Carg04454 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg04454
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDUF761 domain-containing protein
LocationCarg_Chr04: 20341101 .. 20341640 (+)
RNA-Seq ExpressionCarg04454
SyntenyCarg04454
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCTCCATCTTCACCAAACATCCTTCCTTCTCTCCAAGTTTTCTCCCTCAAATCCTCTAATTCTTCTACCTTATTTCTTGTTAAATTCAAATCTTTCCTTCACACTATCATCTTCTCCCATTTGTGTCGGTTGGCTCGGGCGATCTCCCGAGCCAAGTCGACCGTGGTTCGGGTTTTGAAGAAAAATTATCACTACACGAATAGAAACAAGAACAAGATCTTTTTCGGGTCGTTTAGACTTCATTATAATTGGTGTTCTTCCCATGTGATGCCTGTGCCTGACCCCGTGTGGGAAGGTCATTTTTACTACGACACTGCCACTGCGGACAGCTCGCAGCTGTCCGGGTATTTGCAATGGTTGGAGGAGAGGAAATTAGAGAGCGAGACGGCAGCGGGGGTGACGACGATCGCAACGGAGATGAATGAGATCGACAAATTGGCGGAGATGTTCATAGCAAGCTGCCATGAGAAATTTAGGCTGGAGAAACAGGAATCAGCTAGAAGATTTCAAGAGATGATGGCAAGAAGCATGTGA

mRNA sequence

ATGGCTGCTCCATCTTCACCAAACATCCTTCCTTCTCTCCAAGTTTTCTCCCTCAAATCCTCTAATTCTTCTACCTTATTTCTTGTTAAATTCAAATCTTTCCTTCACACTATCATCTTCTCCCATTTGTGTCGGTTGGCTCGGGCGATCTCCCGAGCCAAGTCGACCGTGGTTCGGGTTTTGAAGAAAAATTATCACTACACGAATAGAAACAAGAACAAGATCTTTTTCGGGTCGTTTAGACTTCATTATAATTGGTGTTCTTCCCATGTGATGCCTGTGCCTGACCCCGTGTGGGAAGGTCATTTTTACTACGACACTGCCACTGCGGACAGCTCGCAGCTGTCCGGGTATTTGCAATGGTTGGAGGAGAGGAAATTAGAGAGCGAGACGGCAGCGGGGGTGACGACGATCGCAACGGAGATGAATGAGATCGACAAATTGGCGGAGATGTTCATAGCAAGCTGCCATGAGAAATTTAGGCTGGAGAAACAGGAATCAGCTAGAAGATTTCAAGAGATGATGGCAAGAAGCATGTGA

Coding sequence (CDS)

ATGGCTGCTCCATCTTCACCAAACATCCTTCCTTCTCTCCAAGTTTTCTCCCTCAAATCCTCTAATTCTTCTACCTTATTTCTTGTTAAATTCAAATCTTTCCTTCACACTATCATCTTCTCCCATTTGTGTCGGTTGGCTCGGGCGATCTCCCGAGCCAAGTCGACCGTGGTTCGGGTTTTGAAGAAAAATTATCACTACACGAATAGAAACAAGAACAAGATCTTTTTCGGGTCGTTTAGACTTCATTATAATTGGTGTTCTTCCCATGTGATGCCTGTGCCTGACCCCGTGTGGGAAGGTCATTTTTACTACGACACTGCCACTGCGGACAGCTCGCAGCTGTCCGGGTATTTGCAATGGTTGGAGGAGAGGAAATTAGAGAGCGAGACGGCAGCGGGGGTGACGACGATCGCAACGGAGATGAATGAGATCGACAAATTGGCGGAGATGTTCATAGCAAGCTGCCATGAGAAATTTAGGCTGGAGAAACAGGAATCAGCTAGAAGATTTCAAGAGATGATGGCAAGAAGCATGTGA

Protein sequence

MAAPSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRVLKKNYHYTNRNKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYDTATADSSQLSGYLQWLEERKLESETAAGVTTIATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM
Homology
[Close]
BLAST of Carg04454 vs. NCBI nr
Match: KAG7033099.1 (hypothetical protein SDJN02_07152, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 351.7 bits (901), Expect = 3.8e-93
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0 

Query: 1   MAAPSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRV 60
           MAAPSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRV
Sbjct: 1   MAAPSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRV 60

Query: 61  LKKNYHYTNRNKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYDTATADSSQLSGYLQ 120
           LKKNYHYTNRNKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYDTATADSSQLSGYLQ
Sbjct: 61  LKKNYHYTNRNKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYDTATADSSQLSGYLQ 120

Query: 121 WLEERKLESETAAGVTTIATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM 180
           WLEERKLESETAAGVTTIATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM
Sbjct: 121 WLEERKLESETAAGVTTIATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM 179

[Close]
BLAST of Carg04454 vs. NCBI nr
Match: XP_022961611.1 (uncharacterized protein LOC111462262 [Cucurbita moschata] >KAG6602421.1 hypothetical protein SDJN03_07654, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 349.7 bits (896), Expect = 1.4e-92
Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0 

Query: 1   MAAPSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRV 60
           MAAPSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRV
Sbjct: 1   MAAPSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRV 60

Query: 61  LKKNYHYTNRNKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYDTATADSSQLSGYLQ 120
           LKKNYHYTNRNKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYD ATADSSQLSGYLQ
Sbjct: 61  LKKNYHYTNRNKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYDAATADSSQLSGYLQ 120

Query: 121 WLEERKLESETAAGVTTIATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM 180
           WLEERKLESETAAGVTTIATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM
Sbjct: 121 WLEERKLESETAAGVTTIATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM 179

[Close]
BLAST of Carg04454 vs. NCBI nr
Match: XP_023548199.1 (uncharacterized protein LOC111806908 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023548209.1 uncharacterized protein LOC111806908 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 344.0 bits (881), Expect = 7.9e-91
Identity = 177/180 (98.33%), Postives = 178/180 (98.89%), Query Frame = 0 

Query: 1   MAAPSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRV 60
           MAAPSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRV
Sbjct: 1   MAAPSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRV 60

Query: 61  LKKNYHYTNRNKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYDTATADSSQLSGYLQ 120
           LKKNYHYTNRNKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYD ATADSSQLSGYLQ
Sbjct: 61  LKKNYHYTNRNKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYDAATADSSQLSGYLQ 120

Query: 121 WLEERKLESETAAGV-TTIATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM 180
           WLEERKLESETAAGV TT+ATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM
Sbjct: 121 WLEERKLESETAAGVTTTMATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM 180

[Close]
BLAST of Carg04454 vs. NCBI nr
Match: XP_022991048.1 (uncharacterized protein LOC111487754 [Cucurbita maxima])

HSP 1 Score: 334.3 bits (856), Expect = 6.3e-88
Identity = 169/179 (94.41%), Postives = 173/179 (96.65%), Query Frame = 0 

Query: 1   MAAPSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRV 60
           MAAPSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRV
Sbjct: 1   MAAPSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRV 60

Query: 61  LKKNYHYTNRNKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYDTATADSSQLSGYLQ 120
           LK+NY YTNRNKNK+FFGSFRLHYNWCSSHVMPVPDPVWEG+FYYD ATAD SQLSGYLQ
Sbjct: 61  LKRNYRYTNRNKNKVFFGSFRLHYNWCSSHVMPVPDPVWEGNFYYDAATADGSQLSGYLQ 120

Query: 121 WLEERKLESETAAGVTTIATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM 180
           WLEERKLESET AG T +ATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM
Sbjct: 121 WLEERKLESETGAGATMMATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM 179

[Close]
BLAST of Carg04454 vs. NCBI nr
Match: XP_038890518.1 (uncharacterized protein LOC120080048 [Benincasa hispida])

HSP 1 Score: 290.8 bits (743), Expect = 8.0e-75
Identity = 150/181 (82.87%), Postives = 162/181 (89.50%), Query Frame = 0 

Query: 3   APSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRVLK 62
           +PSSP ILPS+Q+FS+KSS+SSTL  VKFKSF+HTIIFS +CRL RAISRAKSTVV +LK
Sbjct: 6   SPSSPKILPSVQIFSIKSSHSSTLIFVKFKSFIHTIIFSQVCRLVRAISRAKSTVVHILK 65

Query: 63  KNYHYTNRNKNKIFFGSFRLHYNWCSSHVMPVPDPVWE-GHFYYD---TATADSSQLSGY 122
           K+YHY N+NKNKIFFGSFRLHYNWCSSHVMP+PDPVWE GHFYYD   T TAD SQLSGY
Sbjct: 66  KSYHYKNKNKNKIFFGSFRLHYNWCSSHVMPMPDPVWELGHFYYDHAATTTADGSQLSGY 125

Query: 123 LQWLEERKLESETAAGVTTIATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARS 180
           LQWLEERKLESET     T+ TEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARS
Sbjct: 126 LQWLEERKLESETMTTTATM-TEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARS 185

[Close]
BLAST of Carg04454 vs. ExPASy TrEMBL
Match: A0A6J1HAU6 (uncharacterized protein LOC111462262 OS=Cucurbita moschata OX=3662 GN=LOC111462262 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 7.0e-93
Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0 

Query: 1   MAAPSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRV 60
           MAAPSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRV
Sbjct: 1   MAAPSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRV 60

Query: 61  LKKNYHYTNRNKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYDTATADSSQLSGYLQ 120
           LKKNYHYTNRNKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYD ATADSSQLSGYLQ
Sbjct: 61  LKKNYHYTNRNKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYDAATADSSQLSGYLQ 120

Query: 121 WLEERKLESETAAGVTTIATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM 180
           WLEERKLESETAAGVTTIATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM
Sbjct: 121 WLEERKLESETAAGVTTIATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM 179

[Close]
BLAST of Carg04454 vs. ExPASy TrEMBL
Match: A0A6J1JV22 (uncharacterized protein LOC111487754 OS=Cucurbita maxima OX=3661 GN=LOC111487754 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.0e-88
Identity = 169/179 (94.41%), Postives = 173/179 (96.65%), Query Frame = 0 

Query: 1   MAAPSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRV 60
           MAAPSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRV
Sbjct: 1   MAAPSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRV 60

Query: 61  LKKNYHYTNRNKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYDTATADSSQLSGYLQ 120
           LK+NY YTNRNKNK+FFGSFRLHYNWCSSHVMPVPDPVWEG+FYYD ATAD SQLSGYLQ
Sbjct: 61  LKRNYRYTNRNKNKVFFGSFRLHYNWCSSHVMPVPDPVWEGNFYYDAATADGSQLSGYLQ 120

Query: 121 WLEERKLESETAAGVTTIATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM 180
           WLEERKLESET AG T +ATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM
Sbjct: 121 WLEERKLESETGAGATMMATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM 179

[Close]
BLAST of Carg04454 vs. ExPASy TrEMBL
Match: A0A0A0KP26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523130 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.3e-74
Identity = 148/180 (82.22%), Postives = 158/180 (87.78%), Query Frame = 0 

Query: 4   PSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRVLKK 63
           PSSPNILPS Q+FS+KSS+SSTL  VKFK+F+HTIIFS  CRLARAISRAKSTVV +LKK
Sbjct: 8   PSSPNILPSPQIFSIKSSHSSTLIFVKFKTFIHTIIFSQFCRLARAISRAKSTVVHILKK 67

Query: 64  NYHYTNRNKNKIFFGSFRLHYNWCSSHVMPVPDPVWE-GHFYYDTAT---ADSSQLSGYL 123
           +YHY ++NKNKIFFGSFRLHYNWCSSHVMPVPDP+WE GHFYYD AT   AD SQLSGYL
Sbjct: 68  SYHYKDKNKNKIFFGSFRLHYNWCSSHVMPVPDPIWELGHFYYDHATSTAADGSQLSGYL 127

Query: 124 QWLEERKLESETAAGVTTIATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM 180
           QWLEERKLESET    T    EMNEIDKLAEMFIASCHEKFRLEKQESARRFQ MMARSM
Sbjct: 128 QWLEERKLESETMTTATGTTAEMNEIDKLAEMFIASCHEKFRLEKQESARRFQAMMARSM 187

[Close]
BLAST of Carg04454 vs. ExPASy TrEMBL
Match: A0A5D3BVA7 (DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00500 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.8e-72
Identity = 146/181 (80.66%), Postives = 157/181 (86.74%), Query Frame = 0 

Query: 4   PSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRVLKK 63
           PSSP ILPS Q+FS+K S+SSTL  VKFK+F+HTIIFS  CRLARAISRAKSTVV +LKK
Sbjct: 7   PSSPKILPSAQIFSIKFSHSSTLIFVKFKTFIHTIIFSQFCRLARAISRAKSTVVHILKK 66

Query: 64  NYHYTNRNKNKIFFGSFRLHYNWCSSHVMPVPDPVWE-GHFYYDTAT---ADSSQLSGYL 123
           +YHY ++ KNKIFFGSFRLHYNWCSSHVMPVPDP+WE GHFYYD AT   AD SQLSGYL
Sbjct: 67  SYHYKDKKKNKIFFGSFRLHYNWCSSHVMPVPDPIWELGHFYYDHATSTAADGSQLSGYL 126

Query: 124 QWLEERKLESETAAGVTTIAT-EMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARS 180
           QWLEERKLESET    TT  T E+NEIDKLAEMFIASCHEKFRLEKQESARRFQ MMARS
Sbjct: 127 QWLEERKLESETMTTTTTATTAEVNEIDKLAEMFIASCHEKFRLEKQESARRFQAMMARS 186

[Close]
BLAST of Carg04454 vs. ExPASy TrEMBL
Match: A0A1S3C8P2 (uncharacterized protein LOC103498096 OS=Cucumis melo OX=3656 GN=LOC103498096 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.8e-72
Identity = 146/181 (80.66%), Postives = 157/181 (86.74%), Query Frame = 0 

Query: 4   PSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRVLKK 63
           PSSP ILPS Q+FS+K S+SSTL  VKFK+F+HTIIFS  CRLARAISRAKSTVV +LKK
Sbjct: 7   PSSPKILPSAQIFSIKFSHSSTLIFVKFKTFIHTIIFSQFCRLARAISRAKSTVVHILKK 66

Query: 64  NYHYTNRNKNKIFFGSFRLHYNWCSSHVMPVPDPVWE-GHFYYDTAT---ADSSQLSGYL 123
           +YHY ++ KNKIFFGSFRLHYNWCSSHVMPVPDP+WE GHFYYD AT   AD SQLSGYL
Sbjct: 67  SYHYKDKKKNKIFFGSFRLHYNWCSSHVMPVPDPIWELGHFYYDHATSTAADGSQLSGYL 126

Query: 124 QWLEERKLESETAAGVTTIAT-EMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARS 180
           QWLEERKLESET    TT  T E+NEIDKLAEMFIASCHEKFRLEKQESARRFQ MMARS
Sbjct: 127 QWLEERKLESETMTTTTTATTAEVNEIDKLAEMFIASCHEKFRLEKQESARRFQAMMARS 186

[Close]
BLAST of Carg04454 vs. TAIR 10
Match: AT3G57950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42180.1); Has 81 Blast hits to 81 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 136.7 bits (343), Expect = 1.8e-32
Identity = 80/179 (44.69%), Postives = 106/179 (59.22%), Query Frame = 0 

Query: 13  LQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRVLKKNYHYTNR-- 72
           L+  S  SS+SS+   +K K+ +  ++   L R  RA+++AKS  + + K N +   R  
Sbjct: 3   LKSSSPSSSSSSSSSSMKLKTLIQNLLTHPLYRFLRALAKAKSIFLEISKHNSNNKKRKL 62

Query: 73  ----------NKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYDTATADSSQLSGYLQ 132
                     N+ KIFFGSFRLHYNWCSSHV+PVP P      Y +    D SQLSGYL+
Sbjct: 63  MMLFPTKASKNQRKIFFGSFRLHYNWCSSHVVPVPQPFPFPSSYINGEEEDDSQLSGYLE 122

Query: 133 WLEERKLESETAAGVTTIATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM 180
           WLE +K +     G        ++ID LA+MFIA+CHEKF LEK ES RRFQEM+ R +
Sbjct: 123 WLEHKKFDDVEEIGDVVADGGDDDIDHLADMFIANCHEKFLLEKVESYRRFQEMLERGL 181

[Close]
BLAST of Carg04454 vs. TAIR 10
Match: AT5G06790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible, petal differentiation and expansion stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 120.6 bits (301), Expect = 1.3e-27
Identity = 86/204 (42.16%), Postives = 109/204 (53.43%), Query Frame = 0 

Query: 12  SLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRVL-KKNYHY--- 71
           S+      SS+S T   +K KS + T+I S +CRL R ISR  S +VRVL KK Y++   
Sbjct: 11  SMSSSQCSSSSSPTSSSMKLKSLIQTLIISQVCRLLREISRVSSILVRVLRKKQYNFLSV 70

Query: 72  ---------TNRNKNKIFFGSFRLHYNWCSSHVMPVPDPV----------------WEGH 131
                    + + KN I FGSFRLHYN+CSSHV+PV  PV                WE  
Sbjct: 71  SSLLYPKRVSKKQKNNILFGSFRLHYNFCSSHVVPVSAPVRLPEELYLAHLVHESTWES- 130

Query: 132 FYYDTATADS--------SQLSGYLQWLEERKLESETAAGVTTIATEMNEIDKLAEMFIA 179
             Y T + D         SQLS YL+ LE++  + +         T MNEIDKLA+ FIA
Sbjct: 131 -MYSTESMDGRDDDDQEPSQLSSYLRQLEDKVKDGQE----EETETMMNEIDKLADRFIA 190

[Close]
BLAST of Carg04454 vs. TAIR 10
Match: AT2G42180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 83.6 bits (205), Expect = 1.8e-16
Identity = 69/178 (38.76%), Postives = 94/178 (52.81%), Query Frame = 0 

Query: 18  LKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRVLKKN-------YHYTNR 77
           LK S+SS+      K+    +I   L RL R++SRA+S ++ + K N         YT +
Sbjct: 3   LKRSSSSS-HSTNLKTLFINLITHSLYRLLRSLSRARSVLIEISKHNKKRLFMMMFYTTK 62

Query: 78  ---NKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYDTATADSSQL-SGYLQWLEER- 137
              N++ IFFGS        S  V+PV  P     F  D    D   L S YLQWLEER 
Sbjct: 63  SSMNQHNIFFGS--------SHVVVPVTKPF---PFSLDGHVEDEDNLESQYLQWLEERV 122

Query: 138 ----KLESETAAGVTTIATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM 180
                +  + + G   +  +  +ID+LA+ FIA CHEKF LEK ES RRFQ+M+ARS+
Sbjct: 123 DENNNINDDQSVGERDVGDD--DIDRLADKFIARCHEKFLLEKVESYRRFQDMLARSL 166

The following BLAST results are available for this feature:
BLAST of Carg04454 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7033099.13.8e-93100.00hypothetical protein SDJN02_07152, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022961611.11.4e-9299.44uncharacterized protein LOC111462262 [Cucurbita moschata] >KAG6602421.1 hypothet... [more]
XP_023548199.17.9e-9198.33uncharacterized protein LOC111806908 isoform X1 [Cucurbita pepo subsp. pepo] >XP... [more]
XP_022991048.16.3e-8894.41uncharacterized protein LOC111487754 [Cucurbita maxima][more]
XP_038890518.18.0e-7582.87uncharacterized protein LOC120080048 [Benincasa hispida][more]
BLAST of Carg04454 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg04454 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HAU67.0e-9399.44uncharacterized protein LOC111462262 OS=Cucurbita moschata OX=3662 GN=LOC1114622... [more]
A0A6J1JV223.0e-8894.41uncharacterized protein LOC111487754 OS=Cucurbita maxima OX=3661 GN=LOC111487754... [more]
A0A0A0KP263.3e-7482.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523130 PE=4 SV=1[more]
A0A5D3BVA76.8e-7280.66DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A1S3C8P26.8e-7280.66uncharacterized protein LOC103498096 OS=Cucumis melo OX=3656 GN=LOC103498096 PE=... [more]
BLAST of Carg04454 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G57950.11.8e-3244.69unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G06790.11.3e-2742.16unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G42180.11.8e-1638.76unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 143..177
e-value: 7.0E-14
score: 51.1
NoneNo IPR availablePANTHERPTHR33450EMB|CAB67623.1-RELATEDcoord: 4..179
NoneNo IPR availablePANTHERPTHR33450:SF4DUF761 DOMAIN PROTEINcoord: 4..179

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg04454-RACarg04454-RAmRNA