Carg04151 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg04151
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontransmembrane protein 256 homolog
LocationCarg_Chr19: 7933967 .. 7937457 (+)
RNA-Seq ExpressionCarg04151
SyntenyCarg04151
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTTCAAACCATCGTCATCATATGTGGAAATAAAAAAGGGGAAATTAAAAAGCCCTTCTCAAAACTCTTCTTGAAGTCATTCCATTTCAAGCCCAGAAAGCAAAGAACAAGATGAACCCACTTCACTGGCACAAAGTCGCTGGGATTTCTGGTAATATCACCCCCGATTCTCCTGCTGTAGATTCTTGATTTGGATTTTGATTCGATTTCGGCGTTAAACAGGCGTTGCAGCTCTTGGATTGGGCACGTACGGTTCCCATGTCTTCAAACCCCAAAATCCGGCTTATAAAGAGGTTGATTTGCTTCATCTTTCGCTGCTTTGAATCGATTTGATTTTGATTGTTTTTTTTTTCCTGTAAAATCCTGTGAAGGTTTGGCAAACGGCGTCTCTGTATCATTTGGTTCACACAGCGGCTCTGCTTGCTGCCCCTTCGACCAAGAACCCTAACATTGTAAGTTTTCCCCCTTTTTTCATTCCTCGCGTTTGCAGTATCGTTTCTGGATGTAAATTTTCTCCTTCTGATCATTTTGGGCAAGGCTTATTGATATCAAACGATTATTCAACTCGACCTAACCTGAAAGTAGGAACTAATCTTAAGCTTTAGAGTATGGTGGAAATCAAAGCACTAGATGTTGTGTTTGAATGTTTTGAATCCATTCAGATCTTTTTTCTTTCCCTGGTATAAATTCTTCACATGTTAGGTGGATTCAGCTATAACATTCAAGCCCACAAATAAAACTTGCCATATGTGTATACCCAAACTGTCTCGTTTTATTACCATTTGATATTTTGTTTTTGGAAATTGTGCTTATTTTCTCCAATTTCTTTACGAGGTCTTCATCTTTGCTAATTAAACACTTCAAATCTTAGTCAAATTCCAAATATATAAACAAGATTTTAAACTATTTTGTGGATTTTAAGAACATATGGCAAAATAAAGAAACTCATAGGTAGAACTTTTATAAACTCGCTTTCAAAAAACTTAATGGTTACGAAGTAAGACCTGAACTTTTAGTTTTTAGATTTCGCATTGATTTGATGGAAATTAATATTTAAGCTTATCTACAAGTCTAGCTTCTTCCCCAAATGTGTATATATCTATCTATCTATCTATATATATATATATAGATATATATATATATATAAAAGTATATGTATATATATATTGTCTAATATATCTTATAGGTAAAAGGGTACACACACATAATTTTATCTATGTCAATGTAAATGAATGAGGAACACACGTTAACGAATGTTTTAAAAGATAAAGTTACTCTTCCAAAATTTCCCTAATATTTAAGTTGGTTTTGTGTTTTTCCCCTACTTTGATGGGTCCTTTGATGCTATCTTTATGTTTTTTTTTGGACAGTTTGGAGGCCTTTTGACTGCTGGAATTCTTGCATTTTCGGGCACGTAAGACCCATTTTTTGTTTCATCTTTGATGTTTGTTTGGATCTCTCTCTCTTTTGTTTCTATTTGATTTCGCATTCATGTGTCTAAGTTTCCATGATTTACCTGTCACAACATTTCTCAATCTGAAGCTGAATTCATATTCAGTTTTCTTTTGCCCTTTTAACTGATAAGCACAACATTTAATTGATATGATGAATTATACAAAAGAGAGAATAAAAATCCCAAAAAACACTTGATCGACTGATGAGTTAGAAAAGAAAAGCTGTTGAGTTGGCTGAGAAAAATTGTACATGAAGTGAGACTAGTAAGAAGTATGAGACGAGAAAAGATCACCGATAGGAGAAGCTATTGAGAAAAATGTGTACATGAGAAAATGGGCAAAGGGTAATTTATGAAGGAAAAACGTGTACGATGAGAGAACTTAGTGAGAGAAGTGAGAGATTAGATGAAGAAAGTTTGTCTGAAAGAGATCGATTATGAAGTGTTTGAGCCTAATGCATATGATAAACCACACCCATTAGTGACTCCCTTGCAGAGCACCTAGTTATTAGTTGTGAGATCCCACTCGGTTGGAGAGGAGAATGAAGCATTCCATAAGAATGTAGAGAGAAGTGAGAGATTAGATGAAGAAAGTTTGTCCGAAAGAGATCGATTATGAAGTGTTTGAACCTAATGCATCGGATAAACCACGCCCATTAGTGACTTCCTTGCAAACCACCTAGTTATTAGTTGTGAGTGTTGGATGATGGAAGTCCCACATCGACTAATTTAGGGTGTGATCATGGGTTTATAAGTGAGGAATACTAACTCCATTGGTGTGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCGTCTAACATGGTATCAGAGCCATGCCCTAAACTTAGTCGTGCCAATAGATTGGTAAAATCCTCAAATCCTCAAATATCGAACAAAGAACTCTTAAAGAAAAGGAGCTAAGCCCCTCCTCGAAGGCAGTCAAAAATGACTAAGACTCCAAAGGAGTCGAGCCTCGATTAAGGGGAGGCGCACTTTGTTCGAGGGGAGGTGTTGGATGATGGAAGTCCCACATCGTCTAATTTAGGGTGTGATCATGGGTTTATAAGTGAGGAATACTAACTCCGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCGTCTAACAGTGAGATCCCACGTCAGTGTGGAAACCTCTTCCTAGCAGATGTGTTCTTCCTAGCAGATGTGTTTTAAAAACTTTGAGGGGAAGTCCCGGAAGGGAAAGCCTAAAAAGGACCATATTTGCCAGCGGTGGACTTGGGCTGTTGCATTAGTGCTTTTTTTTTTTTTTTTTTTTTGTTCTTTTCGTTTCTTTCTTTATTGAATCTGATCCAAAGGGCTTAAAAAAGGTATGTAGGACTGATTGAGCATAAAACAGCTTTGGACTCGATTGAAATCACTTCCAGTTTCCATTTAGCAGCTCCATATTGAACTCATATGTCTGTTTCAGAGATGTATAAGACCGTGTGCTTCCATTGCAGGTGCTATACTGTGGCCCTTCTTGAAGATAGAAAATACTCTACCTTAGCTCCATTTGGTGGCTTTGCTTTCATTGGTGCATGGGCTAGCTTGCTCTTCTAAATTTACCCAGTTTCGATATCTTTTCGATTACTTATGGCTTCACGTATACTTCTGCACATATTCTGTGAAGAATTTCGATGTTTTTCGATAAAAGATATCCGAATCTCGGAAGCTTACTCATCTTCTTCCTCTTCCTCAGATTGTAAAAACGTGAAAGAATCCAAGTGCAGTATAAATGGAATAGTTCATTCATGAATTTAGAGGCAAAAAAATGGTTCAGAATAAAGAGTAGATTCATTAAAATCAGTTCATTGAGCAGAAAATTAGAGGAATTTTTTTTTATTTAAAATGTAACTATTGGATATATTATGTATGTAATAGATTTCTGAACGATAAAATTTTCATTTTTT

mRNA sequence

AATTTCAAACCATCGTCATCATATGTGGAAATAAAAAAGGGGAAATTAAAAAGCCCTTCTCAAAACTCTTCTTGAAGTCATTCCATTTCAAGCCCAGAAAGCAAAGAACAAGATGAACCCACTTCACTGGCACAAAGTCGCTGGGATTTCTGGCGTTGCAGCTCTTGGATTGGGCACGTACGGTTCCCATGTCTTCAAACCCCAAAATCCGGCTTATAAAGAGGTTTGGCAAACGGCGTCTCTGTATCATTTGGTTCACACAGCGGCTCTGCTTGCTGCCCCTTCGACCAAGAACCCTAACATTTTTGGAGGCCTTTTGACTGCTGGAATTCTTGCATTTTCGGGCACGTGCTATACTGTGGCCCTTCTTGAAGATAGAAAATACTCTACCTTAGCTCCATTTGGTGGCTTTGCTTTCATTGGTGCATGGGCTAGCTTGCTCTTCTAAATTTACCCAGTTTCGATATCTTTTCGATTACTTATGGCTTCACGTATACTTCTGCACATATTCTGTGAAGAATTTCGATGTTTTTCGATAAAAGATATCCGAATCTCGGAAGCTTACTCATCTTCTTCCTCTTCCTCAGATTGTAAAAACGTGAAAGAATCCAAGTGCAGTATAAATGGAATAGTTCATTCATGAATTTAGAGGCAAAAAAATGGTTCAGAATAAAGAGTAGATTCATTAAAATCAGTTCATTGAGCAGAAAATTAGAGGAATTTTTTTTTATTTAAAATGTAACTATTGGATATATTATGTATGTAATAGATTTCTGAACGATAAAATTTTCATTTTTT

Coding sequence (CDS)

ATGAACCCACTTCACTGGCACAAAGTCGCTGGGATTTCTGGCGTTGCAGCTCTTGGATTGGGCACGTACGGTTCCCATGTCTTCAAACCCCAAAATCCGGCTTATAAAGAGGTTTGGCAAACGGCGTCTCTGTATCATTTGGTTCACACAGCGGCTCTGCTTGCTGCCCCTTCGACCAAGAACCCTAACATTTTTGGAGGCCTTTTGACTGCTGGAATTCTTGCATTTTCGGGCACGTGCTATACTGTGGCCCTTCTTGAAGATAGAAAATACTCTACCTTAGCTCCATTTGGTGGCTTTGCTTTCATTGGTGCATGGGCTAGCTTGCTCTTCTAA

Protein sequence

MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTKNPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF
Homology
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BLAST of Carg04151 vs. NCBI nr
Match: XP_022953076.1 (transmembrane protein 256 homolog [Cucurbita moschata] >KAG7011866.1 hypothetical protein SDJN02_26773 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 231.9 bits (590), Expect = 2.7e-57
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60
           MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK
Sbjct: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 112
           NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF
Sbjct: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 111

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BLAST of Carg04151 vs. NCBI nr
Match: KAG6572230.1 (hypothetical protein SDJN03_28958, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 229.2 bits (583), Expect = 1.8e-56
Identity = 109/111 (98.20%), Postives = 110/111 (99.10%), Query Frame = 0 

Query: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60
           MNPLHWHKVAGISG AALGLGTYG+HVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK
Sbjct: 57  MNPLHWHKVAGISGAAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 116

Query: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 112
           NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF
Sbjct: 117 NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 167

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BLAST of Carg04151 vs. NCBI nr
Match: XP_022969303.1 (transmembrane protein 256 homolog [Cucurbita maxima])

HSP 1 Score: 228.4 bits (581), Expect = 3.0e-56
Identity = 109/111 (98.20%), Postives = 110/111 (99.10%), Query Frame = 0 

Query: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60
           MNPLHWHKVA ISGVAALGLGTYG+HVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK
Sbjct: 1   MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 112
           NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF
Sbjct: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 111

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BLAST of Carg04151 vs. NCBI nr
Match: XP_023554646.1 (transmembrane protein 256 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 227.3 bits (578), Expect = 6.7e-56
Identity = 108/111 (97.30%), Postives = 110/111 (99.10%), Query Frame = 0 

Query: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60
           MNPLHWHKVA ISGV+ALGLGTYG+HVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK
Sbjct: 1   MNPLHWHKVAAISGVSALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 112
           NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF
Sbjct: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 111

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BLAST of Carg04151 vs. NCBI nr
Match: XP_022135760.1 (transmembrane protein 256 homolog [Momordica charantia])

HSP 1 Score: 222.2 bits (565), Expect = 2.2e-54
Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 0 

Query: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60
           MNPL WHKVA ISGVAALGLGTYG+HVFKPQNPAYKEVWQTASLYHLVHTAALL APSTK
Sbjct: 1   MNPLLWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLVAPSTK 60

Query: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 112
           NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAF+GAWASLLF
Sbjct: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFVGAWASLLF 111

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BLAST of Carg04151 vs. ExPASy Swiss-Prot
Match: A4K526 (Transmembrane protein 256 homolog OS=Bufo gargarizans OX=30331 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.1e-16
Identity = 42/106 (39.62%), Postives = 64/106 (60.38%), Query Frame = 0 

Query: 6   WHKVAGISGVAALGLGTYGSHVFK--PQNPAYKEVWQTASLYHLVHTAALLAAPSTKNPN 65
           W ++  +SG  A+  G YG+H F+   ++   KE+++T + YH +H+ ALLA P  + P 
Sbjct: 7   WGRLGAVSGALAVTAGAYGAHGFRRSDRDEYLKELFETGNRYHFLHSLALLAVPHCRRPL 66

Query: 66  IFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASL 110
           + G LLT+GI+ FSGT Y  AL  D   +  AP+GG   I  WA++
Sbjct: 67  LAGSLLTSGIVLFSGTFYYQALSGDPTLTKAAPYGGTLLILGWAAM 112

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BLAST of Carg04151 vs. ExPASy Swiss-Prot
Match: Q568J8 (Transmembrane protein 256 OS=Danio rerio OX=7955 GN=tmem256 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.9e-13
Identity = 40/104 (38.46%), Postives = 57/104 (54.81%), Query Frame = 0 

Query: 8   KVAGISGVAALGLGTYGSHVFKPQNPA--YKEVWQTASLYHLVHTAALLAAPSTKNPNIF 67
           +VAGISG  A+  G YG+H F+    +   +E++ TA+ YH  H+ ALL A   + P + 
Sbjct: 9   RVAGISGALAVAAGAYGAHGFRRSEASDYQRELFDTANKYHFYHSLALLGAARCRKPALA 68

Query: 68  GGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASL 110
           G +L  G+  F G  Y   L  D  +S LAP GG   I  WA++
Sbjct: 69  GVILLTGMGCFCGPLYHQPLTNDPSFSKLAPIGGSLLIVGWAAM 112

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BLAST of Carg04151 vs. ExPASy Swiss-Prot
Match: Q5F285 (Transmembrane protein 256 OS=Mus musculus OX=10090 GN=Tmem256 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.8e-11
Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 0 

Query: 6   WHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTKNPNIF 65
           + ++  +SG  ALGL +YG+H  +  +   KE++  A+ +H +H+ ALL  PS + P   
Sbjct: 8   FRRLGALSGAGALGLASYGAHGAQFPDAYGKELFDKANKHHFLHSLALLGVPSCRKPVWA 67

Query: 66  GGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 112
           G LL +G   F  + Y  AL  D    TL P GG   I  W +L F
Sbjct: 68  GLLLASGTTLFCTSFYYQALSGDTSIQTLGPVGGSLLILGWLALAF 113

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BLAST of Carg04151 vs. ExPASy Swiss-Prot
Match: Q8N2U0 (Transmembrane protein 256 OS=Homo sapiens OX=9606 GN=TMEM256 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.6e-10
Identity = 36/104 (34.62%), Postives = 55/104 (52.88%), Query Frame = 0 

Query: 6   WHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTKNPNIF 65
           + ++  +SG AALG  +YG+H  +  +   KE++  A+ +H +H+ ALL  P  + P   
Sbjct: 8   FRRLGALSGAAALGFASYGAHGAQFPDAYGKELFDKANKHHFLHSLALLGVPHCRKPLWA 67

Query: 66  GGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASL 110
           G LL +G   F  + Y  AL  D    TLAP GG   +  W +L
Sbjct: 68  GLLLASGTTLFCTSFYYQALSGDPSIQTLAPAGGTLLLLGWLAL 111

[Close]
BLAST of Carg04151 vs. ExPASy Swiss-Prot
Match: Q2YS64 (UPF0382 membrane protein SAB0533 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) OX=273036 GN=SAB0533 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.7e-09
Identity = 34/108 (31.48%), Postives = 58/108 (53.70%), Query Frame = 0 

Query: 9   VAGISGVAALGLGTYGSHVFKPQ-NPAYKEVWQTASLYHLVHTAALL-----AAPSTKNP 68
           +  ++ + A+G G +G+H  + + +  Y  VW+ A+ Y + H  ALL     +  ++ N 
Sbjct: 7   LGALNAMMAVGTGAFGAHGLQGKISDHYLSVWEKATTYQMYHGLALLIIGVISGTTSINV 66

Query: 69  NIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLL 111
           N  G L+ AGI+ FSG+ Y + L + +   T+ P GG  FI  W  L+
Sbjct: 67  NWAGWLIFAGIIFFSGSLYILVLTQIKVLGTITPIGGVLFIIGWIMLI 114

[Close]
BLAST of Carg04151 vs. ExPASy TrEMBL
Match: A0A6J1GM00 (transmembrane protein 256 homolog OS=Cucurbita moschata OX=3662 GN=LOC111455589 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.3e-57
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60
           MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK
Sbjct: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 112
           NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF
Sbjct: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 111

[Close]
BLAST of Carg04151 vs. ExPASy TrEMBL
Match: A0A6J1I0K9 (transmembrane protein 256 homolog OS=Cucurbita maxima OX=3661 GN=LOC111468350 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.5e-56
Identity = 109/111 (98.20%), Postives = 110/111 (99.10%), Query Frame = 0 

Query: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60
           MNPLHWHKVA ISGVAALGLGTYG+HVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK
Sbjct: 1   MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 112
           NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF
Sbjct: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 111

[Close]
BLAST of Carg04151 vs. ExPASy TrEMBL
Match: A0A6J1C1Y8 (transmembrane protein 256 homolog OS=Momordica charantia OX=3673 GN=LOC111007644 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.0e-54
Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 0 

Query: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60
           MNPL WHKVA ISGVAALGLGTYG+HVFKPQNPAYKEVWQTASLYHLVHTAALL APSTK
Sbjct: 1   MNPLLWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLVAPSTK 60

Query: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 112
           NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAF+GAWASLLF
Sbjct: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFVGAWASLLF 111

[Close]
BLAST of Carg04151 vs. ExPASy TrEMBL
Match: A0A0A0K1T6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032280 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.0e-54
Identity = 105/111 (94.59%), Postives = 109/111 (98.20%), Query Frame = 0 

Query: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60
           MNPL+WHKVA ISGVAALGLGTYG+H FKP+NPAYKEVWQTASLYHLVHTAALLAAPSTK
Sbjct: 1   MNPLYWHKVAAISGVAALGLGTYGAHGFKPKNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 112
           NPNIFGGLLTAGILAFSGTCYTVALLEDRKYS+LAPFGGFAFIGAWASLLF
Sbjct: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSSLAPFGGFAFIGAWASLLF 111

[Close]
BLAST of Carg04151 vs. ExPASy TrEMBL
Match: A0A1S3CG60 (transmembrane protein 256 homolog OS=Cucumis melo OX=3656 GN=LOC103500518 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.0e-54
Identity = 105/111 (94.59%), Postives = 109/111 (98.20%), Query Frame = 0 

Query: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60
           MNPL+WHKVA ISGVAALGLGTYG+H FKP+NPAYKEVWQTASLYHLVHTAALLAAPSTK
Sbjct: 46  MNPLYWHKVAAISGVAALGLGTYGAHGFKPKNPAYKEVWQTASLYHLVHTAALLAAPSTK 105

Query: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 112
           NPNIFGGLLTAGILAFSGTCYTVALLEDRKYS+LAPFGGFAFIGAWASLLF
Sbjct: 106 NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSSLAPFGGFAFIGAWASLLF 156

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BLAST of Carg04151 vs. TAIR 10
Match: AT2G04900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF423 (InterPro:IPR006696); Has 1824 Blast hits to 1824 proteins in 878 species: Archae - 0; Bacteria - 1498; Metazoa - 118; Fungi - 14; Plants - 58; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). )

HSP 1 Score: 199.5 bits (506), Expect = 1.4e-51
Identity = 93/111 (83.78%), Postives = 104/111 (93.69%), Query Frame = 0 

Query: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60
           M+P  WHKVA ISG+AALGLGTYG+HVFKP+NP+YK+VWQTASLYHLVHTAAL++APSTK
Sbjct: 18  MDPRMWHKVAAISGMAALGLGTYGAHVFKPENPSYKQVWQTASLYHLVHTAALVSAPSTK 77

Query: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 112
            PNIFGGLLTAGI+AFSGTCY VAL EDRK+STLAPFGGFAFI AWA+LLF
Sbjct: 78  YPNIFGGLLTAGIVAFSGTCYMVALREDRKFSTLAPFGGFAFIAAWATLLF 128

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BLAST of Carg04151 vs. TAIR 10
Match: AT2G04900.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF423 (InterPro:IPR006696); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 142.5 bits (358), Expect = 2.0e-34
Identity = 65/81 (80.25%), Postives = 75/81 (92.59%), Query Frame = 0 

Query: 1  MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60
          M+P  WHKVA ISG+AALGLGTYG+HVFKP+NP+YK+VWQTASLYHLVHTAAL++APSTK
Sbjct: 18 MDPRMWHKVAAISGMAALGLGTYGAHVFKPENPSYKQVWQTASLYHLVHTAALVSAPSTK 77

Query: 61 NPNIFGGLLTAGILAFSGTCY 82
           PNIFGGLLTAGI+AFSG  +
Sbjct: 78 YPNIFGGLLTAGIVAFSGVIW 98

The following BLAST results are available for this feature:
BLAST of Carg04151 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022953076.12.7e-57100.00transmembrane protein 256 homolog [Cucurbita moschata] >KAG7011866.1 hypothetica... [more]
KAG6572230.11.8e-5698.20hypothetical protein SDJN03_28958, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022969303.13.0e-5698.20transmembrane protein 256 homolog [Cucurbita maxima][more]
XP_023554646.16.7e-5697.30transmembrane protein 256 homolog [Cucurbita pepo subsp. pepo][more]
XP_022135760.12.2e-5495.50transmembrane protein 256 homolog [Momordica charantia][more]
BLAST of Carg04151 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A4K5264.1e-1639.62Transmembrane protein 256 homolog OS=Bufo gargarizans OX=30331 PE=3 SV=1[more]
Q568J81.9e-1338.46Transmembrane protein 256 OS=Danio rerio OX=7955 GN=tmem256 PE=3 SV=1[more]
Q5F2851.8e-1135.85Transmembrane protein 256 OS=Mus musculus OX=10090 GN=Tmem256 PE=1 SV=1[more]
Q8N2U02.6e-1034.62Transmembrane protein 256 OS=Homo sapiens OX=9606 GN=TMEM256 PE=3 SV=1[more]
Q2YS643.7e-0931.48UPF0382 membrane protein SAB0533 OS=Staphylococcus aureus (strain bovine RF122 /... [more]
BLAST of Carg04151 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GM001.3e-57100.00transmembrane protein 256 homolog OS=Cucurbita moschata OX=3662 GN=LOC111455589 ... [more]
A0A6J1I0K91.5e-5698.20transmembrane protein 256 homolog OS=Cucurbita maxima OX=3661 GN=LOC111468350 PE... [more]
A0A6J1C1Y81.0e-5495.50transmembrane protein 256 homolog OS=Momordica charantia OX=3673 GN=LOC111007644... [more]
A0A0A0K1T64.0e-5494.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032280 PE=4 SV=1[more]
A0A1S3CG604.0e-5494.59transmembrane protein 256 homolog OS=Cucumis melo OX=3656 GN=LOC103500518 PE=4 S... [more]
BLAST of Carg04151 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G04900.11.4e-5183.78unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
AT2G04900.22.0e-3480.25unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006696Protein of unknown function DUF423PFAMPF04241DUF423coord: 20..99
e-value: 5.2E-20
score: 71.5
IPR006696Protein of unknown function DUF423PANTHERPTHR43461TRANSMEMBRANE PROTEIN 256coord: 5..111

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg04151-RACarg04151-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane