Carg04487 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCTCTGGTCGGTGCTTCTGCAACTGCTTCGAATCCTACTGCCAACGATCCCCCTTTTTACTTCGACGAGAAATGGAGGCTGTCCAAGAAAGAAGGCTTAACCAGAACCCGCTCCTCCTCTTTCCCTCTCGTAAAAAACTCCTCTCTTAGAAGGTGTTCTTTCACTAGAAAGTGTGCCAGATTGGTCAAAGAACAGAGGGCTCGATTCTACATCATGAGACGATGCGTCACCATGCTCATCTGCTGGCACGATTACACCGATTCTTGA ATGGCTGCTCTGGTCGGTGCTTCTGCAACTGCTTCGAATCCTACTGCCAACGATCCCCCTTTTTACTTCGACGAGAAATGGAGGCTGTCCAAGAAAGAAGGCTTAACCAGAACCCGCTCCTCCTCTTTCCCTCTCGTAAAAAACTCCTCTCTTAGAAGGTGTTCTTTCACTAGAAAGTGTGCCAGATTGGTCAAAGAACAGAGGGCTCGATTCTACATCATGAGACGATGCGTCACCATGCTCATCTGCTGGCACGATTACACCGATTCTTGA ATGGCTGCTCTGGTCGGTGCTTCTGCAACTGCTTCGAATCCTACTGCCAACGATCCCCCTTTTTACTTCGACGAGAAATGGAGGCTGTCCAAGAAAGAAGGCTTAACCAGAACCCGCTCCTCCTCTTTCCCTCTCGTAAAAAACTCCTCTCTTAGAAGGTGTTCTTTCACTAGAAAGTGTGCCAGATTGGTCAAAGAACAGAGGGCTCGATTCTACATCATGAGACGATGCGTCACCATGCTCATCTGCTGGCACGATTACACCGATTCTTGA MAALVGASATASNPTANDPPFYFDEKWRLSKKEGLTRTRSSSFPLVKNSSLRRCSFTRKCARLVKEQRARFYIMRRCVTMLICWHDYTDS Homology
BLAST of Carg04487 vs. NCBI nr
Match: KAG6602389.1 (hypothetical protein SDJN03_07622, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033066.1 hypothetical protein SDJN02_07119, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 186.0 bits (471), Expect = 1.4e-43 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Carg04487 vs. NCBI nr
Match: XP_022938385.1 (uncharacterized protein LOC111444651 [Cucurbita moschata] >KAG6578688.1 hypothetical protein SDJN03_23136, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016227.1 hypothetical protein SDJN02_21333, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 155.6 bits (392), Expect = 2.0e-34 Identity = 76/92 (82.61%), Postives = 83/92 (90.22%), Query Frame = 0
BLAST of Carg04487 vs. NCBI nr
Match: KGN51326.1 (hypothetical protein Csa_009192 [Cucumis sativus]) HSP 1 Score: 153.7 bits (387), Expect = 7.6e-34 Identity = 76/93 (81.72%), Postives = 82/93 (88.17%), Query Frame = 0
BLAST of Carg04487 vs. NCBI nr
Match: KAG2730317.1 (hypothetical protein I3760_01G286500 [Carya illinoinensis] >KAG6670123.1 hypothetical protein CIPAW_01G289500 [Carya illinoinensis] >KAG6734853.1 hypothetical protein I3842_01G291100 [Carya illinoinensis]) HSP 1 Score: 137.5 bits (345), Expect = 5.7e-29 Identity = 65/84 (77.38%), Postives = 73/84 (86.90%), Query Frame = 0
BLAST of Carg04487 vs. NCBI nr
Match: KAG7998937.1 (hypothetical protein I3843_01G280700 [Carya illinoinensis]) HSP 1 Score: 135.2 bits (339), Expect = 2.8e-28 Identity = 64/84 (76.19%), Postives = 72/84 (85.71%), Query Frame = 0
BLAST of Carg04487 vs. ExPASy Swiss-Prot
Match: Q8S8S3 (Small polypeptide DEVIL 11 OS=Arabidopsis thaliana OX=3702 GN=DVL11 PE=3 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 2.7e-18 Identity = 47/74 (63.51%), Postives = 55/74 (74.32%), Query Frame = 0
BLAST of Carg04487 vs. ExPASy Swiss-Prot
Match: Q6IM93 (Small polypeptide DEVIL 8 OS=Arabidopsis thaliana OX=3702 GN=DVL8 PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 3.6e-10 Identity = 38/70 (54.29%), Postives = 43/70 (61.43%), Query Frame = 0
