Carg04270 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg04270
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DNA-directed RNA polymerase subunit beta
Location	Carg_Chr01: 468993 .. 472089 (+)
RNA-Seq Expression	Carg04270
Synteny	Carg04270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCTTCGACACTATGAGAGTTCAATCCTCAACCCCTCAAAGCCCCACTTCCAATCGGAGGCTCGAGCGTGCCTTCTCTTCTCGCAGAGCCCCTCATCACAGCGGCGATTTTGATGACGACGATGACCATGATGTTTCCAAGACGAAGAAGAACAGATTTTCCTTATTCACTCACCGCCTTTCCATTTACTTCACTCGAATCGGACCCATTTGGGCCTGCCTTGCGCTCGTTGGTTTAATCCTTCTCATGATTTCGTCCTTGATATTCTTTCACTCCCGCAGATTTGTTTGCGTTTCGTCTTATGATCCTGTTTCCCGCTCTGGGTTCTTTGGCATGGATGGGCTCGATTCCGATTTCGGTTCTCTTGGTGTGCCCTGGTGTAAGTTTTCTTGCTTATCACTTTTGGAAATGTTGAGTTTTAGATCCGTGTTCCGGGTTTATAGCGGTCTGTATATAATGCAAAAAATGGAGAAGAACTATCGTTAATTTGTTTTGGGTATGATGAATTGGTTACATCGAAAACGGGGCGTTGTTTATAGAATTGAATCTGTGTTATCGTAGTTTGAATTTGTTTCGTATCATTCGAGCTTTTCCTAATTTGGAACATTAAATATTTTCTTTACTCAATCTTGGACTGTCTATTGTGGCCTCGGCATTGATCCGTTCCTCGAGTAATGGCTAGGCTATTGTTGAGCAACCTTTAATTTCAAGTTATGTGATAAAAGTGAAGAGTCAAGGCAATATTTAATAATGTTAGAATTGTTGGTTTACGATTAAGATGCCTTATAAATGAACTACTATTCTCATTGACTTCACAGTCCTGGGTTCTAGTTCTAGTCTGATTAAATGTTATGAAACTCCTAAAATTTTTGCTTGTTTGAATCCTTATAATCCCATCCTTGGCAAAAGGCAGATCGAAACATGGAAAGACAGTTGAATGGACTGCAAAAGATTTACTAAAGGGCTTGGAAGAGTTTGTACCAATTTATGAGACTCGACCAATAAAGAACAACCTGTTTGGTATGGGCTTTGATCATAGCTTTGGCCTTTGGTTCATTGCTCGTTGGCTAAAACCAGATTTGATGATTGAAAGTGGCGCATTCAAGGGACATTCAACTTGGGTGTTGCGGCAAGCAATGCCAGACACACCGATTATTTCACTCTCACCCCGTCACCCCGAAAAATACTTGAAGAAGGGACCTGCTTACGTTGATGCTAACTGCACATATTTTGCTGGAAAGGACTTCGTAGATTTTGGAAGTGTTTCCTGGAATAGTGTGATGAAGCAACATGGAATCGATGATCTTAGCCGTGTTCTTGTATTTTTCGACGACCATCAGAATGAATTAAAGAGGTATCCTTGAGTTTCATTGCAATCAATTATTTTTGTTCACCGTCTATTTATGCACACTCTATTATGCTGAAAATTTGTCTTGTAATTTGAGGGCAGAATAAGTCAGGCTCTGAAAGTTGGCTTTCAACACCTTGTTTTTGAGGATAACTACGATACTGGCACAGGAGATCACTATTCTTTAAGGCAGATGTGCGATCAGTTCTATATTAGAGGTGCCTGCTCTTCCACTTGTATCTCATTCCACTTTGCTTTGTTTTTTATACTCTATATGAATATTCCCACCATCTATTTGGATAATCAGATAATGGTTGTCTCATAAAGTGCCTTCCTTAGGACAAAGAAACTGTAACCTAATGAGAAATTTAGAACTGATTTATGTGATCCTCATAATATGTAACAGCCACTGCCACCACCGGCACCGTTAGCAGATATTATCCTCTTTGGACTTTTCCTTTTGGGCTTCCCTCAAGGTTTTAAAACGCGTCTCTTCCCCTCAAGGTCTTTTGTACTTTCCCTTATGGGTTTCCCCATTATGTGTCTACTAGGGGAGGTTTTCACACCCTTATAAGGAATGTTTCGTTCCCCTCTCCAACCGATGTGGGATCTCACAATCCACACTCCCCTTGGGGGCCGGTGTCCTCGCTGGCACATTGCCTGAAACCTAACTTTGATACCGTTTGTAATGGCTCAAGCCCACTGCTAGCCGATATTGTCCTATTTGGGCTTTTTCTTTTGGGCTTCCCCTCAAGGTTTTTAAAATGCGTCTTTTAGAGTTACACAGTGCAACCAATACTCATCTAAATACTGTCTTTTTTGGCCTTTCCCTTTCGGACTTCCTCTCAAGGTTTTTAAAATGCGTATTTCAAAGTTACACAACAAAATGAATACTCATCCAAATACTGTTCTTTTTAAGCTTTCCCTTTTGGGCTTCCCCTCAAGGTTTTTTTGGCTTTTTTGTATGGGCTTCCCCATTACGCATCTACTATGGAGAGGGTCTAGCCCTACTCCAACCAGTGCTTCATCCGTTGACTAGCTCTGATACCATTTGTAATAGCTCAGGCCTATCGCTAGCAGATACTGTCTTCTTTGGGTTTTCCCTTTTGGGTTTCCCCACAAGGTTTTAAAACGCGTCTCTTCCCCACACCCTTATAAGGAATGTTTCGTTCTCCTCTCCGACTGATGTGAGATCTCACTTAATATTTCTAGGGCATAATAAAATCAAAATTATATTCGAGCGCTACTTCCAATGATTTGAAAGTGATTCTGCGAGTCTATGACAATTTAAGTTGAAGTTAATTTTAATGCTGGTATATTTCTGATTTAGGAGGTGGGCACAGTTGCTTCAAGGACAGCGATGAAGCCAGAATCAGAGCAAAAAGGAAGTTGTTCTGGGAAAAGGCAGTGGATGTAGAAGAACTTTGTGGACCGTATGAGGCTTGGTGGGGTGTCCGAGGCTACATGCGTGATGATTTTAACCACAGCAATAGGGCCATCTCCCACGCAGAGCACCTCCAGAACAGCAGGTACTTGGAGTCGATTCTTGATGTGTATTGGGAGCTCCCTCCAGTCGCTGGCCCTTCTTTAACACATCAGACTAGATACGATCCCGCTCGTGTTACGATCCCTATTGTGGAAGATGGCAGGTACGGTTTGTTCCAGCGACTTGGTTTAACTCGACTTGAGACTTGTGTATTTAATGGATACACACAAATGGTCTATATTCAGATATCTAAACAATAG

mRNA sequence

ATGAGCTTCGACACTATGAGAGTTCAATCCTCAACCCCTCAAAGCCCCACTTCCAATCGGAGGCTCGAGCGTGCCTTCTCTTCTCGCAGAGCCCCTCATCACAGCGGCGATTTTGATGACGACGATGACCATGATGTTTCCAAGACGAAGAAGAACAGATTTTCCTTATTCACTCACCGCCTTTCCATTTACTTCACTCGAATCGGACCCATTTGGGCCTGCCTTGCGCTCGTTGGTTTAATCCTTCTCATGATTTCGTCCTTGATATTCTTTCACTCCCGCAGATTTGTTTGCGTTTCGTCTTATGATCCTGTTTCCCGCTCTGGGTTCTTTGGCATGGATGGGCTCGATTCCGATTTCGGTTCTCTTGGTGTGCCCTGGTGCAGATCGAAACATGGAAAGACAGTTGAATGGACTGCAAAAGATTTACTAAAGGGCTTGGAAGAGTTTGTACCAATTTATGAGACTCGACCAATAAAGAACAACCTGTTTGGTATGGGCTTTGATCATAGCTTTGGCCTTTGGTTCATTGCTCGTTGGCTAAAACCAGATTTGATGATTGAAAGTGGCGCATTCAAGGGACATTCAACTTGGGTGTTGCGGCAAGCAATGCCAGACACACCGATTATTTCACTCTCACCCCGTCACCCCGAAAAATACTTGAAGAAGGGACCTGCTTACGTTGATGCTAACTGCACATATTTTGCTGGAAAGGACTTCGTAGATTTTGGAAGTGTTTCCTGGAATAGTGTGATGAAGCAACATGGAATCGATGATCTTAGCCGTGTTCTTGTATTTTTCGACGACCATCAGAATGAATTAAAGAGAATAAGTCAGGCTCTGAAAGTTGGCTTTCAACACCTTGTTTTTGAGGATAACTACGATACTGGCACAGGAGATCACTATTCTTTAAGGCAGATGTGCGATCAGTTCTATATTAGAGGAGGTGGGCACAGTTGCTTCAAGGACAGCGATGAAGCCAGAATCAGAGCAAAAAGGAAGTTGTTCTGGGAAAAGGCAGTGGATGTAGAAGAACTTTGTGGACCGTATGAGGCTTGGTGGGGTGTCCGAGGCTACATGCGTGATGATTTTAACCACAGCAATAGGGCCATCTCCCACGCAGAGCACCTCCAGAACAGCAGGTACTTGGAGTCGATTCTTGATGTGTATTGGGAGCTCCCTCCAGTCGCTGGCCCTTCTTTAACACATCAGACTAGATACGATCCCGCTCGTGTTACGATCCCTATTGTGGAAGATGGCAGGTACGGTTTGTTCCAGCGACTTGGTTTAACTCGACTTGAGACTTGTGTATTTAATGGATACACACAAATGGTCTATATTCAGATATCTAAACAATAG

Coding sequence (CDS)

ATGAGCTTCGACACTATGAGAGTTCAATCCTCAACCCCTCAAAGCCCCACTTCCAATCGGAGGCTCGAGCGTGCCTTCTCTTCTCGCAGAGCCCCTCATCACAGCGGCGATTTTGATGACGACGATGACCATGATGTTTCCAAGACGAAGAAGAACAGATTTTCCTTATTCACTCACCGCCTTTCCATTTACTTCACTCGAATCGGACCCATTTGGGCCTGCCTTGCGCTCGTTGGTTTAATCCTTCTCATGATTTCGTCCTTGATATTCTTTCACTCCCGCAGATTTGTTTGCGTTTCGTCTTATGATCCTGTTTCCCGCTCTGGGTTCTTTGGCATGGATGGGCTCGATTCCGATTTCGGTTCTCTTGGTGTGCCCTGGTGCAGATCGAAACATGGAAAGACAGTTGAATGGACTGCAAAAGATTTACTAAAGGGCTTGGAAGAGTTTGTACCAATTTATGAGACTCGACCAATAAAGAACAACCTGTTTGGTATGGGCTTTGATCATAGCTTTGGCCTTTGGTTCATTGCTCGTTGGCTAAAACCAGATTTGATGATTGAAAGTGGCGCATTCAAGGGACATTCAACTTGGGTGTTGCGGCAAGCAATGCCAGACACACCGATTATTTCACTCTCACCCCGTCACCCCGAAAAATACTTGAAGAAGGGACCTGCTTACGTTGATGCTAACTGCACATATTTTGCTGGAAAGGACTTCGTAGATTTTGGAAGTGTTTCCTGGAATAGTGTGATGAAGCAACATGGAATCGATGATCTTAGCCGTGTTCTTGTATTTTTCGACGACCATCAGAATGAATTAAAGAGAATAAGTCAGGCTCTGAAAGTTGGCTTTCAACACCTTGTTTTTGAGGATAACTACGATACTGGCACAGGAGATCACTATTCTTTAAGGCAGATGTGCGATCAGTTCTATATTAGAGGAGGTGGGCACAGTTGCTTCAAGGACAGCGATGAAGCCAGAATCAGAGCAAAAAGGAAGTTGTTCTGGGAAAAGGCAGTGGATGTAGAAGAACTTTGTGGACCGTATGAGGCTTGGTGGGGTGTCCGAGGCTACATGCGTGATGATTTTAACCACAGCAATAGGGCCATCTCCCACGCAGAGCACCTCCAGAACAGCAGGTACTTGGAGTCGATTCTTGATGTGTATTGGGAGCTCCCTCCAGTCGCTGGCCCTTCTTTAACACATCAGACTAGATACGATCCCGCTCGTGTTACGATCCCTATTGTGGAAGATGGCAGGTACGGTTTGTTCCAGCGACTTGGTTTAACTCGACTTGAGACTTGTGTATTTAATGGATACACACAAATGGTCTATATTCAGATATCTAAACAATAG

Protein sequence

MSFDTMRVQSSTPQSPTSNRRLERAFSSRRAPHHSGDFDDDDDHDVSKTKKNRFSLFTHRLSIYFTRIGPIWACLALVGLILLMISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSDFGSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVSWNSVMKQHGIDDLSRVLVFFDDHQNELKRISQALKVGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRGYMRDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARVTIPIVEDGRYGLFQRLGLTRLETCVFNGYTQMVYIQISKQ

Homology

[Close]

BLAST of Carg04270 vs. NCBI nr
Match: KAG7036471.1 (hypothetical protein SDJN02_00088, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 952.6 bits (2461), Expect = 1.2e-273
Identity = 452/452 (100.00%), Postives = 452/452 (100.00%), Query Frame = 0


Query: 1   MSFDTMRVQSSTPQSPTSNRRLERAFSSRRAPHHSGDFDDDDDHDVSKTKKNRFSLFTHR 60
           MSFDTMRVQSSTPQSPTSNRRLERAFSSRRAPHHSGDFDDDDDHDVSKTKKNRFSLFTHR
Sbjct: 1   MSFDTMRVQSSTPQSPTSNRRLERAFSSRRAPHHSGDFDDDDDHDVSKTKKNRFSLFTHR 60

Query: 61  LSIYFTRIGPIWACLALVGLILLMISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSDF 120
           LSIYFTRIGPIWACLALVGLILLMISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSDF
Sbjct: 61  LSIYFTRIGPIWACLALVGLILLMISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSDF 120

Query: 121 GSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIARW 180
           GSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIARW
Sbjct: 121 GSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIARW 180

Query: 181 LKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGKDF 240
           LKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGKDF
Sbjct: 181 LKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGKDF 240

Query: 241 VDFGSVSWNSVMKQHGIDDLSRVLVFFDDHQNELKRISQALKVGFQHLVFEDNYDTGTGD 300
           VDFGSVSWNSVMKQHGIDDLSRVLVFFDDHQNELKRISQALKVGFQHLVFEDNYDTGTGD
Sbjct: 241 VDFGSVSWNSVMKQHGIDDLSRVLVFFDDHQNELKRISQALKVGFQHLVFEDNYDTGTGD 300

Query: 301 HYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRGYM 360
           HYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRGYM
Sbjct: 301 HYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRGYM 360

Query: 361 RDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARVTIPIVEDG 420
           RDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARVTIPIVEDG
Sbjct: 361 RDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARVTIPIVEDG 420

Query: 421 RYGLFQRLGLTRLETCVFNGYTQMVYIQISKQ 453
           RYGLFQRLGLTRLETCVFNGYTQMVYIQISKQ
Sbjct: 421 RYGLFQRLGLTRLETCVFNGYTQMVYIQISKQ 452

[Close]

BLAST of Carg04270 vs. NCBI nr
Match: XP_022949517.1 (uncharacterized protein LOC111452845 [Cucurbita moschata])

HSP 1 Score: 951.0 bits (2457), Expect = 3.6e-273
Identity = 451/452 (99.78%), Postives = 452/452 (100.00%), Query Frame = 0


Query: 1   MSFDTMRVQSSTPQSPTSNRRLERAFSSRRAPHHSGDFDDDDDHDVSKTKKNRFSLFTHR 60
           MSFDTMRVQSSTPQSPTSNRRLERAFSSRRAPHHSGDFDDDDDHDVSKTKKNRFSLFTHR
Sbjct: 1   MSFDTMRVQSSTPQSPTSNRRLERAFSSRRAPHHSGDFDDDDDHDVSKTKKNRFSLFTHR 60

Query: 61  LSIYFTRIGPIWACLALVGLILLMISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSDF 120
           LSIYFTRIGPIWACLALVGLILLMISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSDF
Sbjct: 61  LSIYFTRIGPIWACLALVGLILLMISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSDF 120

Query: 121 GSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIARW 180
           GSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIARW
Sbjct: 121 GSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIARW 180

Query: 181 LKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGKDF 240
           LKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGKDF
Sbjct: 181 LKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGKDF 240

Query: 241 VDFGSVSWNSVMKQHGIDDLSRVLVFFDDHQNELKRISQALKVGFQHLVFEDNYDTGTGD 300
           VDFGSVSWNSVMKQHGIDDLSRVLVFFDDHQNELKRISQALKVGFQHLVFEDNYDTGTGD
Sbjct: 241 VDFGSVSWNSVMKQHGIDDLSRVLVFFDDHQNELKRISQALKVGFQHLVFEDNYDTGTGD 300

Query: 301 HYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRGYM 360
           HYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRGYM
Sbjct: 301 HYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRGYM 360

Query: 361 RDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARVTIPIVEDG 420
           RDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARV+IPIVEDG
Sbjct: 361 RDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARVSIPIVEDG 420

Query: 421 RYGLFQRLGLTRLETCVFNGYTQMVYIQISKQ 453
           RYGLFQRLGLTRLETCVFNGYTQMVYIQISKQ
Sbjct: 421 RYGLFQRLGLTRLETCVFNGYTQMVYIQISKQ 452

[Close]

BLAST of Carg04270 vs. NCBI nr
Match: XP_023524868.1 (uncharacterized protein LOC111788671 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 939.1 bits (2426), Expect = 1.4e-269
Identity = 446/452 (98.67%), Postives = 447/452 (98.89%), Query Frame = 0


Query: 1   MSFDTMRVQSSTPQSPTSNRRLERAFSSRRAPHHSGDFDDDDDHDVSKTKKNRFSLFTHR 60
           MSFDTMRVQSSTPQSPTSNRRLERA SSRRAPHHSGDFDDDDDHDVSKTKK RFSLFTHR
Sbjct: 1   MSFDTMRVQSSTPQSPTSNRRLERAVSSRRAPHHSGDFDDDDDHDVSKTKKTRFSLFTHR 60

Query: 61  LSIYFTRIGPIWACLALVGLILLMISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSDF 120
           LSIYFTRIGPIWACLALVGLILLMISS IFFHSRRFVCVSSYDPVSRSGFFGMDGLDSDF
Sbjct: 61  LSIYFTRIGPIWACLALVGLILLMISSFIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSDF 120

Query: 121 GSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIARW 180
           GSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIARW
Sbjct: 121 GSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIARW 180

Query: 181 LKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGKDF 240
           LKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGKDF
Sbjct: 181 LKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGKDF 240

Query: 241 VDFGSVSWNSVMKQHGIDDLSRVLVFFDDHQNELKRISQALKVGFQHLVFEDNYDTGTGD 300
           VDFGSVSWNSVMKQHGIDDLSRVLVFFDDHQNELKRISQALK GFQHLVFEDNYDTGTGD
Sbjct: 241 VDFGSVSWNSVMKQHGIDDLSRVLVFFDDHQNELKRISQALKAGFQHLVFEDNYDTGTGD 300

Query: 301 HYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRGYM 360
           HYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRGYM
Sbjct: 301 HYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRGYM 360

Query: 361 RDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARVTIPIVEDG 420
           RDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARV+IPIVEDG
Sbjct: 361 RDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARVSIPIVEDG 420

Query: 421 RYGLFQRLGLTRLETCVFNGYTQMVYIQISKQ 453
           RYGLFQRLGLTRLET VFNGYTQMVYIQISKQ
Sbjct: 421 RYGLFQRLGLTRLETSVFNGYTQMVYIQISKQ 452

[Close]

BLAST of Carg04270 vs. NCBI nr
Match: XP_022997853.1 (uncharacterized protein LOC111492689 [Cucurbita maxima] >XP_022997854.1 uncharacterized protein LOC111492689 [Cucurbita maxima])

HSP 1 Score: 939.1 bits (2426), Expect = 1.4e-269
Identity = 445/452 (98.45%), Postives = 448/452 (99.12%), Query Frame = 0


Query: 1   MSFDTMRVQSSTPQSPTSNRRLERAFSSRRAPHHSGDFDDDDDHDVSKTKKNRFSLFTHR 60
           MSFDTMRVQSSTPQSPTSNRRLERAFSSRRAPHHSGDFDDDDDHDVSKTKKNRFSLFTHR
Sbjct: 1   MSFDTMRVQSSTPQSPTSNRRLERAFSSRRAPHHSGDFDDDDDHDVSKTKKNRFSLFTHR 60

Query: 61  LSIYFTRIGPIWACLALVGLILLMISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSDF 120
           LSIYFTRIGPIWACLALVGLILLMISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSDF
Sbjct: 61  LSIYFTRIGPIWACLALVGLILLMISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSDF 120

Query: 121 GSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIARW 180
           GSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIARW
Sbjct: 121 GSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIARW 180

Query: 181 LKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGKDF 240
           LKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGKDF
Sbjct: 181 LKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGKDF 240

Query: 241 VDFGSVSWNSVMKQHGIDDLSRVLVFFDDHQNELKRISQALKVGFQHLVFEDNYDTGTGD 300
           VDFGS+SWNSVMKQHGI+DLS VLVFFDDHQNELKRISQALK GFQHLVFEDNYDTGTGD
Sbjct: 241 VDFGSISWNSVMKQHGINDLSHVLVFFDDHQNELKRISQALKAGFQHLVFEDNYDTGTGD 300

Query: 301 HYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRGYM 360
           HYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRGYM
Sbjct: 301 HYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRGYM 360

Query: 361 RDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARVTIPIVEDG 420
           RDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARV+ PIVEDG
Sbjct: 361 RDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARVSSPIVEDG 420

Query: 421 RYGLFQRLGLTRLETCVFNGYTQMVYIQISKQ 453
           RYGLFQRLGLTRLET VFNGYTQMVYIQISKQ
Sbjct: 421 RYGLFQRLGLTRLETSVFNGYTQMVYIQISKQ 452

[Close]

BLAST of Carg04270 vs. NCBI nr
Match: KAG6606758.1 (Peroxisome biogenesis protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 885.9 bits (2288), Expect = 1.4e-253
Identity = 419/420 (99.76%), Postives = 420/420 (100.00%), Query Frame = 0


Query: 1   MSFDTMRVQSSTPQSPTSNRRLERAFSSRRAPHHSGDFDDDDDHDVSKTKKNRFSLFTHR 60
           MSFDTMRVQSSTPQSPTSNRRLERAFSSRRAPHHSGDFDDDDDHDVSKTKKNRFSLFTHR
Sbjct: 1   MSFDTMRVQSSTPQSPTSNRRLERAFSSRRAPHHSGDFDDDDDHDVSKTKKNRFSLFTHR 60

Query: 61  LSIYFTRIGPIWACLALVGLILLMISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSDF 120
           LSIYFTRIGPIWACLALVGLILLMISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSDF
Sbjct: 61  LSIYFTRIGPIWACLALVGLILLMISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSDF 120

Query: 121 GSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIARW 180
           GSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIARW
Sbjct: 121 GSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIARW 180

Query: 181 LKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGKDF 240
           LKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGKDF
Sbjct: 181 LKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGKDF 240

Query: 241 VDFGSVSWNSVMKQHGIDDLSRVLVFFDDHQNELKRISQALKVGFQHLVFEDNYDTGTGD 300
           VDFGSVSWNSVMKQHGIDDLSRVLVFFDDHQNELKRISQALKVGFQHLVFEDNYDTGTGD
Sbjct: 241 VDFGSVSWNSVMKQHGIDDLSRVLVFFDDHQNELKRISQALKVGFQHLVFEDNYDTGTGD 300

Query: 301 HYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRGYM 360
           HYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRGYM
Sbjct: 301 HYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRGYM 360

Query: 361 RDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARVTIPIVEDG 420
           RDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARV+IPIVEDG
Sbjct: 361 RDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARVSIPIVEDG 420

[Close]

BLAST of Carg04270 vs. ExPASy TrEMBL
Match: A0A6J1GC96 (uncharacterized protein LOC111452845 OS=Cucurbita moschata OX=3662 GN=LOC111452845 PE=4 SV=1)

HSP 1 Score: 951.0 bits (2457), Expect = 1.7e-273
Identity = 451/452 (99.78%), Postives = 452/452 (100.00%), Query Frame = 0


Query: 1   MSFDTMRVQSSTPQSPTSNRRLERAFSSRRAPHHSGDFDDDDDHDVSKTKKNRFSLFTHR 60
           MSFDTMRVQSSTPQSPTSNRRLERAFSSRRAPHHSGDFDDDDDHDVSKTKKNRFSLFTHR
Sbjct: 1   MSFDTMRVQSSTPQSPTSNRRLERAFSSRRAPHHSGDFDDDDDHDVSKTKKNRFSLFTHR 60

Query: 61  LSIYFTRIGPIWACLALVGLILLMISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSDF 120
           LSIYFTRIGPIWACLALVGLILLMISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSDF
Sbjct: 61  LSIYFTRIGPIWACLALVGLILLMISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSDF 120

Query: 121 GSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIARW 180
           GSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIARW
Sbjct: 121 GSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIARW 180

Query: 181 LKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGKDF 240
           LKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGKDF
Sbjct: 181 LKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGKDF 240

Query: 241 VDFGSVSWNSVMKQHGIDDLSRVLVFFDDHQNELKRISQALKVGFQHLVFEDNYDTGTGD 300
           VDFGSVSWNSVMKQHGIDDLSRVLVFFDDHQNELKRISQALKVGFQHLVFEDNYDTGTGD
Sbjct: 241 VDFGSVSWNSVMKQHGIDDLSRVLVFFDDHQNELKRISQALKVGFQHLVFEDNYDTGTGD 300

Query: 301 HYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRGYM 360
           HYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRGYM
Sbjct: 301 HYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRGYM 360

Query: 361 RDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARVTIPIVEDG 420
           RDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARV+IPIVEDG
Sbjct: 361 RDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARVSIPIVEDG 420

Query: 421 RYGLFQRLGLTRLETCVFNGYTQMVYIQISKQ 453
           RYGLFQRLGLTRLETCVFNGYTQMVYIQISKQ
Sbjct: 421 RYGLFQRLGLTRLETCVFNGYTQMVYIQISKQ 452

[Close]

BLAST of Carg04270 vs. ExPASy TrEMBL
Match: A0A6J1KCQ5 (uncharacterized protein LOC111492689 OS=Cucurbita maxima OX=3661 GN=LOC111492689 PE=4 SV=1)

HSP 1 Score: 939.1 bits (2426), Expect = 6.8e-270
Identity = 445/452 (98.45%), Postives = 448/452 (99.12%), Query Frame = 0


Query: 1   MSFDTMRVQSSTPQSPTSNRRLERAFSSRRAPHHSGDFDDDDDHDVSKTKKNRFSLFTHR 60
           MSFDTMRVQSSTPQSPTSNRRLERAFSSRRAPHHSGDFDDDDDHDVSKTKKNRFSLFTHR
Sbjct: 1   MSFDTMRVQSSTPQSPTSNRRLERAFSSRRAPHHSGDFDDDDDHDVSKTKKNRFSLFTHR 60

Query: 61  LSIYFTRIGPIWACLALVGLILLMISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSDF 120
           LSIYFTRIGPIWACLALVGLILLMISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSDF
Sbjct: 61  LSIYFTRIGPIWACLALVGLILLMISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSDF 120

Query: 121 GSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIARW 180
           GSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIARW
Sbjct: 121 GSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIARW 180

Query: 181 LKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGKDF 240
           LKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGKDF
Sbjct: 181 LKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGKDF 240

Query: 241 VDFGSVSWNSVMKQHGIDDLSRVLVFFDDHQNELKRISQALKVGFQHLVFEDNYDTGTGD 300
           VDFGS+SWNSVMKQHGI+DLS VLVFFDDHQNELKRISQALK GFQHLVFEDNYDTGTGD
Sbjct: 241 VDFGSISWNSVMKQHGINDLSHVLVFFDDHQNELKRISQALKAGFQHLVFEDNYDTGTGD 300

Query: 301 HYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRGYM 360
           HYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRGYM
Sbjct: 301 HYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRGYM 360

Query: 361 RDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARVTIPIVEDG 420
           RDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARV+ PIVEDG
Sbjct: 361 RDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARVSSPIVEDG 420

Query: 421 RYGLFQRLGLTRLETCVFNGYTQMVYIQISKQ 453
           RYGLFQRLGLTRLET VFNGYTQMVYIQISKQ
Sbjct: 421 RYGLFQRLGLTRLETSVFNGYTQMVYIQISKQ 452

[Close]

BLAST of Carg04270 vs. ExPASy TrEMBL
Match: A0A1S3BHM5 (uncharacterized protein LOC103489955 OS=Cucumis melo OX=3656 GN=LOC103489955 PE=4 SV=1)

HSP 1 Score: 872.1 bits (2252), Expect = 1.0e-249
Identity = 414/454 (91.19%), Postives = 431/454 (94.93%), Query Frame = 0


Query: 1   MSFDTMRVQSS-TPQSPTSNRRLERAFSSRRAPHHSGDF-DDDDDHDVSKTKKNRFSLFT 60
           MSFDTMRVQSS TPQSPTS+R LERA SSRR PHHSGD  DDDDD DVSKTKK+ FS FT
Sbjct: 26  MSFDTMRVQSSTTPQSPTSSRMLERALSSRRVPHHSGDIDDDDDDDDVSKTKKHNFSFFT 85

Query: 61  HRLSIYFTRIGPIWACLALVGLILLMISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDS 120
           HR+S YF RIGPIWACLALV LILL+ISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDS
Sbjct: 86  HRISNYFVRIGPIWACLALVALILLLISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDS 145

Query: 121 DFGSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIA 180
           DFGSLGVPWCRSK GKTVEWTAKDLLK LEEFVPIYETRPIKNN++GMGFDHSFGLWFIA
Sbjct: 146 DFGSLGVPWCRSKQGKTVEWTAKDLLKALEEFVPIYETRPIKNNMYGMGFDHSFGLWFIA 205

Query: 181 RWLKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGK 240
           RWLKPDLMIESGAFKGHSTWVLRQAMP T IISLSPRHPEKYLKKGPAYVDANCTYFAGK
Sbjct: 206 RWLKPDLMIESGAFKGHSTWVLRQAMPYTRIISLSPRHPEKYLKKGPAYVDANCTYFAGK 265

Query: 241 DFVDFGSVSWNSVMKQHGIDDLSRVLVFFDDHQNELKRISQALKVGFQHLVFEDNYDTGT 300
           DFVDFGSV+W +VMK+HGIDDLS+VLVFFDDHQNELKRI QAL  GF+HLVFEDNYDTGT
Sbjct: 266 DFVDFGSVAWKNVMKEHGIDDLSQVLVFFDDHQNELKRIKQALNAGFRHLVFEDNYDTGT 325

Query: 301 GDHYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRG 360
           GDHYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVD+EELCGPYE+WWGV+G
Sbjct: 326 GDHYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDIEELCGPYESWWGVQG 385

Query: 361 YMRDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARVTIPIVE 420
           YMRDDFNHSNRAISHAEH QNSRYLESILDVYWE+PPVAGPSLTHQTRYDPARV+ PIVE
Sbjct: 386 YMRDDFNHSNRAISHAEHFQNSRYLESILDVYWEVPPVAGPSLTHQTRYDPARVSSPIVE 445

Query: 421 DGRYGLFQRLGLTRLETCVFNGYTQMVYIQISKQ 453
           DGRYGLFQRLGLT+LET VFNGYTQMVYIQISKQ
Sbjct: 446 DGRYGLFQRLGLTQLETSVFNGYTQMVYIQISKQ 479

[Close]

BLAST of Carg04270 vs. ExPASy TrEMBL
Match: A0A0A0LAU9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G469200 PE=4 SV=1)

HSP 1 Score: 871.7 bits (2251), Expect = 1.3e-249
Identity = 412/453 (90.95%), Postives = 430/453 (94.92%), Query Frame = 0


Query: 1   MSFDTMRVQSS-TPQSPTSNRRLERAFSSRRAPHHSGDFDDDDDHDVSKTKKNRFSLFTH 60
           MSFDTMRVQSS TPQSPTS+R LERA SSRR PHH+GD DDDDD DVSKTKK+ FS FTH
Sbjct: 26  MSFDTMRVQSSTTPQSPTSSRMLERALSSRRVPHHTGDIDDDDD-DVSKTKKHHFSFFTH 85

Query: 61  RLSIYFTRIGPIWACLALVGLILLMISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSD 120
           R+S YF RIGPIWACLA+V LILL+I SLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSD
Sbjct: 86  RISNYFVRIGPIWACLAIVALILLLIFSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSD 145

Query: 121 FGSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIAR 180
           FGSLGVPWCRSKHGKTVEWTAKDLLK LEEFVPIYETRPIKNN++GMGFDHSFGLWFIAR
Sbjct: 146 FGSLGVPWCRSKHGKTVEWTAKDLLKALEEFVPIYETRPIKNNMYGMGFDHSFGLWFIAR 205

Query: 181 WLKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGKD 240
           WLKPDL+IESGAFKGHSTWVLRQAMP T IISLSPRHPEKYLKKGPAYVDANCTYFAGKD
Sbjct: 206 WLKPDLLIESGAFKGHSTWVLRQAMPYTRIISLSPRHPEKYLKKGPAYVDANCTYFAGKD 265

Query: 241 FVDFGSVSWNSVMKQHGIDDLSRVLVFFDDHQNELKRISQALKVGFQHLVFEDNYDTGTG 300
           FVDFGSV+W +VMK+HGI+DLSRVLVFFDDHQNELKRI QAL  GFQHLVFEDNYDTGTG
Sbjct: 266 FVDFGSVAWKNVMKEHGINDLSRVLVFFDDHQNELKRIKQALNAGFQHLVFEDNYDTGTG 325

Query: 301 DHYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRGY 360
           DHYSLRQMCDQFYIRGGGHSCFKDSDEARIR KRKLFWEKAVD+EELCGPYE+WWGV+GY
Sbjct: 326 DHYSLRQMCDQFYIRGGGHSCFKDSDEARIRGKRKLFWEKAVDIEELCGPYESWWGVQGY 385

Query: 361 MRDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARVTIPIVED 420
           MRDDFNHSNRAISHAEH QNSRYLESILDVYWE+PPVAGPSLTHQTRYDPARV+ PIVED
Sbjct: 386 MRDDFNHSNRAISHAEHFQNSRYLESILDVYWEVPPVAGPSLTHQTRYDPARVSSPIVED 445

Query: 421 GRYGLFQRLGLTRLETCVFNGYTQMVYIQISKQ 453
           GRYGLFQRLGLTRLET VFNGYTQMVYIQISKQ
Sbjct: 446 GRYGLFQRLGLTRLETSVFNGYTQMVYIQISKQ 477

[Close]

BLAST of Carg04270 vs. ExPASy TrEMBL
Match: A0A6J1DJJ1 (uncharacterized protein LOC111021111 OS=Momordica charantia OX=3673 GN=LOC111021111 PE=4 SV=1)

HSP 1 Score: 859.8 bits (2220), Expect = 5.3e-246
Identity = 406/455 (89.23%), Postives = 425/455 (93.41%), Query Frame = 0


Query: 1   MSFDTM--RVQSSTPQSPTSNRRLERAFSSRRAPHHSGDFDD-DDDHDVSKTKKNRFSLF 60
           MSFDTM  RVQSS+PQSPTSNR LER  S RR P+HSGD DD DDD   SKTKK+ FS F
Sbjct: 26  MSFDTMRDRVQSSSPQSPTSNRMLERVLSIRRVPYHSGDVDDHDDDDHFSKTKKHNFSFF 85

Query: 61  THRLSIYFTRIGPIWACLALVGLILLMISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLD 120
           THR S YF RIGPIWACLAL+ LI L ISSLIFFHSRRFVCVS+YDPVSRSGFFGMDGL+
Sbjct: 86  THRFSNYFARIGPIWACLALLALIFLFISSLIFFHSRRFVCVSNYDPVSRSGFFGMDGLE 145

Query: 121 SDFGSLGVPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFI 180
           SDFGSLGVPWCRSKHGKTVEWTAKDLL+GLEEFVPIYETRPIKNN++GMGFDHSFGLWFI
Sbjct: 146 SDFGSLGVPWCRSKHGKTVEWTAKDLLRGLEEFVPIYETRPIKNNMYGMGFDHSFGLWFI 205

Query: 181 ARWLKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAG 240
           ARWLKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAG
Sbjct: 206 ARWLKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAG 265

Query: 241 KDFVDFGSVSWNSVMKQHGIDDLSRVLVFFDDHQNELKRISQALKVGFQHLVFEDNYDTG 300
           KDFVDFGSV+W +VMK+HGIDDLSRVL+FFDDHQNELKRI QALK GFQHLVFEDNYDTG
Sbjct: 266 KDFVDFGSVAWINVMKEHGIDDLSRVLIFFDDHQNELKRIKQALKAGFQHLVFEDNYDTG 325

Query: 301 TGDHYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVR 360
           TGDHYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKR+ FWEKAVD+EELCGPYE+WWGV+
Sbjct: 326 TGDHYSLRQMCDQFYIRGGGHSCFKDSDEARIRAKRQKFWEKAVDIEELCGPYESWWGVQ 385

Query: 361 GYMRDDFNHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARVTIPIV 420
           GYMRDDFNHSNRAISHAEH QNSRYLESILDVYWELPP AGPSLTHQTRYDPARV+ PIV
Sbjct: 386 GYMRDDFNHSNRAISHAEHFQNSRYLESILDVYWELPPAAGPSLTHQTRYDPARVSSPIV 445

Query: 421 EDGRYGLFQRLGLTRLETCVFNGYTQMVYIQISKQ 453
           EDGRY LFQRLGL RLET VF+GYTQMVYIQISKQ
Sbjct: 446 EDGRYSLFQRLGLARLETSVFSGYTQMVYIQISKQ 480

[Close]

BLAST of Carg04270 vs. TAIR 10
Match: AT3G16200.1 (unknown protein; Has 97 Blast hits to 97 proteins in 15 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). )

HSP 1 Score: 690.6 bits (1781), Expect = 8.1e-199
Identity = 326/447 (72.93%), Postives = 377/447 (84.34%), Query Frame = 0


Query: 10  SSTPQSPTSNRRLERAFSSRRAPHHSGDF--DDDDDHDVSKTKKNRFSLFTHRLSIYFTR 69
           S +P++PT+   L+RA SSRR PH   D     +   D SKTK+    L     S + +R
Sbjct: 14  SQSPKTPTT--MLDRALSSRR-PHSDADLSASGESGTDESKTKRPHIYLLA---SNFLSR 73

Query: 70  IGPIW---ACLALVGLILLMISSLIFFHSRRFVCVSSYDPVSRSGFFGMDGLDSDFGSLG 129
           IG  W     LAL+ L+LL + S + FHS  FVC+S +DP +R GFFG+DGL+SDFG+LG
Sbjct: 74  IGHQWWPCLILALLFLVLLFLIS-VAFHSHSFVCISRFDPAARIGFFGLDGLESDFGALG 133

Query: 130 VPWCRSKHGKTVEWTAKDLLKGLEEFVPIYETRPIKNNLFGMGFDHSFGLWFIARWLKPD 189
           VPWCRSKHGK VEWT+KDLLKGLEEFVPIYETRPIKNN++GMGFDHSFGLWF+ARWLKPD
Sbjct: 134 VPWCRSKHGKEVEWTSKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFGLWFMARWLKPD 193

Query: 190 LMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFG 249
           +MIESGAFKGHSTWVLRQAMPDTP+ISL+PRHPEKYL+KGPAYVD NCTYFAGKDFVDFG
Sbjct: 194 MMIESGAFKGHSTWVLRQAMPDTPMISLTPRHPEKYLRKGPAYVDGNCTYFAGKDFVDFG 253

Query: 250 SVSWNSVMKQHGIDDLSRVLVFFDDHQNELKRISQALKVGFQHLVFEDNYDTGTGDHYSL 309
           SV W +V+++HGI DLSRV+VFFDDHQNELKR+ QALK GF+HL+FEDNYDTGTGDHYSL
Sbjct: 254 SVDWKNVLRKHGITDLSRVIVFFDDHQNELKRLKQALKAGFRHLIFEDNYDTGTGDHYSL 313

Query: 310 RQMCDQFYIRGGGHSCFKDSDEARIRAKRKLFWEKAVDVEELCGPYEAWWGVRGYMRDDF 369
           RQ+CDQ +IRGGGHSCFKDSDEAR+R+KRK FWEKAVD EELCGP E WWGV+G MRDDF
Sbjct: 314 RQICDQSHIRGGGHSCFKDSDEARMRSKRKKFWEKAVDTEELCGPGETWWGVKGEMRDDF 373

Query: 370 NHSNRAISHAEHLQNSRYLESILDVYWELPPVAGPSLTHQTRYDPARVTIPIVEDGRYGL 429
           NH+N  IS+ +H QNSRY+ESILDVYWELPPVAGPSLTHQ+RYDPAR T PIV DG++ L
Sbjct: 374 NHTNTPISYNQHFQNSRYVESILDVYWELPPVAGPSLTHQSRYDPARATPPIVADGKHRL 433

Query: 430 FQRLGLTRLETCVFNGYTQMVYIQISK 452
           FQR+GL RL+  VFNGYTQMVY++ISK
Sbjct: 434 FQRIGLGRLDKSVFNGYTQMVYLEISK 453

The following BLAST results are available for this feature:

BLAST of Carg04270 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036471.1	1.2e-273	100.00	hypothetical protein SDJN02_00088, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022949517.1	3.6e-273	99.78	uncharacterized protein LOC111452845 [Cucurbita moschata]	[more]
XP_023524868.1	1.4e-269	98.67	uncharacterized protein LOC111788671 [Cucurbita pepo subsp. pepo]	[more]
XP_022997853.1	1.4e-269	98.45	uncharacterized protein LOC111492689 [Cucurbita maxima] >XP_022997854.1 uncharac...	[more]
KAG6606758.1	1.4e-253	99.76	Peroxisome biogenesis protein 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Carg04270 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg04270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GC96	1.7e-273	99.78	uncharacterized protein LOC111452845 OS=Cucurbita moschata OX=3662 GN=LOC1114528...	[more]
A0A6J1KCQ5	6.8e-270	98.45	uncharacterized protein LOC111492689 OS=Cucurbita maxima OX=3661 GN=LOC111492689...	[more]
A0A1S3BHM5	1.0e-249	91.19	uncharacterized protein LOC103489955 OS=Cucumis melo OX=3656 GN=LOC103489955 PE=...	[more]
A0A0A0LAU9	1.3e-249	90.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G469200 PE=4 SV=1	[more]
A0A6J1DJJ1	5.3e-246	89.23	uncharacterized protein LOC111021111 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]

BLAST of Carg04270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16200.1	8.1e-199	72.93	unknown protein; Has 97 Blast hits to 97 proteins in 15 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR36362:SF2	BNAC05G37190D PROTEIN	coord: 10..451
None	No IPR available	PANTHER	PTHR36362	DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA	coord: 10..451

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04270-RA	Carg04270-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032774	RNA biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity