
Carg04293 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTCGAATTCTGCTCACAAATCATTCGTAATTCTTCCATTGCAGTTTCTTCCGGCGAGAATTCGCTTCCTTCTGCCACCGGAATAACCTTCTCTTTCTTATCCACTGCCGGAAGTTTCGTCGGAGTGGCTGATCAGAGAACCTACTCACTGGTGCTCGATCTCACTCTTTGGTTTCGTCTACCGGAGCTTTCGTAGCTGGAGCAAGGGATAGGAAGCTTGGGCTAGGGAATTTCTGCTCCGGTGGCCACTACGATACTGTAAGTTTTGAATAGTGAAATTATGGCCGAACTGTACTGTTGATTTCTTGAATCTTTGACATCTTGAATACTTGAAAGATCGGGAAACAGCTTCCAATTGGGAGTTTTTTTTTTTTAGCTGTTTGGTTGTTGATTCTAATTTAAGTCTTTATGAATTGTTGGTAATTCAGGATTTCGTTCTCTTTTACTGTATTCTGGATGCAATTGACTGGGGATAGTGTTTTTTTTGGGGGTGGGGTGGGGTTGGGGCGGTTCAGATGTTTGGGATAATACAGAAACTACAACATGGCCCTCCACTGTTCCTCAATTTTGTAACATTTTCGCTTTGATTAAAGGCAGTCAAAGTTTGGAAGAGAGAGGTTGGAATCATGCCCTAGTTTTTGTAGAGAATTGTAAAAATCAATTAACTATGACCACTTGTACTACTATAGCATCTGGAGGCGTACATACTATGATATTTTCTACAGCCCCGTGGATTAGTGTGTAGAAACTAAAAGTTCATTTCGGAAGTTAGAGTGACATGGTTTCCTTCTATTCCAACAGAAACAAAATACTTTGAGGAATAGGTGAAATTGACATGCTGGATGTTGCTACCGGTTGGTGGATTAGGCATGAATACCTCAATGGATGATATGAACTTGATTCAGCAGGCACAGAGGCATCACTTGGTAGTTCGAGAGCTTGGAGAAGAGATTGATTTGGAAATTGGACCTGGAGATGACGACCCCTCATTTGCTAGCACTCCTATAATAGGTGGACCAGCACGAGAACCATCTGCAGAAGATCATGATGAGAGTAAGCATGTGGTATTGATTTCTCAACTTTCCAATGATGATCAAGATATGTCAAAGACACAACCAGCCAAAAGGAAAAAGAAGGTTGTGAAAAGATGGAGGGAGGAATGGGCTGATACATATAAATGGGCTTACGTTGATGTGAAGGATGGAACTGCCAGGATCTTTTGCTCTGTTTGTAAGGAGTATGGCAGGAAGCACAGGAGAAATCCTTATGGAAATGAAGGCAGCCGAAACATGCAGATGAGTGCACTTGAAGAACACAACAACAGTCTACTTCATAAAGAGGCTCTTCGGCTTCAGATGGCCTCCAAGGACAAGATTATTGTTGATAAACCTATTTATGTAAAAGGTAGGGGTTCTCCACATTTTTTATGTTCTTTATGTTATTTCTCCCCAATCTTTGGGTGAAATTAGGTTTTCAATTTTGGAGGGCCATGTTCAATTGACAGAAAAGACAATATTCTCGAGACTTCTAGTTGATCCCTTGTACTCAAGATGATGAAATTAACATTTTAAAGATTGGTGCTTGTGTGTGCATTTTACCATTCTCGTACGTGCTTGCATTAAATAAATAGAAGCCTTTTTCATAATATTTTCTTACACTTGTCCTTTTATGGCTATTATCTTCAAACAAAGCTCTCATGTCAAAAACTGCTGGATCAATCATTGAAGCTGCACTAAAAAGGGATCCTCATGAAGTTGAGTTCATACAAGCAGTACAAGAAGCAGTACATGCCTTAGAACGGGTTATTGCAAAAAATGCTCAGTAAGTTCACCTTGAAGATTTTTTTTTGTAACCCACCTTTAGGTGTTGGAAGTTCTTACTCCTTTATTGATGAACATTTATCAATGAAATTTGTTTCTCTTCCAAAAAAACGTTTACCTTGAATATAAAATTTTGTAATGCTCTGTTATTCATAGTTAAAGAGTGGGAATTATATGTCTTAAAAATCAGCTATGTCAACATTATGGAGCGCTTATTAGAACCTGAACGCATGGTTCTTTTCCGAGTTCCATGGGTCGATGACAGAGGTGAGACACATGTCAATCGAGGCTTTCGAGTTCAATTTAACCAGGCCTTGGGCCCTTGTAGGGGTGGTCTTCGTTTTCATCCATTGATGAACTTAAGCATCGCCAAGTTTCTTGGTTTTGAACAGGTAAGGAACTGAATGCTGGTATTCTCCTTCTATTTTAGTACGAATGTTGTGTTGTTAAATACCAGACATCAGTATGGATCAGGTCAAATTTTATTATAAGTGGATAACGGCTGATTTTATTCTCTTGGGGTTACTGCATATTTCTTTGATGTGAAAGATTATTTGATGTTTTGAAGCGCAAATGGCCAAGTTTTAGGGAATAGTGATTTGTGATTATGCATTGCAAAGTAGTCAATAAGGTTTCTTCGTGATGAAATTTAGAACATGGGCTGGTTGCTTTCTAAGAGACATGAGAGAACAGTTTAAACATACCCTAGTTGATTTCCTATTTTCATTTCTTCTTAATTTTATATGGATTCATGGTCCATTAATTTGGTGTGTGTGTGTGTGTGTGTGTGGGTGGGTGGGATGGGTGGGGGGGGGGGGGGGGGGTGTTTGAGAAATACTTTTTCTTAAAAGCAAACATTACCATAAAGGTCACAATATATCCTCTTTAGGACCAAAATCATCCAAATGGATGAAAGTTTTCTCCACACTCAGGGTGGTGCTCCCCACTGAAACAAATTACATTCTACTTCTTGTATTATATCAGCTTGAAAAGAATTAATTGTCTTAATAAAGATTCTCTTCTTGAATATGAAGTAAAACAGCTGCTCACATTCCTAAGAAAGAATGACAATCAAAATTCTAACAGATTCGTCATATGTGTACATCCTACAAAGTATGCACCAAACTGCTGTCTTTGAGGTGAAATGAAGATAACAGACTAGTAAGTCAAAATTTTCTTAAGATAAGACACAAATTACAACATGGTGGGCTTTGTGCAAAAATGAGGAGGTGACTCAGTGTAACCTTTTCCTTGCTTGGATGCAGCATGGTTTTGGAAATCCTTGGTGAAGTCTTTCATGTGGAAAACAGCCATTCCTAGACGTGTCAAAGGCCTGCTTCTCTTATTCTTGGCAGTTATTCTTTCAAAAAGGAATCTAAAATTTTGGCCTAATCTTACAAGAGCTTTTAATTGGTCCCTTCAGCTCGAGAGAAAAAGAAAAAGTTCTTTGGGATAAGAGGGGTTTTTATGTGTTTTTGGGGATGAGGCAGTTTTTTTCTGTTCCCTTCGTGCAGTCCCTATAATTTTTTTTTTTTTTTTTAACACTTACGACATCATTTCTTTATATGATAGTTGGAATAATTTTTTATTACTTGCCACTGTGAGACTCTCTCTCCCCATCTTCTGTAAATATCTTGTCTTCAACGAAGTTTGTTTCTCACAAAATCTTCTGTCCATCTACAGACTTTGAAAAATGCATTATCACCCTACAAATTAGGAGGGGCAGCAGGTGGAAGTGATTTTGATCCAAGGGGAAAAAGTGATAATGAGGTGAACTGTATACTGTTATATGATGTCATCTATCTTTTACACTTCCATAAATTTTAAAAGCCTCTAATAAATTAGCAGATTATGCGCTTTTGTCAAAGTTTCATAAACGAGATATATCGCTACTTAGGCCCTGATAAGGTAAATGGAAAAAATTGGTTTTTTATTCTTTTAATACCCACATAAATTTTCAGTTTAGAACTTTAGTATATAATAATATGCTAAATTGTAATTCTTGCCAGGACCTTCCTTCTGAGGAGATGGGTGTTGGTATGCGAGAAATGGGATATCTTTTTGGACAATATCGACGGTTAGCAGGTCATTTTGAGGTACTTTAAAACTCTTACGTATAAAAAAAAAAAAAAAAACTCATTTTTCACGTCTAATGTTAATAATGGAATATAAAGGGCAAAAACAGAATGTGTATCTTGTGCTCTGCTTCTCATTATATTCTTCTGGAATTTAAAGGAAGTGACATATTGGGATGAATTTTAAGAAAGATTATTCAGAAAGAATTATTAGTTTTTTAATGGATCTATAAAATAATTTTAGAACCTGTTGTGGACTTGATACACATGAGCATGACGTGCTCAACAACTTATCATACATTTCAGATTGCACTGTGAATGAATTTCATTATAAGGTTATATACTTAAGTTATATGTTGTGGATTCTTACTTATGCAGGGAAGTTTTACAGGACCGAGGATATTTTGGTCTGGGTCTAGCCTCCGAACAGAAGCTACTGGCTATGGTCTGGTAAATAACATCCCATCTTTTTTTATGCTCTATCTATATGGTGGACAGGTTTCAATGGGTTCAGATACAGTCTGA CTCGAATTCTGCTCACAAATCATTCGTAATTCTTCCATTGCAGTTTCTTCCGGCGAGAATTCGCTTCCTTCTGCCACCGGAATAACCTTCTCTTTCTTATCCACTGCCGGAAGTTTCGTCGGAGTGGCTGATCAGAGAACCTACTCACTGGTGCTCGATCTCACTCTTTGGTTTCGTCTACCGGAGCTTTCGTAGCTGGAGCAAGGGATAGGAAGCTTGGGCTAGGGAATTTCTGCTCCGGTGGCCACTACGATACTAAACAAAATACTTTGAGGAATAGGTGAAATTGACATGCTGGATGTTGCTACCGGTTGGTGGATTAGGCATGAATACCTCAATGGATGATATGAACTTGATTCAGCAGGCACAGAGGCATCACTTGGTAGTTCGAGAGCTTGGAGAAGAGATTGATTTGGAAATTGGACCTGGAGATGACGACCCCTCATTTGCTAGCACTCCTATAATAGGTGGACCAGCACGAGAACCATCTGCAGAAGATCATGATGAGAGTAAGCATGTGGTATTGATTTCTCAACTTTCCAATGATGATCAAGATATGTCAAAGACACAACCAGCCAAAAGGAAAAAGAAGGTTGTGAAAAGATGGAGGGAGGAATGGGCTGATACATATAAATGGGCTTACGTTGATGTGAAGGATGGAACTGCCAGGATCTTTTGCTCTGTTTGTAAGGAGTATGGCAGGAAGCACAGGAGAAATCCTTATGGAAATGAAGGCAGCCGAAACATGCAGATGAGTGCACTTGAAGAACACAACAACAGTCTACTTCATAAAGAGGCTCTTCGGCTTCAGATGGCCTCCAAGGACAAGATTATTGTTGATAAACCTATTTATGTAAAAGCTCTCATGTCAAAAACTGCTGGATCAATCATTGAAGCTGCACTAAAAAGGGATCCTCATGAAGTTGAGTTCATACAAGCAGTACAAGAAGCAGTACATGCCTTAGAACGGGTTATTGCAAAAAATGCTCACTATGTCAACATTATGGAGCGCTTATTAGAACCTGAACGCATGGTTCTTTTCCGAGTTCCATGGGTCGATGACAGAGGTGAGACACATGTCAATCGAGGCTTTCGAGTTCAATTTAACCAGGCCTTGGGCCCTTGTAGGGGTGGTCTTCGTTTTCATCCATTGATGAACTTAAGCATCGCCAAGTTTCTTGGTTTTGAACAGACTTTGAAAAATGCATTATCACCCTACAAATTAGGAGGGGCAGCAGGTGGAAGTGATTTTGATCCAAGGGGAAAAAGTGATAATGAGATTATGCGCTTTTGTCAAAGTTTCATAAACGAGATATATCGCTACTTAGGCCCTGATAAGGACCTTCCTTCTGAGGAGATGGGTGTTGGTATGCGAGAAATGGGATATCTTTTTGGACAATATCGACGGTTAGCAGGTCATTTTGAGGGAAGTTTTACAGGACCGAGGATATTTTGGTCTGGGTCTAGCCTCCGAACAGAAGCTACTGGCTATGGTCTGGTAAATAACATCCCATCTTTTTTTATGCTCTATCTATATGGTGGACAGGTTTCAATGGGTTCAGATACAGTCTGA ATGTTGCTACCGGTTGGTGGATTAGGCATGAATACCTCAATGGATGATATGAACTTGATTCAGCAGGCACAGAGGCATCACTTGGTAGTTCGAGAGCTTGGAGAAGAGATTGATTTGGAAATTGGACCTGGAGATGACGACCCCTCATTTGCTAGCACTCCTATAATAGGTGGACCAGCACGAGAACCATCTGCAGAAGATCATGATGAGAGTAAGCATGTGGTATTGATTTCTCAACTTTCCAATGATGATCAAGATATGTCAAAGACACAACCAGCCAAAAGGAAAAAGAAGGTTGTGAAAAGATGGAGGGAGGAATGGGCTGATACATATAAATGGGCTTACGTTGATGTGAAGGATGGAACTGCCAGGATCTTTTGCTCTGTTTGTAAGGAGTATGGCAGGAAGCACAGGAGAAATCCTTATGGAAATGAAGGCAGCCGAAACATGCAGATGAGTGCACTTGAAGAACACAACAACAGTCTACTTCATAAAGAGGCTCTTCGGCTTCAGATGGCCTCCAAGGACAAGATTATTGTTGATAAACCTATTTATGTAAAAGCTCTCATGTCAAAAACTGCTGGATCAATCATTGAAGCTGCACTAAAAAGGGATCCTCATGAAGTTGAGTTCATACAAGCAGTACAAGAAGCAGTACATGCCTTAGAACGGGTTATTGCAAAAAATGCTCACTATGTCAACATTATGGAGCGCTTATTAGAACCTGAACGCATGGTTCTTTTCCGAGTTCCATGGGTCGATGACAGAGGTGAGACACATGTCAATCGAGGCTTTCGAGTTCAATTTAACCAGGCCTTGGGCCCTTGTAGGGGTGGTCTTCGTTTTCATCCATTGATGAACTTAAGCATCGCCAAGTTTCTTGGTTTTGAACAGACTTTGAAAAATGCATTATCACCCTACAAATTAGGAGGGGCAGCAGGTGGAAGTGATTTTGATCCAAGGGGAAAAAGTGATAATGAGATTATGCGCTTTTGTCAAAGTTTCATAAACGAGATATATCGCTACTTAGGCCCTGATAAGGACCTTCCTTCTGAGGAGATGGGTGTTGGTATGCGAGAAATGGGATATCTTTTTGGACAATATCGACGGTTAGCAGGTCATTTTGAGGGAAGTTTTACAGGACCGAGGATATTTTGGTCTGGGTCTAGCCTCCGAACAGAAGCTACTGGCTATGGTCTGGTAAATAACATCCCATCTTTTTTTATGCTCTATCTATATGGTGGACAGGTTTCAATGGGTTCAGATACAGTCTGA MLLPVGGLGMNTSMDDMNLIQQAQRHHLVVRELGEEIDLEIGPGDDDPSFASTPIIGGPAREPSAEDHDESKHVVLISQLSNDDQDMSKTQPAKRKKKVVKRWREEWADTYKWAYVDVKDGTARIFCSVCKEYGRKHRRNPYGNEGSRNMQMSALEEHNNSLLHKEALRLQMASKDKIIVDKPIYVKALMSKTAGSIIEAALKRDPHEVEFIQAVQEAVHALERVIAKNAHYVNIMERLLEPERMVLFRVPWVDDRGETHVNRGFRVQFNQALGPCRGGLRFHPLMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPRGKSDNEIMRFCQSFINEIYRYLGPDKDLPSEEMGVGMREMGYLFGQYRRLAGHFEGSFTGPRIFWSGSSLRTEATGYGLVNNIPSFFMLYLYGGQVSMGSDTV Homology
BLAST of Carg04293 vs. NCBI nr
Match: KAG7036448.1 (hypothetical protein SDJN02_00065 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 862.1 bits (2226), Expect = 2.1e-246 Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0
BLAST of Carg04293 vs. NCBI nr
Match: XP_023523587.1 (NADP-specific glutamate dehydrogenase-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023523588.1 NADP-specific glutamate dehydrogenase-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 812.8 bits (2098), Expect = 1.4e-231 Identity = 400/401 (99.75%), Postives = 400/401 (99.75%), Query Frame = 0
BLAST of Carg04293 vs. NCBI nr
Match: XP_023523590.1 (NADP-specific glutamate dehydrogenase-like isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 812.8 bits (2098), Expect = 1.4e-231 Identity = 400/401 (99.75%), Postives = 400/401 (99.75%), Query Frame = 0
BLAST of Carg04293 vs. NCBI nr
Match: XP_022948831.1 (NADP-specific glutamate dehydrogenase-like isoform X1 [Cucurbita moschata] >XP_022948832.1 NADP-specific glutamate dehydrogenase-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 812.8 bits (2098), Expect = 1.4e-231 Identity = 400/401 (99.75%), Postives = 400/401 (99.75%), Query Frame = 0
BLAST of Carg04293 vs. NCBI nr
Match: XP_022998298.1 (NADP-specific glutamate dehydrogenase-like isoform X3 [Cucurbita maxima]) HSP 1 Score: 811.2 bits (2094), Expect = 4.2e-231 Identity = 399/401 (99.50%), Postives = 399/401 (99.50%), Query Frame = 0
BLAST of Carg04293 vs. ExPASy Swiss-Prot
Match: P28724 (NADP-specific glutamate dehydrogenase OS=Giardia intestinalis OX=5741 PE=2 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 1.0e-70 Identity = 121/211 (57.35%), Postives = 158/211 (74.88%), Query Frame = 0
BLAST of Carg04293 vs. ExPASy Swiss-Prot
Match: P31026 (NADP-specific glutamate dehydrogenase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=gdh PE=1 SV=2) HSP 1 Score: 258.8 bits (660), Expect = 1.0e-67 Identity = 122/203 (60.10%), Postives = 156/203 (76.85%), Query Frame = 0
BLAST of Carg04293 vs. ExPASy Swiss-Prot
Match: Q8RQP4 (NADP-specific glutamate dehydrogenase OS=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) OX=196164 GN=gdh PE=3 SV=2) HSP 1 Score: 256.1 bits (653), Expect = 6.8e-67 Identity = 121/203 (59.61%), Postives = 155/203 (76.35%), Query Frame = 0
BLAST of Carg04293 vs. ExPASy Swiss-Prot
Match: P55990 (NADP-specific glutamate dehydrogenase OS=Helicobacter pylori (strain ATCC 700392 / 26695) OX=85962 GN=gdhA PE=3 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 2.0e-63 Identity = 113/207 (54.59%), Postives = 155/207 (74.88%), Query Frame = 0
BLAST of Carg04293 vs. ExPASy Swiss-Prot
Match: P15111 (NADP-specific glutamate dehydrogenase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=gdhA PE=3 SV=2) HSP 1 Score: 243.8 bits (621), Expect = 3.5e-63 Identity = 111/208 (53.37%), Postives = 154/208 (74.04%), Query Frame = 0
BLAST of Carg04293 vs. ExPASy TrEMBL
Match: A0A6J1GAB0 (NADP-specific glutamate dehydrogenase-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452378 PE=3 SV=1) HSP 1 Score: 812.8 bits (2098), Expect = 6.9e-232 Identity = 400/401 (99.75%), Postives = 400/401 (99.75%), Query Frame = 0
BLAST of Carg04293 vs. ExPASy TrEMBL
Match: A0A6J1KDY5 (NADP-specific glutamate dehydrogenase-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492975 PE=3 SV=1) HSP 1 Score: 811.2 bits (2094), Expect = 2.0e-231 Identity = 399/401 (99.50%), Postives = 399/401 (99.50%), Query Frame = 0
BLAST of Carg04293 vs. ExPASy TrEMBL
Match: A0A6J1KGC7 (NADP-specific glutamate dehydrogenase-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111492975 PE=3 SV=1) HSP 1 Score: 811.2 bits (2094), Expect = 2.0e-231 Identity = 399/401 (99.50%), Postives = 399/401 (99.50%), Query Frame = 0
BLAST of Carg04293 vs. ExPASy TrEMBL
Match: A0A0A0LFU6 (ELFV_dehydrog domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G849950 PE=3 SV=1) HSP 1 Score: 798.5 bits (2061), Expect = 1.3e-227 Identity = 392/401 (97.76%), Postives = 396/401 (98.75%), Query Frame = 0
BLAST of Carg04293 vs. ExPASy TrEMBL
Match: A0A6J1ITY0 (NADP-specific glutamate dehydrogenase-like OS=Cucurbita maxima OX=3661 GN=LOC111479896 PE=3 SV=1) HSP 1 Score: 795.0 bits (2052), Expect = 1.5e-226 Identity = 387/401 (96.51%), Postives = 396/401 (98.75%), Query Frame = 0
BLAST of Carg04293 vs. TAIR 10
Match: AT1G51720.1 (Amino acid dehydrogenase family protein ) HSP 1 Score: 716.8 bits (1849), Expect = 9.9e-207 Identity = 337/401 (84.04%), Postives = 377/401 (94.01%), Query Frame = 0
BLAST of Carg04293 vs. TAIR 10
Match: AT3G03910.1 (glutamate dehydrogenase 3 ) HSP 1 Score: 95.5 bits (236), Expect = 1.1e-19 Identity = 55/163 (33.74%), Postives = 79/163 (48.47%), Query Frame = 0
BLAST of Carg04293 vs. TAIR 10
Match: AT5G07440.1 (glutamate dehydrogenase 2 ) HSP 1 Score: 94.7 bits (234), Expect = 1.8e-19 Identity = 55/167 (32.93%), Postives = 80/167 (47.90%), Query Frame = 0
BLAST of Carg04293 vs. TAIR 10
Match: AT5G07440.2 (glutamate dehydrogenase 2 ) HSP 1 Score: 94.7 bits (234), Expect = 1.8e-19 Identity = 55/167 (32.93%), Postives = 80/167 (47.90%), Query Frame = 0
BLAST of Carg04293 vs. TAIR 10
Match: AT5G07440.3 (glutamate dehydrogenase 2 ) HSP 1 Score: 94.7 bits (234), Expect = 1.8e-19 Identity = 55/167 (32.93%), Postives = 80/167 (47.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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