Carg04061 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg04061
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of unknown function (DUF1195)
Location	Carg_Chr12: 2864756 .. 2866546 (-)
RNA-Seq Expression	Carg04061
Synteny	Carg04061

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTCCCATTTGCATTACGCCAACACCCTCCATTAATTTCTCATTCTACTGTTCACCCAACACTCAAAACCCCACAAACCCCAAAATGAAATCCGAGTTTTCACCGACAATGGCGGCTCCGAACAAGGAGACCCCATGTTTCCTATCTAGAAAGGCTCGCTACAAGTTCTGGGCCTTGGCCGCCATTCTTCTCCTCGCCTTCTGGTCCATGTTCACCGGCTCCGTCTCACTCAAATGGTCCGCCGCAACCTTAGCCAAACTCTACGACGGCCCCCGCAAGCCGATCTTTGATGATCTTGATATTTTGGTGATCTTTTTAGCCGTTTTCCTTGGTGGGTTTTGGTTTTTACTGTTGTTTGTGGTGTTTTAGGGCTTTGTTTTTTTTGCTGATTACTAGGAAGTTGAAGAGCGGGAGAGGGTTGTCCGCCATATGTGGAATCTGTACACCCACGGCGGCGGCGGCGGCCGGTTGCCTAGATTCTGGTCGGAGGCTTTTGAAGCGGCGTACGAGGATTTGATCGGTGATGTTCCTGCCGTTCGAGATGCTGCACTTTTGGAGATCGCTAGAATGTCTCTGCGATCTCTTCAAGTCGACCCAATTCCGACCAAATCCAAGGTTAGCCATTGTTTCACCTTAAAATCCCCGAGATTAAAAATGTTCTTGAATTGGTTTTTGAGAACATGGGTCTCCCACTGAAGTGATTATTAGTTAGTTCTTCAACTCGAAACATAAAAATTTAAGAAATGGGTTTTAGAGATTGAGATTTGCAGCAACATCTACTCGTTTTGTGTTTTTTTTTTTTTTTTTTTTGTTGTCGAGTCAAAAATCATTATGAGGTGGGATATTATTCTTCGAGATCGAAGATTGACCTTTAAAATGATCATGTGATATCTCACATTGATTGAAGAGGAAAACCAAAATACCCTTTATAAGGGTGTGGAAACCTTCTCTTTCTCTAACAGATGCATCTTAAAACCTCGAGGGAAGCTAATATAACCGAAATACCCTTTATAAGCGTGTGGAAACCTTCCCTTCCCCTAGCAAATGCATTTTAAAACCTTGAGGGAAACTAATATCAACTTTGGGTTGTGATTTGCAGAGAGAACAGATTGAAAAGCTCAAAACAAAGGCAATTGGGTGAGTAGCTGCGGCGCTGTGCTAAGTTTGTAGCCGTGGGGGTGGGGTGTGTTCATTTGGGTGATGCTATGTTAAAAAAAACAATGGAATATACAAAATTTACCATACCAATCCAATGTCAATGGTTGTCTCTTTTGCTTTGTTGATTCTCTCATTGTTATGAAGGTGGCGCCTACGCTTTTTGGTCACATGCAACCATTTGTCACATAGCTTTGAATTCTGAGAACAATTTGTCGTACTACAGCTTTCAGATCTTGTGTTTTGTGTAGTTTATGGCAGAATAATATGAACATATAAGTCAACCTATTCAGACTTGGAAGTGAAGAATATATGCCAAATATTGCTGACTTACTAAATAAAGTAATATAGTTGAGAGGTTCGGTCAGTTTTGATTGTTATATCCGATGCTATCGACAGAGAAGTAAAACGTTGAATAAGGATGGAATTAAGACTGCTTTATCGTCTCCTAGAAAGTTATGCACAATCGTATACTAAGGTGCTCTCGGTTGATTTTGCTATGCCACAAGCTAGGCCTCGATGAAGAGCCAAAAGGTCAAGAGTTACTAATTCCCCATGATTGGTTTAGTAGATCAATTGGTTGAAGTAACCAGGACGGGTAGACTAACTGAACAAGACCAGCTCGAATCATAAAC

mRNA sequence

AATTCCCATTTGCATTACGCCAACACCCTCCATTAATTTCTCATTCTACTGTTCACCCAACACTCAAAACCCCACAAACCCCAAAATGAAATCCGAGTTTTCACCGACAATGGCGGCTCCGAACAAGGAGACCCCATGTTTCCTATCTAGAAAGGCTCGCTACAAGTTCTGGGCCTTGGCCGCCATTCTTCTCCTCGCCTTCTGGTCCATGTTCACCGGCTCCGTCTCACTCAAATGGTCCGCCGCAACCTTAGCCAAACTCTACGACGGCCCCCGCAAGCCGATCTTTGATGATCTTGATATTTTGGAAGTTGAAGAGCGGGAGAGGGTTGTCCGCCATATGTGGAATCTGTACACCCACGGCGGCGGCGGCGGCCGGTTGCCTAGATTCTGGTCGGAGGCTTTTGAAGCGGCGTACGAGGATTTGATCGGTGATGTTCCTGCCGTTCGAGATGCTGCACTTTTGGAGATCGCTAGAATGTCTCTGCGATCTCTTCAAGTCGACCCAATTCCGACCAAATCCAAGAGAGAACAGATTGAAAAGCTCAAAACAAAGGCAATTGGGTGAGTAGCTGCGGCGCTGTGCTAAGTTTGTAGCCGTGGGGGTGGGGTGTGTTCATTTGGGTGATGCTATGTTAAAAAAAACAATGGAATATACAAAATTTACCATACCAATCCAATGTCAATGGTTGTCTCTTTTGCTTTGTTGATTCTCTCATTGTTATGAAGGTGGCGCCTACGCTTTTTGGTCACATGCAACCATTTGTCACATAGCTTTGAATTCTGAGAACAATTTGTCGTACTACAGCTTTCAGATCTTGTGTTTTGTGTAGTTTATGGCAGAATAATATGAACATATAAGTCAACCTATTCAGACTTGGAAGTGAAGAATATATGCCAAATATTGCTGACTTACTAAATAAAGTAATATAGTTGAGAGGTTCGGTCAGTTTTGATTGTTATATCCGATGCTATCGACAGAGAAGTAAAACGTTGAATAAGGATGGAATTAAGACTGCTTTATCGTCTCCTAGAAAGTTATGCACAATCGTATACTAAGGTGCTCTCGGTTGATTTTGCTATGCCACAAGCTAGGCCTCGATGAAGAGCCAAAAGGTCAAGAGTTACTAATTCCCCATGATTGGTTTAGTAGATCAATTGGTTGAAGTAACCAGGACGGGTAGACTAACTGAACAAGACCAGCTCGAATCATAAAC

Coding sequence (CDS)

ATGAAATCCGAGTTTTCACCGACAATGGCGGCTCCGAACAAGGAGACCCCATGTTTCCTATCTAGAAAGGCTCGCTACAAGTTCTGGGCCTTGGCCGCCATTCTTCTCCTCGCCTTCTGGTCCATGTTCACCGGCTCCGTCTCACTCAAATGGTCCGCCGCAACCTTAGCCAAACTCTACGACGGCCCCCGCAAGCCGATCTTTGATGATCTTGATATTTTGGAAGTTGAAGAGCGGGAGAGGGTTGTCCGCCATATGTGGAATCTGTACACCCACGGCGGCGGCGGCGGCCGGTTGCCTAGATTCTGGTCGGAGGCTTTTGAAGCGGCGTACGAGGATTTGATCGGTGATGTTCCTGCCGTTCGAGATGCTGCACTTTTGGAGATCGCTAGAATGTCTCTGCGATCTCTTCAAGTCGACCCAATTCCGACCAAATCCAAGAGAGAACAGATTGAAAAGCTCAAAACAAAGGCAATTGGGTGA

Protein sequence

MKSEFSPTMAAPNKETPCFLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAATLAKLYDGPRKPIFDDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSLQVDPIPTKSKREQIEKLKTKAIG

Homology

[Close]

BLAST of Carg04061 vs. NCBI nr
Match: KAG7020520.1 (hypothetical protein SDJN02_17205 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323.6 bits (828), Expect = 9.9e-85
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MKSEFSPTMAAPNKETPCFLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAATLAKLY 60
           MKSEFSPTMAAPNKETPCFLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAATLAKLY
Sbjct: 1   MKSEFSPTMAAPNKETPCFLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAATLAKLY 60

Query: 61  DGPRKPIFDDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYEDLIGDVPA 120
           DGPRKPIFDDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYEDLIGDVPA
Sbjct: 61  DGPRKPIFDDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYEDLIGDVPA 120

Query: 121 VRDAALLEIARMSLRSLQVDPIPTKSKREQIEKLKTKAIG 161
           VRDAALLEIARMSLRSLQVDPIPTKSKREQIEKLKTKAIG
Sbjct: 121 VRDAALLEIARMSLRSLQVDPIPTKSKREQIEKLKTKAIG 160

[Close]

BLAST of Carg04061 vs. NCBI nr
Match: KAG6585609.1 (hypothetical protein SDJN03_18342, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 315.1 bits (806), Expect = 3.5e-82
Identity = 158/161 (98.14%), Postives = 158/161 (98.14%), Query Frame = 0


Query: 1   MKSEFSPTMAAPNKETPCFLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAATLAKLY 60
           MKSE SPTMAAPNKETPCFLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAAT AKLY
Sbjct: 1   MKSELSPTMAAPNKETPCFLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAATFAKLY 60

Query: 61  DGPRKPIFDDLDILEVEERERVVRHMWNLYTH-GGGGGRLPRFWSEAFEAAYEDLIGDVP 120
           DGPRKPIFDDLDILEVEERERVVRHMWNLYTH GGGGGRLPRFWSEAFEAAYEDLIGDVP
Sbjct: 61  DGPRKPIFDDLDILEVEERERVVRHMWNLYTHGGGGGGRLPRFWSEAFEAAYEDLIGDVP 120

Query: 121 AVRDAALLEIARMSLRSLQVDPIPTKSKREQIEKLKTKAIG 161
           AVRDAALLEIARMSLRSLQVDPIPTKSKREQIEKLKTKAIG
Sbjct: 121 AVRDAALLEIARMSLRSLQVDPIPTKSKREQIEKLKTKAIG 161

[Close]

BLAST of Carg04061 vs. NCBI nr
Match: XP_022951121.1 (uncharacterized protein LOC111454063 [Cucurbita moschata])

HSP 1 Score: 298.5 bits (763), Expect = 3.4e-77
Identity = 148/161 (91.93%), Postives = 153/161 (95.03%), Query Frame = 0


Query: 1   MKSEFSPTMAAPNKETPCFLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAATLAKLY 60
           MKSE SPTMAAPNKETPCFLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAAT AKLY
Sbjct: 1   MKSELSPTMAAPNKETPCFLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAATFAKLY 60

Query: 61  DGPRKPIFDDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYEDLIGDVPA 120
           DGPRKPIFDDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYEDLIGDVPA
Sbjct: 61  DGPRKPIFDDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYEDLIGDVPA 120

Query: 121 VRDAALLEIARMSLRSLQVDPIPTKSKRE-QIEKLKTKAIG 161
           VRDAALLEIARMSLRSLQVDPIPTKSK E +++  K + +G
Sbjct: 121 VRDAALLEIARMSLRSLQVDPIPTKSKSENRLKSSKQRQLG 161

[Close]

BLAST of Carg04061 vs. NCBI nr
Match: XP_023001827.1 (uncharacterized protein LOC111495903 [Cucurbita maxima])

HSP 1 Score: 295.4 bits (755), Expect = 2.9e-76
Identity = 146/161 (90.68%), Postives = 152/161 (94.41%), Query Frame = 0


Query: 1   MKSEFSPTMAAPNKETPCFLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAATLAKLY 60
           MKSE SPTMAAPNKETPCFLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAAT AKLY
Sbjct: 1   MKSELSPTMAAPNKETPCFLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAATFAKLY 60

Query: 61  DGPRKPIFDDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYEDLIGDVPA 120
           DGPRKPIFDDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYE+LIGDVPA
Sbjct: 61  DGPRKPIFDDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYEELIGDVPA 120

Query: 121 VRDAALLEIARMSLRSLQVDPIPTKSKRE-QIEKLKTKAIG 161
           VRD ALLEIARMSLRSLQVDPIPTKSK E +++  K + +G
Sbjct: 121 VRDVALLEIARMSLRSLQVDPIPTKSKSENRLKSSKQRQLG 161

[Close]

BLAST of Carg04061 vs. NCBI nr
Match: XP_023536960.1 (uncharacterized protein LOC111798186 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.4 bits (747), Expect = 2.4e-75
Identity = 146/161 (90.68%), Postives = 151/161 (93.79%), Query Frame = 0


Query: 1   MKSEFSPTMAAPNKETPCFLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAATLAKLY 60
           MKSE SPTMAA NKETPCFLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAAT AKLY
Sbjct: 1   MKSELSPTMAALNKETPCFLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAATFAKLY 60

Query: 61  DGPRKPIFDDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYEDLIGDVPA 120
           DGP KPIFDDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYEDLIGDVPA
Sbjct: 61  DGPHKPIFDDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYEDLIGDVPA 120

Query: 121 VRDAALLEIARMSLRSLQVDPIPTKSKRE-QIEKLKTKAIG 161
           VRDAALLEIARMSLRSLQVDPIPTKSK E +++  K + +G
Sbjct: 121 VRDAALLEIARMSLRSLQVDPIPTKSKSENRLKSSKQRPMG 161

[Close]

BLAST of Carg04061 vs. ExPASy TrEMBL
Match: A0A6J1GGP0 (uncharacterized protein LOC111454063 OS=Cucurbita moschata OX=3662 GN=LOC111454063 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.7e-77
Identity = 148/161 (91.93%), Postives = 153/161 (95.03%), Query Frame = 0


Query: 1   MKSEFSPTMAAPNKETPCFLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAATLAKLY 60
           MKSE SPTMAAPNKETPCFLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAAT AKLY
Sbjct: 1   MKSELSPTMAAPNKETPCFLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAATFAKLY 60

Query: 61  DGPRKPIFDDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYEDLIGDVPA 120
           DGPRKPIFDDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYEDLIGDVPA
Sbjct: 61  DGPRKPIFDDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYEDLIGDVPA 120

Query: 121 VRDAALLEIARMSLRSLQVDPIPTKSKRE-QIEKLKTKAIG 161
           VRDAALLEIARMSLRSLQVDPIPTKSK E +++  K + +G
Sbjct: 121 VRDAALLEIARMSLRSLQVDPIPTKSKSENRLKSSKQRQLG 161

[Close]

BLAST of Carg04061 vs. ExPASy TrEMBL
Match: A0A6J1KHQ3 (uncharacterized protein LOC111495903 OS=Cucurbita maxima OX=3661 GN=LOC111495903 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.4e-76
Identity = 146/161 (90.68%), Postives = 152/161 (94.41%), Query Frame = 0


Query: 1   MKSEFSPTMAAPNKETPCFLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAATLAKLY 60
           MKSE SPTMAAPNKETPCFLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAAT AKLY
Sbjct: 1   MKSELSPTMAAPNKETPCFLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAATFAKLY 60

Query: 61  DGPRKPIFDDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYEDLIGDVPA 120
           DGPRKPIFDDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYE+LIGDVPA
Sbjct: 61  DGPRKPIFDDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYEELIGDVPA 120

Query: 121 VRDAALLEIARMSLRSLQVDPIPTKSKRE-QIEKLKTKAIG 161
           VRD ALLEIARMSLRSLQVDPIPTKSK E +++  K + +G
Sbjct: 121 VRDVALLEIARMSLRSLQVDPIPTKSKSENRLKSSKQRQLG 161

[Close]

BLAST of Carg04061 vs. ExPASy TrEMBL
Match: A0A6J1HEA2 (uncharacterized protein LOC111462692 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462692 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.2e-62
Identity = 127/153 (83.01%), Postives = 133/153 (86.93%), Query Frame = 0


Query: 1   MKSEFSPTMAAPNKETPC------FLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAA 60
           MK + SPTMAA  K+TP       FLSRKARYKFW LAAILLLAFWSMFTGSVSLKWSA 
Sbjct: 1   MKPDLSPTMAALKKDTPSETGVSFFLSRKARYKFWVLAAILLLAFWSMFTGSVSLKWSAR 60

Query: 61  TLAKLYDGPRKPIFDDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYEDL 120
           T A+ YDGPRKPIFDDLDILEVEERER VRHMWNLY+H GGGGRLPRFW EAFEAAYEDL
Sbjct: 61  TFARFYDGPRKPIFDDLDILEVEERERDVRHMWNLYSH-GGGGRLPRFWLEAFEAAYEDL 120

Query: 121 IGDVPAVRDAALLEIARMSLRSLQVDPIPTKSK 148
           IGDVPAVRDAALLEIARMSL+S+ VDPIP KSK
Sbjct: 121 IGDVPAVRDAALLEIARMSLQSVHVDPIPIKSK 152

[Close]

BLAST of Carg04061 vs. ExPASy TrEMBL
Match: A0A6J1HBY9 (uncharacterized protein LOC111462692 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111462692 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.2e-62
Identity = 127/154 (82.47%), Postives = 134/154 (87.01%), Query Frame = 0


Query: 1   MKSEFSPTMAAPNKETPC------FLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAA 60
           MK + SPTMAA  K+TP       FLSRKARYKFW LAAILLLAFWSMFTGSVSLKWSA 
Sbjct: 1   MKPDLSPTMAALKKDTPSETGVSFFLSRKARYKFWVLAAILLLAFWSMFTGSVSLKWSAR 60

Query: 61  TLAKLYDGPRKPIFDDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYEDL 120
           T A+ YDGPRKPIFDDLDILEVEERER VRHMWNLY+H GGGGRLPRFW EAFEAAYEDL
Sbjct: 61  TFARFYDGPRKPIFDDLDILEVEERERDVRHMWNLYSH-GGGGRLPRFWLEAFEAAYEDL 120

Query: 121 IGDVPAVRDAALLEIARMSLRSLQVDPIPTKSKR 149
           IGDVPAVRDAALLEIARMSL+S+ VDPIP KSK+
Sbjct: 121 IGDVPAVRDAALLEIARMSLQSVHVDPIPIKSKQ 153

[Close]

BLAST of Carg04061 vs. ExPASy TrEMBL
Match: A0A6J1K9Z2 (uncharacterized protein LOC111492438 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492438 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 9.7e-62
Identity = 125/153 (81.70%), Postives = 132/153 (86.27%), Query Frame = 0


Query: 1   MKSEFSPTMAAPNKETPC------FLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAA 60
           MK +  PTMAA  K++P       FLSRKARYKFW LAAILLLAFWSMFTGSVSLKWSA 
Sbjct: 1   MKPDLPPTMAALKKDSPSETGVSFFLSRKARYKFWVLAAILLLAFWSMFTGSVSLKWSAG 60

Query: 61  TLAKLYDGPRKPIFDDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYEDL 120
           T A+ YDGPRKPIFDDLDILEVEERER VRHMWNLY+H GGGGRLPRFW EAFEAAYEDL
Sbjct: 61  TFARFYDGPRKPIFDDLDILEVEERERDVRHMWNLYSH-GGGGRLPRFWLEAFEAAYEDL 120

Query: 121 IGDVPAVRDAALLEIARMSLRSLQVDPIPTKSK 148
           IGDVPAVRDAALLEIARMSL+S+ VDPIP KSK
Sbjct: 121 IGDVPAVRDAALLEIARMSLQSVHVDPIPIKSK 152

[Close]

BLAST of Carg04061 vs. TAIR 10
Match: AT5G65650.1 (Protein of unknown function (DUF1195) )

HSP 1 Score: 158.7 bits (400), Expect = 3.9e-39
Identity = 88/156 (56.41%), Postives = 108/156 (69.23%), Query Frame = 0


Query: 3   SEFSPTMAAPNKETP-CFLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAATLAKLYD 62
           S  + T     KET    L  K RYKFWALAAILLLAFWSM TG+V+L+WSA  +    D
Sbjct: 12  SSVAATTVTGKKETGYSALFSKGRYKFWALAAILLLAFWSMLTGTVNLRWSAGNINHFTD 71

Query: 63  GPRKPIFDDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYEDLIGDVPAV 122
               PI +DLD+LE+EERE+VV+HMW++Y + G   RLPRFW EAFEAAYE+L  DVP V
Sbjct: 72  DLVFPIHEDLDVLEMEEREKVVKHMWDVY-NNGRRIRLPRFWQEAFEAAYEELTSDVPDV 131

Query: 123 RDAALLEIARMSLRSLQVDPIPTKSK--REQIEKLK 156
            +AA+ EIARMS+RS+ +DP P  S   RE  + LK
Sbjct: 132 VEAAISEIARMSIRSIVIDPPPLHSTNVRELTKTLK 166

[Close]

BLAST of Carg04061 vs. TAIR 10
Match: AT4G36660.1 (Protein of unknown function (DUF1195) )

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-36
Identity = 78/139 (56.12%), Postives = 103/139 (74.10%), Query Frame = 0


Query: 9   MAAPNKE-TPCFLSRKARYKFWALAAILLLAFWSMFTGSVSLKWSAATLAKLYDGPRKPI 68
           MA   KE +   L  + RYKFWA AAILLLAFWSMFTG+V+L+ S   L +L +    P 
Sbjct: 21  MANSKKESSDSVLFGRGRYKFWAFAAILLLAFWSMFTGTVTLRLSTGNLNRLSEDLGIPN 80

Query: 69  FDDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYEDLIGDVPAVRDAALL 128
           +D+LD+LE+EERE+VV+HMW++YT+     +LPRFW EAF AAYE+L  DVP VR+AA+ 
Sbjct: 81  YDNLDVLEMEEREKVVKHMWDVYTN-SRRIKLPRFWQEAFVAAYEELTSDVPGVREAAIG 140

Query: 129 EIARMSLRSLQVDPIPTKS 147
           EIA+MS RS+ +DP P++S
Sbjct: 141 EIAKMSARSITLDPPPSRS 158

[Close]

BLAST of Carg04061 vs. TAIR 10
Match: AT1G19380.1 (Protein of unknown function (DUF1195) )

HSP 1 Score: 116.7 bits (291), Expect = 1.7e-26
Identity = 74/136 (54.41%), Postives = 90/136 (66.18%), Query Frame = 0


Query: 1   MKSEFSPTMAAPNKETPCFLSRK-ARYKFWALAAILLLAFWSMFTGSVSLKWSAATLAKL 60
           MK + S T+    K  P   +RK A YK W L A+LLLAF SM TGSVSLK     L   
Sbjct: 1   MKFDESKTLLPVRK--PVNGNRKTAGYKLWVLIAVLLLAFGSMLTGSVSLK--GIGLFHS 60

Query: 61  YDGPRKPIF-DDLDILEVEERERVVRHMWNLYTHGGGGGRLPRFWSEAFEAAYEDLIGDV 120
            DG     F DDLD+LE+EERE+VVR MW++Y    GG ++PRFW EAFEAAYE LI D 
Sbjct: 61  ADGVNAFSFGDDLDVLEIEEREKVVRQMWDVYGR-SGGVKVPRFWREAFEAAYEFLISDS 120

Query: 121 PAVRDAALLEIARMSL 135
            AVR+AA+ +IA++SL
Sbjct: 121 AAVRNAAVSDIAKLSL 131

The following BLAST results are available for this feature:

BLAST of Carg04061 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020520.1	9.9e-85	100.00	hypothetical protein SDJN02_17205 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6585609.1	3.5e-82	98.14	hypothetical protein SDJN03_18342, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022951121.1	3.4e-77	91.93	uncharacterized protein LOC111454063 [Cucurbita moschata]	[more]
XP_023001827.1	2.9e-76	90.68	uncharacterized protein LOC111495903 [Cucurbita maxima]	[more]
XP_023536960.1	2.4e-75	90.68	uncharacterized protein LOC111798186 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg04061 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg04061 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GGP0	1.7e-77	91.93	uncharacterized protein LOC111454063 OS=Cucurbita moschata OX=3662 GN=LOC1114540...	[more]
A0A6J1KHQ3	1.4e-76	90.68	uncharacterized protein LOC111495903 OS=Cucurbita maxima OX=3661 GN=LOC111495903...	[more]
A0A6J1HEA2	1.2e-62	83.01	uncharacterized protein LOC111462692 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HBY9	1.2e-62	82.47	uncharacterized protein LOC111462692 isoform X4 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1K9Z2	9.7e-62	81.70	uncharacterized protein LOC111492438 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Carg04061 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65650.1	3.9e-39	56.41	Protein of unknown function (DUF1195)	[more]
AT4G36660.1	1.1e-36	56.12	Protein of unknown function (DUF1195)	[more]
AT1G19380.1	1.7e-26	54.41	Protein of unknown function (DUF1195)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010608	Protein of unknown function DUF1195	PFAM	PF06708	DUF1195	coord: 18..141 e-value: 8.1E-57 score: 191.1
IPR010608	Protein of unknown function DUF1195	PANTHER	PTHR34358	OS03G0411600 PROTEIN	coord: 15..153
None	No IPR available	PANTHER	PTHR34358:SF7	PROTEIN, PUTATIVE-RELATED	coord: 15..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04061-RA	Carg04061-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane