Carg04508 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg04508
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein UPSTREAM OF FLC
Location	Carg_Chr04: 20096230 .. 20097108 (+)
RNA-Seq Expression	Carg04508
Synteny	Carg04508

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATCTCTAAGTAGTGTAGGACTTGGTTTGAGTGTGATTTTTGGGTGCCTTTTCTTGGCGCTTGTTGCTGAGCTTTACTACCTGTTATGGTGGAAGAAGAGGTTCACTGACAGAGAAGTTGAAACTGATTACAGTAGCCCAGCTAGAGAGCTATTTTACATGTTTTGTTGGAAAAGTTCATCTTCTTTAACCCGCACAGCTCTGAATCCTCAAGATCTAAGTTCATCAGTTAATATGCACACAAACAATGATTTCTTGCTGAAACCCTTTGGAGAAGATGGGATAGAAACAGAGTTTATGAGGCTCCAAAGCCTCTCAGGGCCACCAAGATTCCTCTTCACCATAATAGAAGAAACCAAGGAAGATTTAGAGTCTGAAGATAAGAATGGAAAGGAATCAAAAAGTAGAAGCTTGAGTGATCTGCTTCTTGCTGTGGAAACTCCATATTTGACTCCTTTAGCTTCTCCAACTCTTTTCACACCTCCTCTTACTCCTGCAGATTCTTATAAGCCCCATGGATTCAACCCTCTCTTTGAATCAGTATCAGATGCAGAGTTTAACAAGATAAGGTCATCTCCTCCTCCGAAGTTCAAATTCCTACAGGAAGCTGAGGAGAAACTCAAGAGGAAATTACAGGAAGAAGCTGAGAAATGTGTTCATAATAACACCATTGAACCTGTTGAAGATTCAAGAACTAAAGCAACCATGCAGAAGCTACTTCAAGATGAGGAGGATAAATCTTATATTACAATCGTCGTTGACAGAAACCAAGATTTGGAGCTGAATCAGTATCATTCAAGCAGTTCTTCACAGGTACTTCCTTTGCCATCTTCACCATCAAATTTCAGTTCATCCATCACCAAAAAGCCAATCTAA

mRNA sequence

ATGAAATCTCTAAGTAGTGTAGGACTTGGTTTGAGTGTGATTTTTGGGTGCCTTTTCTTGGCGCTTGTTGCTGAGCTTTACTACCTGTTATGGTGGAAGAAGAGGTTCACTGACAGAGAAGTTGAAACTGATTACAGTAGCCCAGCTAGAGAGCTATTTTACATGTTTTGTTGGAAAAGTTCATCTTCTTTAACCCGCACAGCTCTGAATCCTCAAGATCTAAGTTCATCAGTTAATATGCACACAAACAATGATTTCTTGCTGAAACCCTTTGGAGAAGATGGGATAGAAACAGAGTTTATGAGGCTCCAAAGCCTCTCAGGGCCACCAAGATTCCTCTTCACCATAATAGAAGAAACCAAGGAAGATTTAGAGTCTGAAGATAAGAATGGAAAGGAATCAAAAAGTAGAAGCTTGAGTGATCTGCTTCTTGCTGTGGAAACTCCATATTTGACTCCTTTAGCTTCTCCAACTCTTTTCACACCTCCTCTTACTCCTGCAGATTCTTATAAGCCCCATGGATTCAACCCTCTCTTTGAATCAGTATCAGATGCAGAGTTTAACAAGATAAGGTCATCTCCTCCTCCGAAGTTCAAATTCCTACAGGAAGCTGAGGAGAAACTCAAGAGGAAATTACAGGAAGAAGCTGAGAAATGTGTTCATAATAACACCATTGAACCTGTTGAAGATTCAAGAACTAAAGCAACCATGCAGAAGCTACTTCAAGATGAGGAGGATAAATCTTATATTACAATCGTCGTTGACAGAAACCAAGATTTGGAGCTGAATCAGTATCATTCAAGCAGTTCTTCACAGGTACTTCCTTTGCCATCTTCACCATCAAATTTCAGTTCATCCATCACCAAAAAGCCAATCTAA

Coding sequence (CDS)

ATGAAATCTCTAAGTAGTGTAGGACTTGGTTTGAGTGTGATTTTTGGGTGCCTTTTCTTGGCGCTTGTTGCTGAGCTTTACTACCTGTTATGGTGGAAGAAGAGGTTCACTGACAGAGAAGTTGAAACTGATTACAGTAGCCCAGCTAGAGAGCTATTTTACATGTTTTGTTGGAAAAGTTCATCTTCTTTAACCCGCACAGCTCTGAATCCTCAAGATCTAAGTTCATCAGTTAATATGCACACAAACAATGATTTCTTGCTGAAACCCTTTGGAGAAGATGGGATAGAAACAGAGTTTATGAGGCTCCAAAGCCTCTCAGGGCCACCAAGATTCCTCTTCACCATAATAGAAGAAACCAAGGAAGATTTAGAGTCTGAAGATAAGAATGGAAAGGAATCAAAAAGTAGAAGCTTGAGTGATCTGCTTCTTGCTGTGGAAACTCCATATTTGACTCCTTTAGCTTCTCCAACTCTTTTCACACCTCCTCTTACTCCTGCAGATTCTTATAAGCCCCATGGATTCAACCCTCTCTTTGAATCAGTATCAGATGCAGAGTTTAACAAGATAAGGTCATCTCCTCCTCCGAAGTTCAAATTCCTACAGGAAGCTGAGGAGAAACTCAAGAGGAAATTACAGGAAGAAGCTGAGAAATGTGTTCATAATAACACCATTGAACCTGTTGAAGATTCAAGAACTAAAGCAACCATGCAGAAGCTACTTCAAGATGAGGAGGATAAATCTTATATTACAATCGTCGTTGACAGAAACCAAGATTTGGAGCTGAATCAGTATCATTCAAGCAGTTCTTCACAGGTACTTCCTTTGCCATCTTCACCATCAAATTTCAGTTCATCCATCACCAAAAAGCCAATCTAA

Protein sequence

MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDREVETDYSSPARELFYMFCWKSSSSLTRTALNPQDLSSSVNMHTNNDFLLKPFGEDGIETEFMRLQSLSGPPRFLFTIIEETKEDLESEDKNGKESKSRSLSDLLLAVETPYLTPLASPTLFTPPLTPADSYKPHGFNPLFESVSDAEFNKIRSSPPPKFKFLQEAEEKLKRKLQEEAEKCVHNNTIEPVEDSRTKATMQKLLQDEEDKSYITIVVDRNQDLELNQYHSSSSSQVLPLPSSPSNFSSSITKKPI

Homology

[Close]

BLAST of Carg04508 vs. NCBI nr
Match: KAG6602366.1 (hypothetical protein SDJN03_07599, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033045.1 hypothetical protein SDJN02_07098, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 565.8 bits (1457), Expect = 2.1e-157
Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0


Query: 1   MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDREVETDYSSPARELFYMFCWKS 60
           MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDREVETDYSSPARELFYMFCWKS
Sbjct: 1   MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDREVETDYSSPARELFYMFCWKS 60

Query: 61  SSSLTRTALNPQDLSSSVNMHTNNDFLLKPFGEDGIETEFMRLQSLSGPPRFLFTIIEET 120
           SSSLTRTALNPQDLSSSVNMHTNNDFLLKPFGEDGIETEFMRLQSLSGPPRFLFTIIEET
Sbjct: 61  SSSLTRTALNPQDLSSSVNMHTNNDFLLKPFGEDGIETEFMRLQSLSGPPRFLFTIIEET 120

Query: 121 KEDLESEDKNGKESKSRSLSDLLLAVETPYLTPLASPTLFTPPLTPADSYKPHGFNPLFE 180
           KEDLESEDKNGKESKSRSLSDLLLAVETPYLTPLASPTLFTPPLTPADSYKPHGFNPLFE
Sbjct: 121 KEDLESEDKNGKESKSRSLSDLLLAVETPYLTPLASPTLFTPPLTPADSYKPHGFNPLFE 180

Query: 181 SVSDAEFNKIRSSPPPKFKFLQEAEEKLKRKLQEEAEKCVHNNTIEPVEDSRTKATMQKL 240
           SVSDAEFNKIRSSPPPKFKFLQEAEEKLKRKLQEEAEKCVHNNTIEPVEDSRTKATMQKL
Sbjct: 181 SVSDAEFNKIRSSPPPKFKFLQEAEEKLKRKLQEEAEKCVHNNTIEPVEDSRTKATMQKL 240

Query: 241 LQDEEDKSYITIVVDRNQDLELNQYHSSSSSQVLPLPSSPSNFSSSITKKPI 293
           LQDEEDKSYITIVVDRNQDLELNQYHSSSSSQVLPLPSSPSNFSSSITKKPI
Sbjct: 241 LQDEEDKSYITIVVDRNQDLELNQYHSSSSSQVLPLPSSPSNFSSSITKKPI 292

[Close]

BLAST of Carg04508 vs. NCBI nr
Match: XP_022964364.1 (uncharacterized protein LOC111464394 [Cucurbita moschata])

HSP 1 Score: 533.1 bits (1372), Expect = 1.5e-147
Identity = 273/274 (99.64%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDREVETDYSSPARELFYMFCWKS 60
           MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDREVETDYSSPARELFYMFCWKS
Sbjct: 1   MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDREVETDYSSPARELFYMFCWKS 60

Query: 61  SSSLTRTALNPQDLSSSVNMHTNNDFLLKPFGEDGIETEFMRLQSLSGPPRFLFTIIEET 120
           SSSLTRTALNPQDLSSSVNMHTNNDFLLKPFGEDGIETEFMRLQSLSGPPRFLFTIIEET
Sbjct: 61  SSSLTRTALNPQDLSSSVNMHTNNDFLLKPFGEDGIETEFMRLQSLSGPPRFLFTIIEET 120

Query: 121 KEDLESEDKNGKESKSRSLSDLLLAVETPYLTPLASPTLFTPPLTPADSYKPHGFNPLFE 180
           KEDLESEDKNGKESKSRSLSDLLLAVETPYLTPLASPTLFTPPLTPADSYKPHGFNPLFE
Sbjct: 121 KEDLESEDKNGKESKSRSLSDLLLAVETPYLTPLASPTLFTPPLTPADSYKPHGFNPLFE 180

Query: 181 SVSDAEFNKIRSSPPPKFKFLQEAEEKLKRKLQEEAEKCVHNNTIEPVEDSRTKATMQKL 240
           SVSDAEFNKIRSSPPPKFKFLQEAEEKLKRKLQEEAEKCVHNNTIEPVEDSRTKATMQKL
Sbjct: 181 SVSDAEFNKIRSSPPPKFKFLQEAEEKLKRKLQEEAEKCVHNNTIEPVEDSRTKATMQKL 240

Query: 241 LQDEEDKSYITIVVDRNQDLELNQYHSSSSSQVL 275
           LQDEEDKSYITIVVDRNQDLELNQYHSSSSSQ+L
Sbjct: 241 LQDEEDKSYITIVVDRNQDLELNQYHSSSSSQLL 274

[Close]

BLAST of Carg04508 vs. NCBI nr
Match: XP_023550428.1 (uncharacterized protein LOC111808574 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 533.1 bits (1372), Expect = 1.5e-147
Identity = 273/274 (99.64%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDREVETDYSSPARELFYMFCWKS 60
           MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDREVETDYSSPARELFYMFCWKS
Sbjct: 1   MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDREVETDYSSPARELFYMFCWKS 60

Query: 61  SSSLTRTALNPQDLSSSVNMHTNNDFLLKPFGEDGIETEFMRLQSLSGPPRFLFTIIEET 120
           SSSLTRTALNPQDLSSSVNMHTNNDFLLKPFGEDGIETEFMRLQSLSGPPRFLFTIIEET
Sbjct: 61  SSSLTRTALNPQDLSSSVNMHTNNDFLLKPFGEDGIETEFMRLQSLSGPPRFLFTIIEET 120

Query: 121 KEDLESEDKNGKESKSRSLSDLLLAVETPYLTPLASPTLFTPPLTPADSYKPHGFNPLFE 180
           KEDLESEDKNGKESKSRSLSDLLLAVETPYLTPLASPTLFTPPLTPADSYKPHGFNPLFE
Sbjct: 121 KEDLESEDKNGKESKSRSLSDLLLAVETPYLTPLASPTLFTPPLTPADSYKPHGFNPLFE 180

Query: 181 SVSDAEFNKIRSSPPPKFKFLQEAEEKLKRKLQEEAEKCVHNNTIEPVEDSRTKATMQKL 240
           SVSDAEFNKIRSSPPPKFKFLQEAEEKLKRKLQEEAEKCVHNNTIEPVEDSRTKATMQKL
Sbjct: 181 SVSDAEFNKIRSSPPPKFKFLQEAEEKLKRKLQEEAEKCVHNNTIEPVEDSRTKATMQKL 240

Query: 241 LQDEEDKSYITIVVDRNQDLELNQYHSSSSSQVL 275
           LQDEEDKSYITIVVDRNQDLELNQYHSSSSSQ+L
Sbjct: 241 LQDEEDKSYITIVVDRNQDLELNQYHSSSSSQLL 274

[Close]

BLAST of Carg04508 vs. NCBI nr
Match: XP_022990678.1 (uncharacterized protein LOC111487495 [Cucurbita maxima])

HSP 1 Score: 533.1 bits (1372), Expect = 1.5e-147
Identity = 273/274 (99.64%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDREVETDYSSPARELFYMFCWKS 60
           MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDREVETDYSSPARELFYMFCWKS
Sbjct: 1   MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDREVETDYSSPARELFYMFCWKS 60

Query: 61  SSSLTRTALNPQDLSSSVNMHTNNDFLLKPFGEDGIETEFMRLQSLSGPPRFLFTIIEET 120
           SSSLTRTALNPQDLSSSVNMHTNNDFLLKPFGEDGIETEFMRLQSLSGPPRFLFTIIEET
Sbjct: 61  SSSLTRTALNPQDLSSSVNMHTNNDFLLKPFGEDGIETEFMRLQSLSGPPRFLFTIIEET 120

Query: 121 KEDLESEDKNGKESKSRSLSDLLLAVETPYLTPLASPTLFTPPLTPADSYKPHGFNPLFE 180
           KEDLESEDKNGKESKSRSLSDLLLAVETPYLTPLASPTLFTPPLTPADSYKPHGFNPLFE
Sbjct: 121 KEDLESEDKNGKESKSRSLSDLLLAVETPYLTPLASPTLFTPPLTPADSYKPHGFNPLFE 180

Query: 181 SVSDAEFNKIRSSPPPKFKFLQEAEEKLKRKLQEEAEKCVHNNTIEPVEDSRTKATMQKL 240
           SVSDAEFNKIRSSPPPKFKFLQEAEEKLKRKLQEEAEKCVHNNTIEPVEDSRTKATMQKL
Sbjct: 181 SVSDAEFNKIRSSPPPKFKFLQEAEEKLKRKLQEEAEKCVHNNTIEPVEDSRTKATMQKL 240

Query: 241 LQDEEDKSYITIVVDRNQDLELNQYHSSSSSQVL 275
           LQDEEDKSYITIVVDRNQDLELNQYHSSSSSQ+L
Sbjct: 241 LQDEEDKSYITIVVDRNQDLELNQYHSSSSSQLL 274

[Close]

BLAST of Carg04508 vs. NCBI nr
Match: XP_038890711.1 (uncharacterized protein LOC120080207 [Benincasa hispida])

HSP 1 Score: 504.2 bits (1297), Expect = 7.5e-139
Identity = 272/320 (85.00%), Postives = 281/320 (87.81%), Query Frame = 0


Query: 1   MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDREVETDYSSPARELFYMFCWKS 60
           MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDR+VE DYSSPARELFYMFCWK 
Sbjct: 1   MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDRDVENDYSSPARELFYMFCWKR 60

Query: 61  SSSLTRTALNPQDLSSSV--------------NMHTNNDFLLKPFGEDGIETEFMRLQSL 120
           SSSL+ TALNPQDLSSSV              NMHTNNDFLLKPFGEDGIETEFMRLQSL
Sbjct: 61  SSSLSHTALNPQDLSSSVRFTETMIHGDEGQFNMHTNNDFLLKPFGEDGIETEFMRLQSL 120

Query: 121 SGPPRFLFTIIEETKEDLESE------DKNGKESKSRSLSDLLLAVETPYLTPLASPTLF 180
           SGP RFLFTIIEETKEDLESE      DKNGKESKSRSLSDLLL VETPYLTPLASPTLF
Sbjct: 121 SGPARFLFTIIEETKEDLESEDGKSRVDKNGKESKSRSLSDLLLTVETPYLTPLASPTLF 180

Query: 181 TPPLTPADSYKPHGFNPLFESVSDAEFNKIRSSPPPKFKFLQEAEEKLKRKLQEEAEKCV 240
           TPPLTPADSYKPHGFNPLFES SDAEFNK+RSSPPPKFKFLQEAEEKLKRKL E AEK V
Sbjct: 181 TPPLTPADSYKPHGFNPLFESASDAEFNKLRSSPPPKFKFLQEAEEKLKRKLLEAAEKGV 240

Query: 241 HNNTIEPVEDSRTKATMQKLLQDEEDKSYITIVVDRNQDLELN--------QYHSSSSSQ 293
           HNN+IE VEDSRTKA+M+KLL+DEEDKSYITIVVDRNQD+ELN        QYHSS+SSQ
Sbjct: 241 HNNSIESVEDSRTKASMEKLLKDEEDKSYITIVVDRNQDMELNHHHHQCTQQYHSSTSSQ 300

[Close]

BLAST of Carg04508 vs. ExPASy TrEMBL
Match: A0A6J1JTZ4 (uncharacterized protein LOC111487495 OS=Cucurbita maxima OX=3661 GN=LOC111487495 PE=4 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 7.3e-148
Identity = 273/274 (99.64%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDREVETDYSSPARELFYMFCWKS 60
           MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDREVETDYSSPARELFYMFCWKS
Sbjct: 1   MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDREVETDYSSPARELFYMFCWKS 60

Query: 61  SSSLTRTALNPQDLSSSVNMHTNNDFLLKPFGEDGIETEFMRLQSLSGPPRFLFTIIEET 120
           SSSLTRTALNPQDLSSSVNMHTNNDFLLKPFGEDGIETEFMRLQSLSGPPRFLFTIIEET
Sbjct: 61  SSSLTRTALNPQDLSSSVNMHTNNDFLLKPFGEDGIETEFMRLQSLSGPPRFLFTIIEET 120

Query: 121 KEDLESEDKNGKESKSRSLSDLLLAVETPYLTPLASPTLFTPPLTPADSYKPHGFNPLFE 180
           KEDLESEDKNGKESKSRSLSDLLLAVETPYLTPLASPTLFTPPLTPADSYKPHGFNPLFE
Sbjct: 121 KEDLESEDKNGKESKSRSLSDLLLAVETPYLTPLASPTLFTPPLTPADSYKPHGFNPLFE 180

Query: 181 SVSDAEFNKIRSSPPPKFKFLQEAEEKLKRKLQEEAEKCVHNNTIEPVEDSRTKATMQKL 240
           SVSDAEFNKIRSSPPPKFKFLQEAEEKLKRKLQEEAEKCVHNNTIEPVEDSRTKATMQKL
Sbjct: 181 SVSDAEFNKIRSSPPPKFKFLQEAEEKLKRKLQEEAEKCVHNNTIEPVEDSRTKATMQKL 240

Query: 241 LQDEEDKSYITIVVDRNQDLELNQYHSSSSSQVL 275
           LQDEEDKSYITIVVDRNQDLELNQYHSSSSSQ+L
Sbjct: 241 LQDEEDKSYITIVVDRNQDLELNQYHSSSSSQLL 274

[Close]

BLAST of Carg04508 vs. ExPASy TrEMBL
Match: A0A6J1HMX8 (uncharacterized protein LOC111464394 OS=Cucurbita moschata OX=3662 GN=LOC111464394 PE=4 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 7.3e-148
Identity = 273/274 (99.64%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDREVETDYSSPARELFYMFCWKS 60
           MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDREVETDYSSPARELFYMFCWKS
Sbjct: 1   MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDREVETDYSSPARELFYMFCWKS 60

Query: 61  SSSLTRTALNPQDLSSSVNMHTNNDFLLKPFGEDGIETEFMRLQSLSGPPRFLFTIIEET 120
           SSSLTRTALNPQDLSSSVNMHTNNDFLLKPFGEDGIETEFMRLQSLSGPPRFLFTIIEET
Sbjct: 61  SSSLTRTALNPQDLSSSVNMHTNNDFLLKPFGEDGIETEFMRLQSLSGPPRFLFTIIEET 120

Query: 121 KEDLESEDKNGKESKSRSLSDLLLAVETPYLTPLASPTLFTPPLTPADSYKPHGFNPLFE 180
           KEDLESEDKNGKESKSRSLSDLLLAVETPYLTPLASPTLFTPPLTPADSYKPHGFNPLFE
Sbjct: 121 KEDLESEDKNGKESKSRSLSDLLLAVETPYLTPLASPTLFTPPLTPADSYKPHGFNPLFE 180

Query: 181 SVSDAEFNKIRSSPPPKFKFLQEAEEKLKRKLQEEAEKCVHNNTIEPVEDSRTKATMQKL 240
           SVSDAEFNKIRSSPPPKFKFLQEAEEKLKRKLQEEAEKCVHNNTIEPVEDSRTKATMQKL
Sbjct: 181 SVSDAEFNKIRSSPPPKFKFLQEAEEKLKRKLQEEAEKCVHNNTIEPVEDSRTKATMQKL 240

Query: 241 LQDEEDKSYITIVVDRNQDLELNQYHSSSSSQVL 275
           LQDEEDKSYITIVVDRNQDLELNQYHSSSSSQ+L
Sbjct: 241 LQDEEDKSYITIVVDRNQDLELNQYHSSSSSQLL 274

[Close]

BLAST of Carg04508 vs. ExPASy TrEMBL
Match: A0A0A0KQW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G512960 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 3.5e-134
Identity = 268/323 (82.97%), Postives = 277/323 (85.76%), Query Frame = 0


Query: 1   MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDREVETDYSSPARELFYMFCWKS 60
           MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDR+VE DYSSPARELFYMFCWK 
Sbjct: 1   MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDRDVENDYSSPARELFYMFCWKR 60

Query: 61  SSSLTRTALNPQDLSSSV--------------NMHTNNDFLLKPFGEDGIETEFMRLQSL 120
           SSSL+ TALNPQDLSSSV              NMHTNNDFLLKPFGEDGIETEFMRLQSL
Sbjct: 61  SSSLSHTALNPQDLSSSVRFSETMIHGAEGQFNMHTNNDFLLKPFGEDGIETEFMRLQSL 120

Query: 121 SGPPRFLFTIIEETKEDLESE------DKNGKESKSRSLSDLLLAVETPYLTPLASPTLF 180
           SGPPRFLFTIIEETKEDLESE      DKNGKESKSRSLSDLLL VETPYLTPLASPTLF
Sbjct: 121 SGPPRFLFTIIEETKEDLESEDGKSKVDKNGKESKSRSLSDLLLTVETPYLTPLASPTLF 180

Query: 181 TPPLTPADSYKPHGFNPLFESVSDAEFNKIRSSPPPKFKFLQEAEEKLKRKLQEEAEKCV 240
           TPPLTPADSYKPHGFNPLFESVSDAEFNK+RSSPPPKFKFLQEAEEKLKRKL E AEK V
Sbjct: 181 TPPLTPADSYKPHGFNPLFESVSDAEFNKLRSSPPPKFKFLQEAEEKLKRKLLEAAEKGV 240

Query: 241 HNNTIEPVEDSRTKATMQKLLQDEED--KSYITIVVDRNQDLELN---------QYHSSS 293
           H+N  E VEDS TKA+ +KLL+DEED  KSYITIVVD NQD+ELN         QYHSS+
Sbjct: 241 HDNPKEFVEDSGTKASTEKLLKDEEDNEKSYITIVVDSNQDMELNHHYHQCTTQQYHSST 300

[Close]

BLAST of Carg04508 vs. ExPASy TrEMBL
Match: A0A1S3C8Y2 (uncharacterized protein LOC103498168 OS=Cucumis melo OX=3656 GN=LOC103498168 PE=4 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 1.9e-132
Identity = 265/323 (82.04%), Postives = 275/323 (85.14%), Query Frame = 0


Query: 1   MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDREVETDYSSPARELFYMFCWKS 60
           MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDR+VE DYSSPARELFYMFCWK 
Sbjct: 1   MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDRDVENDYSSPARELFYMFCWKR 60

Query: 61  SSSLTRTALNPQDLSSSV--------------NMHTNNDFLLKPFGEDGIETEFMRLQSL 120
           SSSL+ TALNPQDLSSSV              NMHTN+DFLLKPFGEDGIETEFMRLQSL
Sbjct: 61  SSSLSHTALNPQDLSSSVRFSETMIHGAEGQFNMHTNSDFLLKPFGEDGIETEFMRLQSL 120

Query: 121 SGPPRFLFTIIEETKEDLESE------DKNGKESKSRSLSDLLLAVETPYLTPLASPTLF 180
           SGPPRFLFTIIEETKEDLESE      DKNGKESKSRSLSDLLL VETPYLTPLASPTLF
Sbjct: 121 SGPPRFLFTIIEETKEDLESEDGKSKVDKNGKESKSRSLSDLLLTVETPYLTPLASPTLF 180

Query: 181 TPPLTPADSYKPHGFNPLFESVSDAEFNKIRSSPPPKFKFLQEAEEKLKRKLQEEAEKCV 240
           TPPLTPADSYKPHGFNPLFES SDAEFNK+RSSPPPKFKFLQEAEEKLKRKL E AEK V
Sbjct: 181 TPPLTPADSYKPHGFNPLFESASDAEFNKLRSSPPPKFKFLQEAEEKLKRKLLEAAEKGV 240

Query: 241 HNNTIEPVEDSRTKATMQKLLQDEE--DKSYITIVVDRNQDLELN---------QYHSSS 293
           H+N  E VEDS T A+ +KLL+DEE  DKSYITIVVD NQD+ELN         QYHSS+
Sbjct: 241 HDNPKEFVEDSGTTASTEKLLKDEEDYDKSYITIVVDSNQDMELNHHYHQCTTQQYHSST 300

[Close]

BLAST of Carg04508 vs. ExPASy TrEMBL
Match: A0A5D3DHD2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold334G00270 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 4.3e-132
Identity = 264/323 (81.73%), Postives = 275/323 (85.14%), Query Frame = 0


Query: 1   MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDREVETDYSSPARELFYMFCWKS 60
           MKSLSSVGLGLSVIFGCLFLAL+AELYYLLWWKKRFTDR+VE DYSSPARELFYMFCWK 
Sbjct: 1   MKSLSSVGLGLSVIFGCLFLALLAELYYLLWWKKRFTDRDVENDYSSPARELFYMFCWKR 60

Query: 61  SSSLTRTALNPQDLSSSV--------------NMHTNNDFLLKPFGEDGIETEFMRLQSL 120
           SSSL+ TALNPQDLSSSV              NMHTN+DFLLKPFGEDGIETEFMRLQSL
Sbjct: 61  SSSLSHTALNPQDLSSSVRFSETMIHGAEGQFNMHTNSDFLLKPFGEDGIETEFMRLQSL 120

Query: 121 SGPPRFLFTIIEETKEDLESE------DKNGKESKSRSLSDLLLAVETPYLTPLASPTLF 180
           SGPPRFLFTIIEETKEDLESE      DKNGKESKSRSLSDLLL VETPYLTPLASPTLF
Sbjct: 121 SGPPRFLFTIIEETKEDLESEDGKSKVDKNGKESKSRSLSDLLLTVETPYLTPLASPTLF 180

Query: 181 TPPLTPADSYKPHGFNPLFESVSDAEFNKIRSSPPPKFKFLQEAEEKLKRKLQEEAEKCV 240
           TPPLTPADSYKPHGFNPLFES SDAEFNK+RSSPPPKFKFLQEAEEKLKRKL E AEK V
Sbjct: 181 TPPLTPADSYKPHGFNPLFESASDAEFNKLRSSPPPKFKFLQEAEEKLKRKLLEAAEKGV 240

Query: 241 HNNTIEPVEDSRTKATMQKLLQDEE--DKSYITIVVDRNQDLELN---------QYHSSS 293
           H+N  E VEDS T A+ +KLL+DEE  DKSYITIVVD NQD+ELN         QYHSS+
Sbjct: 241 HDNPKEFVEDSGTTASTEKLLKDEEDYDKSYITIVVDSNQDMELNHHYHQCTTQQYHSST 300

[Close]

BLAST of Carg04508 vs. TAIR 10
Match: AT2G39560.1 (Putative membrane lipoprotein )

HSP 1 Score: 159.8 bits (403), Expect = 3.2e-39
Identity = 114/251 (45.42%), Postives = 151/251 (60.16%), Query Frame = 0


Query: 1   MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDR--EVETDYSSP-ARELFYMFC 60
           M+SLSSVGL LS++FGCL LAL+AELYYLLW KKR T R  +   DYS+P  REL ++FC
Sbjct: 1   MRSLSSVGLALSIVFGCLLLALLAELYYLLWCKKRSTTRRPDFRNDYSTPGTRELLFIFC 60

Query: 61  WKSSSSLTRTA------LNPQDLSSSVNMHTNNDFLLKPFGEDGIETEFMRLQSLSGP-- 120
             SS++ + ++       NP+ + +      NN F                 +++ GP  
Sbjct: 61  CSSSTNPSSSSPSSSSFSNPKPIDTQQQCPLNNGF-----------------ENVGGPGL 120

Query: 121 -PRFLFTIIEETKEDLESEDKNGKESKSRSLSDLLLAVET-----PYLTPLASPTLFTPP 180
            PRFLFTI+EET E++ESED     +K +SL+DL L +E+     PYLTP ASP+LFTPP
Sbjct: 121 VPRFLFTIMEETVEEMESEDV--VSTKGKSLNDLFLNMESGVITPPYLTPRASPSLFTPP 180

Query: 181 LTPADSYKPHG----FNPLFESVSDAEFNKI------------RSSPPPKFKFLQEAEEK 218
           LTP      +G     + LFES SDAEFN++             SSP  +FKFL++AEEK
Sbjct: 181 LTPLLMESCNGRKEEISSLFESSSDAEFNRLVRSSPLSSSHSPSSSPLSRFKFLRDAEEK 232

[Close]

BLAST of Carg04508 vs. TAIR 10
Match: AT5G59350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 156.4 bits (394), Expect = 3.6e-38
Identity = 109/239 (45.61%), Postives = 145/239 (60.67%), Query Frame = 0


Query: 1   MKSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKR---------FTDREVETDYSSPARE 60
           MK++S +G+GLS++FG L LALV E+YYLL  KK            ++E E   +  A+E
Sbjct: 1   MKTISGLGIGLSLMFGFLLLALVGEVYYLLRCKKHKKRVISQESEEEKEEEQQQNGYAKE 60

Query: 61  LFYMFCWKSSSSLTRTALNPQDLSSSVNMHTNNDF---LLKPF--GEDGIETEFMRLQSL 120
           L  +FC+K   SL +     ++   S+N   N D    L+K    G+ G E E M+L + 
Sbjct: 61  LIQLFCFKKPQSLQQNN-GGREGEVSMNEDGNPDLELGLMKHLNGGDLGFEAELMKLHN- 120

Query: 121 SGPPRFLFTIIEETKEDLESED----KNGKESKSRSLSDLLLAVETPYLTPLASPTLFTP 180
               RFLFTI+EETK DLESED    + G  S+ RSLSD+     TP  TPLASP   + 
Sbjct: 121 ---QRFLFTIMEETKADLESEDGGKSRLGSRSRRRSLSDVPNDCNTPGFTPLASPKKSSS 180

Query: 181 PLTPADSYKPHGFNPLFESVSDAEFNKI---RSSPPPKFKFLQEAEEKLKRKLQEEAEK 219
           PL   +SY  HGFNPLFES  + EFNK     SSPPPKFKF+++AEEKL+++L EEA++
Sbjct: 181 PL---ESYPHHGFNPLFESDGELEFNKFFRSSSSPPPKFKFMRDAEEKLRKRLIEEAKR 231

The following BLAST results are available for this feature:

BLAST of Carg04508 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6602366.1	2.1e-157	100.00	hypothetical protein SDJN03_07599, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022964364.1	1.5e-147	99.64	uncharacterized protein LOC111464394 [Cucurbita moschata]	[more]
XP_023550428.1	1.5e-147	99.64	uncharacterized protein LOC111808574 [Cucurbita pepo subsp. pepo]	[more]
XP_022990678.1	1.5e-147	99.64	uncharacterized protein LOC111487495 [Cucurbita maxima]	[more]
XP_038890711.1	7.5e-139	85.00	uncharacterized protein LOC120080207 [Benincasa hispida]	[more]

BLAST of Carg04508 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg04508 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JTZ4	7.3e-148	99.64	uncharacterized protein LOC111487495 OS=Cucurbita maxima OX=3661 GN=LOC111487495...	[more]
A0A6J1HMX8	7.3e-148	99.64	uncharacterized protein LOC111464394 OS=Cucurbita moschata OX=3662 GN=LOC1114643...	[more]
A0A0A0KQW1	3.5e-134	82.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G512960 PE=4 SV=1	[more]
A0A1S3C8Y2	1.9e-132	82.04	uncharacterized protein LOC103498168 OS=Cucumis melo OX=3656 GN=LOC103498168 PE=...	[more]
A0A5D3DHD2	4.3e-132	81.73	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Carg04508 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39560.1	3.2e-39	45.42	Putative membrane lipoprotein	[more]
AT5G59350.1	3.6e-38	45.61	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 198..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 263..292
None	No IPR available	PANTHER	PTHR34054:SF2	EXPRESSED PROTEIN	coord: 1..282
None	No IPR available	PANTHER	PTHR34054	EXPRESSED PROTEIN	coord: 1..282
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..17 score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04508-RA	Carg04508-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane