match: XP_023514944.1 (uncharacterized protein LOC111779103 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 525.0 bits (1351), Expect = 3.8e-145
Identity = 266/269 (98.88%), Postives = 268/269 (99.63%), Query Frame = 0


Query: 1   MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTENAVPNVLNMKNSVANTSRES 60
           MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHT+NAVPNVLNMKNSVANTSRES
Sbjct: 1   MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVLNMKNSVANTSRES 60

Query: 61  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR 120
           TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR
Sbjct: 61  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR 120

Query: 121 VSTWRSATWGRSVAIAPRDDDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQ 180
           VSTWRSATWGRSVAIAP DDDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQ
Sbjct: 121 VSTWRSATWGRSVAIAPGDDDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQ 180

Query: 181 PEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDVVSVSDRFDDFR 240
           PEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDV+SVSDRFDDFR
Sbjct: 181 PEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDVLSVSDRFDDFR 240

Query: 241 ADKEAKLKDWLEGSGSLNDIRDLSAGKGH 270
           ADKEAKLKDWLEGSGSLNDIRDLSAGKGH
Sbjct: 241 ADKEAKLKDWLEGSGSLNDIRDLSAGKGH 269

[Close]

BLAST of Carg04580 vs. NCBI nr
Match: KAG6602294.1 (hypothetical protein SDJN03_07527, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 523.5 bits (1347), Expect = 1.1e-144
Identity = 265/269 (98.51%), Postives = 268/269 (99.63%), Query Frame = 0


Query: 1   MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTENAVPNVLNMKNSVANTSRES 60
           MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHT+NAVPNVLNMKNSVANTSRES
Sbjct: 32  MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVLNMKNSVANTSRES 91

Query: 61  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR 120
           TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMS KQPRRGLIRSTYGMQPPGR
Sbjct: 92  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSAKQPRRGLIRSTYGMQPPGR 151

Query: 121 VSTWRSATWGRSVAIAPRDDDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQ 180
           VSTWRSATWGRSVAIAPRDDDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQ
Sbjct: 152 VSTWRSATWGRSVAIAPRDDDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQ 211

Query: 181 PEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDVVSVSDRFDDFR 240
           PEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDD+VDVGLDTDVVSVS+RFDDFR
Sbjct: 212 PEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDQVDVGLDTDVVSVSNRFDDFR 271

Query: 241 ADKEAKLKDWLEGSGSLNDIRDLSAGKGH 270
           ADKEAKLKDWLEGSGSLNDIRDLSAGKGH
Sbjct: 272 ADKEAKLKDWLEGSGSLNDIRDLSAGKGH 300

[Close]

BLAST of Carg04580 vs. ExPASy TrEMBL
Match: A0A6J1H0H0 (uncharacterized protein LOC111458823 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458823 PE=3 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 6.3e-146
Identity = 266/269 (98.88%), Postives = 268/269 (99.63%), Query Frame = 0


Query: 1   MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTENAVPNVLNMKNSVANTSRES 60
           MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHT+NAVPN+LNMKNSVANTSRES
Sbjct: 19  MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNILNMKNSVANTSRES 78

Query: 61  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR 120
           TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMS KQPRRGLIRSTYGMQPPGR
Sbjct: 79  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSAKQPRRGLIRSTYGMQPPGR 138

Query: 121 VSTWRSATWGRSVAIAPRDDDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQ 180
           VSTWRSATWGRSVAIAPRDDDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQ
Sbjct: 139 VSTWRSATWGRSVAIAPRDDDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQ 198

Query: 181 PEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDVVSVSDRFDDFR 240
           PEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDVVSVSDRFDDFR
Sbjct: 199 PEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDVVSVSDRFDDFR 258

Query: 241 ADKEAKLKDWLEGSGSLNDIRDLSAGKGH 270
           ADKEAKLKDWLEGSGSLNDIRDLSAGKGH
Sbjct: 259 ADKEAKLKDWLEGSGSLNDIRDLSAGKGH 287

[Close]

BLAST of Carg04580 vs. ExPASy TrEMBL
Match: A0A6J1GZ40 (uncharacterized protein LOC111458823 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111458823 PE=3 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 6.3e-146
Identity = 266/269 (98.88%), Postives = 268/269 (99.63%), Query Frame = 0


Query: 1   MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTENAVPNVLNMKNSVANTSRES 60
           MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHT+NAVPN+LNMKNSVANTSRES
Sbjct: 1   MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNILNMKNSVANTSRES 60

Query: 61  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR 120
           TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMS KQPRRGLIRSTYGMQPPGR
Sbjct: 61  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSAKQPRRGLIRSTYGMQPPGR 120

Query: 121 VSTWRSATWGRSVAIAPRDDDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQ 180
           VSTWRSATWGRSVAIAPRDDDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQ
Sbjct: 121 VSTWRSATWGRSVAIAPRDDDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQ 180

Query: 181 PEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDVVSVSDRFDDFR 240
           PEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDVVSVSDRFDDFR
Sbjct: 181 PEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDVVSVSDRFDDFR 240

Query: 241 ADKEAKLKDWLEGSGSLNDIRDLSAGKGH 270
           ADKEAKLKDWLEGSGSLNDIRDLSAGKGH
Sbjct: 241 ADKEAKLKDWLEGSGSLNDIRDLSAGKGH 269

[Close]

BLAST of Carg04580 vs. ExPASy TrEMBL
Match: A0A6J1GZ77 (uncharacterized protein LOC111458823 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111458823 PE=3 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 6.5e-135
Identity = 247/250 (98.80%), Postives = 249/250 (99.60%), Query Frame = 0


Query: 20  MIKYIANEPSTGLFYIQQHTENAVPNVLNMKNSVANTSRESTLHTEDSEDSITMLRSMKE 79
           MIKYIANEPSTGLFYIQQHT+NAVPN+LNMKNSVANTSRESTLHTEDSEDSITMLRSMKE
Sbjct: 1   MIKYIANEPSTGLFYIQQHTKNAVPNILNMKNSVANTSRESTLHTEDSEDSITMLRSMKE 60

Query: 80  CGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGRVSTWRSATWGRSVAIAPRD 139
           CGFPIADEMIRDIKKSLAVMS KQPRRGLIRSTYGMQPPGRVSTWRSATWGRSVAIAPRD
Sbjct: 61  CGFPIADEMIRDIKKSLAVMSAKQPRRGLIRSTYGMQPPGRVSTWRSATWGRSVAIAPRD 120

Query: 140 DDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQPEPNQPSVLSASSSSSQPD 199
           DDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQPEPNQPSVLSASSSSSQPD
Sbjct: 121 DDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQPEPNQPSVLSASSSSSQPD 180

Query: 200 MDSDELPLSCQVNDVLQCDDRVDVGLDTDVVSVSDRFDDFRADKEAKLKDWLEGSGSLND 259
           MDSDELPLSCQVNDVLQCDDRVDVGLDTDVVSVSDRFDDFRADKEAKLKDWLEGSGSLND
Sbjct: 181 MDSDELPLSCQVNDVLQCDDRVDVGLDTDVVSVSDRFDDFRADKEAKLKDWLEGSGSLND 240

Query: 260 IRDLSAGKGH 270
           IRDLSAGKGH
Sbjct: 241 IRDLSAGKGH 250

[Close]

BLAST of Carg04580 vs. ExPASy TrEMBL
Match: A0A6J1JS14 (uncharacterized protein LOC111487293 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487293 PE=3 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 7.5e-131
Identity = 242/257 (94.16%), Postives = 248/257 (96.50%), Query Frame = 0


Query: 1   MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTENAVPNVLNMKNSVANTSRES 60
           MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHT+N VPNVLNMKNSVANTSRES
Sbjct: 19  MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNGVPNVLNMKNSVANTSRES 78

Query: 61  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR 120
           TLHTEDSEDSITMLRSMKECGFPIADEM RDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR
Sbjct: 79  TLHTEDSEDSITMLRSMKECGFPIADEMSRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR 138

Query: 121 VSTWRSATWGRSVAIAPRDDDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQ 180
           VSTWRSATWGRS AIAPRDDDGG YISTVFK ARE  SNFKWPQLDIVEDLARVEVHKAQ
Sbjct: 139 VSTWRSATWGRSAAIAPRDDDGGAYISTVFKPAREMTSNFKWPQLDIVEDLARVEVHKAQ 198

Query: 181 PEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDVVSVSDRFDDFR 240
           P+PNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTD++SVS  FDDFR
Sbjct: 199 PQPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDLLSVS--FDDFR 258

Query: 241 ADKEAKLKDWLEGSGSL 258
           ADKEAKLKDWLEGSG++
Sbjct: 259 ADKEAKLKDWLEGSGNI 273

[Close]

BLAST of Carg04580 vs. ExPASy TrEMBL
Match: A0A6J1JQ35 (uncharacterized protein LOC111487293 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487293 PE=3 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 7.5e-131
Identity = 242/257 (94.16%), Postives = 248/257 (96.50%), Query Frame = 0


Query: 1   MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTENAVPNVLNMKNSVANTSRES 60
           MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHT+N VPNVLNMKNSVANTSRES
Sbjct: 1   MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNGVPNVLNMKNSVANTSRES 60

Query: 61  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR 120
           TLHTEDSEDSITMLRSMKECGFPIADEM RDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR
Sbjct: 61  TLHTEDSEDSITMLRSMKECGFPIADEMSRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR 120

Query: 121 VSTWRSATWGRSVAIAPRDDDGGGYISTVFKSARETASNFKWPQLDIVEDLARVEVHKAQ 180
           VSTWRSATWGRS AIAPRDDDGG YISTVFK ARE  SNFKWPQLDIVEDLARVEVHKAQ
Sbjct: 121 VSTWRSATWGRSAAIAPRDDDGGAYISTVFKPAREMTSNFKWPQLDIVEDLARVEVHKAQ 180

Query: 181 PEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDVVSVSDRFDDFR 240
           P+PNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTD++SVS  FDDFR
Sbjct: 181 PQPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDLLSVS--FDDFR 240

Query: 241 ADKEAKLKDWLEGSGSL 258
           ADKEAKLKDWLEGSG++
Sbjct: 241 ADKEAKLKDWLEGSGNI 255

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BLAST of Carg04580 vs. TAIR 10
Match: AT2G39170.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function NEP (InterPro:IPR019320); Has 57 Blast hits to 57 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 195.7 bits (496), Expect = 4.9e-50
Identity = 117/260 (45.00%), Postives = 153/260 (58.85%), Query Frame = 0


Query: 1   MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTENAVPNVLNMKNSVANTSRES 60
           M+ FSTVDGF EI ES AEMIKYIANEPS GL+YIQQH  NA PNV+N+ N+V   SRE+
Sbjct: 1   MHEFSTVDGFAEINESLAEMIKYIANEPSVGLYYIQQHIRNAAPNVINLNNNVLEKSRET 60

Query: 61  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR 120
            LHTED EDSI M++SMK+CG PIADEMI DIK SLA+MS+KQPRRG+I ++        
Sbjct: 61  GLHTEDLEDSIAMVKSMKDCGSPIADEMIGDIKNSLAIMSSKQPRRGVILNS-------- 120

Query: 121 VSTWRSATWGRSVAIAPR---------DDDGGGYISTVFKSARETASNFKWPQLDIVEDL 180
                ++ W RS +I  R         + +   Y ++VF +A+E ASN KWPQLD  E  
Sbjct: 121 -----TSPWSRSSSITTRTRGSDNSQDNSESSNYFTSVFMTAKEKASNIKWPQLDFKE-- 180

Query: 181 ARVEVHKAQPEPNQPSVLSASSSSSQPDMDSDELPLSCQVNDVLQCDDRVDVGLDTDVVS 240
                                 S + P++ S+E          L+ ++  D G    +V 
Sbjct: 181 --------------------QKSEADPNVQSNE----------LKEEEEEDSGKGEHIVE 214

Query: 241 VSDRFDDFRADKEAKLKDWL 252
            + +F++F+A KEA LK WL
Sbjct: 241 TT-KFEEFKAGKEASLKAWL 214

The following BLAST results are available for this feature:

BLAST of Carg04580 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032975.1	9.0e-147	100.00	hypothetical protein SDJN02_07026, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022957432.1	1.3e-145	98.88	uncharacterized protein LOC111458823 isoform X2 [Cucurbita moschata]	[more]
XP_022957415.1	1.3e-145	98.88	uncharacterized protein LOC111458823 isoform X1 [Cucurbita moschata] >XP_0229574...	[more]
XP_023514944.1	3.8e-145	98.88	uncharacterized protein LOC111779103 [Cucurbita pepo subsp. pepo]	[more]
KAG6602294.1	1.1e-144	98.51	hypothetical protein SDJN03_07527, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Carg04580 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg04580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H0H0	6.3e-146	98.88	uncharacterized protein LOC111458823 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GZ40	6.3e-146	98.88	uncharacterized protein LOC111458823 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GZ77	6.5e-135	98.80	uncharacterized protein LOC111458823 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JS14	7.5e-131	94.16	uncharacterized protein LOC111487293 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JQ35	7.5e-131	94.16	uncharacterized protein LOC111487293 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Carg04580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39170.1	4.9e-50	45.00	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function NEP (In...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019320	BLOC-1-related complex subunit 8	PFAM	PF10167	BORCS8	coord: 5..109 e-value: 1.5E-26 score: 92.5
IPR019320	BLOC-1-related complex subunit 8	PANTHER	PTHR21146	MEF2B PROTEIN	coord: 1..259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04580-RA	Carg04580-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005765	lysosomal membrane