Carg04280 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg04280
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Auxin-responsive protein
Location	Carg_Chr01: 429962 .. 431927 (-)
RNA-Seq Expression	Carg04280
Synteny	Carg04280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATACATTCTCCTCCTTCAATCTCCTTTCATCTTCCTCTTCTCTCCTTCTCCTTCTCCTTCTCCTTCTCCCTCATTATATATATATATATCCTCTTCAACCCTTTGCTTCGCTGCCTATTTTCATTCTCTTCTCGTCTTTCTTTCCACGATTTGAGACCTGGGTCCTCTTTTTTATCATCTCTTCTTCAAGATTTCACCAGGTACTTGGGGTATTTCGTTTTATCTTTTTGTTTCTTTATTTGGGTTCTGTTTTAGTCTTTCATCTAATAACTGCCTCTGTTTCTTACCTTCTTCTCTCCTTCTCCTACTCAGTTTTCTTGCCTATTTTCTCGAACAATTTCATTCAGAAAGGATACCAATTCGTATTTCCTGATTTCTCCCATCTGGGTTTCCTCAAAAACTCCCAAATCTTTCAATGGAGATGAATGGGTGTTCTGAGAAAGACGAGGATTGTCCTCAGCTGTTGGATTTGATCCCCAAACACCGCCAATGGCTTTCCGCCGTAGATGTCGCCGGAAAAACGCAAACCTCCGACGACAAGAAGCTTGAGCTGAGGCTTGGCCTGCCTGGAGAAGCCGACTGGTCCCGCAAAGAAAGAAATGACTCTGTTCTCTCTTTTGGCCATTTTCCCACTTCTTCAAAATTTTCTCCCTCTGAGAATCCGTGGTCGTCGTCTGCAAATTTCCTTGGAAAGCTTCAACCCAACAACTTTTCAGGGTTTTGTTCTAAAATGGGTGATTTACAAAATGCTGAAGCCAAATCATTTCCTTCCTCTGCTAACACACCTGTTTCTAACACTTCTCAGAAAAGGTACACCCTCTCTTTCTCTTGGTGTTTAGTATTATTTTCATGGCTGTTGAAACTCGAAGCATGTGTAAAAAGGACAAAGGGTCATCTTATGACAGGCTTGTGTTCTTGTGGTCCATGTCCTGTCCTTGCATCTTTTTTAATCCTTTCCACTTGGTAATTGAAAAATGGGTCTAATCTTATCTTTCCTTTCCTTTGTCTGTTTGTTTTTTTGGCATTAGTCTTAATCAAAGCTTCCCTTAACAAGAATCTTTTTTTAGCTAACTTTTGTTTCAGTTTCTGAATTTAGATAAGTGAATGAATTTGGGTTGTAAGGGTCAAGTTGATGAACAGCGGATGTTGTCAATATCTACTTTACTTTGAATGCTCTGTTTTTCAAAGAATTAGGTAGTGAAATACACTAATAAGAATTGCGTAACTGTGTGAACAAATACAAAGGACTGCGCCTGCTGCAGTTGTGGGATGGCCACCAATTCGATCCTCGAGAAGAAACCTCAGAAGCAGCAGCTTTGAGAAGCCTGCAGTGGAGTCCTCGGATGCCGCCCCGAGCAAGCTCCCGGCTCCCCGGGAGAAACGGGTCGAAGCTGGTGGGAAGGGACTGTTTGTGAAGATCAATATGGATGGAGTTCCCATTGGTAGGAAGATAGATCTCAATGCCTATGACAACTATCAAAGACTTTCGTCTGCTGTTGATGAACTGTTCCGAGCCTTACTCGCTGGTAATCTCCACAAGAATTGTTCAAACTTTCCTATTAGTTTCATTCAGAGATTCGTCTTCTGAAATTTGTTGGTGTGTGTGCAGCTCAAAGAGATTCGTCAGGCAGTGGCGTGTTGAAGAAGCAAGAAGAAGAGAAACCAATCACGGGTTTGCTGGATGGAAGTGGAGAATATACGCTTGTTTATGAGGACAACGAAGGCGACAGAGTTCTTGTTGGCGATGTGCCGTGGCAGTAAGCATAACTCTCTGCACATCCTTTTATTAGCATTACATTACAGTAGAAGCGTTTCGTAATCTCCTGTCCTCGTGTCACAGAATGTTCATTTCCACGGTGAAGAGGCTGCGCGTGCTGAAGAGCTCTGAATTGCCAGCGTTGAGTGGTGAGTTGAAACACAACCAAACCAACATTCTTGTTTATTTCCTCATTTGATGCCATCACT

mRNA sequence

AATACATTCTCCTCCTTCAATCTCCTTTCATCTTCCTCTTCTCTCCTTCTCCTTCTCCTTCTCCTTCTCCCTCATTATATATATATATATCCTCTTCAACCCTTTGCTTCGCTGCCTATTTTCATTCTCTTCTCGTCTTTCTTTCCACGATTTGAGACCTGGGTCCTCTTTTTTATCATCTCTTCTTCAAGATTTCACCAGTTTTCTTGCCTATTTTCTCGAACAATTTCATTCAGAAAGGATACCAATTCGTATTTCCTGATTTCTCCCATCTGGGTTTCCTCAAAAACTCCCAAATCTTTCAATGGAGATGAATGGGTGTTCTGAGAAAGACGAGGATTGTCCTCAGCTGTTGGATTTGATCCCCAAACACCGCCAATGGCTTTCCGCCGTAGATGTCGCCGGAAAAACGCAAACCTCCGACGACAAGAAGCTTGAGCTGAGGCTTGGCCTGCCTGGAGAAGCCGACTGGTCCCGCAAAGAAAGAAATGACTCTGTTCTCTCTTTTGGCCATTTTCCCACTTCTTCAAAATTTTCTCCCTCTGAGAATCCGTGGTCGTCGTCTGCAAATTTCCTTGGAAAGCTTCAACCCAACAACTTTTCAGGGTTTTGTTCTAAAATGGGTGATTTACAAAATGCTGAAGCCAAATCATTTCCTTCCTCTGCTAACACACCTGTTTCTAACACTTCTCAGAAAAGGACTGCGCCTGCTGCAGTTGTGGGATGGCCACCAATTCGATCCTCGAGAAGAAACCTCAGAAGCAGCAGCTTTGAGAAGCCTGCAGTGGAGTCCTCGGATGCCGCCCCGAGCAAGCTCCCGGCTCCCCGGGAGAAACGGGTCGAAGCTGGTGGGAAGGGACTGTTTGTGAAGATCAATATGGATGGAGTTCCCATTGGTAGGAAGATAGATCTCAATGCCTATGACAACTATCAAAGACTTTCGTCTGCTGTTGATGAACTGTTCCGAGCCTTACTCGCTGCTCAAAGAGATTCGTCAGGCAGTGGCGTGTTGAAGAAGCAAGAAGAAGAGAAACCAATCACGGGTTTGCTGGATGGAAGTGGAGAATATACGCTTGTTTATGAGGACAACGAAGGCGACAGAGTTCTTGTTGGCGATGTGCCGTGGCAAATGTTCATTTCCACGGTGAAGAGGCTGCGCGTGCTGAAGAGCTCTGAATTGCCAGCGTTGAGTGGTGAGTTGAAACACAACCAAACCAACATTCTTGTTTATTTCCTCATTTGATGCCATCACT

Coding sequence (CDS)

ATGGAGATGAATGGGTGTTCTGAGAAAGACGAGGATTGTCCTCAGCTGTTGGATTTGATCCCCAAACACCGCCAATGGCTTTCCGCCGTAGATGTCGCCGGAAAAACGCAAACCTCCGACGACAAGAAGCTTGAGCTGAGGCTTGGCCTGCCTGGAGAAGCCGACTGGTCCCGCAAAGAAAGAAATGACTCTGTTCTCTCTTTTGGCCATTTTCCCACTTCTTCAAAATTTTCTCCCTCTGAGAATCCGTGGTCGTCGTCTGCAAATTTCCTTGGAAAGCTTCAACCCAACAACTTTTCAGGGTTTTGTTCTAAAATGGGTGATTTACAAAATGCTGAAGCCAAATCATTTCCTTCCTCTGCTAACACACCTGTTTCTAACACTTCTCAGAAAAGGACTGCGCCTGCTGCAGTTGTGGGATGGCCACCAATTCGATCCTCGAGAAGAAACCTCAGAAGCAGCAGCTTTGAGAAGCCTGCAGTGGAGTCCTCGGATGCCGCCCCGAGCAAGCTCCCGGCTCCCCGGGAGAAACGGGTCGAAGCTGGTGGGAAGGGACTGTTTGTGAAGATCAATATGGATGGAGTTCCCATTGGTAGGAAGATAGATCTCAATGCCTATGACAACTATCAAAGACTTTCGTCTGCTGTTGATGAACTGTTCCGAGCCTTACTCGCTGCTCAAAGAGATTCGTCAGGCAGTGGCGTGTTGAAGAAGCAAGAAGAAGAGAAACCAATCACGGGTTTGCTGGATGGAAGTGGAGAATATACGCTTGTTTATGAGGACAACGAAGGCGACAGAGTTCTTGTTGGCGATGTGCCGTGGCAAATGTTCATTTCCACGGTGAAGAGGCTGCGCGTGCTGAAGAGCTCTGAATTGCCAGCGTTGAGTGGTGAGTTGAAACACAACCAAACCAACATTCTTGTTTATTTCCTCATTTGA

Protein sequence

MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQTSDDKKLELRLGLPGEADWSRKERNDSVLSFGHFPTSSKFSPSENPWSSSANFLGKLQPNNFSGFCSKMGDLQNAEAKSFPSSANTPVSNTSQKRTAPAAVVGWPPIRSSRRNLRSSSFEKPAVESSDAAPSKLPAPREKRVEAGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAAQRDSSGSGVLKKQEEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALSGELKHNQTNILVYFLI

Homology

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BLAST of Carg04280 vs. NCBI nr
Match: KAG7036461.1 (Auxin-responsive protein IAA26 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 619.4 bits (1596), Expect = 1.7e-173
Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0


Query: 1   MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQTSDDKKLELRLGLPGEADWSRKE 60
           MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQTSDDKKLELRLGLPGEADWSRKE
Sbjct: 1   MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQTSDDKKLELRLGLPGEADWSRKE 60

Query: 61  RNDSVLSFGHFPTSSKFSPSENPWSSSANFLGKLQPNNFSGFCSKMGDLQNAEAKSFPSS 120
           RNDSVLSFGHFPTSSKFSPSENPWSSSANFLGKLQPNNFSGFCSKMGDLQNAEAKSFPSS
Sbjct: 61  RNDSVLSFGHFPTSSKFSPSENPWSSSANFLGKLQPNNFSGFCSKMGDLQNAEAKSFPSS 120

Query: 121 ANTPVSNTSQKRTAPAAVVGWPPIRSSRRNLRSSSFEKPAVESSDAAPSKLPAPREKRVE 180
           ANTPVSNTSQKRTAPAAVVGWPPIRSSRRNLRSSSFEKPAVESSDAAPSKLPAPREKRVE
Sbjct: 121 ANTPVSNTSQKRTAPAAVVGWPPIRSSRRNLRSSSFEKPAVESSDAAPSKLPAPREKRVE 180

Query: 181 AGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAAQRDSSGSGVLKKQE 240
           AGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAAQRDSSGSGVLKKQE
Sbjct: 181 AGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAAQRDSSGSGVLKKQE 240

Query: 241 EEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALSGELK 300
           EEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALSGELK
Sbjct: 241 EEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALSGELK 300

Query: 301 HNQTNILVYFLI 313
           HNQTNILVYFLI
Sbjct: 301 HNQTNILVYFLI 312

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BLAST of Carg04280 vs. NCBI nr
Match: KAG6606746.1 (Auxin-responsive protein IAA26, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 587.8 bits (1514), Expect = 5.5e-164
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQTSDDKKLELRLGLPGEADWSRKE 60
           MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQTSDDKKLELRLGLPGEADWSRKE
Sbjct: 1   MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQTSDDKKLELRLGLPGEADWSRKE 60

Query: 61  RNDSVLSFGHFPTSSKFSPSENPWSSSANFLGKLQPNNFSGFCSKMGDLQNAEAKSFPSS 120
           RNDSVLSFGHFPTSSKFSPSENPWSSSANFLGKLQPNNFSGFCSKMGDLQNAEAKSFPSS
Sbjct: 61  RNDSVLSFGHFPTSSKFSPSENPWSSSANFLGKLQPNNFSGFCSKMGDLQNAEAKSFPSS 120

Query: 121 ANTPVSNTSQKRTAPAAVVGWPPIRSSRRNLRSSSFEKPAVESSDAAPSKLPAPREKRVE 180
           ANTPVSNTSQKRTAPAAVVGWPPIRSSRRNLRSSSFEKPAVESSDAAPSKLPAPREKRVE
Sbjct: 121 ANTPVSNTSQKRTAPAAVVGWPPIRSSRRNLRSSSFEKPAVESSDAAPSKLPAPREKRVE 180

Query: 181 AGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAAQRDSSGSGVLKKQE 240
           AGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAAQRDSSGSGVLKKQE
Sbjct: 181 AGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAAQRDSSGSGVLKKQE 240

Query: 241 EEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALS 297
           EEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALS
Sbjct: 241 EEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALS 296

[Close]

BLAST of Carg04280 vs. NCBI nr
Match: XP_022949519.1 (auxin-responsive protein IAA26-like [Cucurbita moschata] >XP_022949520.1 auxin-responsive protein IAA26-like [Cucurbita moschata])

HSP 1 Score: 582.8 bits (1501), Expect = 1.8e-162
Identity = 293/296 (98.99%), Postives = 294/296 (99.32%), Query Frame = 0


Query: 1   MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQTSDDKKLELRLGLPGEADWSRKE 60
           MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQTSDDKKLELRLGLPGEADWSR E
Sbjct: 1   MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQTSDDKKLELRLGLPGEADWSRNE 60

Query: 61  RNDSVLSFGHFPTSSKFSPSENPWSSSANFLGKLQPNNFSGFCSKMGDLQNAEAKSFPSS 120
           RNDSVLSFGHFPTSSKFSPSENPWSSSANFLGKLQPNNFSGFCSKMGDLQNAEAKSFPSS
Sbjct: 61  RNDSVLSFGHFPTSSKFSPSENPWSSSANFLGKLQPNNFSGFCSKMGDLQNAEAKSFPSS 120

Query: 121 ANTPVSNTSQKRTAPAAVVGWPPIRSSRRNLRSSSFEKPAVESSDAAPSKLPAPREKRVE 180
           ANTPVSNTSQKRTAPA VVGWPPIRSSRRNLRSSSFEKPAVES+DAAPSKLPAPREKRVE
Sbjct: 121 ANTPVSNTSQKRTAPAPVVGWPPIRSSRRNLRSSSFEKPAVESADAAPSKLPAPREKRVE 180

Query: 181 AGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAAQRDSSGSGVLKKQE 240
           AGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAAQRDSSGSGVLKKQE
Sbjct: 181 AGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAAQRDSSGSGVLKKQE 240

Query: 241 EEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALS 297
           EEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALS
Sbjct: 241 EEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALS 296

[Close]

BLAST of Carg04280 vs. NCBI nr
Match: XP_023524900.1 (auxin-responsive protein IAA26-like [Cucurbita pepo subsp. pepo] >XP_023524901.1 auxin-responsive protein IAA26-like [Cucurbita pepo subsp. pepo] >XP_023524902.1 auxin-responsive protein IAA26-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 575.5 bits (1482), Expect = 2.8e-160
Identity = 289/296 (97.64%), Postives = 291/296 (98.31%), Query Frame = 0


Query: 1   MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQTSDDKKLELRLGLPGEADWSRKE 60
           MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDV GKTQTSDDKKLEL LGLPG+ADWSRKE
Sbjct: 1   MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVTGKTQTSDDKKLELTLGLPGDADWSRKE 60

Query: 61  RNDSVLSFGHFPTSSKFSPSENPWSSSANFLGKLQPNNFSGFCSKMGDLQNAEAKSFPSS 120
           RNDS+LSFGHFPTSSKFSPSENPW SSANFLGKLQPN FSGFCSKMGDLQNAEAKSFPSS
Sbjct: 61  RNDSLLSFGHFPTSSKFSPSENPWPSSANFLGKLQPNKFSGFCSKMGDLQNAEAKSFPSS 120

Query: 121 ANTPVSNTSQKRTAPAAVVGWPPIRSSRRNLRSSSFEKPAVESSDAAPSKLPAPREKRVE 180
           ANTPVSNTSQKRTAPA VVGWPPIRSSRRNLRSSSFEKPAVESSDAAPSKLPAPREKRVE
Sbjct: 121 ANTPVSNTSQKRTAPAPVVGWPPIRSSRRNLRSSSFEKPAVESSDAAPSKLPAPREKRVE 180

Query: 181 AGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAAQRDSSGSGVLKKQE 240
           AGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAAQRDSSGSGVLKKQE
Sbjct: 181 AGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAAQRDSSGSGVLKKQE 240

Query: 241 EEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALS 297
           EEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALS
Sbjct: 241 EEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALS 296

[Close]

BLAST of Carg04280 vs. NCBI nr
Match: XP_022997863.1 (auxin-responsive protein IAA26-like [Cucurbita maxima] >XP_022997864.1 auxin-responsive protein IAA26-like [Cucurbita maxima])

HSP 1 Score: 571.2 bits (1471), Expect = 5.3e-159
Identity = 287/296 (96.96%), Postives = 291/296 (98.31%), Query Frame = 0


Query: 1   MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQTSDDKKLELRLGLPGEADWSRKE 60
           MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQ+SDDKKLELRLGLPG+ADWSRKE
Sbjct: 1   MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQSSDDKKLELRLGLPGDADWSRKE 60

Query: 61  RNDSVLSFGHFPTSSKFSPSENPWSSSANFLGKLQPNNFSGFCSKMGDLQNAEAKSFPSS 120
           RNDS+LSFGHFPTSSKFSPSENPW SSANFLGKLQPN FS FCSKMGDLQNAEAKSFPSS
Sbjct: 61  RNDSLLSFGHFPTSSKFSPSENPWPSSANFLGKLQPNKFSVFCSKMGDLQNAEAKSFPSS 120

Query: 121 ANTPVSNTSQKRTAPAAVVGWPPIRSSRRNLRSSSFEKPAVESSDAAPSKLPAPREKRVE 180
           ANTPVSNTSQKRTAPA VVGWPPIRSSRRNLRSSSFEKPAVESSDAAPSKLPAPREKRVE
Sbjct: 121 ANTPVSNTSQKRTAPAPVVGWPPIRSSRRNLRSSSFEKPAVESSDAAPSKLPAPREKRVE 180

Query: 181 AGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAAQRDSSGSGVLKKQE 240
           AGGKGLFVKINMDGVPIGRKIDLNAYDNYQ+LS AVDELFRALLAAQRDSSGSGVLKKQE
Sbjct: 181 AGGKGLFVKINMDGVPIGRKIDLNAYDNYQKLSCAVDELFRALLAAQRDSSGSGVLKKQE 240

Query: 241 EEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALS 297
           EEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALS
Sbjct: 241 EEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALS 296

[Close]

BLAST of Carg04280 vs. ExPASy Swiss-Prot
Match: Q8LAL2 (Auxin-responsive protein IAA26 OS=Arabidopsis thaliana OX=3702 GN=IAA26 PE=1 SV=2)

HSP 1 Score: 238.4 bits (607), Expect = 1.1e-61
Identity = 148/293 (50.51%), Postives = 178/293 (60.75%), Query Frame = 0


Query: 3   MNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQTSDDKKLELRLGLPG--EADWSR-K 62
           M GC    E  P+LLDLIP+ R+W        K  T  +KKLELRLG PG  E D S  K
Sbjct: 1   MEGCPRNREIGPKLLDLIPQGRKWYQ----EDKNNTDQEKKLELRLGPPGGDEEDHSAIK 60

Query: 63  ERNDSVLSFGHFPTSSKFSPSENPWSSSANFLGKLQPNNFSGFCSKMGDLQNAEAKSFPS 122
           ++N  + +             E    S   F G    N+FS                 PS
Sbjct: 61  KKNTEIRNI----------KKETEDKSFHCFNG----NHFS-----------------PS 120

Query: 123 SANTPVSNTSQKRTAPAAVVGWPPIRSSRRNLRSSSFEKPAVESSDAAPSKLPAPREKRV 182
           +  T V + SQKRTAP  VVGWPP+RS R+NL S+S  K   ESS           EK+V
Sbjct: 121 NKTTSVPHISQKRTAPGPVVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEKQV 180

Query: 183 EAGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAAQRDSSGSGVLKKQ 242
           E   +G+FVKINMDGVPIGRK+DLNAY++Y++LS  VD+LFR LLAAQRD S       Q
Sbjct: 181 ETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDG-----Q 240

Query: 243 EEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSEL 293
            EEKPI GLLDG GE+TL YEDNEGD++LVGDVPWQMF+S+VKRLRV+KSSE+
Sbjct: 241 GEEKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEI 253

[Close]

BLAST of Carg04280 vs. ExPASy Swiss-Prot
Match: O24408 (Auxin-responsive protein IAA18 OS=Arabidopsis thaliana OX=3702 GN=IAA18 PE=1 SV=2)

HSP 1 Score: 204.5 bits (519), Expect = 1.7e-51
Identity = 139/300 (46.33%), Postives = 174/300 (58.00%), Query Frame = 0


Query: 3   MNGCSEKDEDCPQLLDL-IPKHRQ-WLSAVDVAGKTQTSDDKKLELRLGLPGEADWSRKE 62
           M G S   E  P+LLDL IP+ R+ W    D       +++KKLEL+LG PGE D     
Sbjct: 1   MEGYSRNGEISPKLLDLMIPQERRNWFH--DEKNSVFKTEEKKLELKLGPPGEED----- 60

Query: 63  RNDSVLSFGHFPTSSKFSPSENPWSSSANFLGKLQPNNFSGFCSKMGDLQNAEAKSFPSS 122
             D      H     K  P +    S  +  GK     FS                 PSS
Sbjct: 61  --DDESMIRHM----KKEPKD---KSILSLAGKY----FS-----------------PSS 120

Query: 123 ANTPVSNTSQKRTAPAAVVGWPPIRSSRRNLRSSSFEKPAVESSDAAPSKLPAPREKRVE 182
             T    TS KRTAP  VVGWPP+RS R+NL S S  K     +D+  S     + ++ +
Sbjct: 121 TKT----TSHKRTAPGPVVGWPPVRSFRKNLASGSSSK---LGNDSTTSNGVTLKNQKCD 180

Query: 183 AGGK--------GLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAAQRDSSG 242
           A  K        G+FVKINM GVPIGRK+DL+A+++Y++LS  VD+LFR LLAAQRD   
Sbjct: 181 AAAKTTEPKRQGGMFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPS 240

Query: 243 SGVLKKQEEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSEL 293
           S      E+EKPITGLLDG+GEYTL YEDNEGD++LVGDVPWQMF+S+VKRLRV+K+SE+
Sbjct: 241 S-----IEDEKPITGLLDGNGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSEI 251

[Close]

BLAST of Carg04280 vs. ExPASy Swiss-Prot
Match: Q5W670 (Auxin-responsive protein IAA18 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA18 PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 7.2e-50
Identity = 136/314 (43.31%), Postives = 175/314 (55.73%), Query Frame = 0


Query: 14  PQLLDLIPKHRQW-LSAVDVAGKTQTS----DDKKLELRLGLPG-----------EADWS 73
           P LL LIP  R+W +   D  G   T+    +DK+LEL+LGLPG           E    
Sbjct: 12  PTLLHLIPDGREWKVKEADGEGSRNTNLDADEDKELELKLGLPGVQQEERAADSREKIQQ 71

Query: 74  RKERNDSVLSFGHFPTSSKFSPSENPWSSSANFL--------GKLQPNNFSGFCSK---- 133
           ++  + S  S G FPT SK + S     +   F         G  Q +  +  C K    
Sbjct: 72  QQRESSSEPSIGCFPTHSKPTTSIGTTGAKRGFFAIVGATLEGYNQSHRDTEECGKELTL 131

Query: 134 -----MGDLQNAEAKSFPSSANTPVSNTSQKRTAPAAVVGWPPIRSSRRNL-RSSSFEKP 193
                 G+ +     S P SA    SN  Q R A   VVGWPPIRS RRNL   SSF++ 
Sbjct: 132 GDENMAGERKKGCCPSPPCSAAAHSSN-PQGRGAIPPVVGWPPIRSFRRNLTNGSSFKQS 191

Query: 194 AVESSDAAPSKLPAPREKRVEAGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDEL 253
               +D A  K     +KR         VKINMDG+PIGRK+DL  YD+YQ+LSSAV+EL
Sbjct: 192 PERQNDEADDKAKPICKKRP-------LVKINMDGIPIGRKVDLQIYDSYQKLSSAVEEL 251

Query: 254 FRALLAAQRDSSGSGVLKKQEEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFIS 294
           FR  L AQ+D S +   ++  E+K  +GLLDG+G YTLVYEDN+GDR+L GD+PW++F+S
Sbjct: 252 FRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYEDNDGDRMLAGDIPWKVFVS 311

[Close]

BLAST of Carg04280 vs. ExPASy Swiss-Prot
Match: Q6H543 (Auxin-responsive protein IAA7 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA7 PE=2 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.4e-47
Identity = 117/264 (44.32%), Postives = 161/264 (60.98%), Query Frame = 0


Query: 34  GKTQTSDDKKLELRLGLPGEADWSRKERNDSVLSFGHFPTSSKFSPSENPWSSSANFLGK 93
           G  Q  ++K LEL LGLPG   W    R+    +      ++     +   SS  +    
Sbjct: 31  GDEQEEEEKTLELSLGLPG-GGWRAACRDKGTTTKHSIAAAAAADDDDGDKSSMLSLGYS 90

Query: 94  LQPNNFSGFCSK-MGDLQNAEAKSFPSSANTPVSNTS----QKRTAPAAVVGWPPIRSSR 153
              ++  G  +K  G  +  EA   P++ N  +++ +    Q R+    VVGWPP+R+ R
Sbjct: 91  TLVSHSQGKANKNKGSPEEEEAHPPPATGNNALASNNNGCFQTRSPSTPVVGWPPVRTFR 150

Query: 154 RNLRSSSFEKPAVESSDAAPSKLPAPREKRVEAGGKGLFVKINMDGVPIGRKIDLNAYDN 213
           RNL +SS  K ++E  +         +  + E   +  F+KINMDGVPIGRKIDLNA+D+
Sbjct: 151 RNLATSS--KASLELQN-------GKKAAKAEEIKRAPFIKINMDGVPIGRKIDLNAFDS 210

Query: 214 YQRLSSAVDELFRALLAAQRDSSGSGVLKKQEEEKPITGLLDGSGEYTLVYEDNEGDRVL 273
           Y++LS AVD+LFR LLAAQRD   +G    Q+E+  I+GLLDG+GEYTLVYED EGD+VL
Sbjct: 211 YEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAISGLLDGTGEYTLVYEDYEGDKVL 270

Query: 274 VGDVPWQMFISTVKRLRVLKSSEL 293
           VGDVPW MF+S+VKRLRVLK+S+L
Sbjct: 271 VGDVPWGMFVSSVKRLRVLKTSDL 284

[Close]

BLAST of Carg04280 vs. ExPASy Swiss-Prot
Match: Q8LQ74 (Auxin-responsive protein IAA6 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA6 PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.7e-46
Identity = 133/328 (40.55%), Postives = 182/328 (55.49%), Query Frame = 0


Query: 5   GCSEKDEDCPQLLDLIPKHRQW-LSAVDVAGKTQTS-----DDKKLELRLGLPG-----E 64
           G ++++   PQLLDLIP  ++W L      G+++ +     +DKKL+L+LGLPG     E
Sbjct: 4   GSNKREGLPPQLLDLIPDEKEWKLREALGLGRSRNAGFDGEEDKKLDLKLGLPGFIEDDE 63

Query: 65  ADWSRK---ERNDSVLSFGHFPTSSKFSPSENPWSSSANFLGKLQPNNFSGF-------- 124
           A+  R    ++    LS   FP  SK + S    + +         +   G+        
Sbjct: 64  AETLRDYRLQQESPSLSLSFFPKHSKTTSSTTTTTGAKRGFIDTVEDKTEGYNDQKQQAR 123

Query: 125 --CSK-------MGDLQNAEAKSFP------SSANTPVSN--TSQKRTAPAAVVGWPPIR 184
             C K       +  +   +    P       +  TP  N   +Q R A A VVGWPPIR
Sbjct: 124 AGCGKELAVEEMIAAVSERKKGCCPPPPPPHGAPATPARNRPQTQGRGAAAPVVGWPPIR 183

Query: 185 SSRRNLRSSSFEKPAVE-SSDAAPSKLPAPREKRVEAGGKGLFVKINMDGVPIGRKIDLN 244
           S RRNL SSS  K + E  +D A +K+    +K          VKINMDG+PIGRKIDL 
Sbjct: 184 SFRRNLASSSSSKHSPEPQNDNANAKVTLTCKKNP-------LVKINMDGIPIGRKIDLA 243

Query: 245 AYDNYQRLSSAVDELFRALLAAQRDSSGSGVLKKQEEEKPITGLLDGSGEYTLVYEDNEG 293
           AY++Y  LSSAV +LF   L AQ+D + + + ++  ++K    LLDGSGEYTLVYED+EG
Sbjct: 244 AYNSYDGLSSAVKQLFHGFLQAQKDQTNAQIAQQGADDKIFYQLLDGSGEYTLVYEDSEG 303

[Close]

BLAST of Carg04280 vs. ExPASy TrEMBL
Match: A0A6J1GD22 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111452847 PE=3 SV=1)

HSP 1 Score: 582.8 bits (1501), Expect = 8.6e-163
Identity = 293/296 (98.99%), Postives = 294/296 (99.32%), Query Frame = 0


Query: 1   MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQTSDDKKLELRLGLPGEADWSRKE 60
           MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQTSDDKKLELRLGLPGEADWSR E
Sbjct: 1   MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQTSDDKKLELRLGLPGEADWSRNE 60

Query: 61  RNDSVLSFGHFPTSSKFSPSENPWSSSANFLGKLQPNNFSGFCSKMGDLQNAEAKSFPSS 120
           RNDSVLSFGHFPTSSKFSPSENPWSSSANFLGKLQPNNFSGFCSKMGDLQNAEAKSFPSS
Sbjct: 61  RNDSVLSFGHFPTSSKFSPSENPWSSSANFLGKLQPNNFSGFCSKMGDLQNAEAKSFPSS 120

Query: 121 ANTPVSNTSQKRTAPAAVVGWPPIRSSRRNLRSSSFEKPAVESSDAAPSKLPAPREKRVE 180
           ANTPVSNTSQKRTAPA VVGWPPIRSSRRNLRSSSFEKPAVES+DAAPSKLPAPREKRVE
Sbjct: 121 ANTPVSNTSQKRTAPAPVVGWPPIRSSRRNLRSSSFEKPAVESADAAPSKLPAPREKRVE 180

Query: 181 AGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAAQRDSSGSGVLKKQE 240
           AGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAAQRDSSGSGVLKKQE
Sbjct: 181 AGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAAQRDSSGSGVLKKQE 240

Query: 241 EEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALS 297
           EEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALS
Sbjct: 241 EEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALS 296

[Close]

