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Carg04081 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCTGTATCACCTCACTCTTATCCTGTCGGAGATCAAGAAAAGGACAAGACGGTTGCAGACGCGGCGGCGAGCCCAGATGTGACGAGGCATATTCGGTTGAAGTCTTCACATTCCACCCAAGTACTAGAGAAGGCGGTGGTGCTGCGGCGGATCCGGCAGCGGAAGCGTGTTAACAAGTTCCAGGCAGTGGTCGGAGCTCTGTTCAGTTCGCCTTTCGGCGACAAAACCGGCGAGGCTCGTCAGAGAAAATGGGTGGATGAACCCTTCACTTCACTCTAG ATGGCGGCTGTATCACCTCACTCTTATCCTGTCGGAGATCAAGAAAAGGACAAGACGGTTGCAGACGCGGCGGCGAGCCCAGATGTGACGAGGCATATTCGGTTGAAGTCTTCACATTCCACCCAAGTACTAGAGAAGGCGGTGGTGCTGCGGCGGATCCGGCAGCGGAAGCGTGTTAACAAGTTCCAGGCAGTGGTCGGAGCTCTGTTCAGTTCGCCTTTCGGCGACAAAACCGGCGAGGCTCGTCAGAGAAAATGGGTGGATGAACCCTTCACTTCACTCTAG ATGGCGGCTGTATCACCTCACTCTTATCCTGTCGGAGATCAAGAAAAGGACAAGACGGTTGCAGACGCGGCGGCGAGCCCAGATGTGACGAGGCATATTCGGTTGAAGTCTTCACATTCCACCCAAGTACTAGAGAAGGCGGTGGTGCTGCGGCGGATCCGGCAGCGGAAGCGTGTTAACAAGTTCCAGGCAGTGGTCGGAGCTCTGTTCAGTTCGCCTTTCGGCGACAAAACCGGCGAGGCTCGTCAGAGAAAATGGGTGGATGAACCCTTCACTTCACTCTAG MAAVSPHSYPVGDQEKDKTVADAAASPDVTRHIRLKSSHSTQVLEKAVVLRRIRQRKRVNKFQAVVGALFSSPFGDKTGEARQRKWVDEPFTSL Homology
BLAST of Carg04081 vs. NCBI nr
Match: KAG6585633.1 (hypothetical protein SDJN03_18366, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020540.1 hypothetical protein SDJN02_17225, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 186.4 bits (472), Expect = 1.1e-43 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of Carg04081 vs. NCBI nr
Match: KAG6598407.1 (hypothetical protein SDJN03_08185, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 123.2 bits (308), Expect = 1.2e-24 Identity = 72/103 (69.90%), Postives = 76/103 (73.79%), Query Frame = 0
BLAST of Carg04081 vs. NCBI nr
Match: KAA0065270.1 (hypothetical protein E6C27_scaffold82G006120 [Cucumis melo var. makuwa]) HSP 1 Score: 116.7 bits (291), Expect = 1.1e-22 Identity = 69/103 (66.99%), Postives = 74/103 (71.84%), Query Frame = 0
BLAST of Carg04081 vs. NCBI nr
Match: KGN62559.1 (hypothetical protein Csa_022598 [Cucumis sativus]) HSP 1 Score: 101.3 bits (251), Expect = 4.7e-18 Identity = 65/113 (57.52%), Postives = 74/113 (65.49%), Query Frame = 0
BLAST of Carg04081 vs. NCBI nr
Match: KAG7029360.1 (Wall-associated receptor kinase-like 14, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 94.0 bits (232), Expect = 7.5e-16 Identity = 59/89 (66.29%), Postives = 63/89 (70.79%), Query Frame = 0
BLAST of Carg04081 vs. ExPASy TrEMBL
Match: A0A5A7VDJ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G006120 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 5.2e-23 Identity = 69/103 (66.99%), Postives = 74/103 (71.84%), Query Frame = 0
BLAST of Carg04081 vs. ExPASy TrEMBL
Match: A0A0A0LNJ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360760 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.3e-18 Identity = 65/113 (57.52%), Postives = 74/113 (65.49%), Query Frame = 0
BLAST of Carg04081 vs. ExPASy TrEMBL
Match: A0A7J7D397 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW11G00807 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.5e-09 Identity = 39/87 (44.83%), Postives = 55/87 (63.22%), Query Frame = 0
BLAST of Carg04081 vs. ExPASy TrEMBL
Match: A0A2N9G0R5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20842 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.9e-09 Identity = 37/68 (54.41%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of Carg04081 vs. ExPASy TrEMBL
Match: A0A6A4LFT7 (Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_10847 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.5e-09 Identity = 35/68 (51.47%), Postives = 47/68 (69.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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