BLAST of Carg04487 vs. ExPASy Swiss-Prot
Match: Q8L7D0 (Small polypeptide DEVIL 13 OS=Arabidopsis thaliana OX=3702 GN=DVL13 PE=3 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 5.7e-08 Identity = 29/53 (54.72%), Postives = 37/53 (69.81%), Query Frame = 0
BLAST of Carg04487 vs. ExPASy Swiss-Prot
Match: Q6IM92 (Small polypeptide DEVIL 9 OS=Arabidopsis thaliana OX=3702 GN=DVL9 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 5.7e-08 Identity = 38/104 (36.54%), Postives = 45/104 (43.27%), Query Frame = 0
BLAST of Carg04487 vs. ExPASy Swiss-Prot
Match: Q8LE84 (Small polypeptide DEVIL 18 OS=Arabidopsis thaliana OX=3702 GN=DVL18 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.7e-07 Identity = 35/93 (37.63%), Postives = 51/93 (54.84%), Query Frame = 0
BLAST of Carg04487 vs. ExPASy TrEMBL
Match: A0A6J1FJM7 (uncharacterized protein LOC111444651 OS=Cucurbita moschata OX=3662 GN=LOC111444651 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 9.7e-35 Identity = 76/92 (82.61%), Postives = 83/92 (90.22%), Query Frame = 0
BLAST of Carg04487 vs. ExPASy TrEMBL
Match: A0A0A0KUB0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517730 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 3.7e-34 Identity = 76/93 (81.72%), Postives = 82/93 (88.17%), Query Frame = 0
BLAST of Carg04487 vs. ExPASy TrEMBL
Match: A0A6A1VY14 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR3G014741 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 2.0e-27 Identity = 64/88 (72.73%), Postives = 73/88 (82.95%), Query Frame = 0
BLAST of Carg04487 vs. ExPASy TrEMBL
Match: A0A5N6QDM8 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_001452 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 2.0e-27 Identity = 63/88 (71.59%), Postives = 74/88 (84.09%), Query Frame = 0
BLAST of Carg04487 vs. ExPASy TrEMBL
Match: A0A7J6E7R9 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_012773 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 2.6e-27 Identity = 67/86 (77.91%), Postives = 73/86 (84.88%), Query Frame = 0
BLAST of Carg04487 vs. TAIR 10
Match: AT2G39705.1 (ROTUNDIFOLIA like 8 ) HSP 1 Score: 92.4 bits (228), Expect = 1.9e-19 Identity = 47/74 (63.51%), Postives = 55/74 (74.32%), Query Frame = 0
BLAST of Carg04487 vs. TAIR 10
Match: AT3G55515.1 (ROTUNDIFOLIA like 7 ) HSP 1 Score: 65.5 bits (158), Expect = 2.6e-11 Identity = 38/70 (54.29%), Postives = 43/70 (61.43%), Query Frame = 0
BLAST of Carg04487 vs. TAIR 10
Match: AT1G07490.1 (ROTUNDIFOLIA like 3 ) HSP 1 Score: 58.2 bits (139), Expect = 4.1e-09 Identity = 38/104 (36.54%), Postives = 45/104 (43.27%), Query Frame = 0
BLAST of Carg04487 vs. TAIR 10
Match: AT2G29125.1 (ROTUNDIFOLIA like 2 ) HSP 1 Score: 58.2 bits (139), Expect = 4.1e-09 Identity = 29/53 (54.72%), Postives = 37/53 (69.81%), Query Frame = 0
BLAST of Carg04487 vs. TAIR 10
Match: AT5G59510.1 (ROTUNDIFOLIA like 5 ) HSP 1 Score: 56.6 bits (135), Expect = 1.2e-08 Identity = 35/93 (37.63%), Postives = 51/93 (54.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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