Homology
BLAST of Carg04429 vs. NCBI nr
Match:
KAG7033124.1 (RNA exonuclease 4, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 625.9 bits (1613), Expect = 1.7e-175
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0
Query: 1 MDHPSETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIG 60
MDHPSETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIG
Sbjct: 1 MDHPSETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIG 60
Query: 61 PRPKQECNNSQITTRFRNMGICDKLTSDNGRMRRHEAVALACRMVGGGSDGSLDICARVC 120
PRPKQECNNSQITTRFRNMGICDKLTSDNGRMRRHEAVALACRMVGGGSDGSLDICARVC
Sbjct: 61 PRPKQECNNSQITTRFRNMGICDKLTSDNGRMRRHEAVALACRMVGGGSDGSLDICARVC 120
Query: 121 LIDENETIIFSTYVNPTLPITNYRLESTGVGPEYMRDRAMPLKQVQKKIQDILCNGEPMW 180
LIDENETIIFSTYVNPTLPITNYRLESTGVGPEYMRDRAMPLKQVQKKIQDILCNGEPMW
Sbjct: 121 LIDENETIIFSTYVNPTLPITNYRLESTGVGPEYMRDRAMPLKQVQKKIQDILCNGEPMW 180
Query: 181 KIRPGVGGKARILVGHGLGDHLKSLQIEYPPFMIRYDIQNGSKDPYEDCVATMRLYMRMR 240
KIRPGVGGKARILVGHGLGDHLKSLQIEYPPFMIRYDIQNGSKDPYEDCVATMRLYMRMR
Sbjct: 181 KIRPGVGGKARILVGHGLGDHLKSLQIEYPPFMIRYDIQNGSKDPYEDCVATMRLYMRMR 240
Query: 241 SQVHKIEEYPLASDPQNKNNFAIWKQFELERMSPEQMLEVSRSDYYCWCLDSKL 295
SQVHKIEEYPLASDPQNKNNFAIWKQFELERMSPEQMLEVSRSDYYCWCLDSKL
Sbjct: 241 SQVHKIEEYPLASDPQNKNNFAIWKQFELERMSPEQMLEVSRSDYYCWCLDSKL 294
BLAST of Carg04429 vs. NCBI nr
Match:
XP_022961916.1 (RNA exonuclease 4-like [Cucurbita moschata])
HSP 1 Score: 594.0 bits (1530), Expect = 7.2e-166
Identity = 294/355 (82.82%), Postives = 294/355 (82.82%), Query Frame = 0
Query: 1 MDHPSETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIG 60
MDHPSETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIG
Sbjct: 1 MDHPSETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIG 60
Query: 61 PRPKQECNN----------------------------------SQITTRFRNMGICDKLT 120
PRPKQECNN SQITTRFRNMGICDKLT
Sbjct: 61 PRPKQECNNVFVIRGCKICLAIFESPHTLRLHQERCQLRSPNSSQITTRFRNMGICDKLT 120
Query: 121 SDNGRMRRHEAVALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLE 180
SDNGRMRRHEAVALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLE
Sbjct: 121 SDNGRMRRHEAVALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLE 180
Query: 181 STGVGPEYMRDRAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQ 240
STGVGPEYMRDRAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQ
Sbjct: 181 STGVGPEYMRDRAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQ 240
Query: 241 IEYPPFMIR---------------------------YDIQNGSKDPYEDCVATMRLYMRM 295
IEYPPFMIR YDIQNGSKDPYEDCVATMRLYMRM
Sbjct: 241 IEYPPFMIRDTANYPPLMKTSKLTNSLHYLTQAYLGYDIQNGSKDPYEDCVATMRLYMRM 300
BLAST of Carg04429 vs. NCBI nr
Match:
KAG6602442.1 (hypothetical protein SDJN03_07675, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 592.0 bits (1525), Expect = 2.7e-165
Identity = 291/342 (85.09%), Postives = 291/342 (85.09%), Query Frame = 0
Query: 1 MDHPSETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIG 60
MDHPSETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIG
Sbjct: 1 MDHPSETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIG 60
Query: 61 PRPKQECNN----------------------------------SQITTRFRNMGICDKLT 120
