Carg04378 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATACCTTCCTTTTACTTTCCCTTCACAACTCTCTCTCTAGCTGCCTTATGGATCATCCTAAAATCTTCCCAATTCTTCTCCTTCTCTTCATCATTCTTGGTACACAAACAAATTTCCCATGTTTTTCTTCTATGTTCACTCCCTTGATTCTCATAGTTCTTCATTTTGTCTTCAGGGTTTGGCGTGGGAGCGATGGAAGCAGCGGCACATCCCGGCTATGATACCAGTTCATCGCAAAAGGTAAGCTTTTTGGAAGCCTAGAAATGGAGTTTTTGGAAGATATTGGTGTAATTAACGAAGGGGTTTGTTTGTGTTGGCAGAAGAGTGGGGGCAAGCCCAGGAAAGTGATGATGGAAGTGATGGACTATGCAGATCCAGGCCCAAATACCAATACAAGAAGTGGCTATCTCACCCCCCCTTCTTCCCCTCCTCTGCCGCCCTCTTCATGAATCTCAAATAATGATTTCTTCTCTGTTCTTCGTTTCTCATATCATATTCTAACTTCCAAGTGTAAGGAATTGCACCTTTTGCTGTCAGATTTCCAGTAATTTGCTTCTAATATTCGATCAAATAATTACATTATTTTATGATTAATTATAACTTGGGTTTTGTGCCATACTAATAAACT CATACCTTCCTTTTACTTTCCCTTCACAACTCTCTCTCTAGCTGCCTTATGGATCATCCTAAAATCTTCCCAATTCTTCTCCTTCTCTTCATCATTCTTGGGTTTGGCGTGGGAGCGATGGAAGCAGCGGCACATCCCGGCTATGATACCAGTTCATCGCAAAAGAAGAGTGGGGGCAAGCCCAGGAAAGTGATGATGGAAGTGATGGACTATGCAGATCCAGGCCCAAATACCAATACAAGAAGTGGCTATCTCACCCCCCCTTCTTCCCCTCCTCTGCCGCCCTCTTCATGAATCTCAAATAATGATTTCTTCTCTGTTCTTCGTTTCTCATATCATATTCTAACTTCCAAGTGTAAGGAATTGCACCTTTTGCTGTCAGATTTCCAGTAATTTGCTTCTAATATTCGATCAAATAATTACATTATTTTATGATTAATTATAACTTGGGTTTTGTGCCATACTAATAAACT ATGGATCATCCTAAAATCTTCCCAATTCTTCTCCTTCTCTTCATCATTCTTGGGTTTGGCGTGGGAGCGATGGAAGCAGCGGCACATCCCGGCTATGATACCAGTTCATCGCAAAAGAAGAGTGGGGGCAAGCCCAGGAAAGTGATGATGGAAGTGATGGACTATGCAGATCCAGGCCCAAATACCAATACAAGAAGTGGCTATCTCACCCCCCCTTCTTCCCCTCCTCTGCCGCCCTCTTCATGA MDHPKIFPILLLLFIILGFGVGAMEAAAHPGYDTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLPPSS Homology
BLAST of Carg04378 vs. NCBI nr
Match: KAG6602500.1 (hypothetical protein SDJN03_07733, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033174.1 hypothetical protein SDJN02_07228 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 164.1 bits (414), Expect = 5.1e-37 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of Carg04378 vs. NCBI nr
Match: XP_023527249.1 (uncharacterized protein LOC111790540 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 142.9 bits (359), Expect = 1.2e-30 Identity = 73/78 (93.59%), Postives = 73/78 (93.59%), Query Frame = 0
BLAST of Carg04378 vs. NCBI nr
Match: XP_023527257.1 (uncharacterized protein LOC111790540 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 136.3 bits (342), Expect = 1.1e-28 Identity = 72/78 (92.31%), Postives = 72/78 (92.31%), Query Frame = 0
BLAST of Carg04378 vs. NCBI nr
Match: KGN52468.1 (hypothetical protein Csa_007886 [Cucumis sativus]) HSP 1 Score: 75.5 bits (184), Expect = 2.4e-10 Identity = 47/85 (55.29%), Postives = 55/85 (64.71%), Query Frame = 0
BLAST of Carg04378 vs. NCBI nr
Match: KAA0039487.1 (hypothetical protein E6C27_scaffold64G003070 [Cucumis melo var. makuwa] >TYK15242.1 hypothetical protein E5676_scaffold892G00160 [Cucumis melo var. makuwa]) HSP 1 Score: 61.6 bits (148), Expect = 3.6e-06 Identity = 32/53 (60.38%), Postives = 37/53 (69.81%), Query Frame = 0
BLAST of Carg04378 vs. ExPASy TrEMBL
Match: A0A0A0KSB7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636600 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.2e-10 Identity = 47/85 (55.29%), Postives = 55/85 (64.71%), Query Frame = 0
BLAST of Carg04378 vs. ExPASy TrEMBL
Match: A0A5D3CUT5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00160 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.7e-06 Identity = 32/53 (60.38%), Postives = 37/53 (69.81%), Query Frame = 0
BLAST of Carg04378 vs. ExPASy TrEMBL
Match: A0A7J7NY32 (Uncharacterized protein OS=Kingdonia uniflora OX=39325 GN=GIB67_007365 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 4.2e-05 Identity = 38/72 (52.78%), Postives = 44/72 (61.11%), Query Frame = 0
BLAST of Carg04378 vs. ExPASy TrEMBL
Match: A0A540K4V3 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_045201 PE=4 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 8.0e-04 Identity = 36/70 (51.43%), Postives = 42/70 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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