Carg04446 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg04446
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor MYB118-like
Location	Carg_Chr04: 20378506 .. 20379228 (-)
RNA-Seq Expression	Carg04446
Synteny	Carg04446

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTCGATTCCAATTTCAAAGATGATCTCCCGCTCCTCTCGAGCTTCTTCTCCGATAAGCCAGAGTCGAAGCGGAAGCTCAACGACGACAACAACGACGATGACACCGGCGAATTTTCCGCCATGGAATTAGCCACCTCCCCATCATCATCCAAGGGTTTGTTCCATAATTTGCAGCTCCACAACTTCAATCGTGATCGTGAACATGATCATGATCATAATCATAATCATAATCGGTATCATCAATATCTTCATCACTTCCCCATCAACGGATCTGATTCGTCGAGCCATCACGAGCTCGATCGTCATCAGTTCTCAATTGACGGGTCCTTACAAACCCTTCTTTCAGGCATGCCAACCCAAACCTTTGATCCAAATTTTCAACCTTTTGGCAATGAATTCTCCAAAGATCACACCTTTGAAAATGGGGCCAAGTTCATGCATGGCCTTCTAGGGTCAAGAGCCGTTTGGACAAATTTTCCAGGAAACTTTGTGCCTCAATTTTCTCAGCCGCCAAACAGCAGCAGTAGTAGTAGTACTCATTTAGGGCTGGGACCAGCAACTGTAGGGCGGTGGTTTCTTGATGAGATCTCTTATAATACCGACAATGGATACGATCAGAACAAGAAGAAAAAAAGAATTCAGTCGAGAAAGGAGAACCGCCCTCTCCGAACAGCAGATATGGCGTCTGTTTCGATTCGGATCTCCGAAACATCGTAA

mRNA sequence

ATGGAGTTCGATTCCAATTTCAAAGATGATCTCCCGCTCCTCTCGAGCTTCTTCTCCGATAAGCCAGAGTCGAAGCGGAAGCTCAACGACGACAACAACGACGATGACACCGGCGAATTTTCCGCCATGGAATTAGCCACCTCCCCATCATCATCCAAGGGTTTGTTCCATAATTTGCAGCTCCACAACTTCAATCGTGATCGTGAACATGATCATGATCATAATCATAATCATAATCGGTATCATCAATATCTTCATCACTTCCCCATCAACGGATCTGATTCGTCGAGCCATCACGAGCTCGATCGTCATCAGTTCTCAATTGACGGGTCCTTACAAACCCTTCTTTCAGGCATGCCAACCCAAACCTTTGATCCAAATTTTCAACCTTTTGGCAATGAATTCTCCAAAGATCACACCTTTGAAAATGGGGCCAAGTTCATGCATGGCCTTCTAGGGTCAAGAGCCGTTTGGACAAATTTTCCAGGAAACTTTGTGCCTCAATTTTCTCAGCCGCCAAACAGCAGCAGTAGTAGTAGTACTCATTTAGGGCTGGGACCAGCAACTGTAGGGCGGTGGTTTCTTGATGAGATCTCTTATAATACCGACAATGGATACGATCAGAACAAGAAGAAAAAAAGAATTCAGTCGAGAAAGGAGAACCGCCCTCTCCGAACAGCAGATATGGCGTCTGTTTCGATTCGGATCTCCGAAACATCGTAA

Coding sequence (CDS)

ATGGAGTTCGATTCCAATTTCAAAGATGATCTCCCGCTCCTCTCGAGCTTCTTCTCCGATAAGCCAGAGTCGAAGCGGAAGCTCAACGACGACAACAACGACGATGACACCGGCGAATTTTCCGCCATGGAATTAGCCACCTCCCCATCATCATCCAAGGGTTTGTTCCATAATTTGCAGCTCCACAACTTCAATCGTGATCGTGAACATGATCATGATCATAATCATAATCATAATCGGTATCATCAATATCTTCATCACTTCCCCATCAACGGATCTGATTCGTCGAGCCATCACGAGCTCGATCGTCATCAGTTCTCAATTGACGGGTCCTTACAAACCCTTCTTTCAGGCATGCCAACCCAAACCTTTGATCCAAATTTTCAACCTTTTGGCAATGAATTCTCCAAAGATCACACCTTTGAAAATGGGGCCAAGTTCATGCATGGCCTTCTAGGGTCAAGAGCCGTTTGGACAAATTTTCCAGGAAACTTTGTGCCTCAATTTTCTCAGCCGCCAAACAGCAGCAGTAGTAGTAGTACTCATTTAGGGCTGGGACCAGCAACTGTAGGGCGGTGGTTTCTTGATGAGATCTCTTATAATACCGACAATGGATACGATCAGAACAAGAAGAAAAAAAGAATTCAGTCGAGAAAGGAGAACCGCCCTCTCCGAACAGCAGATATGGCGTCTGTTTCGATTCGGATCTCCGAAACATCGTAA

Protein sequence

MEFDSNFKDDLPLLSSFFSDKPESKRKLNDDNNDDDTGEFSAMELATSPSSSKGLFHNLQLHNFNRDREHDHDHNHNHNRYHQYLHHFPINGSDSSSHHELDRHQFSIDGSLQTLLSGMPTQTFDPNFQPFGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNFVPQFSQPPNSSSSSSTHLGLGPATVGRWFLDEISYNTDNGYDQNKKKKRIQSRKENRPLRTADMASVSIRISETS

Homology

[Close]

BLAST of Carg04446 vs. NCBI nr
Match: KAG7033107.1 (hypothetical protein SDJN02_07160, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 483.4 bits (1243), Expect = 1.1e-132
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MEFDSNFKDDLPLLSSFFSDKPESKRKLNDDNNDDDTGEFSAMELATSPSSSKGLFHNLQ 60
           MEFDSNFKDDLPLLSSFFSDKPESKRKLNDDNNDDDTGEFSAMELATSPSSSKGLFHNLQ
Sbjct: 1   MEFDSNFKDDLPLLSSFFSDKPESKRKLNDDNNDDDTGEFSAMELATSPSSSKGLFHNLQ 60

Query: 61  LHNFNRDREHDHDHNHNHNRYHQYLHHFPINGSDSSSHHELDRHQFSIDGSLQTLLSGMP 120
           LHNFNRDREHDHDHNHNHNRYHQYLHHFPINGSDSSSHHELDRHQFSIDGSLQTLLSGMP
Sbjct: 61  LHNFNRDREHDHDHNHNHNRYHQYLHHFPINGSDSSSHHELDRHQFSIDGSLQTLLSGMP 120

Query: 121 TQTFDPNFQPFGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNFVPQFSQPPNSSSSSS 180
           TQTFDPNFQPFGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNFVPQFSQPPNSSSSSS
Sbjct: 121 TQTFDPNFQPFGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNFVPQFSQPPNSSSSSS 180

Query: 181 THLGLGPATVGRWFLDEISYNTDNGYDQNKKKKRIQSRKENRPLRTADMASVSIRISETS 240
           THLGLGPATVGRWFLDEISYNTDNGYDQNKKKKRIQSRKENRPLRTADMASVSIRISETS
Sbjct: 181 THLGLGPATVGRWFLDEISYNTDNGYDQNKKKKRIQSRKENRPLRTADMASVSIRISETS 240

[Close]

BLAST of Carg04446 vs. NCBI nr
Match: KAG6602428.1 (hypothetical protein SDJN03_07661, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 453.4 bits (1165), Expect = 1.2e-123
Identity = 222/223 (99.55%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MEFDSNFKDDLPLLSSFFSDKPESKRKLNDDNNDDDTGEFSAMELATSPSSSKGLFHNLQ 60
           MEFDSNFKDDLPLLSSFFSDKPESKRKLNDD+NDDDTGEFSAMELATSPSSSKGLFHNLQ
Sbjct: 1   MEFDSNFKDDLPLLSSFFSDKPESKRKLNDDDNDDDTGEFSAMELATSPSSSKGLFHNLQ 60

Query: 61  LHNFNRDREHDHDHNHNHNRYHQYLHHFPINGSDSSSHHELDRHQFSIDGSLQTLLSGMP 120
           LHNFNRDREHDHDHNHNHNRYHQYLHHFPINGSDSSSHHELDRHQFSIDGSLQTLLSGMP
Sbjct: 61  LHNFNRDREHDHDHNHNHNRYHQYLHHFPINGSDSSSHHELDRHQFSIDGSLQTLLSGMP 120

Query: 121 TQTFDPNFQPFGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNFVPQFSQPPNSSSSSS 180
           TQTFDPNFQPFGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNFVPQFSQPPNSSSSSS
Sbjct: 121 TQTFDPNFQPFGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNFVPQFSQPPNSSSSSS 180

Query: 181 THLGLGPATVGRWFLDEISYNTDNGYDQNKKKKRIQSRKENRP 224
           THLGLGPATVGRWFLDEISYNTDNGYDQNKKKKRIQSRKENRP
Sbjct: 181 THLGLGPATVGRWFLDEISYNTDNGYDQNKKKKRIQSRKENRP 223

[Close]

BLAST of Carg04446 vs. NCBI nr
Match: XP_022963190.1 (transcription factor MYB118-like [Cucurbita moschata])

HSP 1 Score: 450.3 bits (1157), Expect = 1.1e-122
Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 1   MEFDSNFKDDLPLLSSFFSDKPESKRKLNDDNNDDDTGEFSAMELATSPSSSKGLFHNLQ 60
           MEFDSNFKDDLPLLSSFFSDKPESKRKLNDD+NDDDTGEFSAMELATSPSSSKGLFHNLQ
Sbjct: 1   MEFDSNFKDDLPLLSSFFSDKPESKRKLNDDDNDDDTGEFSAMELATSPSSSKGLFHNLQ 60

Query: 61  LHNFNRDREHDHDHNHNHNRYHQYLHHFPINGSDSSSHHELDRHQFSIDGSLQTLLSGMP 120
           LHNFNRDREHDHDHNHNHNRYHQYLHHFPINGSDSSSHHELDRHQFSI GSLQTLLSGMP
Sbjct: 61  LHNFNRDREHDHDHNHNHNRYHQYLHHFPINGSDSSSHHELDRHQFSIAGSLQTLLSGMP 120

Query: 121 TQTFDPNFQPFGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNFVPQFSQPPNSSSSSS 180
           TQTFDPNFQPFGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNFVPQFSQPPNSSSSSS
Sbjct: 121 TQTFDPNFQPFGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNFVPQFSQPPNSSSSSS 180

Query: 181 THLGLGPATVGRWFLDEISYNTDNGYDQNKKKKRIQSRKENRP 224
           THLGLGPATVGRWFLDEISYNTDNGYDQNKKKKRIQSRKENRP
Sbjct: 181 THLGLGPATVGRWFLDEISYNTDNGYDQNKKKKRIQSRKENRP 223

[Close]

BLAST of Carg04446 vs. NCBI nr
Match: XP_023540265.1 (transcription factor MYB118-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 426.8 bits (1096), Expect = 1.2e-115
Identity = 211/224 (94.20%), Postives = 217/224 (96.88%), Query Frame = 0


Query: 1   MEFDSNFKDDLPLLSSFFSDKPESKRKLNDDNNDDDTGEFSAMELATSPSSSKGLFHNLQ 60
           MEFDSNFKDDLPLLSSFFSDKPESKRKLNDD+NDDDTGEFSAMELATSPSSSKGLFHNLQ
Sbjct: 1   MEFDSNFKDDLPLLSSFFSDKPESKRKLNDDDNDDDTGEFSAMELATSPSSSKGLFHNLQ 60

Query: 61  LHNFNRDREHDHDHNHNHNRYHQYLHHFPINGSDSSSHHELDRHQFSIDGSLQTLLSGMP 120
           LHNF+RD + D D +HNHNRYHQYLHHFPINGSDSSSHHELDRHQFSIDGSLQTLL+GMP
Sbjct: 61  LHNFDRDHDRDRDRDHNHNRYHQYLHHFPINGSDSSSHHELDRHQFSIDGSLQTLLAGMP 120

Query: 121 TQTFDPNFQPFGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNFVPQFSQPPNSSS-SS 180
            QTFDPNFQPFGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNFVPQFSQPPNS+S SS
Sbjct: 121 NQTFDPNFQPFGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNFVPQFSQPPNSNSRSS 180

Query: 181 STHLGLGPATVGRWFLDEISYNTDNGYDQNKKKKRIQSRKENRP 224
           STHLGLGPAT GRWFLDEISYNTDNGYDQNKKKKRIQSRKENRP
Sbjct: 181 STHLGLGPATAGRWFLDEISYNTDNGYDQNKKKKRIQSRKENRP 224

[Close]

BLAST of Carg04446 vs. NCBI nr
Match: XP_022991104.1 (transcription factor MYB118-like [Cucurbita maxima])

HSP 1 Score: 406.0 bits (1042), Expect = 2.3e-109
Identity = 205/227 (90.31%), Postives = 215/227 (94.71%), Query Frame = 0


Query: 1   MEFDSNFKDDLPLLSSFFSDKPESKRKLNDDNNDDDTGEFSAMELATSPSSSKGLFHNLQ 60
           MEFDSNFKDDLPLLSSFFSDKP+SKR+LNDD+NDDDTGEFSAMELATSPSSSKGLFHNLQ
Sbjct: 1   MEFDSNFKDDLPLLSSFFSDKPKSKRQLNDDDNDDDTGEFSAMELATSPSSSKGLFHNLQ 60

Query: 61  LHNFNRDREHDHDHNHNHNRYHQYLHHFPINGSDS----SSHHELDRHQFSIDGSLQTLL 120
           LH+F    +HDH H+HNHNR+HQYLHHFPINGSDS    SS HELDRHQFSI+GSLQTLL
Sbjct: 61  LHSF----DHDHHHDHNHNRHHQYLHHFPINGSDSINNNSSQHELDRHQFSINGSLQTLL 120

Query: 121 SGMPTQTFDPNFQPFGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNFVPQFSQPPNSS 180
           SGMPTQ+FDPNFQPFGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNF+PQFSQPPN S
Sbjct: 121 SGMPTQSFDPNFQPFGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNFLPQFSQPPN-S 180

Query: 181 SSSSTHLGLGPATVGRWFLDEISYNTDNGYDQNKKKKRIQSRKENRP 224
           SSSSTHLGLGPAT GRWFLDEISYNTDNGYDQNKKKKRIQSRKENRP
Sbjct: 181 SSSSTHLGLGPATAGRWFLDEISYNTDNGYDQNKKKKRIQSRKENRP 222

[Close]

BLAST of Carg04446 vs. ExPASy TrEMBL
Match: A0A6J1HHA2 (transcription factor MYB118-like OS=Cucurbita moschata OX=3662 GN=LOC111463472 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 5.1e-123
Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 1   MEFDSNFKDDLPLLSSFFSDKPESKRKLNDDNNDDDTGEFSAMELATSPSSSKGLFHNLQ 60
           MEFDSNFKDDLPLLSSFFSDKPESKRKLNDD+NDDDTGEFSAMELATSPSSSKGLFHNLQ
Sbjct: 1   MEFDSNFKDDLPLLSSFFSDKPESKRKLNDDDNDDDTGEFSAMELATSPSSSKGLFHNLQ 60

Query: 61  LHNFNRDREHDHDHNHNHNRYHQYLHHFPINGSDSSSHHELDRHQFSIDGSLQTLLSGMP 120
           LHNFNRDREHDHDHNHNHNRYHQYLHHFPINGSDSSSHHELDRHQFSI GSLQTLLSGMP
Sbjct: 61  LHNFNRDREHDHDHNHNHNRYHQYLHHFPINGSDSSSHHELDRHQFSIAGSLQTLLSGMP 120

Query: 121 TQTFDPNFQPFGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNFVPQFSQPPNSSSSSS 180
           TQTFDPNFQPFGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNFVPQFSQPPNSSSSSS
Sbjct: 121 TQTFDPNFQPFGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNFVPQFSQPPNSSSSSS 180

Query: 181 THLGLGPATVGRWFLDEISYNTDNGYDQNKKKKRIQSRKENRP 224
           THLGLGPATVGRWFLDEISYNTDNGYDQNKKKKRIQSRKENRP
Sbjct: 181 THLGLGPATVGRWFLDEISYNTDNGYDQNKKKKRIQSRKENRP 223

[Close]

BLAST of Carg04446 vs. ExPASy TrEMBL
Match: A0A6J1JTV8 (transcription factor MYB118-like OS=Cucurbita maxima OX=3661 GN=LOC111487800 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.1e-109
Identity = 205/227 (90.31%), Postives = 215/227 (94.71%), Query Frame = 0


Query: 1   MEFDSNFKDDLPLLSSFFSDKPESKRKLNDDNNDDDTGEFSAMELATSPSSSKGLFHNLQ 60
           MEFDSNFKDDLPLLSSFFSDKP+SKR+LNDD+NDDDTGEFSAMELATSPSSSKGLFHNLQ
Sbjct: 1   MEFDSNFKDDLPLLSSFFSDKPKSKRQLNDDDNDDDTGEFSAMELATSPSSSKGLFHNLQ 60

Query: 61  LHNFNRDREHDHDHNHNHNRYHQYLHHFPINGSDS----SSHHELDRHQFSIDGSLQTLL 120
           LH+F    +HDH H+HNHNR+HQYLHHFPINGSDS    SS HELDRHQFSI+GSLQTLL
Sbjct: 61  LHSF----DHDHHHDHNHNRHHQYLHHFPINGSDSINNNSSQHELDRHQFSINGSLQTLL 120

Query: 121 SGMPTQTFDPNFQPFGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNFVPQFSQPPNSS 180
           SGMPTQ+FDPNFQPFGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNF+PQFSQPPN S
Sbjct: 121 SGMPTQSFDPNFQPFGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNFLPQFSQPPN-S 180

Query: 181 SSSSTHLGLGPATVGRWFLDEISYNTDNGYDQNKKKKRIQSRKENRP 224
           SSSSTHLGLGPAT GRWFLDEISYNTDNGYDQNKKKKRIQSRKENRP
Sbjct: 181 SSSSTHLGLGPATAGRWFLDEISYNTDNGYDQNKKKKRIQSRKENRP 222

[Close]

BLAST of Carg04446 vs. ExPASy TrEMBL
Match: A0A6J1BX46 (transcription factor MYB118-like OS=Momordica charantia OX=3673 GN=LOC111006456 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 6.4e-57
Identity = 145/241 (60.17%), Postives = 170/241 (70.54%), Query Frame = 0


Query: 1   MEFDSNFKDDLPLLSSFFSDKPESKRKLN---DDNNDDDTGEFSAMELATSPSSSKGLFH 60
           MEFDSNFKDDLPLLSSFFSDK +SK KL+   D    DD GEF  MEL +S SSSKGLFH
Sbjct: 1   MEFDSNFKDDLPLLSSFFSDKTDSKLKLDIDVDSGGGDDGGEFLGMELPSS-SSSKGLFH 60

Query: 61  NLQLHNFNRDREHDHDHNHNHNRYHQYLHHFPINGSDSSSHHELDRHQFSIDGSLQTLLS 120
           +LQ+H++        DH+H +   HQYLHHFPINGSDS +      H FSIDGSLQ+L+S
Sbjct: 61  SLQVHHY--------DHHHQN---HQYLHHFPINGSDSINP---QHHNFSIDGSLQSLIS 120

Query: 121 GM------PTQTFDPNFQP--FGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNFVPQF 180
           GM       +  FDPNFQP   GNEFSKDHTFENGAKFMHGLLGS AVWTNFPGNF+PQ 
Sbjct: 121 GMNMPASSQSCNFDPNFQPNFLGNEFSKDHTFENGAKFMHGLLGSGAVWTNFPGNFLPQI 180

Query: 181 SQPPNSSSSSST--HLGLGPATVGRWFLDE----ISYNTDNGYDQNKKKKRI-QSRKENR 224
           SQ PNS++++S      LG A++   FLD     I+ ++    DQNKKKKR+ Q RKEN+
Sbjct: 181 SQLPNSNNNNSIIHQAALGSASM---FLDHEASCITADSSGFNDQNKKKKRVLQIRKENK 223

[Close]

BLAST of Carg04446 vs. ExPASy TrEMBL
Match: A0A6J1JX07 (transcription factor MYB118-like OS=Cucurbita maxima OX=3661 GN=LOC111489101 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 1.5e-53
Identity = 133/230 (57.83%), Postives = 155/230 (67.39%), Query Frame = 0


Query: 1   MEFDSNFKDDLPLLSSFFSDKPESKRKLNDDNNDDDTGEFSAMELATSPSSSKGLFHNLQ 60
           MEFDSNFKDDLPLLSSFFSDK ESK  L    +DDD  EFS MEL  SPSSSKGLF +L 
Sbjct: 1   MEFDSNFKDDLPLLSSFFSDKAESKPPL----DDDDDREFSGMELGCSPSSSKGLFQSLL 60

Query: 61  LHNFNRDREHDHDHNHNHNRYHQYLH-HFP-INGSDS-----SSHHELDRHQFSIDGSLQ 120
                       DH+H++N + QYLH +FP +N SDS     +SH++LD H+  +DGSLQ
Sbjct: 61  ------------DHHHHNNNHFQYLHQYFPVVNRSDSIDNSNNSHYDLDHHRRRLDGSLQ 120

Query: 121 TLLSGMPTQTFDPNFQPFGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNFVPQFSQPP 180
           +LLS MPTQ FDP F+ F NE  KD +FE+GAKFMHG  GS  VWTNFPGNF+PQFSQPP
Sbjct: 121 SLLSEMPTQCFDPKFEAFSNEAPKDQSFESGAKFMHGFAGSGGVWTNFPGNFMPQFSQPP 180

Query: 181 NSSSSSSTHLGLGPATVGRWFLDEISYNTDNGYDQNKKKKRIQSRKENRP 224
           NS      HLGLG +            +T  GYD  KK+KRIQ RKEN+P
Sbjct: 181 NS------HLGLGLS------------DTIIGYDHIKKRKRIQLRKENKP 196

[Close]

BLAST of Carg04446 vs. ExPASy TrEMBL
Match: A0A6J1FFZ3 (transcription factor MYB118-like OS=Cucurbita moschata OX=3662 GN=LOC111445358 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 9.5e-53
Identity = 132/230 (57.39%), Postives = 154/230 (66.96%), Query Frame = 0


Query: 1   MEFDSNFKDDLPLLSSFFSDKPESKRKLNDDNNDDDTGEFSAMELATSPSSSKGLFHNLQ 60
           MEFDSNFKDDLPLLSSFFSDK ESK  L     DDD  +FS MEL +SPSSSKGLFH+L 
Sbjct: 1   MEFDSNFKDDLPLLSSFFSDKAESKPPL-----DDDDRKFSRMELGSSPSSSKGLFHSLL 60

Query: 61  LHNFNRDREHDHDHNHNHNRYHQYLH-HFP-INGSDS-----SSHHELDRHQFSIDGSLQ 120
            H           HNHN+N + QYLH +FP +  SDS     +SH++LD H+  +DGSLQ
Sbjct: 61  DH-----------HNHNNNHF-QYLHQYFPVVTRSDSINNSNNSHYDLDHHRRRLDGSLQ 120

Query: 121 TLLSGMPTQTFDPNFQPFGNEFSKDHTFENGAKFMHGLLGSRAVWTNFPGNFVPQFSQPP 180
           +LLS MPTQ F+P F+ F NE  KDH FE+GAK MHG +GS  VWTNFPGNF+PQFSQPP
Sbjct: 121 SLLSEMPTQCFEPKFEAFSNEVPKDHIFESGAKLMHGFVGSGGVWTNFPGNFMPQFSQPP 180

Query: 181 NSSSSSSTHLGLGPATVGRWFLDEISYNTDNGYDQNKKKKRIQSRKENRP 224
           NS      HLGLG              +T  GYD  KK+KRIQ R+EN+P
Sbjct: 181 NS------HLGLGLT------------DTIIGYDHIKKRKRIQLRRENKP 195

The following BLAST results are available for this feature:

BLAST of Carg04446 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033107.1	1.1e-132	100.00	hypothetical protein SDJN02_07160, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6602428.1	1.2e-123	99.55	hypothetical protein SDJN03_07661, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022963190.1	1.1e-122	99.10	transcription factor MYB118-like [Cucurbita moschata]	[more]
XP_023540265.1	1.2e-115	94.20	transcription factor MYB118-like [Cucurbita pepo subsp. pepo]	[more]
XP_022991104.1	2.3e-109	90.31	transcription factor MYB118-like [Cucurbita maxima]	[more]

BLAST of Carg04446 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg04446 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HHA2	5.1e-123	99.10	transcription factor MYB118-like OS=Cucurbita moschata OX=3662 GN=LOC111463472 P...	[more]
A0A6J1JTV8	1.1e-109	90.31	transcription factor MYB118-like OS=Cucurbita maxima OX=3661 GN=LOC111487800 PE=...	[more]
A0A6J1BX46	6.4e-57	60.17	transcription factor MYB118-like OS=Momordica charantia OX=3673 GN=LOC111006456 ...	[more]
A0A6J1JX07	1.5e-53	57.83	transcription factor MYB118-like OS=Cucurbita maxima OX=3661 GN=LOC111489101 PE=...	[more]
A0A6J1FFZ3	9.5e-53	57.39	transcription factor MYB118-like OS=Cucurbita moschata OX=3662 GN=LOC111445358 P...	[more]

BLAST of Carg04446 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04446-RA	Carg04446-RA	mRNA