PRPKQECNN SQITT FRN GICDKLT
Sbjct: 61 PRPKQECNNIFVIRGCKICLAIFESPHTLRLHQERCQLRSPNSSQITTPFRNTGICDKLT 120
Query: 121 SDNGRMRRHEAVALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLE 180
SDNGRMRRHEAVALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLE
Sbjct: 121 SDNGRMRRHEAVALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLE 180
Query: 181 STGVGPEYMRDRAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQ 240
STGVGPEYMRD AMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQ
Sbjct: 181 STGVGPEYMRDHAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQ 240
Query: 241 IEYPPFMI--------------RYDIQNGSKDPYEDCVATMRLYMRMRSQVHKIEEYPLA 295
IEYPPFMI RYDIQNGSKDPYEDCVATMRLYMRMRSQVHKIEEYPLA
Sbjct: 241 IEYPPFMIRMKIDNESGAICLCRYDIQNGSKDPYEDCVATMRLYMRMRSQVHKIEEYPLA 300
BLAST of Carg04429 vs. NCBI nr
Match:
XP_022990586.1 (RNA exonuclease 4-like [Cucurbita maxima])
HSP 1 Score: 577.8 bits (1488), Expect = 5.4e-161
Identity = 284/355 (80.00%), Postives = 289/355 (81.41%), Query Frame = 0
Query: 1 MDHPSETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIG 60
MDHPSETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIG
Sbjct: 1 MDHPSETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIG 60
Query: 61 PRPKQECNN----------------------------------SQITTRFRNMGICDKLT 120
P PKQECNN SQI RFRNMGICDKLT
Sbjct: 61 PLPKQECNNIFGTRGCKICLAIFESPHTLRLHQERCQLRSPNFSQIMARFRNMGICDKLT 120
Query: 121 SDNGRMRRHEAVALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLE 180
SDNGRMRRHEAVALACRMVGGGSDGSLDICARVCLIDE ETIIFSTYVNPTLPITNYRLE
Sbjct: 121 SDNGRMRRHEAVALACRMVGGGSDGSLDICARVCLIDEKETIIFSTYVNPTLPITNYRLE 180
Query: 181 STGVGPEYMRDRAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQ 240
STGVGPEY+RD AMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLK+LQ
Sbjct: 181 STGVGPEYLRDHAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKTLQ 240
Query: 241 IEYPPFMIR---------------------------YDIQNGSKDPYEDCVATMRLYMRM 295
IEYPPFMIR YDIQNG+KDPYEDCVATMRLYMRM
Sbjct: 241 IEYPPFMIRDTANYPPLMKTSKLTNSLHYLTQAYLGYDIQNGNKDPYEDCVATMRLYMRM 300
BLAST of Carg04429 vs. NCBI nr
Match:
XP_023543310.1 (RNA exonuclease 4-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 570.9 bits (1470), Expect = 6.6e-159
Identity = 284/355 (80.00%), Postives = 286/355 (80.56%), Query Frame = 0
Query: 1 MDHPSETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIG 60
MDHPSETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIG
Sbjct: 1 MDHPSETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIG 60
Query: 61 PRPKQECNN----------------------------------SQITTRFRNMGICDKLT 120
P PKQECNN SQ RFRNMGI DKLT
Sbjct: 61 PLPKQECNNIFGTRGCKICLAIFESPHTLRLHQERCQLRSPNSSQTMARFRNMGIYDKLT 120
Query: 121 SDNGRMRRHEAVALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLE 180
SDNGRMRRHEAVALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLE
Sbjct: 121 SDNGRMRRHEAVALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLE 180
Query: 181 STGVGPEYMRDRAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQ 240
STGVGPEYMRD AMPLKQV KKI+DILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQ
Sbjct: 181 STGVGPEYMRDHAMPLKQVGKKIEDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQ 240
Query: 241 IEYPPFMIR---------------------------YDIQNGSKDPYEDCVATMRLYMRM 295
IEYPPFMIR YDIQN +KDPYEDCVATMRLYMRM
Sbjct: 241 IEYPPFMIRDTAYYPPLMKTSKLTNSLHYLTQAYLGYDIQNENKDPYEDCVATMRLYMRM 300
BLAST of Carg04429 vs. ExPASy Swiss-Prot
Match:
Q9GZR2 (RNA exonuclease 4 OS=Homo sapiens OX=9606 GN=REXO4 PE=1 SV=2)
HSP 1 Score: 76.6 bits (187), Expect = 5.1e-13
Identity = 49/146 (33.56%), Postives = 79/146 (54.11%), Query Frame = 0
Query: 97 AVALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLESTGVGPEYMR 156
A+AL C MVG G G + ARV ++++ ++ YV PT P+T+YR +G+ PE ++
Sbjct: 243 ALALDCEMVGVGPKGEESMAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLK 302
Query: 157 DRAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQIEYPPFMIRY 216
+ L+ VQK++ ++L K RILVGH L + LK L +++P IR
Sbjct: 303 -QGEELEVVQKEVAEML---------------KGRILVGHALHNDLKVLFLDHPKKKIR- 362
Query: 217 DIQNGSKDPYEDCVATMRLYMRMRSQ 243
D Q P++ V + R +R+ S+
Sbjct: 363 DTQ--KYKPFKSQVKSGRPSLRLLSE 369
BLAST of Carg04429 vs. ExPASy Swiss-Prot
Match:
Q91560 (RNA exonuclease 4 OS=Xenopus laevis OX=8355 GN=rexo4 PE=2 SV=2)
HSP 1 Score: 73.6 bits (179), Expect = 4.3e-12
Identity = 48/160 (30.00%), Postives = 75/160 (46.88%), Query Frame = 0
Query: 56 EHLIGPRPKQECNNSQITTRFRNMGICDKLTSDNGRMRRHEAVALACRMVGGGSDGSLDI 115
E +GP + Q T R+ + L + VA+ C MVG G DG I
Sbjct: 193 EAALGPEAGRVAREMQGITDTRSPTVDKILVKERAFEGLTRTVAMDCEMVGVGMDGEESI 252
Query: 116 CARVCLIDENETIIFSTYVNPTLPITNYRLESTGVGPEYMRDRAMPLKQVQKKIQDILCN 175
ARV +++ ++ YV PT +T+YR +G+ PE ++ + P K VQK++ +IL
Sbjct: 253 LARVSIVNLFGKCVYDKYVKPTERVTDYRTAVSGIRPEDVK-KGEPFKVVQKEVSEIL-- 312
Query: 176 GEPMWKIRPGVGGKARILVGHGLGDHLKSLQIEYPPFMIR 216
+ R LVGH + + LK L +++P IR
Sbjct: 313 -------------RGRTLVGHAVHNDLKILFLDHPKKAIR 336
BLAST of Carg04429 vs. ExPASy Swiss-Prot
Match:
Q6PAQ4 (RNA exonuclease 4 OS=Mus musculus OX=10090 GN=Rexo4 PE=2 SV=2)
HSP 1 Score: 73.2 bits (178), Expect = 5.6e-12
Identity = 41/120 (34.17%), Postives = 66/120 (55.00%), Query Frame = 0
Query: 96 EAVALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLESTGVGPEYM 155
+A+AL C MVG G G I ARV ++++ ++ YV PT P+T+YR +G+ PE +
Sbjct: 252 KALALDCEMVGVGPKGEESIAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENL 311
Query: 156 RDRAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQIEYPPFMIR 215
+ + + V+K++ ++L K RILVGH L + LK L +++P IR
Sbjct: 312 K-QGEEFEVVKKEVAEML---------------KGRILVGHALHNDLKVLFLDHPKKKIR 355
BLAST of Carg04429 vs. ExPASy Swiss-Prot
Match:
O94375 (RNA exonuclease 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rex4 PE=3 SV=1)
HSP 1 Score: 70.9 bits (172), Expect = 2.8e-11
Identity = 51/191 (26.70%), Postives = 86/191 (45.03%), Query Frame = 0
Query: 84 KLTSDNGRMRRHEAVALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNY 143
KLT + +A+ C MVG D + + ARV +++ + +++ TYV P +T++
Sbjct: 80 KLTRKTNLETLGKYIAMDCEMVGVADD--MSVLARVSIVNYHGHVVYDTYVRPKEKVTDW 139
Query: 144 RLESTGVGPEYMRDRAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLK 203
R +GV +MRD A ++VQ ++ IL N R+LVGH + + LK
Sbjct: 140 RTWVSGVKSFHMRD-APSFEKVQAEVAKILDN---------------RVLVGHAVHNDLK 199
Query: 204 SLQIEYPPFMIR----------------------------YDIQNGSKDPYEDCVATMRL 247
L + +P MIR DIQ+G +D ATM L
Sbjct: 200 VLLLSHPRRMIRDTSRFSGYRKLAKGRTPGLKKLAEVILGRDIQSGQHSSVQDAQATMEL 252
BLAST of Carg04429 vs. ExPASy Swiss-Prot
Match:
Q4WHF8 (RNA exonuclease 4 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=rex4 PE=3 SV=1)
HSP 1 Score: 68.9 bits (167), Expect = 1.1e-10
Identity = 53/194 (27.32%), Postives = 89/194 (45.88%), Query Frame = 0
Query: 98 VALACRMVGGGSDGSLD-ICARVCLIDENETIIFSTYVNPTLPITNYRLESTGVGPEYMR 157
VA+ C MVG G + D ARV +++ N ++ +YV P IT++R +G+ P++M
Sbjct: 117 VAMDCEMVGVGPNPDNDSALARVSIVNFNGEQVYDSYVRPKEMITDWRTHVSGISPKHMA 176
Query: 158 DRAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQI--------- 217
+ A L+QVQK + +IL RILVGH + + L +L +
Sbjct: 177 E-ARSLEQVQKDVAEIL---------------DGRILVGHAVSNDLDALLLGHPKRDIRD 236
Query: 218 --EYPPF-----------------MIRYDIQNGSKDPYEDCVATMRLYMRMRSQVHK--I 261
++PP+ + +IQ+G+ ED ATM LY R + + +
Sbjct: 237 TSKHPPYRKIAGGGSPRLKILASEFLGLNIQDGAHSSVEDAKATMLLYRRDKEAFEREHL 294
BLAST of Carg04429 vs. ExPASy TrEMBL
Match:
A0A6J1HBP2 (RNA exonuclease 4 OS=Cucurbita moschata OX=3662 GN=LOC111462538 PE=3 SV=1)
HSP 1 Score: 594.0 bits (1530), Expect = 3.5e-166
Identity = 294/355 (82.82%), Postives = 294/355 (82.82%), Query Frame = 0
Query: 1 MDHPSETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIG 60
MDHPSETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIG
Sbjct: 1 MDHPSETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIG 60
Query: 61 PRPKQECNN----------------------------------SQITTRFRNMGICDKLT 120
PRPKQECNN SQITTRFRNMGICDKLT
Sbjct: 61 PRPKQECNNVFVIRGCKICLAIFESPHTLRLHQERCQLRSPNSSQITTRFRNMGICDKLT 120
Query: 121 SDNGRMRRHEAVALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLE 180
SDNGRMRRHEAVALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLE
Sbjct: 121 SDNGRMRRHEAVALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLE 180
Query: 181 STGVGPEYMRDRAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQ 240
STGVGPEYMRDRAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQ
Sbjct: 181 STGVGPEYMRDRAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQ 240
Query: 241 IEYPPFMIR---------------------------YDIQNGSKDPYEDCVATMRLYMRM 295
IEYPPFMIR YDIQNGSKDPYEDCVATMRLYMRM
Sbjct: 241 IEYPPFMIRDTANYPPLMKTSKLTNSLHYLTQAYLGYDIQNGSKDPYEDCVATMRLYMRM 300
BLAST of Carg04429 vs. ExPASy TrEMBL
Match:
A0A6J1JNC8 (RNA exonuclease 4 OS=Cucurbita maxima OX=3661 GN=LOC111487420 PE=3 SV=1)
HSP 1 Score: 577.8 bits (1488), Expect = 2.6e-161
Identity = 284/355 (80.00%), Postives = 289/355 (81.41%), Query Frame = 0
Query: 1 MDHPSETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIG 60
MDHPSETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIG
Sbjct: 1 MDHPSETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIG 60
Query: 61 PRPKQECNN----------------------------------SQITTRFRNMGICDKLT 120
P PKQECNN SQI RFRNMGICDKLT
Sbjct: 61 PLPKQECNNIFGTRGCKICLAIFESPHTLRLHQERCQLRSPNFSQIMARFRNMGICDKLT 120
Query: 121 SDNGRMRRHEAVALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLE 180
SDNGRMRRHEAVALACRMVGGGSDGSLDICARVCLIDE ETIIFSTYVNPTLPITNYRLE
Sbjct: 121 SDNGRMRRHEAVALACRMVGGGSDGSLDICARVCLIDEKETIIFSTYVNPTLPITNYRLE 180
Query: 181 STGVGPEYMRDRAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQ 240
STGVGPEY+RD AMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLK+LQ
Sbjct: 181 STGVGPEYLRDHAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKTLQ 240
Query: 241 IEYPPFMIR---------------------------YDIQNGSKDPYEDCVATMRLYMRM 295
IEYPPFMIR YDIQNG+KDPYEDCVATMRLYMRM
Sbjct: 241 IEYPPFMIRDTANYPPLMKTSKLTNSLHYLTQAYLGYDIQNGNKDPYEDCVATMRLYMRM 300
BLAST of Carg04429 vs. ExPASy TrEMBL
Match:
A0A2N9IYD2 (C2H2-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57794 PE=4 SV=1)
HSP 1 Score: 454.9 bits (1169), Expect = 2.5e-124
Identity = 219/322 (68.01%), Postives = 247/322 (76.71%), Query Frame = 0
Query: 5 SETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIGPRPK 64
SETLR+KCAACFRQFNK+EHLVEHMR S+HS HEP C +C KHCRSFESLREHLIGP PK
Sbjct: 8 SETLRNKCAACFRQFNKMEHLVEHMRTSYHSAHEPICGICKKHCRSFESLREHLIGPLPK 67
Query: 65 QECN---------------------------------NSQITTRFRNMGICDKLTSDNGR 124
QEC N+ + RF N+GICD L+ DNG
Sbjct: 68 QECKNIFNIRGCKFCLSILDSPNARWIHQERCRFSSINAGLLARFANLGICDNLSIDNGG 127
Query: 125 MRRHEAVALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLESTGVG 184
R + VALA +MVGGG DGSLD+CARVCLIDE+E IIF +YV P +P+TNYR E+TG+
Sbjct: 128 TRGQQVVALAGKMVGGGRDGSLDLCARVCLIDESENIIFHSYVKPPIPVTNYRYETTGIR 187
Query: 185 PEYMRDRAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQIEYPP 244
PEY+RD AMPL+QVQKKIQD LCNGEPMWKIRP V GKARILVGHGL L LQ+EYP
Sbjct: 188 PEYLRD-AMPLRQVQKKIQDFLCNGEPMWKIRPKV-GKARILVGHGLDHDLDRLQVEYPA 247
Query: 245 FMIRYDIQNGSKDPYEDCVATMRLYMRMRSQVHKIEEYPLASDPQNKNNFAIWKQFELER 294
MIRYDIQ G +DPYEDCVATMRLYM M+SQVHKIE+YPLASDPQN+NNFA W+Q ELER
Sbjct: 248 IMIRYDIQTGIQDPYEDCVATMRLYMSMKSQVHKIEDYPLASDPQNRNNFASWRQNELER 307
BLAST of Carg04429 vs. ExPASy TrEMBL
Match:
A0A4Y1R8T1 (RNA exonuclease 4 OS=Prunus dulcis OX=3755 GN=Prudu_010383 PE=3 SV=1)
HSP 1 Score: 439.1 bits (1128), Expect = 1.4e-119
Identity = 221/341 (64.81%), Postives = 246/341 (72.14%), Query Frame = 0
Query: 5 SETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIGPRPK 64
SETLR+KCAAC+RQFNKIEHLVEHMR S+HS HEPTC +C KHCRSFESLREHLIGP PK
Sbjct: 20 SETLRNKCAACYRQFNKIEHLVEHMRTSYHSAHEPTCGICKKHCRSFESLREHLIGPLPK 79
Query: 65 QECN---------------------------------NSQITTRFRNMGICDKLTSDNGR 124
QEC N+ + RF N+GI D ++NG
Sbjct: 80 QECRNIFSTRGCKFCLAILDSPYALRVHQDRCQLSGVNAGLLGRFANLGIRD--NTENGS 139
Query: 125 MRRHEAVALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLESTGVG 184
R + VALAC+MVGGGSDGSLD+CA+VCLIDE E IIF +YV P LP+TNYR E+TG+
Sbjct: 140 TRGTQVVALACKMVGGGSDGSLDLCAKVCLIDEYENIIFQSYVKPLLPVTNYRYETTGIR 199
Query: 185 PEYMRDRAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQIEYPP 244
PEY+RD AMPL+QVQKKIQD LCNGEPMWKIRP GGKARILVGHGL L SLQ+EYP
Sbjct: 200 PEYLRD-AMPLRQVQKKIQDFLCNGEPMWKIRPR-GGKARILVGHGLDHDLDSLQVEYPQ 259
Query: 245 FMIR-------------------YDIQNGSKDPYEDCVATMRLYMRMRSQVHKIEEYPLA 294
MIR YDIQ G +DPYEDCVATM+LYMRMRSQVHK E YPLA
Sbjct: 260 VMIRDTAKYPPLMKTSKLSNSLKYDIQTGIQDPYEDCVATMKLYMRMRSQVHKTEAYPLA 319
BLAST of Carg04429 vs. ExPASy TrEMBL
Match:
A0A7N2KZJ0 (RNA exonuclease 4 OS=Quercus lobata OX=97700 PE=3 SV=1)
HSP 1 Score: 438.7 bits (1127), Expect = 1.9e-119
Identity = 217/349 (62.18%), Postives = 248/349 (71.06%), Query Frame = 0
Query: 5 SETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIGPRPK 64
SETLR+KC ACF+QFNK+EHLVEHMR S+HS+HEP C +C KHCRSFESLREHLIGP PK
Sbjct: 8 SETLRNKCVACFKQFNKMEHLVEHMRTSYHSVHEPICGICKKHCRSFESLREHLIGPLPK 67
Query: 65 QECN---------------------------------NSQITTRFRNMGICDKLTSDNGR 124
QEC NS + RF N+GI D LT +NG
Sbjct: 68 QECKNIFNIRGCKFCLAILDSPNARCFHQERCQFSSINSGLLARFANLGIRDNLTVENGG 127
Query: 125 MRRHEAVALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLESTGVG 184
R + VALAC+MVGGGSDGSLD+CARVCLIDE+E IIF TYV P +P+TNYR E+TG+
Sbjct: 128 TRGPQVVALACKMVGGGSDGSLDLCARVCLIDESENIIFHTYVKPPIPVTNYRYETTGIR 187
Query: 185 PEYMRDRAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQIEYPP 244
PEY+RD AMPL+QVQ+KIQD LCNGEPMWKIRP GGKARILVGHGL L LQ+EYP
Sbjct: 188 PEYLRD-AMPLRQVQRKIQDFLCNGEPMWKIRP-KGGKARILVGHGLDHDLDRLQVEYPA 247
Query: 245 FMIR---------------------------YDIQNGSKDPYEDCVATMRLYMRMRSQVH 294
M+R YDIQ G +DPYEDCVAT+RL+MRMRSQVH
Sbjct: 248 IMMRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQTGIQDPYEDCVATLRLFMRMRSQVH 307
BLAST of Carg04429 vs. TAIR 10
Match:
AT3G27970.1 (Exonuclease family protein )
HSP 1 Score: 395.6 bits (1015), Expect = 3.5e-110
Identity = 198/348 (56.90%), Postives = 234/348 (67.24%), Query Frame = 0
Query: 5 SETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIGPRPK 64
SETLR+KCAAC+RQFNK+EHLVEHM++S+HS HEPTC +C KHCRSFESLREHLIGP PK
Sbjct: 10 SETLRNKCAACYRQFNKLEHLVEHMKISYHSGHEPTCGVCKKHCRSFESLREHLIGPLPK 69
Query: 65 QECN---------------------------------NSQITTRFRNMGICDKLTSDNGR 124
QEC NS +TTR +G+ DK D
Sbjct: 70 QECKNIFSLRGCRFCMTILESPNSRRIHQERCQFSSVNSGLTTRMAALGLRDKAMIDYTS 129
Query: 125 MRRHEAVALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLESTGVG 184
R VAL+C+MVGGGSDGSLD+CARVC+ DE++ +IF TYV P++ +T+YR E+TG+
Sbjct: 130 SRSPRVVALSCKMVGGGSDGSLDLCARVCITDESDNVIFHTYVKPSMAVTSYRYETTGIR 189
Query: 185 PEYMRDRAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQIEYPP 244
PE +RD AMPLKQVQ+KIQ+ LCNGEPMWKIRP GGKARILVGHGL L LQ+EYP
Sbjct: 190 PENLRD-AMPLKQVQRKIQEFLCNGEPMWKIRPR-GGKARILVGHGLDHDLDRLQLEYPS 249
Query: 245 FMIR---------------------------YDIQNGSKDPYEDCVATMRLYMRMRSQVH 293
MIR YD+ G +DPYEDCVATMRLY RMR Q H
Sbjct: 250 SMIRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDVHFGIQDPYEDCVATMRLYTRMRYQKH 309
BLAST of Carg04429 vs. TAIR 10
Match:
AT5G40310.1 (Exonuclease family protein )
HSP 1 Score: 388.3 bits (996), Expect = 5.6e-108
Identity = 193/347 (55.62%), Postives = 229/347 (65.99%), Query Frame = 0
Query: 6 ETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIGPRPKQ 65
+T R+KC C+RQFNK EHLVEHMR+S+HS+HEPTC +C+KHCRSF+SLREHLIGP PKQ
Sbjct: 2 DTCRNKCGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLREHLIGPLPKQ 61
Query: 66 ECNN---------------------------------SQITTRFRNMGICDKLTSDNGRM 125
EC N S + R +G+ + T D
Sbjct: 62 ECKNIFSIRGCRFCLTILESPNARRIHQERCQLSNVTSGLMIRMAALGLRNNSTIDYTSS 121
Query: 126 RRHEAVALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLESTGVGP 185
R VAL+C+MVGGGSDGSLD+CARVC+ DE+E ++F TYV PT+P+TNYR E TG+ P
Sbjct: 122 RSPRVVALSCKMVGGGSDGSLDLCARVCITDESENVVFHTYVKPTIPVTNYRYEMTGIRP 181
Query: 186 EYMRDRAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQIEYPPF 245
E +RD AM LK Q+K+Q+ LCNGEPMWKIRP GKARILVGHGL +HL SLQ+EY
Sbjct: 182 ENLRD-AMRLKHAQRKVQEFLCNGEPMWKIRPR-NGKARILVGHGLDNHLDSLQLEYSSS 241
Query: 246 MIR---------------------------YDIQNGSKDPYEDCVATMRLYMRMRSQVHK 293
MIR YDI G +DPYEDCVATMRLY RMR Q H+
Sbjct: 242 MIRDTAEYPPLMKSSKLSNSLKYLTQAYLGYDIHVGIQDPYEDCVATMRLYTRMRYQKHR 301
BLAST of Carg04429 vs. TAIR 10
Match:
AT2G48100.1 (Exonuclease family protein )
HSP 1 Score: 231.9 bits (590), Expect = 6.7e-61
Identity = 127/341 (37.24%), Postives = 184/341 (53.96%), Query Frame = 0
Query: 7 TLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIGPRPKQE 66
++RH+C AC++ FN+ EHLVEHM++S+HSLH+P C +C KHC+SFES+REHL P +
Sbjct: 14 SVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSK 73
Query: 67 CNNSQITTRFRNMGICDKLTSDNGRMRRH-----------------------------EA 126
N I T+ R +C ++ + + H +A
Sbjct: 74 GNCKAIFTK-RGCTLCLQIFEEAFALAEHKNKCHLSPPRPLGTSTQRNPSSSLAGSRLKA 133
Query: 127 VALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLESTGVGPEYMRD 186
+AL C MVGGG+DG++D CA VCL+D++E +IFST+V P LP+T+YR E TG+ E ++D
Sbjct: 134 MALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTKEDLKD 193
Query: 187 RAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQIEYPPFMIR-- 246
MPL+ V++++ LC G+ G +LVGH L + L++EYP ++R
Sbjct: 194 -GMPLEHVRERVFSFLCGGQ-------NDGAGRLLLVGHDLRHDMSCLKLEYPSHLLRDT 253
Query: 247 -------------------------YDIQNGSKDPYEDCVATMRLYMRMRSQVHKIEEYP 292
Y IQ G + YEDCV+ MRLY RMR Q H
Sbjct: 254 AKYVPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAMRLYKRMRDQEH------ 313
BLAST of Carg04429 vs. TAIR 10
Match:
AT2G48100.2 (Exonuclease family protein )
HSP 1 Score: 231.9 bits (590), Expect = 6.7e-61
Identity = 127/341 (37.24%), Postives = 184/341 (53.96%), Query Frame = 0
Query: 7 TLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIGPRPKQE 66
++RH+C AC++ FN+ EHLVEHM++S+HSLH+P C +C KHC+SFES+REHL P +
Sbjct: 14 SVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSK 73
Query: 67 CNNSQITTRFRNMGICDKLTSDNGRMRRH-----------------------------EA 126
N I T+ R +C ++ + + H +A
Sbjct: 74 GNCKAIFTK-RGCTLCLQIFEEAFALAEHKNKCHLSPPRPLGTSTQRNPSSSLAGSRLKA 133
Query: 127 VALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLESTGVGPEYMRD 186
+AL C MVGGG+DG++D CA VCL+D++E +IFST+V P LP+T+YR E TG+ E ++D
Sbjct: 134 MALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTKEDLKD 193
Query: 187 RAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQIEYPPFMIR-- 246
MPL+ V++++ LC G+ G +LVGH L + L++EYP ++R
Sbjct: 194 -GMPLEHVRERVFSFLCGGQ-------NDGAGRLLLVGHDLRHDMSCLKLEYPSHLLRDT 253
Query: 247 -------------------------YDIQNGSKDPYEDCVATMRLYMRMRSQVHKIEEYP 292
Y IQ G + YEDCV+ MRLY RMR Q H
Sbjct: 254 AKYVPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAMRLYKRMRDQEH------ 313
BLAST of Carg04429 vs. TAIR 10
Match:
AT2G48100.3 (Exonuclease family protein )
HSP 1 Score: 231.9 bits (590), Expect = 6.7e-61
Identity = 127/341 (37.24%), Postives = 184/341 (53.96%), Query Frame = 0
Query: 7 TLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIGPRPKQE 66
++RH+C AC++ FN+ EHLVEHM++S+HSLH+P C +C KHC+SFES+REHL P +
Sbjct: 14 SVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSK 73
Query: 67 CNNSQITTRFRNMGICDKLTSDNGRMRRH-----------------------------EA 126
N I T+ R +C ++ + + H +A
Sbjct: 74 GNCKAIFTK-RGCTLCLQIFEEAFALAEHKNKCHLSPPRPLGTSTQRNPSSSLAGSRLKA 133
Query: 127 VALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLESTGVGPEYMRD 186
+AL C MVGGG+DG++D CA VCL+D++E +IFST+V P LP+T+YR E TG+ E ++D
Sbjct: 134 MALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTKEDLKD 193
Query: 187 RAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQIEYPPFMIR-- 246
MPL+ V++++ LC G+ G +LVGH L + L++EYP ++R
Sbjct: 194 -GMPLEHVRERVFSFLCGGQ-------NDGAGRLLLVGHDLRHDMSCLKLEYPSHLLRDT 253
Query: 247 -------------------------YDIQNGSKDPYEDCVATMRLYMRMRSQVHKIEEYP 292
Y IQ G + YEDCV+ MRLY RMR Q H
Sbjct: 254 AKYVPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAMRLYKRMRDQEH------ 313
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7033124.1 | 1.7e-175 | 100.00 | RNA exonuclease 4, partial [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_022961916.1 | 7.2e-166 | 82.82 | RNA exonuclease 4-like [Cucurbita moschata] | [more] |
KAG6602442.1 | 2.7e-165 | 85.09 | hypothetical protein SDJN03_07675, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022990586.1 | 5.4e-161 | 80.00 | RNA exonuclease 4-like [Cucurbita maxima] | [more] |
XP_023543310.1 | 6.6e-159 | 80.00 | RNA exonuclease 4-like [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Q9GZR2 | 5.1e-13 | 33.56 | RNA exonuclease 4 OS=Homo sapiens OX=9606 GN=REXO4 PE=1 SV=2 | [more] |
Q91560 | 4.3e-12 | 30.00 | RNA exonuclease 4 OS=Xenopus laevis OX=8355 GN=rexo4 PE=2 SV=2 | [more] |
Q6PAQ4 | 5.6e-12 | 34.17 | RNA exonuclease 4 OS=Mus musculus OX=10090 GN=Rexo4 PE=2 SV=2 | [more] |
O94375 | 2.8e-11 | 26.70 | RNA exonuclease 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=2848... | [more] |
Q4WHF8 | 1.1e-10 | 27.32 | RNA exonuclease 4 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 10... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HBP2 | 3.5e-166 | 82.82 | RNA exonuclease 4 OS=Cucurbita moschata OX=3662 GN=LOC111462538 PE=3 SV=1 | [more] |
A0A6J1JNC8 | 2.6e-161 | 80.00 | RNA exonuclease 4 OS=Cucurbita maxima OX=3661 GN=LOC111487420 PE=3 SV=1 | [more] |
A0A2N9IYD2 | 2.5e-124 | 68.01 | C2H2-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5779... | [more] |
A0A4Y1R8T1 | 1.4e-119 | 64.81 | RNA exonuclease 4 OS=Prunus dulcis OX=3755 GN=Prudu_010383 PE=3 SV=1 | [more] |
A0A7N2KZJ0 | 1.9e-119 | 62.18 | RNA exonuclease 4 OS=Quercus lobata OX=97700 PE=3 SV=1 | [more] |