BLAST of Carg04280 vs. ExPASy TrEMBL
Match: A0A6J1KCR4 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111492695 PE=3 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 2.6e-159
Identity = 287/296 (96.96%), Postives = 291/296 (98.31%), Query Frame = 0


Query: 1   MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQTSDDKKLELRLGLPGEADWSRKE 60
           MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQ+SDDKKLELRLGLPG+ADWSRKE
Sbjct: 1   MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQSSDDKKLELRLGLPGDADWSRKE 60

Query: 61  RNDSVLSFGHFPTSSKFSPSENPWSSSANFLGKLQPNNFSGFCSKMGDLQNAEAKSFPSS 120
           RNDS+LSFGHFPTSSKFSPSENPW SSANFLGKLQPN FS FCSKMGDLQNAEAKSFPSS
Sbjct: 61  RNDSLLSFGHFPTSSKFSPSENPWPSSANFLGKLQPNKFSVFCSKMGDLQNAEAKSFPSS 120

Query: 121 ANTPVSNTSQKRTAPAAVVGWPPIRSSRRNLRSSSFEKPAVESSDAAPSKLPAPREKRVE 180
           ANTPVSNTSQKRTAPA VVGWPPIRSSRRNLRSSSFEKPAVESSDAAPSKLPAPREKRVE
Sbjct: 121 ANTPVSNTSQKRTAPAPVVGWPPIRSSRRNLRSSSFEKPAVESSDAAPSKLPAPREKRVE 180

Query: 181 AGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAAQRDSSGSGVLKKQE 240
           AGGKGLFVKINMDGVPIGRKIDLNAYDNYQ+LS AVDELFRALLAAQRDSSGSGVLKKQE
Sbjct: 181 AGGKGLFVKINMDGVPIGRKIDLNAYDNYQKLSCAVDELFRALLAAQRDSSGSGVLKKQE 240

Query: 241 EEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALS 297
           EEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALS
Sbjct: 241 EEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALS 296

[Close]

BLAST of Carg04280 vs. ExPASy TrEMBL
Match: A0A5A7U6P7 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00290 PE=3 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 2.9e-134
Identity = 250/310 (80.65%), Postives = 262/310 (84.52%), Query Frame = 0


Query: 1   MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQTSDDKKLELRLGLPGEADWSRKE 60
           MEMNGCSEKDED PQLLDLIPK RQWL+  DVAGKT TSDDKKLELRLGLPGE DWS K 
Sbjct: 1   MEMNGCSEKDEDYPQLLDLIPKDRQWLTTGDVAGKTNTSDDKKLELRLGLPGEGDWSGKG 60

Query: 61  RNDSVLSFGHFPTSSKFSPSENPWSSSANFLGKLQPNNFSGF--------------CSKM 120
           R DSV SFG+FP S KFSPSENPW  S NFLGKLQP   SGF              C+KM
Sbjct: 61  RGDSVPSFGYFPVSRKFSPSENPWPPSPNFLGKLQPTKISGFCLSAMGKEGVSQPCCTKM 120

Query: 121 GDLQNAEAKSFPSSANTPVSNTSQKRTAPAAVVGWPPIRSSRRNLRSSSFEKPAVESSDA 180
           GDLQNAEAK FPSS N  VSN+SQKRTAPA VVGWPPIRSSRRNL SSSF KPA ES+DA
Sbjct: 121 GDLQNAEAKPFPSSVNIAVSNSSQKRTAPAPVVGWPPIRSSRRNLASSSFSKPASESADA 180

Query: 181 APSKLPAPREKRVEAGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAA 240
           +PSKLP P EK V+ GGKGLFVKINMDGVPIGRKIDLNAYD+Y++LSS VDELFR LLAA
Sbjct: 181 SPSKLPGPGEKPVDVGGKGLFVKINMDGVPIGRKIDLNAYDSYEKLSSGVDELFRGLLAA 240

Query: 241 QRDSSGSGVLKKQEEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRV 297
           QRDSSG GVL KQEEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMF+STVKRLRV
Sbjct: 241 QRDSSGGGVLNKQEEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTVKRLRV 300

[Close]

BLAST of Carg04280 vs. ExPASy TrEMBL
Match: A0A1S3BIC1 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103489974 PE=3 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 2.9e-134
Identity = 250/310 (80.65%), Postives = 262/310 (84.52%), Query Frame = 0


Query: 1   MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQTSDDKKLELRLGLPGEADWSRKE 60
           MEMNGCSEKDED PQLLDLIPK RQWL+  DVAGKT TSDDKKLELRLGLPGE DWS K 
Sbjct: 1   MEMNGCSEKDEDYPQLLDLIPKDRQWLTTGDVAGKTNTSDDKKLELRLGLPGEGDWSGKG 60

Query: 61  RNDSVLSFGHFPTSSKFSPSENPWSSSANFLGKLQPNNFSGF--------------CSKM 120
           R DSV SFG+FP S KFSPSENPW  S NFLGKLQP   SGF              C+KM
Sbjct: 61  RGDSVPSFGYFPVSRKFSPSENPWPPSPNFLGKLQPTKISGFCLSAMGKEGVSQPCCTKM 120

Query: 121 GDLQNAEAKSFPSSANTPVSNTSQKRTAPAAVVGWPPIRSSRRNLRSSSFEKPAVESSDA 180
           GDLQNAEAK FPSS N  VSN+SQKRTAPA VVGWPPIRSSRRNL SSSF KPA ES+DA
Sbjct: 121 GDLQNAEAKPFPSSVNIAVSNSSQKRTAPAPVVGWPPIRSSRRNLASSSFSKPASESADA 180

Query: 181 APSKLPAPREKRVEAGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAA 240
           +PSKLP P EK V+ GGKGLFVKINMDGVPIGRKIDLNAYD+Y++LSS VDELFR LLAA
Sbjct: 181 SPSKLPGPGEKPVDVGGKGLFVKINMDGVPIGRKIDLNAYDSYEKLSSGVDELFRGLLAA 240

Query: 241 QRDSSGSGVLKKQEEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRV 297
           QRDSSG GVL KQEEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMF+STVKRLRV
Sbjct: 241 QRDSSGGGVLNKQEEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTVKRLRV 300

[Close]

BLAST of Carg04280 vs. ExPASy TrEMBL
Match: A0A6J1DJP5 (Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111021103 PE=3 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 6.0e-132
Identity = 248/311 (79.74%), Postives = 263/311 (84.57%), Query Frame = 0


Query: 1   MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQTSDDKKLELRLGLPGEADWSRKE 60
           ME+NGCSEKDEDCP+LLDLIPK RQW++  DV GK  +SDDKKLELRLGLPGEADW  KE
Sbjct: 1   MEINGCSEKDEDCPRLLDLIPKDRQWVTTGDVVGKIHSSDDKKLELRLGLPGEADWCGKE 60

Query: 61  RNDSVLSFGHFPTSSKFSPSENPWSSSANFLGKLQPNNFSGF---------------CSK 120
           R++S L FG+FP   KFS +ENPW  SANFLGKLQP   S F               C+K
Sbjct: 61  RDESPLCFGYFPHPQKFSSTENPW-PSANFLGKLQPTKLSTFHLSAMAKETAGSQPCCTK 120

Query: 121 MGDLQNAEAKSFPSSANTPVSNTSQKRTAPAAVVGWPPIRSSRRNLRSSSFEKPAVESSD 180
           MGDLQNAEAK FPSSANT VSN+SQKRTAPA VVGWPPIRSSRRNL SSSF KPA ES D
Sbjct: 121 MGDLQNAEAKPFPSSANTAVSNSSQKRTAPAPVVGWPPIRSSRRNLASSSFSKPASESLD 180

Query: 181 AAPSKLPAPREKRVEAGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLA 240
           AAPSKLPAPREK VE GGKGLFVKINMDGVPIGRKIDLNAYD+Y +LSSAVDELFR LLA
Sbjct: 181 AAPSKLPAPREKPVEVGGKGLFVKINMDGVPIGRKIDLNAYDSYDKLSSAVDELFRGLLA 240

Query: 241 AQRDSSGSGVLKKQEEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLR 297
           AQRDSSG GVL KQEEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMF+STVKRLR
Sbjct: 241 AQRDSSGGGVLNKQEEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTVKRLR 300

[Close]

BLAST of Carg04280 vs. TAIR 10
Match: AT3G16500.1 (phytochrome-associated protein 1 )

HSP 1 Score: 238.4 bits (607), Expect = 7.6e-63
Identity = 148/293 (50.51%), Postives = 178/293 (60.75%), Query Frame = 0


Query: 3   MNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQTSDDKKLELRLGLPG--EADWSR-K 62
           M GC    E  P+LLDLIP+ R+W        K  T  +KKLELRLG PG  E D S  K
Sbjct: 1   MEGCPRNREIGPKLLDLIPQGRKWYQ----EDKNNTDQEKKLELRLGPPGGDEEDHSAIK 60

Query: 63  ERNDSVLSFGHFPTSSKFSPSENPWSSSANFLGKLQPNNFSGFCSKMGDLQNAEAKSFPS 122
           ++N  + +             E    S   F G    N+FS                 PS
Sbjct: 61  KKNTEIRNI----------KKETEDKSFHCFNG----NHFS-----------------PS 120

Query: 123 SANTPVSNTSQKRTAPAAVVGWPPIRSSRRNLRSSSFEKPAVESSDAAPSKLPAPREKRV 182
           +  T V + SQKRTAP  VVGWPP+RS R+NL S+S  K   ESS           EK+V
Sbjct: 121 NKTTSVPHISQKRTAPGPVVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEKQV 180

Query: 183 EAGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAAQRDSSGSGVLKKQ 242
           E   +G+FVKINMDGVPIGRK+DLNAY++Y++LS  VD+LFR LLAAQRD S       Q
Sbjct: 181 ETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDG-----Q 240

Query: 243 EEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSEL 293
            EEKPI GLLDG GE+TL YEDNEGD++LVGDVPWQMF+S+VKRLRV+KSSE+
Sbjct: 241 GEEKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEI 253

[Close]

BLAST of Carg04280 vs. TAIR 10
Match: AT1G51950.1 (indole-3-acetic acid inducible 18 )

HSP 1 Score: 204.5 bits (519), Expect = 1.2e-52
Identity = 139/300 (46.33%), Postives = 174/300 (58.00%), Query Frame = 0


Query: 3   MNGCSEKDEDCPQLLDL-IPKHRQ-WLSAVDVAGKTQTSDDKKLELRLGLPGEADWSRKE 62
           M G S   E  P+LLDL IP+ R+ W    D       +++KKLEL+LG PGE D     
Sbjct: 1   MEGYSRNGEISPKLLDLMIPQERRNWFH--DEKNSVFKTEEKKLELKLGPPGEED----- 60

Query: 63  RNDSVLSFGHFPTSSKFSPSENPWSSSANFLGKLQPNNFSGFCSKMGDLQNAEAKSFPSS 122
             D      H     K  P +    S  +  GK     FS                 PSS
Sbjct: 61  --DDESMIRHM----KKEPKD---KSILSLAGKY----FS-----------------PSS 120

Query: 123 ANTPVSNTSQKRTAPAAVVGWPPIRSSRRNLRSSSFEKPAVESSDAAPSKLPAPREKRVE 182
             T    TS KRTAP  VVGWPP+RS R+NL S S  K     +D+  S     + ++ +
Sbjct: 121 TKT----TSHKRTAPGPVVGWPPVRSFRKNLASGSSSK---LGNDSTTSNGVTLKNQKCD 180

Query: 183 AGGK--------GLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAAQRDSSG 242
           A  K        G+FVKINM GVPIGRK+DL+A+++Y++LS  VD+LFR LLAAQRD   
Sbjct: 181 AAAKTTEPKRQGGMFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPS 240

Query: 243 SGVLKKQEEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSEL 293
           S      E+EKPITGLLDG+GEYTL YEDNEGD++LVGDVPWQMF+S+VKRLRV+K+SE+
Sbjct: 241 S-----IEDEKPITGLLDGNGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSEI 251

[Close]

BLAST of Carg04280 vs. TAIR 10
Match: AT5G25890.1 (indole-3-acetic acid inducible 28 )

HSP 1 Score: 136.7 bits (343), Expect = 3.1e-32
Identity = 83/177 (46.89%), Postives = 106/177 (59.89%), Query Frame = 0


Query: 120 SANTPVSNTSQKRTAPAAVVGWPPIRSSRRNLRSSSFEKPAVESSDAAPSKLPAPREKRV 179
           S+    S  S  R   A VVGWPP+RSSRRNL +   E+   + SD              
Sbjct: 31  SSTKETSFLSNNRVEVAPVVGWPPVRSSRRNLTAQLKEEMKKKESDEE------------ 90

Query: 180 EAGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAAQRDSSGSGVLKKQ 239
               K L+VKINM+GVPIGRK++L+AY+NYQ+LS AVD+LF     +++DS         
Sbjct: 91  ----KELYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLF-----SKKDS--------- 150

Query: 240 EEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALS 297
                     D + +YTLVYED EGD+VLVGDVPW+MF+STVKRL VLK+S   +LS
Sbjct: 151 ---------WDLNRQYTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTSHAFSLS 168

[Close]

BLAST of Carg04280 vs. TAIR 10
Match: AT4G29080.1 (phytochrome-associated protein 2 )

HSP 1 Score: 130.6 bits (327), Expect = 2.2e-30
Identity = 103/289 (35.64%), Postives = 144/289 (49.83%), Query Frame = 0


Query: 27  LSAVDVAGKTQTSDD------KKLELRLGLPGEADWSRKERNDSVLSFGHFPTSSK---F 86
           + A  ++ KT+T D+      K  ELRLGLPG     R +     L+    P S     F
Sbjct: 20  MEATTMSDKTKTRDNNNGLNFKATELRLGLPGSESPERVDSRFLALNKSSCPVSGAKRVF 79

Query: 87  SPS---ENPW---SSSANFLGKLQPNNFSGFCSKMGDLQNAEAKSFPSSANTPVSNTSQK 146
           S +    N W     S    G +     SG   +   +++ ++ +F   A  PV      
Sbjct: 80  SDAINDSNKWVFSPGSTTATGDVG----SGSGPRTSVVKDGKSTTFTKPA-VPVKEKKSS 139

Query: 147 RTAPAA---VVGWPPIRSSRRN-LRSSSFEKPAVESSDAAPSKLPAPREKRVEAGGKGLF 206
            TAPA+   VVGWPPIRS R+N + SS  +KP   S          P +         L+
Sbjct: 140 ATAPASKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQ-------PCLY 199

Query: 207 VKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALLAAQRDSSGSGVLKKQEEEKPITG 266
           VK++M+G P  RKIDL  Y +Y  LSSA++++F      Q  S G G  +    E  +T 
Sbjct: 200 VKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHG-GCGRDGLNESRLTD 259

Query: 267 LLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALS 297
           LL GS EY + YED + D +LVGDVPW+MFI + K+LR++KSSE   L+
Sbjct: 260 LLRGS-EYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLA 294

[Close]

BLAST of Carg04280 vs. TAIR 10
Match: AT2G33310.1 (auxin-induced protein 13 )

HSP 1 Score: 127.1 bits (318), Expect = 2.5e-29
Identity = 83/192 (43.23%), Postives = 113/192 (58.85%), Query Frame = 0


Query: 114 AKSFPS----SANTPVSNTSQKRTAPAAVVGWPPIRSSRRN-LRSSSFEKPAVESSDAAP 173
           AK FPS     A    S+        + VVGWPPI S R N L ++   K A E  +A  
Sbjct: 48  AKDFPSVGSKRAADSASHAGSSPPRSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGK 107

Query: 174 SKL----PAPREKRVEAGGKGLFVKINMDGVPIGRKIDLNAYDNYQRLSSAVDELFRALL 233
            K+    P    K+V    +  F+K+NMDGV IGRK+DLNA+ +Y+ L+  ++++F    
Sbjct: 108 KKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMF---- 167

Query: 234 AAQRDSSGSGVLKKQEEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRL 293
              R + G+  L  Q   KP+  LLDGS E+ L YED EGD +LVGDVPW+MFI++VKRL
Sbjct: 168 --FRTNPGTVGLTSQ-FTKPLR-LLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRL 227

Query: 294 RVLKSSELPALS 297
           RV+K+SE   L+
Sbjct: 228 RVMKTSEANGLA 231

The following BLAST results are available for this feature:

BLAST of Carg04280 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036461.1	1.7e-173	100.00	Auxin-responsive protein IAA26 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6606746.1	5.5e-164	100.00	Auxin-responsive protein IAA26, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022949519.1	1.8e-162	98.99	auxin-responsive protein IAA26-like [Cucurbita moschata] >XP_022949520.1 auxin-r...	[more]
XP_023524900.1	2.8e-160	97.64	auxin-responsive protein IAA26-like [Cucurbita pepo subsp. pepo] >XP_023524901.1...	[more]
XP_022997863.1	5.3e-159	96.96	auxin-responsive protein IAA26-like [Cucurbita maxima] >XP_022997864.1 auxin-res...	[more]

BLAST of Carg04280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LAL2	1.1e-61	50.51	Auxin-responsive protein IAA26 OS=Arabidopsis thaliana OX=3702 GN=IAA26 PE=1 SV=...	[more]
O24408	1.7e-51	46.33	Auxin-responsive protein IAA18 OS=Arabidopsis thaliana OX=3702 GN=IAA18 PE=1 SV=...	[more]
Q5W670	7.2e-50	43.31	Auxin-responsive protein IAA18 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA18...	[more]
Q6H543	3.4e-47	44.32	Auxin-responsive protein IAA7 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA7 P...	[more]
Q8LQ74	1.7e-46	40.55	Auxin-responsive protein IAA6 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA6 P...	[more]

BLAST of Carg04280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GD22	8.6e-163	98.99	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111452847 PE=3 SV=1	[more]
A0A6J1KCR4	2.6e-159	96.96	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111492695 PE=3 SV=1	[more]
A0A5A7U6P7	2.9e-134	80.65	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3BIC1	2.9e-134	80.65	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103489974 PE=3 SV=1	[more]
A0A6J1DJP5	6.0e-132	79.74	Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111021103 PE=3 SV=...	[more]

BLAST of Carg04280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16500.1	7.6e-63	50.51	phytochrome-associated protein 1	[more]
AT1G51950.1	1.2e-52	46.33	indole-3-acetic acid inducible 18	[more]
AT5G25890.1	3.1e-32	46.89	indole-3-acetic acid inducible 28	[more]
AT4G29080.1	2.2e-30	35.64	phytochrome-associated protein 2	[more]
AT2G33310.1	2.5e-29	43.23	auxin-induced protein 13	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 44..295 e-value: 1.4E-65 score: 221.5
None	No IPR available	GENE3D	3.10.20.90		coord: 180..301 e-value: 1.6E-37 score: 129.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..178
None	No IPR available	PANTHER	PTHR31734:SF2	AUXIN-RESPONSIVE PROTEIN IAA26	coord: 11..298
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 184..286
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 11..298
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 185..294 score: 23.964085

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04280-RA	Carg04280-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding