Carg04189 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg04189
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ubiquitin receptor RAD23
Location	Carg_Chr01: 871857 .. 876630 (-)
RNA-Seq Expression	Carg04189
Synteny	Carg04189

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTGCCAAATCTAGGGTTCTCTTTGGTCTCTGTTGCGTTTCAGGTGCCTTCCTACTGAAACGCCGTCGTTTTCGTCCCCTATCCTTCTTCCCCGTCTGGTAATTCGTTGAAATGAAGCTCACTGTGAAGACCCTCAAGGGAAGCCACTTCGAAATTAGGGTTCAGCCCACCGACACCGTAAGTTCTAACGTTTCTTTTTTCTTTTTCATTAATCTCCTCGATTTCTTCATGCGACTATTTGGGATTGTAGTTAATTTATTAATGTAGCTGAGTACGCAAGCATTGACCCAGCTGGCAATCTTCAGCTTTGTTTAATTGTTTTTTTTTTCTTCTTAAGAAATTGTGATTATAGAATTGGAACAGTGTGAAACTACTGGAGGAATTGTTTGGAATTGGAAAGATCCTAAAATTAGGGCTTCGTGTGTTACTTAATCCGTAAGCTGCTTTTCTTTCTGAACGACGATCACAATTATTATTATTATTATTAATTCTGCGTGATCTGCTGGATTTGCATTGTTTGAACACGAGTTGGAGAAGTCTAAGATATCATGCAGTGCACTGTTCTTGTTGGGGATGCCGTTTTAGCTGTAGATTTTAGCAGGCATCTATAATTTTTTTTTTTTTTTTTATTTTTTTTTATTTTTAATGATGCAACTTTAACCCTCTGATTGGAACTTGGATCCTAGGAAGTTTAAGAAATGAACTCATTATTTTGTTGGAACAGAAAGATTTGAAAGGAATGGAATTAAATTGTGCTTGGATTGTAGCTGGAAAAGGGTAAAAATGAATTAAATAATAGTTTACTTATATAGGCTTTTAATCTTGATTTATTAATAGAAAGTTATAATATGACATGGTTAAATAAGCATTTTACCATCAAATTCTATGAAATCCTTCAAAATCCGATGGTTTTAGTTTAGAAAAGTTTTAACGTAAAAACAAGATAAATCTCTTTGATGAGATAACAAACATTGGAGTTCATTTTAAATTTGGGCTCTCCCTAGCAGACACGTTTTAAAACTTTGAGGGGAAGCTCAGAAGGGAAAACCCAAAGAGGAAAATATCTGCTAACGGTGGGCTTAGGCTGTTACAGATGGTATTAGAGCCAAACACTGGGCGGTGTGCCAGCAAGGACGCTGGCCCCCCAATGAGGGTAGATTGTGAGATCCCACATCGGTTGAAGAGGGGAACGAAACATTCTTTATAAGAGTGTGGAAACCTCTCTCTAACTGATGCATTTTAAAACTGTGAGGTTGATGGCGATATGTAACGGGCCAAAGTGGACAATATCTGCTAGCGGTGGTCTTGGGGTGTTACGCTTAGGCAACCAAATAGAACATAATCGTTTTTTGTTCTTTTTTTTTTTAATTTAAAAATTATCATTGTGAAATTTTTGGTGAAGGTGATGGCTGTCAAGAAACATATTGAAGATATACAAGGAAAGGCTAATTATCCTTGTGGTCAGCAATTATTGATACACAATGGTAAAGTTCTAAAAGATGAAACTACGCTGGCAGAAAACAAAGTATCTGAAGAGGGTTTCCTAGTTGTCATGCTCAGCAAGGTATCTTTGGTTCTATAATTTTCTAAATATAAAAAGCACATAAGAAAAGTTTTTATTTTAGATTTTAATGGATGGCTAAAATATCAAATATGATTACGCTCATTTGTATGCATAACAGAGCAAAACGTCTGGCTCAGCAGGGCAGTCATCGACTCAGGTAATATTGCCTATTTTTGTAACTAGGTGTTTATTGTTCTCTAATGTTAACCACCTCTGGAGCCTATTTATTGCAGACTGCTCAAAACCCACCTGTAGCTCAACCAATTATAAATTCAACTCCTCCTACCCAAGTTGCACCATCTCCGACTCCTGCACCTCAAGCTCCCGCACCAGCCCCACCGTCGTTAGTTTTTCAAGAGTGATCTTCTTTTTGCATTTTCTCTCAATTTGTTGAATAATTATTATCCATATGCATTTTTGTTATTGTTTTCCAGTGCCCCTAAGAACACTACATCTACTTCAGACCGGGCGACAGATAAGTATGGCTTCTATTTCCTTTTTGACATTTTTTAACTTCAAGAGGCAAGAATTGCTTAGTAAATCAACCATCTATTTTTATAATCCTAAAACTAGGCTATGATATTACAAATGTCCAATCTGTTAAAAGCTACAGACTTTGATAGGCGTTCTTGATTATTAACTATTGGGACGAACAGCTCATATTACATAGCTATGTGCAATATGTTTCTTCTTCTTTTGCTTTATTTATAAATGAAACTCTTTGCCTGTTGGTGAGAAAGTTTCTCATTCTTTCTTTTGGGGGAATCGTTTGCAGTGTGCAAACAGATACGTACGGTCAAGCTGCTTCAAATTTGGTCGCTGGTAATAACCTGGAAGAGACCATTCAACAAATAATGGATATGGGAGGTGGCAACTGGGACAGAGAAACAGTTGTTCGTGCACTAAGAGCTGCATACAACAATCCAGAGCGTGCAGTGGATTACTTGTACTCCGTATGTCTAAATCATACGTTCTTTGAAACCTGGTCTGGATATGTTCAGTCACTAATGGTGTTTTTTATTTCAGGGTATCCCGGAATCTGCAGAAGTTGCAGTACCAGTGGGTCGTTTTGGTTCTGGTCAAGCCACTGGAACTGATGGATCCCTTCCTGCACCTGCCTCTGGAGCACCCAACACAGCCCCCTTGAACATGTTTCCTCAGGTATGTTTGGATGCATGCTTGAACAGCGTGTTTCTTTGTTTGCTAATATTCACTAATTTTACTGGGTGACAATCATACTGGAGGCACTTCCTGCTGGTGGCGGCAGCGGTGGCGGCGGTAATCTTGGATCTCTTGAATTCCTTAGAAACAATCCACAGGTAACTAATGAAGCATCATTTATGGGGGTTTCCTGATTGGTAAGCTCATTAGCTTTCTTTACTAGATATCTTAGTGCATGGGGTTTAAAAACCGATTGGTTGGACTTTGAAGTCCTTCTCACCTAATGGCTGTGTTAGTTTGCATCTTTTTACCCATCGTGTGAGATCTCACATCGATTGGAGAAGGGAATGAGTGCTAACGAGAACGTTGGGCCTCGAAGGGGGGGGTGGACTATGAGATCCCACATCGGTTGGGGAGGAAAACGAAACATTATTTATATGGGTGGTGGAAACCTCTCCCTAGAAGACGCGTTTTAAAAACCTTGAGAGGAAGCCCGAAAGACAAACCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTAGGCCGTTACACATCGATTCACATAAAATGTATCTGTTAAAAATTCAGACATTCGATCAGAAAATTCTGCATATGAATTGCATTAGTACAGCCATATCATTCCATTACATGTATATATCATTTGTACAAAGGCCTAAAATCATGTTTTGCTTTATTTTGTGTGGACTATGGATTTCATATAGAACTAATTGTGAAGTAGTTACTGAATGAGGATTGTTATCATTGTTCACATTCTAGTTTCAAGCCTTGCGGACGATGGTGCATACAAACCCTCAAATCTTACAGGTCTGCACATCCTTCTGCTTTGCAATTTAGTTAGTGGGTAGTTATAGTCATGGTTTTTCCCAAGAGTTAAATATTTTGCTTCTCATGGCAGCCCATGCTTCAAGAACTTGGCAAGCAGAATCCCCAGCTTTTGAGACTCATTCAGGATCATCATGCAGAGTTCCTTCAGTTAATTAACGAACCTGTCGATAATTTTGAGGGGTGAGTCTTACACCGATGTCGTCTGGTTGATATTAAATCTTGTTAATTTGAAACCTCCTAGGTTAACTGGCTCTTTAGATGGGTTTGATCACGCACATATAACTAGAAACCCCTTGTCTGAAGAACAAGAACTGTTTCTGGATCTGGTTTACTCGAGATGTTGTTCGTCGATTGATTATTAGTTCATCAGCCGAACTTCTTTTGATGTGACATAAACTGTGTTCTTTCTTTCTTTCAGAGAGATGTTTGAACAGGCTGACCCGGACATGCCTCATGCCATTAATGTCACTCCAGCCGAACAGGCAGCCATCGAACGAGTATGAATGAACTCCTTTATAATTCCTGAGGTGCCTTCTTGTTTTTCCCTCTTCAAACTGGATCTGTGTGCTCAAACTTTTTGTGCTTGTTCCCTTGCATAGCTGGAGGCGATGGGATTCGATAGAGCCTTAGTCATCGAGGCATTTTTGGCATGCGATCGCAACGAGGAACTAGCAGCTAACTACTTACTGGAGAATTCTGGAGATTTTGATGACTAACCAACAAACAAAGAATTAATGTTAACCGCACTGTATTCATTATTTTTGGTGCTAAGGTGAATTGGTATCCTTGTCAGCATATTCTTCTTCACTTTTTGAGTCTTCTTTGCATTACATTTTATATACTGTACTAATAAATAGGAAATTTAATTATTCTCTAGTAGGGTCAGAATTGGTATTTTATGTTTTATTTAAAGCTCATTTGTTGCTAACTGGTTGGAAATATCAACTGACTATGCATCATGGTTTTGGGTCGTTTTATGAAAATTTGAACTTTTGACTTGGAAATATGCTTATCTAACAGGCTTAAAACATCATGGAAGCTCGTTTTTTCAGACCATAAGTTTTTAAGTCGGTTCTAGCACAACAAGTCCTTAAATTTTCAATTTTTAGTTTTATATATCTCTCGATATGTTCTACAATTTTTATAGATTATTAACGTATTTTTATAGATTATTAACGTATTGATCTCTTAGATATAGACATAT

mRNA sequence

ACTGCCAAATCTAGGGTTCTCTTTGGTCTCTGTTGCGTTTCAGGTGCCTTCCTACTGAAACGCCGTCGTTTTCGTCCCCTATCCTTCTTCCCCGTCTGGTAATTCGTTGAAATGAAGCTCACTGTGAAGACCCTCAAGGGAAGCCACTTCGAAATTAGGGTTCAGCCCACCGACACCGTGATGGCTGTCAAGAAACATATTGAAGATATACAAGGAAAGGCTAATTATCCTTGTGGTCAGCAATTATTGATACACAATGGTAAAGTTCTAAAAGATGAAACTACGCTGGCAGAAAACAAAGTATCTGAAGAGGGTTTCCTAGTTGTCATGCTCAGCAAGAGCAAAACGTCTGGCTCAGCAGGGCAGTCATCGACTCAGACTGCTCAAAACCCACCTGTAGCTCAACCAATTATAAATTCAACTCCTCCTACCCAAGTTGCACCATCTCCGACTCCTGCACCTCAAGCTCCCGCACCAGCCCCACCGTCTGCCCCTAAGAACACTACATCTACTTCAGACCGGGCGACAGATAATGTGCAAACAGATACGTACGGTCAAGCTGCTTCAAATTTGGTCGCTGGTAATAACCTGGAAGAGACCATTCAACAAATAATGGATATGGGAGGTGGCAACTGGGACAGAGAAACAGTTGTTCGTGCACTAAGAGCTGCATACAACAATCCAGAGCGTGCAGTGGATTACTTGTACTCCGGTATCCCGGAATCTGCAGAAGTTGCAGTACCAGTGGGTCGTTTTGGTTCTGGTCAAGCCACTGGAACTGATGGATCCCTTCCTGCACCTGCCTCTGGAGCACCCAACACAGCCCCCTTGAACATGTTTCCTCAGGCACTTCCTGCTGGTGGCGGCAGCGGTGGCGGCGGTAATCTTGGATCTCTTGAATTCCTTAGAAACAATCCACAGTTTCAAGCCTTGCGGACGATGGTGCATACAAACCCTCAAATCTTACAGCCCATGCTTCAAGAACTTGGCAAGCAGAATCCCCAGCTTTTGAGACTCATTCAGGATCATCATGCAGAGTTCCTTCAGTTAATTAACGAACCTGTCGATAATTTTGAGGGAGAGATGTTTGAACAGGCTGACCCGGACATGCCTCATGCCATTAATGTCACTCCAGCCGAACAGGCAGCCATCGAACGACTGGAGGCGATGGGATTCGATAGAGCCTTAGTCATCGAGGCATTTTTGGCATGCGATCGCAACGAGGAACTAGCAGCTAACTACTTACTGGAGAATTCTGGAGATTTTGATGACTAACCAACAAACAAAGAATTAATGTTAACCGCACTGTATTCATTATTTTTGGTGCTAAGGTGAATTGGTATCCTTGTCAGCATATTCTTCTTCACTTTTTGAGTCTTCTTTGCATTACATTTTATATACTGTACTAATAAATAGGAAATTTAATTATTCTCTAGTAGGGTCAGAATTGGTATTTTATGTTTTATTTAAAGCTCATTTGTTGCTAACTGGTTGGAAATATCAACTGACTATGCATCATGGTTTTGGGTCGTTTTATGAAAATTTGAACTTTTGACTTGGAAATATGCTTATCTAACAGGCTTAAAACATCATGGAAGCTCGTTTTTTCAGACCATAAGTTTTTAAGTCGGTTCTAGCACAACAAGTCCTTAAATTTTCAATTTTTAGTTTTATATATCTCTCGATATGTTCTACAATTTTTATAGATTATTAACGTATTTTTATAGATTATTAACGTATTGATCTCTTAGATATAGACATAT

Coding sequence (CDS)

ATGAAGCTCACTGTGAAGACCCTCAAGGGAAGCCACTTCGAAATTAGGGTTCAGCCCACCGACACCGTGATGGCTGTCAAGAAACATATTGAAGATATACAAGGAAAGGCTAATTATCCTTGTGGTCAGCAATTATTGATACACAATGGTAAAGTTCTAAAAGATGAAACTACGCTGGCAGAAAACAAAGTATCTGAAGAGGGTTTCCTAGTTGTCATGCTCAGCAAGAGCAAAACGTCTGGCTCAGCAGGGCAGTCATCGACTCAGACTGCTCAAAACCCACCTGTAGCTCAACCAATTATAAATTCAACTCCTCCTACCCAAGTTGCACCATCTCCGACTCCTGCACCTCAAGCTCCCGCACCAGCCCCACCGTCTGCCCCTAAGAACACTACATCTACTTCAGACCGGGCGACAGATAATGTGCAAACAGATACGTACGGTCAAGCTGCTTCAAATTTGGTCGCTGGTAATAACCTGGAAGAGACCATTCAACAAATAATGGATATGGGAGGTGGCAACTGGGACAGAGAAACAGTTGTTCGTGCACTAAGAGCTGCATACAACAATCCAGAGCGTGCAGTGGATTACTTGTACTCCGGTATCCCGGAATCTGCAGAAGTTGCAGTACCAGTGGGTCGTTTTGGTTCTGGTCAAGCCACTGGAACTGATGGATCCCTTCCTGCACCTGCCTCTGGAGCACCCAACACAGCCCCCTTGAACATGTTTCCTCAGGCACTTCCTGCTGGTGGCGGCAGCGGTGGCGGCGGTAATCTTGGATCTCTTGAATTCCTTAGAAACAATCCACAGTTTCAAGCCTTGCGGACGATGGTGCATACAAACCCTCAAATCTTACAGCCCATGCTTCAAGAACTTGGCAAGCAGAATCCCCAGCTTTTGAGACTCATTCAGGATCATCATGCAGAGTTCCTTCAGTTAATTAACGAACCTGTCGATAATTTTGAGGGAGAGATGTTTGAACAGGCTGACCCGGACATGCCTCATGCCATTAATGTCACTCCAGCCGAACAGGCAGCCATCGAACGACTGGAGGCGATGGGATTCGATAGAGCCTTAGTCATCGAGGCATTTTTGGCATGCGATCGCAACGAGGAACTAGCAGCTAACTACTTACTGGAGAATTCTGGAGATTTTGATGACTAA

Protein sequence

MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLAENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAPAPAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPLNMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD

Homology

[Close]

BLAST of Carg04189 vs. NCBI nr
Match: KAG7036548.1 (Ubiquitin receptor RAD23b [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 746.5 bits (1926), Expect = 1.1e-211
Identity = 387/387 (100.00%), Postives = 387/387 (100.00%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60
           MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP 120
           ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP 120

Query: 121 APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV 180
           APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV
Sbjct: 121 APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL 240
           VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL 240

Query: 241 NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
           NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL
Sbjct: 241 NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300

Query: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV 360
           RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV
Sbjct: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV 360

Query: 361 IEAFLACDRNEELAANYLLENSGDFDD 388
           IEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 IEAFLACDRNEELAANYLLENSGDFDD 387

[Close]

BLAST of Carg04189 vs. NCBI nr
Match: KAG6606843.1 (Ubiquitin receptor RAD23b, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 744.6 bits (1921), Expect = 4.4e-211
Identity = 386/387 (99.74%), Postives = 386/387 (99.74%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60
           MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP 120
           ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP 120

Query: 121 APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV 180
           APAPPSAPKNTTSTSDRATDNVQ DTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV
Sbjct: 121 APAPPSAPKNTTSTSDRATDNVQADTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL 240
           VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL 240

Query: 241 NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
           NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL
Sbjct: 241 NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300

Query: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV 360
           RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV
Sbjct: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV 360

Query: 361 IEAFLACDRNEELAANYLLENSGDFDD 388
           IEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 IEAFLACDRNEELAANYLLENSGDFDD 387

[Close]

BLAST of Carg04189 vs. NCBI nr
Match: XP_022948743.1 (ubiquitin receptor RAD23b-like [Cucurbita moschata])

HSP 1 Score: 741.9 bits (1914), Expect = 2.8e-210
Identity = 385/387 (99.48%), Postives = 385/387 (99.48%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60
           MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP 120
           ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP 120

Query: 121 APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV 180
           APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV
Sbjct: 121 APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL 240
           VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTD SLPAPASGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDESLPAPASGAPNTAPL 240

Query: 241 NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
           NMFPQALPAGGG GGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL
Sbjct: 241 NMFPQALPAGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300

Query: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV 360
           RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV
Sbjct: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV 360

Query: 361 IEAFLACDRNEELAANYLLENSGDFDD 388
           IEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 IEAFLACDRNEELAANYLLENSGDFDD 387

[Close]

BLAST of Carg04189 vs. NCBI nr
Match: XP_022998454.1 (ubiquitin receptor RAD23b-like [Cucurbita maxima])

HSP 1 Score: 741.1 bits (1912), Expect = 4.8e-210
Identity = 385/387 (99.48%), Postives = 385/387 (99.48%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60
           MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP 120
           ENKVSEEGFLVVMLSKSKTSGSAGQSSTQ AQNPPVAQPIINSTPPTQVAPSPTPA QAP
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQNPPVAQPIINSTPPTQVAPSPTPAAQAP 120

Query: 121 APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV 180
           APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV
Sbjct: 121 APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL 240
           VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL 240

Query: 241 NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
           NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL
Sbjct: 241 NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300

Query: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV 360
           RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV
Sbjct: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV 360

Query: 361 IEAFLACDRNEELAANYLLENSGDFDD 388
           IEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 IEAFLACDRNEELAANYLLENSGDFDD 387

[Close]

BLAST of Carg04189 vs. NCBI nr
Match: XP_023525748.1 (ubiquitin receptor RAD23b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 740.3 bits (1910), Expect = 8.2e-210
Identity = 386/387 (99.74%), Postives = 386/387 (99.74%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60
           MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP 120
           ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINST PTQVAPSPTPAPQAP
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINST-PTQVAPSPTPAPQAP 120

Query: 121 APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV 180
           APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV
Sbjct: 121 APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL 240
           VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL 240

Query: 241 NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
           NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL
Sbjct: 241 NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300

Query: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV 360
           RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV
Sbjct: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV 360

Query: 361 IEAFLACDRNEELAANYLLENSGDFDD 388
           IEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 IEAFLACDRNEELAANYLLENSGDFDD 386

[Close]

BLAST of Carg04189 vs. ExPASy Swiss-Prot
Match: Q84L33 (Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3)

HSP 1 Score: 493.8 bits (1270), Expect = 1.8e-138
Identity = 271/389 (69.67%), Postives = 318/389 (81.75%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60
           MKLTVKTLKGSHFEIRV P+DT+MAVKK+IED QGK NYPCGQQLLIHNGKVLKDET+L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP 120
           ENKV+EEGFLVVMLSKSK+ GSAGQ+S QT+    V+QP+  +T  T+ A +P+    +P
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSS---VSQPVSATTSSTKPA-APSTTQSSP 120

Query: 121 APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV 180
            PA P   +   +         QTDTYGQAAS LV+G++LE+ +QQIM+MGGG+WD+ETV
Sbjct: 121 VPASPIPAQEQPA--------AQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL 240
            RALRAAYNNPERAVDYLYSGIP++AEVAVPV      Q  G+  +  APASG PN++PL
Sbjct: 181 TRALRAAYNNPERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAAPVAPASGGPNSSPL 240

Query: 241 NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
           ++FPQ   A  GS   G+LG+LEFLRNN QFQ LRTMVH+NPQILQPMLQELGKQNPQLL
Sbjct: 241 DLFPQETVAAAGS---GDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLL 300

Query: 301 RLIQDHHAEFLQLINEPVD--NFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRA 360
           RLIQ++ AEFLQL+NEP +  + EG+MF+Q + +MPHAINVTPAEQ AI+RLEAMGFDRA
Sbjct: 301 RLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRA 360

Query: 361 LVIEAFLACDRNEELAANYLLENSGDFDD 388
           LVIEAFLACDRNEELAANYLLENSGDF+D
Sbjct: 361 LVIEAFLACDRNEELAANYLLENSGDFED 371

[Close]

BLAST of Carg04189 vs. ExPASy Swiss-Prot
Match: Q84L32 (Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=2 SV=2)

HSP 1 Score: 455.7 bits (1171), Expect = 5.3e-127
Identity = 253/389 (65.04%), Postives = 304/389 (78.15%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60
           MKLTVKTLKGSHFEIRV PTDT+MAVKK+IED Q K NYPCGQQLLIHNGKVLKDETTL 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP 120
           ENKV+EEGFLVVMLSKSKT+ SAG SSTQ     P +      +  T  APS T +   P
Sbjct: 61  ENKVTEEGFLVVMLSKSKTASSAGPSSTQ-----PTSTTTSTISSTTLAAPSTTQSIAVP 120

Query: 121 APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV 180
           A        N+T   ++ T   Q+DTYGQAAS LV+G+++E+ +QQIM+MGGG+WD+ETV
Sbjct: 121 A-------SNSTPVQEQPT--AQSDTYGQAASTLVSGSSIEQMVQQIMEMGGGSWDKETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL 240
            RALRAAYNNPERAVDYLYSGIPE+  V +P     SG  +G + + P P SG PN++PL
Sbjct: 181 TRALRAAYNNPERAVDYLYSGIPET--VTIPATNL-SGVGSGRELTAP-PPSGGPNSSPL 240

Query: 241 NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
           ++FPQ   +      GG+LG+LEFLR N QFQ LR+MV++NPQILQPMLQELGKQNPQLL
Sbjct: 241 DLFPQEAVS---DAAGGDLGTLEFLRGNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLL 300

Query: 301 RLIQDHHAEFLQLINEPVDNFEG--EMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRA 360
           RLIQ++ AEFLQL+NEP +  +G  ++F+Q D +MPH++NVTP EQ +IERLEAMGFDRA
Sbjct: 301 RLIQENQAEFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAMGFDRA 360

Query: 361 LVIEAFLACDRNEELAANYLLENSGDFDD 388
           +VIEAFL+CDRNEELAANYLLE+S DF+D
Sbjct: 361 IVIEAFLSCDRNEELAANYLLEHSADFED 368

[Close]

BLAST of Carg04189 vs. ExPASy Swiss-Prot
Match: Q84L30 (Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2)

HSP 1 Score: 389.0 bits (998), Expect = 6.1e-107
Identity = 226/393 (57.51%), Postives = 274/393 (69.72%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60
           MK+ VKTL GS+FEI V+P D V  VK  IE ++G A YP  +Q+LIH GKVLKDETTL 
Sbjct: 1   MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKG-AEYPAAKQMLIHQGKVLKDETTLE 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP 120
           EN V E  F+V+MLSK+K S S   +ST +A  P   QP   +TP  QV+     AP A 
Sbjct: 61  ENNVVENSFIVIMLSKTKASPSG--ASTASAPAPSATQPQTVATP--QVS-----APTAS 120

Query: 121 APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV 180
            P P S     T+ +     +VQTD YGQAASNLVAG  LE T+QQI+DMGGG+WDR+TV
Sbjct: 121 VPVPTSG--TATAAAPATAASVQTDVYGQAASNLVAGTTLESTVQQILDMGGGSWDRDTV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQ------ATGTDGSLPAPASGA 240
           VRALRAA+NNPERAV+YLYSGIP  AE+        +G+      A     + PA A+G 
Sbjct: 181 VRALRAAFNNPERAVEYLYSGIPAQAEIPPVAQAPATGEQAANPLAQPQQAAAPAAATGG 240

Query: 241 PNTAPLNMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGK 300
           PN  PLN+FPQ +PA     G GN   L+FLRN+ QFQALR MV  NPQILQPMLQELGK
Sbjct: 241 PNANPLNLFPQGMPAADAGAGAGN---LDFLRNSQQFQALRAMVQANPQILQPMLQELGK 300

Query: 301 QNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMG 360
           QNPQL+RLIQ+H A+FL+LINEPV+  E  M EQ +  MP A+ VTP E+ AIERLE MG
Sbjct: 301 QNPQLVRLIQEHQADFLRLINEPVEGEENVM-EQLEAAMPQAVTVTPEEREAIERLEGMG 360

Query: 361 FDRALVIEAFLACDRNEELAANYLLENSGDFDD 388
           FDRA+V+E F AC++NEELAANYLL++  +F+D
Sbjct: 361 FDRAMVLEVFFACNKNEELAANYLLDHMHEFED 377

[Close]

BLAST of Carg04189 vs. ExPASy Swiss-Prot
Match: Q84L31 (Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2)

HSP 1 Score: 383.3 bits (983), Expect = 3.3e-105
Identity = 237/426 (55.63%), Postives = 289/426 (67.84%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60
           MK+ VKTLKG+HFEI V+P D+V+ VKK+IE +QG   YP  +Q+LIH GKVLKDETT+ 
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 61  ENKVSEEGFLVVMLSKSK-TSGSAGQSSTQTAQ----NPPVAQPIINSTPPTQV------ 120
           ENKV+E  F+V+M++KSK  S +A  +S  T+Q     P  +QP I+   P  V      
Sbjct: 61  ENKVAENSFIVIMMNKSKPASAAASSASAGTSQAKSIPPSTSQPSISPQTPASVSAPVAP 120

Query: 121 --------APSPTPAPQA-------PAPAP-PSAPKNTTSTSDRATDNVQTDTYGQAASN 180
                   AP+PTPAP A       P P P P+   ++T   D A    Q D YGQAASN
Sbjct: 121 APTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAPDSAPVGSQGDVYGQAASN 180

Query: 181 LVAGNNLEETIQQIMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVG 240
           L AG+NLE TIQQI+DMGGG WDRETVV ALRAA+NNPERAV+YLY+GIPE AEV  PV 
Sbjct: 181 LAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVP-PVA 240

Query: 241 R--FGSGQATG----TDGSLPAPASGAPNTAPLNMFPQALPAGGGSGGGGNLGSLEFLRN 300
           R    +GQ       T     APASG PN  PL++FPQ LP  GG+ G    G+L+FLRN
Sbjct: 241 RPPASAGQPANPPAQTQQPAAAPASG-PNANPLDLFPQGLPNVGGNPGA---GTLDFLRN 300

Query: 301 NPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVD------NF 360
           + QFQALR MV  NPQ+LQPMLQELGKQNP L+RLIQDH A+FL+LINEPV+      N 
Sbjct: 301 SQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNL 360

Query: 361 EGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLEN 388
            G+M   A    P AI VT  E+ AIERLEAMGF+RALV+E F AC++NEELAANYLL++
Sbjct: 361 LGQM--AAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDH 419

[Close]

BLAST of Carg04189 vs. ExPASy Swiss-Prot
Match: Q40742 (Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RAD23 PE=1 SV=2)

HSP 1 Score: 343.2 bits (879), Expect = 3.8e-93
Identity = 206/400 (51.50%), Postives = 259/400 (64.75%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60
           MK++VKTLKGS F+I V     V  VK+ IE  QG+  YP  QQ+LIH GKVLKD+TTL 
Sbjct: 1   MKISVKTLKGSTFQIEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDTTLD 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP 120
           ENKV E  FLV+ML + K S S+          P  ++   N  PPTQ  P+  PA QAP
Sbjct: 61  ENKVLENSFLVIMLRQGKGSSSSA---------PATSKAPSNQAPPTQTVPA-APASQAP 120

Query: 121 ------APAPPSAPKNTTSTSDRATDNV--QTDTYGQAASNLVAGNNLEETIQQIMDMGG 180
                  P   SAP  T + S      V  + D YGQA SNLVAG+NLE TIQ I++MGG
Sbjct: 121 VAPATTVPVTVSAPTPTATASPAPAVAVSSEADNYGQATSNLVAGSNLEATIQSILEMGG 180

Query: 181 GNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQAT----GTDGSLP 240
           G WDR+ V+ AL AA+NNPERAV+YLYSG+PE  ++ VP         T     T  + P
Sbjct: 181 GIWDRDIVLHALSAAFNNPERAVEYLYSGVPEQMDIPVPPPSIQPANPTQASQATQPAAP 240

Query: 241 APASGAPNTAPLNMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPM 300
           +  S  PN +PL++FPQALP       G  LG+L+ LRNN QF+ L ++V  NPQILQP+
Sbjct: 241 SILSSGPNASPLDLFPQALPNASTDAAG--LGNLDALRNNAQFRTLLSLVQANPQILQPL 300

Query: 301 LQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGE-MFEQADPDMPHAINVTPAEQAAI 360
           LQELGKQNPQ+L+LIQ++ AEFL LINEP +  + E + +Q    MP  I VTP E  AI
Sbjct: 301 LQELGKQNPQILQLIQENQAEFLHLINEPAEGDDEENLLDQFPEAMPQTIAVTPEENEAI 360

Query: 361 ERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 388
            RLEAMGFDRALV++ F AC+++E+LAANYLL++  +FDD
Sbjct: 361 LRLEAMGFDRALVLDVFFACNKDEQLAANYLLDHMNEFDD 388

[Close]

BLAST of Carg04189 vs. ExPASy TrEMBL
Match: A0A6J1GA66 (Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111452322 PE=3 SV=1)

HSP 1 Score: 741.9 bits (1914), Expect = 1.4e-210
Identity = 385/387 (99.48%), Postives = 385/387 (99.48%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60
           MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP 120
           ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP 120

Query: 121 APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV 180
           APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV
Sbjct: 121 APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL 240
           VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTD SLPAPASGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDESLPAPASGAPNTAPL 240

Query: 241 NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
           NMFPQALPAGGG GGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL
Sbjct: 241 NMFPQALPAGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300

Query: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV 360
           RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV
Sbjct: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV 360

Query: 361 IEAFLACDRNEELAANYLLENSGDFDD 388
           IEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 IEAFLACDRNEELAANYLLENSGDFDD 387

[Close]

BLAST of Carg04189 vs. ExPASy TrEMBL
Match: A0A6J1KED6 (Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111493081 PE=3 SV=1)

HSP 1 Score: 741.1 bits (1912), Expect = 2.3e-210
Identity = 385/387 (99.48%), Postives = 385/387 (99.48%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60
           MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP 120
           ENKVSEEGFLVVMLSKSKTSGSAGQSSTQ AQNPPVAQPIINSTPPTQVAPSPTPA QAP
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQNPPVAQPIINSTPPTQVAPSPTPAAQAP 120

Query: 121 APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV 180
           APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV
Sbjct: 121 APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL 240
           VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL 240

Query: 241 NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
           NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL
Sbjct: 241 NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300

Query: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV 360
           RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV
Sbjct: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV 360

Query: 361 IEAFLACDRNEELAANYLLENSGDFDD 388
           IEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 IEAFLACDRNEELAANYLLENSGDFDD 387

[Close]

BLAST of Carg04189 vs. ExPASy TrEMBL
Match: A0A1S3CI18 (Ubiquitin receptor RAD23 OS=Cucumis melo OX=3656 GN=LOC103501214 PE=3 SV=1)

HSP 1 Score: 681.4 bits (1757), Expect = 2.2e-192
Identity = 354/387 (91.47%), Postives = 366/387 (94.57%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60
           MKLTVKTLKGSHFEIRVQ TDTVMAVKK+IED+QGK NYPCGQQLLIHNGKVLKDE+TLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP 120
           ENKVSEEGFLVVMLSKSKTS SAGQSSTQ AQNPPVAQP+++STP  QV PSPTPAPQAP
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSASAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAPQAP 120

Query: 121 APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV 180
             AP SA KNTTSTSDR TDNVQTDTYGQAASNLVAGNNLE+T+QQ+MDMGGG WDRETV
Sbjct: 121 TQAPSSALKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGTWDRETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL 240
           VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQAT TD S+PAP SGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASVPAPVSGAPNTAPL 240

Query: 241 NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
           NMFPQ   + GG GGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL
Sbjct: 241 NMFPQEALSAGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300

Query: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV 360
           RLIQDHHAEFLQLINEPVDNFEGEMFEQA+PDMPHAINVTPAEQAAIERLEAMGFDRALV
Sbjct: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALV 360

Query: 361 IEAFLACDRNEELAANYLLENSGDFDD 388
           IEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 IEAFLACDRNEELAANYLLENSGDFDD 387

[Close]

BLAST of Carg04189 vs. ExPASy TrEMBL
Match: A0A6J1DGY9 (Ubiquitin receptor RAD23 OS=Momordica charantia OX=3673 GN=LOC111020977 PE=3 SV=1)

HSP 1 Score: 679.5 bits (1752), Expect = 8.3e-192
Identity = 354/387 (91.47%), Postives = 366/387 (94.57%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60
           MKLTVKTLKGSHFEIRVQPTDTVMAVKK+IEDIQGK NYPCGQQLLIHNGKVLKDE+TLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP 120
           ENKVSEEGFLVVMLSKSKTSGS GQSSTQ AQ+PPVAQP++NSTP TQV PSPTPA QAP
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSGSVGQSSTQPAQSPPVAQPVLNSTPTTQVTPSPTPALQAP 120

Query: 121 APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV 180
             AP SAP+NTTSTSDR  DNVQTDTYGQAASNLVAGNNLE+TIQQIMDMGGGNWDRETV
Sbjct: 121 TQAPSSAPRNTTSTSDRVADNVQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL 240
           VRALRAAYNNPERAVDYLYSGIPE+AEVAVPV RFGSGQAT TD SL APASGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPETAEVAVPVARFGSGQATETDASLAAPASGAPNTAPL 240

Query: 241 NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
           NMFPQ   +GGG GGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL
Sbjct: 241 NMFPQEALSGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300

Query: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV 360
           RLIQDHHAEFLQLINEP+DNFEG+MFEQA+ DMPHAINVTPAEQAAIERLEAMGFDRA V
Sbjct: 301 RLIQDHHAEFLQLINEPLDNFEGDMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASV 360

Query: 361 IEAFLACDRNEELAANYLLENSGDFDD 388
           IEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 IEAFLACDRNEELAANYLLENSGDFDD 387

[Close]

BLAST of Carg04189 vs. ExPASy TrEMBL
Match: A0A0A0LF05 (Ubiquitin receptor RAD23 OS=Cucumis sativus OX=3659 GN=Csa_3G710740 PE=3 SV=1)

HSP 1 Score: 677.2 bits (1746), Expect = 4.1e-191
Identity = 356/391 (91.05%), Postives = 369/391 (94.37%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60
           MKLTVKTLKGSHFEIRVQ TDTVMAVKK+IED+QGK NYPCGQQLLIHNGKVLKDE+TLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP 120
           ENKVSEEGFLVVMLSKSKTS SAGQSSTQ AQNPPVAQP+++STP  QV PSPTPAPQAP
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAPQAP 120

Query: 121 --AP--APPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWD 180
             AP  AP SAPKNTTSTS+R TDNVQTDTYGQAASNLVAGNNLE+T+QQ+MDMGGGNWD
Sbjct: 121 TQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWD 180

Query: 181 RETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPN 240
           RETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQAT TD S+PAP SGAPN
Sbjct: 181 RETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASVPAPVSGAPN 240

Query: 241 TAPLNMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQN 300
           TAPLNMFPQ   + G  GGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQN
Sbjct: 241 TAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQN 300

Query: 301 PQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFD 360
           PQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQA+PDMPHAINVTPAEQAAIERLEAMGFD
Sbjct: 301 PQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFD 360

Query: 361 RALVIEAFLACDRNEELAANYLLENSGDFDD 388
           RALVIEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 RALVIEAFLACDRNEELAANYLLENSGDFDD 391

[Close]

BLAST of Carg04189 vs. TAIR 10
Match: AT1G79650.1 (Rad23 UV excision repair protein family )

HSP 1 Score: 493.8 bits (1270), Expect = 1.2e-139
Identity = 271/389 (69.67%), Postives = 318/389 (81.75%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60
           MKLTVKTLKGSHFEIRV P+DT+MAVKK+IED QGK NYPCGQQLLIHNGKVLKDET+L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP 120
           ENKV+EEGFLVVMLSKSK+ GSAGQ+S QT+    V+QP+  +T  T+ A +P+    +P
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSS---VSQPVSATTSSTKPA-APSTTQSSP 120

Query: 121 APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV 180
            PA P   +   +         QTDTYGQAAS LV+G++LE+ +QQIM+MGGG+WD+ETV
Sbjct: 121 VPASPIPAQEQPA--------AQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL 240
            RALRAAYNNPERAVDYLYSGIP++AEVAVPV      Q  G+  +  APASG PN++PL
Sbjct: 181 TRALRAAYNNPERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAAPVAPASGGPNSSPL 240

Query: 241 NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
           ++FPQ   A  GS   G+LG+LEFLRNN QFQ LRTMVH+NPQILQPMLQELGKQNPQLL
Sbjct: 241 DLFPQETVAAAGS---GDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLL 300

Query: 301 RLIQDHHAEFLQLINEPVD--NFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRA 360
           RLIQ++ AEFLQL+NEP +  + EG+MF+Q + +MPHAINVTPAEQ AI+RLEAMGFDRA
Sbjct: 301 RLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRA 360

Query: 361 LVIEAFLACDRNEELAANYLLENSGDFDD 388
           LVIEAFLACDRNEELAANYLLENSGDF+D
Sbjct: 361 LVIEAFLACDRNEELAANYLLENSGDFED 371

[Close]

BLAST of Carg04189 vs. TAIR 10
Match: AT1G79650.2 (Rad23 UV excision repair protein family )

HSP 1 Score: 489.2 bits (1258), Expect = 3.1e-138
Identity = 271/391 (69.31%), Postives = 313/391 (80.05%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60
           MKLTVKTLKGSHFEIRV P+DT+MAVKK+IED QGK NYPCGQQLLIHNGKVLKDET+L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTP--PTQVAPSPTPAPQ 120
           ENKV+EEGFLVVMLSKSK+ GSAGQ+S Q     PV+    ++ P  P+    SP PA  
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQ-----PVSATTSSTKPAAPSTTQSSPVPASP 120

Query: 121 APAPAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRE 180
            PA   P+A               QTDTYGQAAS LV+G++LE+ +QQIM+MGGG+WD+E
Sbjct: 121 IPAQEQPAA---------------QTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKE 180

Query: 181 TVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTA 240
           TV RALRAAYNNPERAVDYLYSGIP++AEVAVPV      Q  G+  +  APASG PN++
Sbjct: 181 TVTRALRAAYNNPERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAAPVAPASGGPNSS 240

Query: 241 PLNMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQ 300
           PL++FPQ   A  GS   G+LG+LEFLRNN QFQ LRTMVH+NPQILQPMLQELGKQNPQ
Sbjct: 241 PLDLFPQETVAAAGS---GDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQ 300

Query: 301 LLRLIQDHHAEFLQLINEPVD--NFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFD 360
           LLRLIQ++ AEFLQL+NEP +  + EG+MF+Q + +MPHAINVTPAEQ AI+RLEAMGFD
Sbjct: 301 LLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFD 360

Query: 361 RALVIEAFLACDRNEELAANYLLENSGDFDD 388
           RALVIEAFLACDRNEELAANYLLENSGDF+D
Sbjct: 361 RALVIEAFLACDRNEELAANYLLENSGDFED 365

[Close]

BLAST of Carg04189 vs. TAIR 10
Match: AT1G79650.4 (Rad23 UV excision repair protein family )

HSP 1 Score: 488.4 bits (1256), Expect = 5.2e-138
Identity = 275/404 (68.07%), Postives = 319/404 (78.96%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60
           MKLTVKTLKGSHFEIRV P+DT+MAVKK+IED QGK NYPCGQQLLIHNGKVLKDET+L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVA------PSPT 120
           ENKV+EEGFLVVMLSKSK+ GSAGQ+S QT+    V+QP+  +T  T+ A       SP 
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSS---VSQPVSATTSSTKPAAPSTTQSSPV 120

Query: 121 PAPQAPAPAPPSAPKNTTSTSDRA---------TDNVQTDTYGQAASNLVAGNNLEETIQ 180
           PA   PA   P+      S +  A             QTDTYGQAAS LV+G++LE+ +Q
Sbjct: 121 PASPIPAQEQPAVYAFVFSFAGLAFCPLYGFPKVSMAQTDTYGQAASTLVSGSSLEQMVQ 180

Query: 181 QIMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDG 240
           QIM+MGGG+WD+ETV RALRAAYNNPERAVDYLYSGIP++AEVAVPV      Q  G+  
Sbjct: 181 QIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGA 240

Query: 241 SLPAPASGAPNTAPLNMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQIL 300
           +  APASG PN++PL++FPQ   A  GS   G+LG+LEFLRNN QFQ LRTMVH+NPQIL
Sbjct: 241 APVAPASGGPNSSPLDLFPQETVAAAGS---GDLGTLEFLRNNDQFQQLRTMVHSNPQIL 300

Query: 301 QPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVD--NFEGEMFEQADPDMPHAINVTPAE 360
           QPMLQELGKQNPQLLRLIQ++ AEFLQL+NEP +  + EG+MF+Q + +MPHAINVTPAE
Sbjct: 301 QPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAE 360

Query: 361 QAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 388
           Q AI+RLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDF+D
Sbjct: 361 QEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 395

[Close]

BLAST of Carg04189 vs. TAIR 10
Match: AT1G16190.1 (Rad23 UV excision repair protein family )

HSP 1 Score: 455.7 bits (1171), Expect = 3.8e-128
Identity = 253/389 (65.04%), Postives = 304/389 (78.15%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60
           MKLTVKTLKGSHFEIRV PTDT+MAVKK+IED Q K NYPCGQQLLIHNGKVLKDETTL 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP 120
           ENKV+EEGFLVVMLSKSKT+ SAG SSTQ     P +      +  T  APS T +   P
Sbjct: 61  ENKVTEEGFLVVMLSKSKTASSAGPSSTQ-----PTSTTTSTISSTTLAAPSTTQSIAVP 120

Query: 121 APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV 180
           A        N+T   ++ T   Q+DTYGQAAS LV+G+++E+ +QQIM+MGGG+WD+ETV
Sbjct: 121 A-------SNSTPVQEQPT--AQSDTYGQAASTLVSGSSIEQMVQQIMEMGGGSWDKETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL 240
            RALRAAYNNPERAVDYLYSGIPE+  V +P     SG  +G + + P P SG PN++PL
Sbjct: 181 TRALRAAYNNPERAVDYLYSGIPET--VTIPATNL-SGVGSGRELTAP-PPSGGPNSSPL 240

Query: 241 NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
           ++FPQ   +      GG+LG+LEFLR N QFQ LR+MV++NPQILQPMLQELGKQNPQLL
Sbjct: 241 DLFPQEAVS---DAAGGDLGTLEFLRGNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLL 300

Query: 301 RLIQDHHAEFLQLINEPVDNFEG--EMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRA 360
           RLIQ++ AEFLQL+NEP +  +G  ++F+Q D +MPH++NVTP EQ +IERLEAMGFDRA
Sbjct: 301 RLIQENQAEFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAMGFDRA 360

Query: 361 LVIEAFLACDRNEELAANYLLENSGDFDD 388
           +VIEAFL+CDRNEELAANYLLE+S DF+D
Sbjct: 361 IVIEAFLSCDRNEELAANYLLEHSADFED 368

[Close]

BLAST of Carg04189 vs. TAIR 10
Match: AT1G79650.3 (Rad23 UV excision repair protein family )

HSP 1 Score: 446.0 bits (1146), Expect = 3.0e-125
Identity = 253/389 (65.04%), Postives = 299/389 (76.86%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA 60
           MKLTVKTLKGSHFEIRV P+DT+MAVKK+IED QGK NYPCGQQLLIHNGKVLKDET+L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP 120
           ENKV+EEGFLVVMLSKSK+ GSAGQ+S QT+    V+QP+  +T  T+ A +P+    +P
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSS---VSQPVSATTSSTKPA-APSTTQSSP 120

Query: 121 APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV 180
            PA P   +   +         QTDTYGQAAS LV+G++LE+ +QQIM+MGGG+WD+ETV
Sbjct: 121 VPASPIPAQEQPA--------AQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL 240
            RALRAAYNNPERAVDYLYSGIP++AEVAVPV      Q  G+  +  APASG PN++PL
Sbjct: 181 TRALRAAYNNPERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAAPVAPASGGPNSSPL 240

Query: 241 NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
           ++FPQ   A  GS   G+LG+LEFLRNN                     QELGKQNPQLL
Sbjct: 241 DLFPQETVAAAGS---GDLGTLEFLRNND--------------------QELGKQNPQLL 300

Query: 301 RLIQDHHAEFLQLINEPVD--NFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRA 360
           RLIQ++ AEFLQL+NEP +  + EG+MF+Q + +MPHAINVTPAEQ AI+RLEAMGFDRA
Sbjct: 301 RLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRA 351

Query: 361 LVIEAFLACDRNEELAANYLLENSGDFDD 388
           LVIEAFLACDRNEELAANYLLENSGDF+D
Sbjct: 361 LVIEAFLACDRNEELAANYLLENSGDFED 351

The following BLAST results are available for this feature:

BLAST of Carg04189 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036548.1	1.1e-211	100.00	Ubiquitin receptor RAD23b [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6606843.1	4.4e-211	99.74	Ubiquitin receptor RAD23b, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022948743.1	2.8e-210	99.48	ubiquitin receptor RAD23b-like [Cucurbita moschata]	[more]
XP_022998454.1	4.8e-210	99.48	ubiquitin receptor RAD23b-like [Cucurbita maxima]	[more]
XP_023525748.1	8.2e-210	99.74	ubiquitin receptor RAD23b-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg04189 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84L33	1.8e-138	69.67	Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3	[more]
Q84L32	5.3e-127	65.04	Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=...	[more]
Q84L30	6.1e-107	57.51	Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2	[more]
Q84L31	3.3e-105	55.63	Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2	[more]
Q40742	3.8e-93	51.50	Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RA...	[more]

BLAST of Carg04189 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GA66	1.4e-210	99.48	Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111452322 PE=3 SV=1	[more]
A0A6J1KED6	2.3e-210	99.48	Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111493081 PE=3 SV=1	[more]
A0A1S3CI18	2.2e-192	91.47	Ubiquitin receptor RAD23 OS=Cucumis melo OX=3656 GN=LOC103501214 PE=3 SV=1	[more]
A0A6J1DGY9	8.3e-192	91.47	Ubiquitin receptor RAD23 OS=Momordica charantia OX=3673 GN=LOC111020977 PE=3 SV=...	[more]
A0A0A0LF05	4.1e-191	91.05	Ubiquitin receptor RAD23 OS=Cucumis sativus OX=3659 GN=Csa_3G710740 PE=3 SV=1	[more]

BLAST of Carg04189 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79650.1	1.2e-139	69.67	Rad23 UV excision repair protein family	[more]
AT1G79650.2	3.1e-138	69.31	Rad23 UV excision repair protein family	[more]
AT1G79650.4	5.2e-138	68.07	Rad23 UV excision repair protein family	[more]
AT1G16190.1	3.8e-128	65.04	Rad23 UV excision repair protein family	[more]
AT1G79650.3	3.0e-125	65.04	Rad23 UV excision repair protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004806	UV excision repair protein Rad23	PRINTS	PR01839	RAD23PROTEIN	coord: 337..353 score: 62.3 coord: 369..384 score: 62.78 coord: 354..368 score: 65.76 coord: 288..310 score: 59.68
IPR004806	UV excision repair protein Rad23	TIGRFAM	TIGR00601	TIGR00601	coord: 1..386 e-value: 2.2E-127 score: 423.3
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 1..75 e-value: 7.4E-24 score: 95.2
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 3..76 e-value: 1.1E-16 score: 60.3
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..79 score: 19.085346
IPR006636	Heat shock chaperonin-binding	SMART	SM00727	CBM	coord: 260..303 e-value: 3.3E-7 score: 40.0
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 343..380 e-value: 1.3E-7 score: 41.3 coord: 160..200 e-value: 8.7E-7 score: 38.5
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 343..378 e-value: 2.8E-11 score: 43.1 coord: 160..198 e-value: 1.2E-15 score: 57.0
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 158..201 score: 13.221613
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 341..381 score: 14.836119
IPR036353	XPC-binding domain superfamily	GENE3D	1.10.10.540		coord: 252..318 e-value: 1.7E-27 score: 96.8
IPR036353	XPC-binding domain superfamily	SUPERFAMILY	101238	XPC-binding domain	coord: 259..324
IPR015360	XPC-binding domain	PFAM	PF09280	XPC-binding	coord: 262..317 e-value: 1.1E-23 score: 82.7
None	No IPR available	GENE3D	1.10.8.10		coord: 153..203 e-value: 9.0E-23 score: 81.9
None	No IPR available	GENE3D	1.10.8.10		coord: 334..382 e-value: 6.5E-24 score: 85.7
None	No IPR available	GENE3D	3.10.20.90		coord: 1..80 e-value: 8.4E-26 score: 91.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..127
None	No IPR available	PANTHER	PTHR10621	UV EXCISION REPAIR PROTEIN RAD23	coord: 1..386
None	No IPR available	PANTHER	PTHR10621:SF32	UBIQUITIN RECEPTOR RAD23A-RELATED	coord: 1..386
None	No IPR available	CDD	cd01805	Ubl_Rad23	coord: 1..74 e-value: 2.83197E-30 score: 109.184
None	No IPR available	CDD	cd14379	UBA1_Rad23_plant	coord: 154..203 e-value: 3.99291E-31 score: 110.78
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..84
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 325..385
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 157..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04189-RA	Carg04189-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0031593	polyubiquitin modification-dependent protein binding
molecular_function	GO:0070628	proteasome binding
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0005515	protein binding