Carg04491 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg04491
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ribosomal RNA large subunit methyltransferase E-like
Location	Carg_Chr04: 20182467 .. 20184052 (+)
RNA-Seq Expression	Carg04491
Synteny	Carg04491

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCCTAGAGAAGGGGTTTAGATACAGATAGATTTTGGAGCTTTCCCAAGAATTAGGGGAAGAAAGAAATGAGTGGAGCCGGAGCACCCGATTTCTTCTACAGAGAAGCTCAACGTCTTGGCTATGTCGCAAGATCCGCCTTCAAGGTAAAAACCCTTCGTCTCACTGTTTTTCCGCCTCCTTAGAACCTTCAAGCTTCGCCAATCTTAATTAGATGTGTTTATCGACAGTTGCTTCAGATTCAGAAGCAATTCAAATTGATTACTTCAGGCTCCTCCGTTTTGGACCTTGGTTGTGCTCCCGGTGCCTGGCTTCAGGTCTCAATACTGCATCCTTCACATCCATTCCACAAATTTTGTGTCCTTTTGACTTCGCAAATATTTTCTTTTTGGGGTGAAATGTATTGATTATGCCATTTGAATTTAGGTAGCATGCCAGAGTCTGGGGCCTCTGAAAAATGGAGGCTCTGTCGTGGGTATTGATCTCAAGGTGAACTGTTTATCTTCTTCTGGGTTACTTAATTGTGATGTCAATCTGCTGAACTCATTTTTCAGCTAGTAGAAATGTATATAACAAGAAATGTGGGTCTTGCAGAACAGAAGGTAAAAGTTCCTCATGTGCATTGTGACTCAAGGGTTCAAACTGTTTGTGCTGATGTAATGAACCTTCCCAAAAACAAATTGAAGGCACTATCTCCTAAGGTAACTGGACATATAAAAGATCGGAAATTTCTTATAGTATTATTTATACCAATGTCATTAACATAGCTCAATTGGTTCACCGGTAATATTCCTGTACAAGCATGATCTCCTCTTTGAATGGCGTTATTAATATCACCCAATCACCTTCTCTATGTTTTTGCACAAACCATATTTGATAGCATTCAATGGAAGTGCAAGCTTTGTGCAATTGTATGGTTTAGGGGATATGATATTTGCTCTGTAGCTTAGAAAATTAAAGTTTGTTTAGAAAAACATAAACATATCACTCCTGTATGCGAGGAGTATGAATGTGGAGTGGCTGGGCAAGGAAAGTTTCCAAGTTGCAGAAAACAAGTCACACTGTCTAAATCTAAATCCTGTTTATTGCTTGGTTCTGTAGGAGAAAGGATTCTCTGTAATACTCTCCGATATGTGCCCCTTGGTTTCGGGAATCACCACTAGAGATGCAAGTTTATCAGTCGAATTAGGGATGCAGGCAGTTAATTTGGCTCTCGGAGAAGCTGCATTAAGTCATGGAGATGATGTTATGCATGGGAAGAACAAGGAGGACAATGTGGATGATTCAGCTTTAGTCTCAGATTACGATGGCGTGCTGCAAAAAGGAGGCCACCTCGTTATAAAACTTTTGGAGAGTGAAGATACCCAAGGTAGGATTTTATTTCCACATAAGAACACTATAGTTCGTTTGTAGATTATATTTGGTTTATCTTTACATTCTTTATCCCAGAATTCAGCCGGATGTTGAAGCCCCTCTTCAGAAAGGCATCTTGGTTGAGGCCTAAGGCTACTAGATCGTCATCCAGAGAGATTTATCTTATATGTCAAAGCTTGCAGGCAAAGACAAAATTTCAAAATTTGAGCTGA

mRNA sequence

AACCCTAGAGAAGGGGTTTAGATACAGATAGATTTTGGAGCTTTCCCAAGAATTAGGGGAAGAAAGAAATGAGTGGAGCCGGAGCACCCGATTTCTTCTACAGAGAAGCTCAACGTCTTGGCTATGTCGCAAGATCCGCCTTCAAGTTGCTTCAGATTCAGAAGCAATTCAAATTGATTACTTCAGGCTCCTCCGTTTTGGACCTTGGTTGTGCTCCCGGTGCCTGGCTTCAGGTAGCATGCCAGAGTCTGGGGCCTCTGAAAAATGGAGGCTCTGTCGTGGGTATTGATCTCAAGCTAGTAGAAATGTATATAACAAGAAATGTGGGTCTTGCAGAACAGAAGGTAAAAGTTCCTCATGTGCATTGTGACTCAAGGGTTCAAACTGTTTGTGCTGATGTAATGAACCTTCCCAAAAACAAATTGAAGGCACTATCTCCTAAGGAGAAAGGATTCTCTGTAATACTCTCCGATATGTGCCCCTTGGTTTCGGGAATCACCACTAGAGATGCAAGTTTATCAGTCGAATTAGGGATGCAGGCAGTTAATTTGGCTCTCGGAGAAGCTGCATTAAGTCATGGAGATGATGTTATGCATGGGAAGAACAAGGAGGACAATGTGGATGATTCAGCTTTAGTCTCAGATTACGATGGCGTGCTGCAAAAAGGAGGCCACCTCGTTATAAAACTTTTGGAGAGTGAAGATACCCAAGAATTCAGCCGGATGTTGAAGCCCCTCTTCAGAAAGGCATCTTGGTTGAGGCCTAAGGCTACTAGATCGTCATCCAGAGAGATTTATCTTATATGTCAAAGCTTGCAGGCAAAGACAAAATTTCAAAATTTGAGCTGA

Coding sequence (CDS)

ATGAGTGGAGCCGGAGCACCCGATTTCTTCTACAGAGAAGCTCAACGTCTTGGCTATGTCGCAAGATCCGCCTTCAAGTTGCTTCAGATTCAGAAGCAATTCAAATTGATTACTTCAGGCTCCTCCGTTTTGGACCTTGGTTGTGCTCCCGGTGCCTGGCTTCAGGTAGCATGCCAGAGTCTGGGGCCTCTGAAAAATGGAGGCTCTGTCGTGGGTATTGATCTCAAGCTAGTAGAAATGTATATAACAAGAAATGTGGGTCTTGCAGAACAGAAGGTAAAAGTTCCTCATGTGCATTGTGACTCAAGGGTTCAAACTGTTTGTGCTGATGTAATGAACCTTCCCAAAAACAAATTGAAGGCACTATCTCCTAAGGAGAAAGGATTCTCTGTAATACTCTCCGATATGTGCCCCTTGGTTTCGGGAATCACCACTAGAGATGCAAGTTTATCAGTCGAATTAGGGATGCAGGCAGTTAATTTGGCTCTCGGAGAAGCTGCATTAAGTCATGGAGATGATGTTATGCATGGGAAGAACAAGGAGGACAATGTGGATGATTCAGCTTTAGTCTCAGATTACGATGGCGTGCTGCAAAAAGGAGGCCACCTCGTTATAAAACTTTTGGAGAGTGAAGATACCCAAGAATTCAGCCGGATGTTGAAGCCCCTCTTCAGAAAGGCATCTTGGTTGAGGCCTAAGGCTACTAGATCGTCATCCAGAGAGATTTATCTTATATGTCAAAGCTTGCAGGCAAAGACAAAATTTCAAAATTTGAGCTGA

Protein sequence

MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLKNGGSVVGIDLKLVEMYITRNVGLAEQKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNKEDNVDDSALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAKTKFQNLS

Homology

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BLAST of Carg04491 vs. NCBI nr
Match: KAG7033062.1 (rlmE [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 508.8 bits (1309), Expect = 2.7e-140
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLKNGGSVVGIDLKLVEMYITRNVGLAEQKVKVPHVHCDSRVQTVCADVMNLPKNKLK 120
           LGPLKNGGSVVGIDLKLVEMYITRNVGLAEQKVKVPHVHCDSRVQTVCADVMNLPKNKLK
Sbjct: 61  LGPLKNGGSVVGIDLKLVEMYITRNVGLAEQKVKVPHVHCDSRVQTVCADVMNLPKNKLK 120

Query: 121 ALSPKEKGFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNK 180
           ALSPKEKGFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNK
Sbjct: 121 ALSPKEKGFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNK 180

Query: 181 EDNVDDSALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSR 240
           EDNVDDSALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSR
Sbjct: 181 EDNVDDSALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSR 240

Query: 241 EIYLICQSLQAKTKFQNLS 260
           EIYLICQSLQAKTKFQNLS
Sbjct: 241 EIYLICQSLQAKTKFQNLS 259

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BLAST of Carg04491 vs. NCBI nr
Match: XP_022960605.1 (uncharacterized protein LOC111461336 [Cucurbita moschata])

HSP 1 Score: 470.3 bits (1209), Expect = 1.1e-128
Identity = 244/259 (94.21%), Postives = 244/259 (94.21%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLKNGGSVVGIDLKLVEMYITRNVGLAEQKVKVPHVHCDSRVQTVCADVMNLPKNKLK 120
           LGPLKNGGSVVGIDLK               KVKVPHVHCDSRVQTVCADVMNLPKNKLK
Sbjct: 61  LGPLKNGGSVVGIDLK---------------KVKVPHVHCDSRVQTVCADVMNLPKNKLK 120

Query: 121 ALSPKEKGFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNK 180
           ALSPKEKGFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNK
Sbjct: 121 ALSPKEKGFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNK 180

Query: 181 EDNVDDSALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSR 240
           EDNVDDSALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSR
Sbjct: 181 EDNVDDSALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSR 240

Query: 241 EIYLICQSLQAKTKFQNLS 260
           EIYLICQSLQAKTKFQNLS
Sbjct: 241 EIYLICQSLQAKTKFQNLS 244

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BLAST of Carg04491 vs. NCBI nr
Match: KAG6602386.1 (hypothetical protein SDJN03_07619, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 466.1 bits (1198), Expect = 2.0e-127
Identity = 241/259 (93.05%), Postives = 243/259 (93.82%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLKNGGSVVGIDLKLVEMYITRNVGLAEQKVKVPHVHCDSRVQTVCADVMNLPKNKLK 120
           LGPLKNGGSVVGIDLK               KVKVPHVHCDSRVQTVCADVMNLPKNKLK
Sbjct: 61  LGPLKNGGSVVGIDLK---------------KVKVPHVHCDSRVQTVCADVMNLPKNKLK 120

Query: 121 ALSPKEKGFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNK 180
           ALSPKEKGFSVILSDMCP+VSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNK
Sbjct: 121 ALSPKEKGFSVILSDMCPMVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNK 180

Query: 181 EDNVDDSALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSR 240
           EDNVDDSA VSDYDG+LQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSR
Sbjct: 181 EDNVDDSASVSDYDGLLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSR 240

Query: 241 EIYLICQSLQAKTKFQNLS 260
           EIYLICQSLQAKTKFQNLS
Sbjct: 241 EIYLICQSLQAKTKFQNLS 244

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BLAST of Carg04491 vs. NCBI nr
Match: XP_023543349.1 (uncharacterized protein LOC111802921 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 454.5 bits (1168), Expect = 6.0e-124
Identity = 236/253 (93.28%), Postives = 236/253 (93.28%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLKNGGSVVGIDLKLVEMYITRNVGLAEQKVKVPHVHCDSRVQTVCADVMNLPKNKLK 120
           LGPLKNGGSVVGIDLK               KVKVPHVHCDSRVQTVCADVMNLPKNKLK
Sbjct: 61  LGPLKNGGSVVGIDLK---------------KVKVPHVHCDSRVQTVCADVMNLPKNKLK 120

Query: 121 ALSPKEKGFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNK 180
           ALSPKEKGFSVILSDMCP VSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNK
Sbjct: 121 ALSPKEKGFSVILSDMCPSVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNK 180

Query: 181 EDNVDDSALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSR 240
           EDNVDDSA VSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSR
Sbjct: 181 EDNVDDSASVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSR 238

Query: 241 EIYLICQSLQAKT 254
           EIYLICQSLQAKT
Sbjct: 241 EIYLICQSLQAKT 238

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BLAST of Carg04491 vs. NCBI nr
Match: XP_022990132.1 (uncharacterized protein LOC111487116 [Cucurbita maxima])

HSP 1 Score: 451.4 bits (1160), Expect = 5.1e-123
Identity = 236/254 (92.91%), Postives = 238/254 (93.70%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLKNGGSVVGIDLKLVEMYITRNVGLAEQKVKVPHVHCDSRVQTVCADVMNLPKNKLK 120
           LGPLKNGGSVVGIDLK               KVKVPHV+CDSRVQTVCADVMNLPKNKLK
Sbjct: 61  LGPLKNGGSVVGIDLK---------------KVKVPHVYCDSRVQTVCADVMNLPKNKLK 120

Query: 121 ALSPKEKGFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAA-LSHGDDVMHGKN 180
           ALSPKEKGFSVILSDMCPLVSGITTRDASLSVELGMQAVN+ALGEAA LSHGDDVMHGKN
Sbjct: 121 ALSPKEKGFSVILSDMCPLVSGITTRDASLSVELGMQAVNMALGEAALLSHGDDVMHGKN 180

Query: 181 KEDNVDDSALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSS 240
           KEDNVDDSALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSS
Sbjct: 181 KEDNVDDSALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSS 239

Query: 241 REIYLICQSLQAKT 254
           REIYLICQSLQAKT
Sbjct: 241 REIYLICQSLQAKT 239

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BLAST of Carg04491 vs. ExPASy Swiss-Prot
Match: A8ZT18 (Ribosomal RNA large subunit methyltransferase E OS=Desulfococcus oleovorans (strain DSM 6200 / JCM 39069 / Hxd3) OX=96561 GN=rlmE PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.4e-21
Identity = 75/251 (29.88%), Postives = 114/251 (45.42%), Query Frame = 0


Query: 3   GAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQSLG 62
           G   PD + R+A+   Y ARS +KL +IQK+  ++  G++VLDLGC PG+W+  A +++G
Sbjct: 8   GRKTPDHYARKAKTEHYPARSVYKLQEIQKKHNVLKPGNAVLDLGCFPGSWMMFAAETVG 67

Query: 63  PLKNGGSVVGIDLKLVEMYITRNVGLAEQKVKVPHVHCDSRVQTVCADVMNLPKNKLKAL 122
               GG V GIDLK V                    H  ++  ++  D+  + +   +AL
Sbjct: 68  ---RGGKVTGIDLKKVA------------------THMPAQATSLQEDIYEIDR---EAL 127

Query: 123 SPKEKGFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNKED 182
           +       V+LSDM P   G    DA+ S  L   A++LAL                   
Sbjct: 128 AGTLGPLDVVLSDMAPDTMGNKFTDAARSFHLAAAALDLAL------------------- 187

Query: 183 NVDDSALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREI 242
                        +L+ GGH V K+ + ED Q F  M+K  F +    +P+  R  S+E 
Sbjct: 188 ------------FLLKPGGHFVCKVFQGEDFQNFVNMVKAEFERHKVFKPETCRKDSKET 203

Query: 243 YLICQSLQAKT 254
           Y+I  S +  T
Sbjct: 248 YVIGFSKKEST 203

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BLAST of Carg04491 vs. ExPASy Swiss-Prot
Match: B8FL12 (Ribosomal RNA large subunit methyltransferase E OS=Desulfatibacillum aliphaticivorans OX=218208 GN=rlmE PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.5e-21
Identity = 77/238 (32.35%), Postives = 114/238 (47.90%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLKNG 67
           D +  +AQ+ G+ ARS FKL ++QK++K++  G  VLDLGCAPG+WL+ A Q +G   + 
Sbjct: 13  DHYTDKAQKAGFPARSVFKLEEMQKRWKILRPGQKVLDLGCAPGSWLKYASQIVG---DS 72

Query: 68  GSVVGIDLKLVEMYITRNVGLAEQKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEK 127
           G V+G+DLK ++     N                   Q +  D   L +  L  +    +
Sbjct: 73  GRVIGLDLKPMDQPDKPN------------------AQFIQGDAFELTQEFLDEIG---R 132

Query: 128 GFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNKEDNVDDS 187
            F V+LSDM P  +GI   DA  S          AL E+AL                  +
Sbjct: 133 DFDVVLSDMAPNTTGIKNVDALKSA---------ALCESAL------------------A 192

Query: 188 ALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLI 246
           A V+    VL+ GG  V K+ + E    F + +K  F K    +P++TR  SREIY++
Sbjct: 193 AAVT----VLKPGGSFVCKIFQGEGFDAFIKDVKKYFTKHKIFKPESTRKQSREIYVV 195

[Close]

BLAST of Carg04491 vs. ExPASy Swiss-Prot
Match: B9LSX2 (Ribosomal RNA large subunit methyltransferase E OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) OX=416348 GN=rlmE PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.8e-20
Identity = 70/242 (28.93%), Postives = 111/242 (45.87%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLKNG 67
           D +Y ++++ GY ARSA+KL QI ++  L   G +V+DLG APG WLQVA + +G     
Sbjct: 5   DEYYNKSKQQGYRARSAYKLKQIDEEANLFERGDTVVDLGAAPGGWLQVAAEEVG---ES 64

Query: 68  GSVVGIDLKLVEMYITRNVGLAEQKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEK 127
           G+VVG+DL+ ++                     D  V+T+  D+           +  E+
Sbjct: 65  GTVVGVDLQRIDDL------------------DDHDVETIRGDMTEERTRHYLREAIGER 124

Query: 128 GFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNKEDNVDDS 187
           G  V++SDM P ++G    D + SV L  QA ++A                         
Sbjct: 125 GADVVISDMAPNMTGEYALDHARSVHLARQAFDVA------------------------- 184

Query: 188 ALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQ 247
                 + +L  GG  V+K+ + ED   F   ++  F     + P A+R SS E+YL+ +
Sbjct: 185 ------EELLAPGGDFVVKVFQGEDLDAFREDVRAEFEYLRTVSPPASRDSSSEVYLVAK 194

Query: 248 SL 250
            L
Sbjct: 245 GL 194

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BLAST of Carg04491 vs. ExPASy Swiss-Prot
Match: A6UUK5 (Ribosomal RNA large subunit methyltransferase E OS=Methanococcus aeolicus (strain ATCC BAA-1280 / DSM 17508 / OCM 812 / Nankai-3) OX=419665 GN=rlmE PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 8.4e-20
Identity = 68/245 (27.76%), Postives = 122/245 (49.80%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLKNG 67
           DF+Y+ A++  Y +R+++KLLQ+ ++F++I  G +V+DLGCAPG WLQ +   +G     
Sbjct: 15  DFYYKLAKQNHYRSRASYKLLQLNEKFEIIYEGDNVVDLGCAPGGWLQASYDLVG---ED 74

Query: 68  GSVVGIDLKLVEMYITRNVGLAEQKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEK 127
           G V+G+DL+ V+     N+   +  +        ++ +T+         NK+  L P + 
Sbjct: 75  GFVIGVDLQKVKPLREENIVAIQGDM--------TKKETI---------NKIIDLMPSKA 134

Query: 128 GFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNKEDNVDDS 187
              V++ D  P +SG+   D S S+EL + A+       A +H                 
Sbjct: 135 --DVVICDASPNISGVWEVDHSRSIELSLMAL------IATTH----------------- 194

Query: 188 ALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQ 247
                   +L+K G+ V+K+ +     ++ ++L   F+K    +PKA+RS S E+Y+I +
Sbjct: 195 --------LLRKNGNFVVKVFQGSLFDQYVQLLTKYFKKVQTTKPKASRSVSAEVYVIGK 206

Query: 248 SLQAK 253
               K
Sbjct: 255 KFLGK 206

[Close]

BLAST of Carg04491 vs. ExPASy Swiss-Prot
Match: A0LGZ0 (Ribosomal RNA large subunit methyltransferase E OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) OX=335543 GN=rlmE PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.1e-19
Identity = 74/246 (30.08%), Postives = 115/246 (46.75%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLKNG 67
           D ++ +A++  Y+AR+ +KL +IQ ++K++  G+ VLDLG APG+W+Q A + +GP    
Sbjct: 7   DHYFHKAKKEHYLARAVYKLQEIQDRYKILKPGNRVLDLGAAPGSWMQFAREIVGP---S 66

Query: 68  GSVVGIDLKLVEMYITRNVGLAEQKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEK 127
           G VVG+DLK VE      V + +  V  P +                     ++LS +  
Sbjct: 67  GLVVGVDLKGVEHRFPEGVVVLQGDVTDPEL--------------------ARSLSVEHG 126

Query: 128 GFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNKEDNVDDS 187
            F V+LSDM P  SGI   D++ S  L   A+ +A                         
Sbjct: 127 PFDVVLSDMAPSTSGIRVADSARSALLFESALEMA------------------------- 186

Query: 188 ALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWL---RPKATRSSSREIYL 247
                    L+ GGH V KL +     EF  +L+ + R   W+   +P A+R  S+EIY+
Sbjct: 187 ------RSALRPGGHFVAKLFQG---AEFHVLLQAVKRDFEWVKVTKPDASRKQSKEIYV 195

Query: 248 ICQSLQ 251
           I   L+
Sbjct: 247 IGMRLR 195

[Close]

BLAST of Carg04491 vs. ExPASy TrEMBL
Match: A0A6J1H9J8 (uncharacterized protein LOC111461336 OS=Cucurbita moschata OX=3662 GN=LOC111461336 PE=3 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 5.1e-129
Identity = 244/259 (94.21%), Postives = 244/259 (94.21%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLKNGGSVVGIDLKLVEMYITRNVGLAEQKVKVPHVHCDSRVQTVCADVMNLPKNKLK 120
           LGPLKNGGSVVGIDLK               KVKVPHVHCDSRVQTVCADVMNLPKNKLK
Sbjct: 61  LGPLKNGGSVVGIDLK---------------KVKVPHVHCDSRVQTVCADVMNLPKNKLK 120

Query: 121 ALSPKEKGFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNK 180
           ALSPKEKGFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNK
Sbjct: 121 ALSPKEKGFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNK 180

Query: 181 EDNVDDSALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSR 240
           EDNVDDSALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSR
Sbjct: 181 EDNVDDSALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSR 240

Query: 241 EIYLICQSLQAKTKFQNLS 260
           EIYLICQSLQAKTKFQNLS
Sbjct: 241 EIYLICQSLQAKTKFQNLS 244

[Close]

BLAST of Carg04491 vs. ExPASy TrEMBL
Match: A0A6J1JHT1 (uncharacterized protein LOC111487116 OS=Cucurbita maxima OX=3661 GN=LOC111487116 PE=3 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 2.5e-123
Identity = 236/254 (92.91%), Postives = 238/254 (93.70%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLKNGGSVVGIDLKLVEMYITRNVGLAEQKVKVPHVHCDSRVQTVCADVMNLPKNKLK 120
           LGPLKNGGSVVGIDLK               KVKVPHV+CDSRVQTVCADVMNLPKNKLK
Sbjct: 61  LGPLKNGGSVVGIDLK---------------KVKVPHVYCDSRVQTVCADVMNLPKNKLK 120

Query: 121 ALSPKEKGFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAA-LSHGDDVMHGKN 180
           ALSPKEKGFSVILSDMCPLVSGITTRDASLSVELGMQAVN+ALGEAA LSHGDDVMHGKN
Sbjct: 121 ALSPKEKGFSVILSDMCPLVSGITTRDASLSVELGMQAVNMALGEAALLSHGDDVMHGKN 180

Query: 181 KEDNVDDSALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSS 240
           KEDNVDDSALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSS
Sbjct: 181 KEDNVDDSALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSS 239

Query: 241 REIYLICQSLQAKT 254
           REIYLICQSLQAKT
Sbjct: 241 REIYLICQSLQAKT 239

[Close]

BLAST of Carg04491 vs. ExPASy TrEMBL
Match: A0A6J1BWZ2 (uncharacterized protein LOC111006421 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006421 PE=3 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.5e-112
Identity = 216/252 (85.71%), Postives = 226/252 (89.68%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAG PDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGTPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLKNGGSVVGIDLKLVEMYITRNVGLAEQKVKVPHVHCDSRVQTVCADVMNLPKNKLK 120
           LGPLKNGGSV+GIDLK               KVKVPHVHCDSRVQTV ADVMNLP+NKLK
Sbjct: 61  LGPLKNGGSVLGIDLK---------------KVKVPHVHCDSRVQTVSADVMNLPRNKLK 120

Query: 121 ALSPKEKGFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNK 180
           ALSPKE+GFSVILSDMCP VSGITTRDA+LSVELGMQAVNLA+GEAAL  GDDVMHGK  
Sbjct: 121 ALSPKERGFSVILSDMCPSVSGITTRDATLSVELGMQAVNLAIGEAALGSGDDVMHGK-- 180

Query: 181 EDNVDDSALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSR 240
            D+VDDS  V DYDG+LQ+GGHLV+KLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSR
Sbjct: 181 -DSVDDSTSVVDYDGLLQRGGHLVVKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSR 234

Query: 241 EIYLICQSLQAK 253
           EIYLICQSLQA+
Sbjct: 241 EIYLICQSLQAR 234

[Close]

BLAST of Carg04491 vs. ExPASy TrEMBL
Match: A0A6J1BWX0 (uncharacterized protein LOC111006421 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006421 PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.6e-109
Identity = 213/252 (84.52%), Postives = 223/252 (88.49%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAG PDFFYREAQRLGYVARSAFK   IQKQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGTPDFFYREAQRLGYVARSAFK---IQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLKNGGSVVGIDLKLVEMYITRNVGLAEQKVKVPHVHCDSRVQTVCADVMNLPKNKLK 120
           LGPLKNGGSV+GIDLK               KVKVPHVHCDSRVQTV ADVMNLP+NKLK
Sbjct: 61  LGPLKNGGSVLGIDLK---------------KVKVPHVHCDSRVQTVSADVMNLPRNKLK 120

Query: 121 ALSPKEKGFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNK 180
           ALSPKE+GFSVILSDMCP VSGITTRDA+LSVELGMQAVNLA+GEAAL  GDDVMHGK  
Sbjct: 121 ALSPKERGFSVILSDMCPSVSGITTRDATLSVELGMQAVNLAIGEAALGSGDDVMHGK-- 180

Query: 181 EDNVDDSALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSR 240
            D+VDDS  V DYDG+LQ+GGHLV+KLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSR
Sbjct: 181 -DSVDDSTSVVDYDGLLQRGGHLVVKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSR 231

Query: 241 EIYLICQSLQAK 253
           EIYLICQSLQA+
Sbjct: 241 EIYLICQSLQAR 231

[Close]

BLAST of Carg04491 vs. ExPASy TrEMBL
Match: A0A1S3C9F1 (ribosomal RNA large subunit methyltransferase E isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498139 PE=3 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 1.0e-108
Identity = 210/254 (82.68%), Postives = 227/254 (89.37%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQ QFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLKNGGSVVGIDLKLVEMYITRNVGLAEQKVKVPHVHCDSRVQTVCADVMNLPKNKLK 120
           LGP +NGGSV+GID+K               KVKVPHVHCDSRVQTVCADVMNLPK+KLK
Sbjct: 61  LGPPRNGGSVLGIDIK---------------KVKVPHVHCDSRVQTVCADVMNLPKSKLK 120

Query: 121 ALSPKEKGFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNK 180
           +LSPKEKGFSVILSDMCP+VSGITTRDA+LSVELGMQAVNLALGEAAL  G +V+HGK+K
Sbjct: 121 SLSPKEKGFSVILSDMCPIVSGITTRDAALSVELGMQAVNLALGEAALGVG-EVIHGKDK 180

Query: 181 EDNVDDSALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSR 240
            D++DDS   SD DGVL+KGGHLV+KLLESEDTQEFSRMLKPLFRK+SWLRPKATRSSSR
Sbjct: 181 -DSIDDSTSASDCDGVLRKGGHLVLKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSR 237

Query: 241 EIYLICQSLQAKTK 255
           EIYLICQSLQ + +
Sbjct: 241 EIYLICQSLQLQAR 237

[Close]

BLAST of Carg04491 vs. TAIR 10
Match: AT5G13830.1 (FtsJ-like methyltransferase family protein )

HSP 1 Score: 312.0 bits (798), Expect = 4.5e-85
Identity = 166/250 (66.40%), Postives = 192/250 (76.80%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAG PDFFYREAQRLGYVARSAFKLLQIQKQ+KLI  GSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGVPDFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLKNGGSVVGIDLKLVEMYITRNVGLAEQKVKVPHVHCDSRVQTVCADVMNLPKNKLK 120
           LGPL++GG VVG+D+K               KVKVP   CDSRVQT+ ADV+N P+ K++
Sbjct: 61  LGPLRSGGIVVGMDIK---------------KVKVP-PQCDSRVQTIAADVLNFPRQKIR 120

Query: 121 ALSPKEKGFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNK 180
            LSP++ GFSVILSDMC  VSGITTRDA+LS ELGM+A++LA+G+AA+S          +
Sbjct: 121 ELSPQQLGFSVILSDMCHSVSGITTRDAALSAELGMRALDLAVGQAAIS----------Q 180

Query: 181 EDNVDDSALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSR 240
             N DD        GVL+ GGHLVIKLLESED Q+F+R+ KP+F KASWLRPKATR SSR
Sbjct: 181 SPNDDDGGPNESRPGVLRHGGHLVIKLLESEDAQDFARICKPIFNKASWLRPKATRPSSR 224

Query: 241 EIYLICQSLQ 251
           EIYLICQ  +
Sbjct: 241 EIYLICQGFR 224

[Close]

BLAST of Carg04491 vs. TAIR 10
Match: AT4G25730.1 (FtsJ-like methyltransferase family protein )

HSP 1 Score: 76.6 bits (187), Expect = 3.2e-14
Identity = 67/238 (28.15%), Postives = 107/238 (44.96%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLKNG 67
           D +YR A+  G+ +R+++KLLQ+  ++ L+ S  +VLDL  APG W+QVA + + P+  G
Sbjct: 11  DKYYRLAKERGFRSRASYKLLQLDAKYSLLHSAHAVLDLCAAPGGWMQVAVEKV-PV--G 70

Query: 68  GSVVGIDLKLVEMYITRNVGLAEQKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEK 127
             V+GID  LV +   R  G       +    C S+++ V      + ++ + A      
Sbjct: 71  SLVLGID--LVPILPVR--GCVTMTQDITRTECKSKIKQV------MEQHGVSA------ 130

Query: 128 GFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNKEDNVDDS 187
            F+++L D  P V G   ++A     L + +V LA                         
Sbjct: 131 -FNLVLHDGSPNVGGAWAQEAMSQNALVIDSVRLA------------------------- 190

Query: 188 ALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLI 246
                    L + G+LV K+  S D       L  LF K    +P A+RS+S E YL+
Sbjct: 191 ------TEFLARNGNLVTKVFRSRDYNSVLYCLGRLFEKVEVFKPPASRSASAETYLV 197

[Close]

BLAST of Carg04491 vs. TAIR 10
Match: AT5G01230.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 3.5e-13
Identity = 62/242 (25.62%), Postives = 109/242 (45.04%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQSLG-PLKN 67
           D +YR+A+  G+ ARSAFKLLQI ++F +      V+DL  APG+W QV  + L  P K+
Sbjct: 10  DIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRQLYLPAKS 69

Query: 68  GGSVVGIDLKLVEMYITRNVGLAEQKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKE 127
                  DL L+     + +   E  ++V     ++R     A+V+    +  KA     
Sbjct: 70  SAESKDGDLPLIVAIDLQPMAPIEGVIQVQGDITNART----AEVVIRHFDGCKA----- 129

Query: 128 KGFSVILSDMCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNKEDNVDD 187
               +++ D  P V+G+   D  +  +L      +  G   ++H                
Sbjct: 130 ---DLVVCDGAPDVTGLHDMDEFVQSQL------ILAGLTIVTH---------------- 189

Query: 188 SALVSDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLIC 247
                    +L++GG  + K+   +DT      LK  F   ++ +PK++R+SS E + +C
Sbjct: 190 ---------ILKEGGKFIAKIFRGKDTSLLYCQLKLFFPTVTFAKPKSSRNSSIEAFAVC 208

Query: 248 QS 249
           ++
Sbjct: 250 EN 208

[Close]

BLAST of Carg04491 vs. TAIR 10
Match: AT5G01230.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 52.4 bits (124), Expect = 6.4e-07
Identity = 24/48 (50.00%), Postives = 33/48 (68.75%), Query Frame = 0


Query: 8  DFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQ 56
          D +YR+A+  G+ ARSAFKLLQI ++F +      V+DL  APG+W Q
Sbjct: 10 DIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQ 57

The following BLAST results are available for this feature:

BLAST of Carg04491 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033062.1	2.7e-140	100.00	rlmE [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022960605.1	1.1e-128	94.21	uncharacterized protein LOC111461336 [Cucurbita moschata]	[more]
KAG6602386.1	2.0e-127	93.05	hypothetical protein SDJN03_07619, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023543349.1	6.0e-124	93.28	uncharacterized protein LOC111802921 [Cucurbita pepo subsp. pepo]	[more]
XP_022990132.1	5.1e-123	92.91	uncharacterized protein LOC111487116 [Cucurbita maxima]	[more]

BLAST of Carg04491 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8ZT18	3.4e-21	29.88	Ribosomal RNA large subunit methyltransferase E OS=Desulfococcus oleovorans (str...	[more]
B8FL12	4.5e-21	32.35	Ribosomal RNA large subunit methyltransferase E OS=Desulfatibacillum aliphaticiv...	[more]
B9LSX2	3.8e-20	28.93	Ribosomal RNA large subunit methyltransferase E OS=Halorubrum lacusprofundi (str...	[more]
A6UUK5	8.4e-20	27.76	Ribosomal RNA large subunit methyltransferase E OS=Methanococcus aeolicus (strai...	[more]
A0LGZ0	1.1e-19	30.08	Ribosomal RNA large subunit methyltransferase E OS=Syntrophobacter fumaroxidans ...	[more]

BLAST of Carg04491 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H9J8	5.1e-129	94.21	uncharacterized protein LOC111461336 OS=Cucurbita moschata OX=3662 GN=LOC1114613...	[more]
A0A6J1JHT1	2.5e-123	92.91	uncharacterized protein LOC111487116 OS=Cucurbita maxima OX=3661 GN=LOC111487116...	[more]
A0A6J1BWZ2	1.5e-112	85.71	uncharacterized protein LOC111006421 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1BWX0	1.6e-109	84.52	uncharacterized protein LOC111006421 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A1S3C9F1	1.0e-108	82.68	ribosomal RNA large subunit methyltransferase E isoform X3 OS=Cucumis melo OX=36...	[more]

BLAST of Carg04491 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13830.1	4.5e-85	66.40	FtsJ-like methyltransferase family protein	[more]
AT4G25730.1	3.2e-14	28.15	FtsJ-like methyltransferase family protein	[more]
AT5G01230.1	3.5e-13	25.62	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]
AT5G01230.2	6.4e-07	50.00	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002877	Ribosomal RNA methyltransferase FtsJ domain	PFAM	PF01728	FtsJ	coord: 19..247 e-value: 5.1E-43 score: 147.2
IPR015507	Ribosomal RNA large subunit methyltransferase E	PIRSF	PIRSF005461	23S_rRNA_mtase	coord: 4..258 e-value: 1.8E-44 score: 149.7
IPR015507	Ribosomal RNA large subunit methyltransferase E	HAMAP	MF_01547	RNA_methyltr_E	coord: 3..250 score: 28.040081
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 15..257 e-value: 2.0E-50 score: 173.1
None	No IPR available	PANTHER	PTHR10920	RIBOSOMAL RNA METHYLTRANSFERASE	coord: 5..250
None	No IPR available	PANTHER	PTHR10920:SF18	RRNA METHYLTRANSFERASE 2, MITOCHONDRIAL	coord: 5..250
None	No IPR available	CDD	cd02440	AdoMet_MTases	coord: 43..137 e-value: 0.00997384 score: 33.1723
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 18..248

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04491-RA	Carg04491-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031167	rRNA methylation
biological_process	GO:0032259	methylation
biological_process	GO:0001510	RNA methylation
molecular_function	GO:0008650	rRNA (uridine-2'-O-)-methyltransferase activity
molecular_function	GO:0008168	methyltransferase activity