Carg03983 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03983
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DNA ligase 1 isoform X1
Location	Carg_Chr12: 2392716 .. 2394758 (+)
RNA-Seq Expression	Carg03983
Synteny	Carg03983

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCGTTGCTTTCCTTACCCACCTCCTGGTTACGTGAGGAAGGTGGCTAGGACCGAGGCGGCCTTGATCGAACCGATTAAGGTTTGTTTGAGCTATTTGGTTGGCTTTCAATAATGTGTGCTGGATTCAATTGTGTTCTGGTTCCAATTGATTGCGAGATCTACTTGGAATTGTAACTTTTTGGATGGGGGTAATTTTTAATCAGTAACGATTTTTTTTCCCTAGTTTTTACGGCGATGGGGGAGGAATCGATATGGGTTTTCTTGTTTAGAGTGAAGAGAGTTACAAGTTTTGTACAGGTGTAGATTATAGTTTCAGTTTTGTTCGTCTGTGTTTTTCAAGTAATTGACGAGTGATATCTCTTCAAGGAACAAGAGATCTTTGAGAGTTTAAGTGGATGGATAGTGAGTTGGGAGTTTGTAAGTTGCATGTCTTGCAAAGCGTTGTTGGATCTTGTATGTATGGTTCCGTTTTCACTATCAGAACACCAAGTGTACATTTGTAGCGAATAAATGTTTAATAGATCATTTATTATTCATGGGAACGTCATGATTTTTTAAATCTTTTTTCAAATCATTATCTGGTTTTTGAAGTTGATGATTTCAACAAATTCTTAGTGAAAGAGAGAGAGTTTCTTCCTGTAGTCTGATTAATTTGAACGCCTTTGTATGAACTTTACTCGGGACTTGTTTTCCTCCTTATAAACTTAGGCGTATGGTTACATGATGTGAATATTCGAGTTTACTAGTTAGAATGTATGATTATCCGAGTCCAAATGAACATGCTTCTGTACAATAGGAATGGCTACCATTTTGAAGGGTTGCCCTTCATTTGTTAGTTAAGACATGGTTGATTTGTTTGGTGCTTGCGTGGTCTGCATTTTTTTAAATGGTTATTCTGGTGCGTTATAGCTCCTATCTGAAAGACGAGAAAAAGGGACTGAAAGAAAGAAAGAGAAAAGTAAGCACAAGAAAGAGAAGAGTAAGGACAAGAAACACAAAAGCAAAGAGCATAGAGATAAATCTTCTCGCAGCCGCCGTGACTCGAATGGTCAGAAACAGAAGGAAGTCAAGGACCTTCTGAAGGGAACAAAAGTTGAAGCAGAACAATTGGAAAAGAGTGGTCTCACTGAAGAGCATGGGCAACCAGTATGGCCTCAAAGTCCTGGCTACTTGTCTGATGGAACTCAGTCCAATCACAAGAGAAAAAGGGGTGCATCGATACAGCCTAATGAAGACTGTAAGCCTGGTGGGTTCTCTTTATATGCTCTTTTGTGAAATTTGTTCACTTGGGCATTTGAGTGATCGCTAATATGTAAATAATTGATCACAAACAGGAAAAGTCATCCGAATCAAACTGGCTTCTTCACTTAGCCAACAAGAGGATTCCTCAGCTGGCAGTGAACAGACGTGTTCTACAACTGGTCGTCGTAATTCTCTTCATCAAACGAGAGATGGGAACAGCAGCCGTGTGCCCATTGTGCAAAAAACTTCCCTCACTTCTCTTGATCAAAAGAGAGATGAGAACAGCGGTCGTGGGCTCATTGTGCAAAAAACTTCCCTCACTTCTCTTGATCAAAAGAGAGATGAGAGCTGCCGCCGTGTGCCCCCAGTGCAAAAAACTTCCCTCACTTCTCTTGATCAAAAGAGAGATGAGAACAGCGGTCGTGGGCTCATTGTGCAAAAAACTTCCCTCACAATGCCCGACACACCAGTCGCTGTCAAGGATCCGATTTCGAAACCTAATATCAAAGACCTTCCTTTACATGCTGTTGACATTGGTAGTACTCATCGCAAGAGAAAGCCTTCTGACTCTGCTTATGAGGACTTATTTGACAAATGGGTACCGCCAACGCTTCAGTTGGGGCAGCAAACCGACGATGAAGAATGGCTCTTCGGAACGAAAAAGCAGGATGAAAGAACAAAGACCAACCAAGCTTCCAGTCATGCTCCCATCTGTAGAAGTTCCAGTCTGTGGCCGAGAGGACAGTTTGTACCTGAAGCTGACGTTTATATGTTGCCTTACACGATTCCATTTTGA

mRNA sequence

ATGTCTCGTTGCTTTCCTTACCCACCTCCTGGTTACGTGAGGAAGGTGGCTAGGACCGAGGCGGCCTTGATCGAACCGATTAAGCTCCTATCTGAAAGACGAGAAAAAGGGACTGAAAGAAAGAAAGAGAAAAGTAAGCACAAGAAAGAGAAGAGTAAGGACAAGAAACACAAAAGCAAAGAGCATAGAGATAAATCTTCTCGCAGCCGCCGTGACTCGAATGGTCAGAAACAGAAGGAAGTCAAGGACCTTCTGAAGGGAACAAAAGTTGAAGCAGAACAATTGGAAAAGAGTGGTCTCACTGAAGAGCATGGGCAACCAGTATGGCCTCAAAGTCCTGGCTACTTGTCTGATGGAACTCAGTCCAATCACAAGAGAAAAAGGGGTGCATCGATACAGCCTAATGAAGACTGTAAGCCTGGAAAAGTCATCCGAATCAAACTGGCTTCTTCACTTAGCCAACAAGAGGATTCCTCAGCTGGCAGTGAACAGACGTGTTCTACAACTGGTCGTCGTAATTCTCTTCATCAAACGAGAGATGGGAACAGCAGCCGTGTGCCCATTGTGCAAAAAACTTCCCTCACTTCTCTTGATCAAAAGAGAGATGAGAACAGCGGTCGTGGGCTCATTGTGCAAAAAACTTCCCTCACTTCTCTTGATCAAAAGAGAGATGAGAGCTGCCGCCGTGTGCCCCCAGTGCAAAAAACTTCCCTCACTTCTCTTGATCAAAAGAGAGATGAGAACAGCGGTCGTGGGCTCATTGTGCAAAAAACTTCCCTCACAATGCCCGACACACCAGTCGCTGTCAAGGATCCGATTTCGAAACCTAATATCAAAGACCTTCCTTTACATGCTGTTGACATTGGTAGTACTCATCGCAAGAGAAAGCCTTCTGACTCTGCTTATGAGGACTTATTTGACAAATGGGTACCGCCAACGCTTCAGTTGGGGCAGCAAACCGACGATGAAGAATGGCTCTTCGGAACGAAAAAGCAGGATGAAAGAACAAAGACCAACCAAGCTTCCAGTCATGCTCCCATCTGTAGAAGTTCCAGTCTGTGGCCGAGAGGACAGTTTGTACCTGAAGCTGACGTTTATATGTTGCCTTACACGATTCCATTTTGA

Coding sequence (CDS)

ATGTCTCGTTGCTTTCCTTACCCACCTCCTGGTTACGTGAGGAAGGTGGCTAGGACCGAGGCGGCCTTGATCGAACCGATTAAGCTCCTATCTGAAAGACGAGAAAAAGGGACTGAAAGAAAGAAAGAGAAAAGTAAGCACAAGAAAGAGAAGAGTAAGGACAAGAAACACAAAAGCAAAGAGCATAGAGATAAATCTTCTCGCAGCCGCCGTGACTCGAATGGTCAGAAACAGAAGGAAGTCAAGGACCTTCTGAAGGGAACAAAAGTTGAAGCAGAACAATTGGAAAAGAGTGGTCTCACTGAAGAGCATGGGCAACCAGTATGGCCTCAAAGTCCTGGCTACTTGTCTGATGGAACTCAGTCCAATCACAAGAGAAAAAGGGGTGCATCGATACAGCCTAATGAAGACTGTAAGCCTGGAAAAGTCATCCGAATCAAACTGGCTTCTTCACTTAGCCAACAAGAGGATTCCTCAGCTGGCAGTGAACAGACGTGTTCTACAACTGGTCGTCGTAATTCTCTTCATCAAACGAGAGATGGGAACAGCAGCCGTGTGCCCATTGTGCAAAAAACTTCCCTCACTTCTCTTGATCAAAAGAGAGATGAGAACAGCGGTCGTGGGCTCATTGTGCAAAAAACTTCCCTCACTTCTCTTGATCAAAAGAGAGATGAGAGCTGCCGCCGTGTGCCCCCAGTGCAAAAAACTTCCCTCACTTCTCTTGATCAAAAGAGAGATGAGAACAGCGGTCGTGGGCTCATTGTGCAAAAAACTTCCCTCACAATGCCCGACACACCAGTCGCTGTCAAGGATCCGATTTCGAAACCTAATATCAAAGACCTTCCTTTACATGCTGTTGACATTGGTAGTACTCATCGCAAGAGAAAGCCTTCTGACTCTGCTTATGAGGACTTATTTGACAAATGGGTACCGCCAACGCTTCAGTTGGGGCAGCAAACCGACGATGAAGAATGGCTCTTCGGAACGAAAAAGCAGGATGAAAGAACAAAGACCAACCAAGCTTCCAGTCATGCTCCCATCTGTAGAAGTTCCAGTCTGTGGCCGAGAGGACAGTTTGTACCTGAAGCTGACGTTTATATGTTGCCTTACACGATTCCATTTTGA

Protein sequence

MSRCFPYPPPGYVRKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSKEHRDKSSRSRRDSNGQKQKEVKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDGTQSNHKRKRGASIQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSLHQTRDGNSSRVPIVQKTSLTSLDQKRDENSGRGLIVQKTSLTSLDQKRDESCRRVPPVQKTSLTSLDQKRDENSGRGLIVQKTSLTMPDTPVAVKDPISKPNIKDLPLHAVDIGSTHRKRKPSDSAYEDLFDKWVPPTLQLGQQTDDEEWLFGTKKQDERTKTNQASSHAPICRSSSLWPRGQFVPEADVYMLPYTIPF

Homology

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BLAST of Carg03983 vs. NCBI nr
Match: KAG7020444.1 (hypothetical protein SDJN02_17128, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 720.3 bits (1858), Expect = 8.5e-204
Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK 60
           MSRCFPYPPPGYVRKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK
Sbjct: 1   MSRCFPYPPPGYVRKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK 60

Query: 61  EHRDKSSRSRRDSNGQKQKEVKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDGT 120
           EHRDKSSRSRRDSNGQKQKEVKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDGT
Sbjct: 61  EHRDKSSRSRRDSNGQKQKEVKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDGT 120

Query: 121 QSNHKRKRGASIQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSLHQTRD 180
           QSNHKRKRGASIQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSLHQTRD
Sbjct: 121 QSNHKRKRGASIQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSLHQTRD 180

Query: 181 GNSSRVPIVQKTSLTSLDQKRDENSGRGLIVQKTSLTSLDQKRDESCRRVPPVQKTSLTS 240
           GNSSRVPIVQKTSLTSLDQKRDENSGRGLIVQKTSLTSLDQKRDESCRRVPPVQKTSLTS
Sbjct: 181 GNSSRVPIVQKTSLTSLDQKRDENSGRGLIVQKTSLTSLDQKRDESCRRVPPVQKTSLTS 240

Query: 241 LDQKRDENSGRGLIVQKTSLTMPDTPVAVKDPISKPNIKDLPLHAVDIGSTHRKRKPSDS 300
           LDQKRDENSGRGLIVQKTSLTMPDTPVAVKDPISKPNIKDLPLHAVDIGSTHRKRKPSDS
Sbjct: 241 LDQKRDENSGRGLIVQKTSLTMPDTPVAVKDPISKPNIKDLPLHAVDIGSTHRKRKPSDS 300

Query: 301 AYEDLFDKWVPPTLQLGQQTDDEEWLFGTKKQDERTKTNQASSHAPICRSSSLWPRGQFV 360
           AYEDLFDKWVPPTLQLGQQTDDEEWLFGTKKQDERTKTNQASSHAPICRSSSLWPRGQFV
Sbjct: 301 AYEDLFDKWVPPTLQLGQQTDDEEWLFGTKKQDERTKTNQASSHAPICRSSSLWPRGQFV 360

Query: 361 PEADVYMLPYTIPF 375
           PEADVYMLPYTIPF
Sbjct: 361 PEADVYMLPYTIPF 374

[Close]

BLAST of Carg03983 vs. NCBI nr
Match: KAG6585530.1 (hypothetical protein SDJN03_18263, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 716.1 bits (1847), Expect = 1.6e-202
Identity = 372/374 (99.47%), Postives = 373/374 (99.73%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK 60
           MSRCFPYPPPGYVRKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK
Sbjct: 1   MSRCFPYPPPGYVRKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK 60

Query: 61  EHRDKSSRSRRDSNGQKQKEVKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDGT 120
           EHRDKSSRSRRDSNGQKQK+VKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDGT
Sbjct: 61  EHRDKSSRSRRDSNGQKQKKVKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDGT 120

Query: 121 QSNHKRKRGASIQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSLHQTRD 180
           QSNHKRKRGASIQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSLHQTRD
Sbjct: 121 QSNHKRKRGASIQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSLHQTRD 180

Query: 181 GNSSRVPIVQKTSLTSLDQKRDENSGRGLIVQKTSLTSLDQKRDESCRRVPPVQKTSLTS 240
           GNSSRVPIVQKTSLTSLDQKRDENSGRGLIVQKTSLTSLDQKRDESCR VPPVQKTSLTS
Sbjct: 181 GNSSRVPIVQKTSLTSLDQKRDENSGRGLIVQKTSLTSLDQKRDESCRGVPPVQKTSLTS 240

Query: 241 LDQKRDENSGRGLIVQKTSLTMPDTPVAVKDPISKPNIKDLPLHAVDIGSTHRKRKPSDS 300
           LDQKRDENSGRGLIVQKTSLTMPDTPVAVKDPISKPNIKDLPLHAVDIGSTHRKRKPSDS
Sbjct: 241 LDQKRDENSGRGLIVQKTSLTMPDTPVAVKDPISKPNIKDLPLHAVDIGSTHRKRKPSDS 300

Query: 301 AYEDLFDKWVPPTLQLGQQTDDEEWLFGTKKQDERTKTNQASSHAPICRSSSLWPRGQFV 360
           AYEDLFDKWVPPTLQLGQQTDDEEWLFGTKKQDERTKTNQASSHAPICRSSSLWPRGQFV
Sbjct: 301 AYEDLFDKWVPPTLQLGQQTDDEEWLFGTKKQDERTKTNQASSHAPICRSSSLWPRGQFV 360

Query: 361 PEADVYMLPYTIPF 375
           PEADVYMLPYTIPF
Sbjct: 361 PEADVYMLPYTIPF 374

[Close]

BLAST of Carg03983 vs. NCBI nr
Match: XP_022951331.1 (uncharacterized protein LOC111454195 isoform X1 [Cucurbita moschata])

HSP 1 Score: 632.1 bits (1629), Expect = 3.0e-177
Identity = 343/376 (91.22%), Postives = 344/376 (91.49%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK 60
           MSRCFPYPPPGY RKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK
Sbjct: 1   MSRCFPYPPPGYARKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK 60

Query: 61  EHRDKSSR-SRRDSNGQKQKEVKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDG 120
           EHRDKSSR SRR SN QKQKEVKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDG
Sbjct: 61  EHRDKSSRSSRRYSNDQKQKEVKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDG 120

Query: 121 TQSNHKRKRGASIQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRR-NSLHQT 180
           TQSNHKRKRGASIQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRR N LHQT
Sbjct: 121 TQSNHKRKRGASIQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRCNPLHQT 180

Query: 181 RDGNSSRVPIVQKTSLTSLDQKRDENSGRGLIVQKTSLTSLDQKRDESCRRVPPVQKTSL 240
           RD NSSRVP                      IVQKTSLTSLDQKRDESCRRVPPVQKTSL
Sbjct: 181 RDENSSRVP----------------------IVQKTSLTSLDQKRDESCRRVPPVQKTSL 240

Query: 241 TSLDQKRDENSGRGLIVQKTSLTMPDTPVAVKDPISKPNIKDLPLHAVDIGSTHRKRKPS 300
           TSLDQKRDENSGRGLIVQKTSLTMPDTPVAVKDPISKPNIKDLPLHAVDIG THRKRKPS
Sbjct: 241 TSLDQKRDENSGRGLIVQKTSLTMPDTPVAVKDPISKPNIKDLPLHAVDIG-THRKRKPS 300

Query: 301 DSAYEDLFDKWVPPTLQLGQQTDDEEWLFGTKKQDERTKTNQASSHAPICRSSSLWPRGQ 360
           DSAYEDLFDKWVPPTLQLGQQTD+EEWLFG KKQDERTKTNQA SHAPICRSSSLWPRGQ
Sbjct: 301 DSAYEDLFDKWVPPTLQLGQQTDNEEWLFGPKKQDERTKTNQAFSHAPICRSSSLWPRGQ 353

Query: 361 FVPEADVYMLPYTIPF 375
           FVPEADVYMLPYTIPF
Sbjct: 361 FVPEADVYMLPYTIPF 353

[Close]

BLAST of Carg03983 vs. NCBI nr
Match: XP_023538217.1 (uncharacterized protein LOC111799057 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 629.4 bits (1622), Expect = 2.0e-176
Identity = 339/375 (90.40%), Postives = 342/375 (91.20%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK 60
           MSRCFPYPPPGY RKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK
Sbjct: 1   MSRCFPYPPPGYARKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK 60

Query: 61  EHRDKSSR-SRRDSNGQKQKEVKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDG 120
           EHRDKSSR SRRDSN QKQKEVKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDG
Sbjct: 61  EHRDKSSRSSRRDSNDQKQKEVKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDG 120

Query: 121 TQSNHKRKRGASIQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSLHQTR 180
           TQSNHKRKRGAS+QPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSLHQTR
Sbjct: 121 TQSNHKRKRGASLQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSLHQTR 180

Query: 181 DGNSSRVPIVQKTSLTSLDQKRDENSGRGLIVQKTSLTSLDQKRDESCRRVPPVQKTSLT 240
           D NSSRVPIVQKTSLTSLDQKRDENS                      RRVP VQKTSLT
Sbjct: 181 DKNSSRVPIVQKTSLTSLDQKRDENS----------------------RRVPIVQKTSLT 240

Query: 241 SLDQKRDENSGRGLIVQKTSLTMPDTPVAVKDPISKPNIKDLPLHAVDIGSTHRKRKPSD 300
           SLDQKRDENS    IVQKTSLT+ DTPVAVKDPISKPNIKDLPLHAVDIGSTHRKRKPS+
Sbjct: 241 SLDQKRDENSRSRPIVQKTSLTIADTPVAVKDPISKPNIKDLPLHAVDIGSTHRKRKPSE 300

Query: 301 SAYEDLFDKWVPPTLQLGQQTDDEEWLFGTKKQDERTKTNQASSHAPICRSSSLWPRGQF 360
           SAYEDLFDKWVPPTLQLGQQTDDEEWLFGTKKQDERTKTNQA SHAPICRSSSLWPRGQF
Sbjct: 301 SAYEDLFDKWVPPTLQLGQQTDDEEWLFGTKKQDERTKTNQAFSHAPICRSSSLWPRGQF 353

Query: 361 VPEADVYMLPYTIPF 375
           VPEADVYMLPYTIPF
Sbjct: 361 VPEADVYMLPYTIPF 353

[Close]

BLAST of Carg03983 vs. NCBI nr
Match: XP_023002403.1 (uncharacterized protein LOC111496256 [Cucurbita maxima])

HSP 1 Score: 607.4 bits (1565), Expect = 8.0e-170
Identity = 327/374 (87.43%), Postives = 334/374 (89.30%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK 60
           MSRCFPYPPPGY RKVARTEAALIE IKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK
Sbjct: 1   MSRCFPYPPPGYARKVARTEAALIESIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK 60

Query: 61  EHRDKSSRSRRDSNGQKQKEVKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDGT 120
           EHRDKSSRSRRDS  QKQKEVKDLL+GTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDGT
Sbjct: 61  EHRDKSSRSRRDSTDQKQKEVKDLLQGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDGT 120

Query: 121 QSNHKRKRGASIQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSLHQTRD 180
           QSNHKRKRGAS+QPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSLHQTRD
Sbjct: 121 QSNHKRKRGASLQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSLHQTRD 180

Query: 181 GNSSRVPIVQKTSLTSLDQKRDENSGRGLIVQKTSLTSLDQKRDESCRRVPPVQKTSLTS 240
            NSSRVPIVQKTS TSLDQKR ENS                       RVP VQKTSLTS
Sbjct: 181 ENSSRVPIVQKTSFTSLDQKRVENSS----------------------RVPIVQKTSLTS 240

Query: 241 LDQKRDENSGRGLIVQKTSLTMPDTPVAVKDPISKPNIKDLPLHAVDIGSTHRKRKPSDS 300
           LDQKRDENS    IVQKTSLT+ DT VAV+DPIS+PNIKDLPLHAVDIGSTHRKRKPS+S
Sbjct: 241 LDQKRDENSRSRPIVQKTSLTIADTAVAVQDPISEPNIKDLPLHAVDIGSTHRKRKPSES 300

Query: 301 AYEDLFDKWVPPTLQLGQQTDDEEWLFGTKKQDERTKTNQASSHAPICRSSSLWPRGQFV 360
           AYEDLFDKWVPPTLQLGQQT DEEWLFGTKKQDERTKTNQA SHAPICR SSLWPRGQFV
Sbjct: 301 AYEDLFDKWVPPTLQLGQQTVDEEWLFGTKKQDERTKTNQAFSHAPICRRSSLWPRGQFV 352

Query: 361 PEADVYMLPYTIPF 375
           PEADVY+LPYTIPF
Sbjct: 361 PEADVYLLPYTIPF 352

[Close]

BLAST of Carg03983 vs. ExPASy TrEMBL
Match: A0A6J1GHA3 (uncharacterized protein LOC111454195 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454195 PE=4 SV=1)

HSP 1 Score: 632.1 bits (1629), Expect = 1.5e-177
Identity = 343/376 (91.22%), Postives = 344/376 (91.49%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK 60
           MSRCFPYPPPGY RKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK
Sbjct: 1   MSRCFPYPPPGYARKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK 60

Query: 61  EHRDKSSR-SRRDSNGQKQKEVKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDG 120
           EHRDKSSR SRR SN QKQKEVKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDG
Sbjct: 61  EHRDKSSRSSRRYSNDQKQKEVKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDG 120

Query: 121 TQSNHKRKRGASIQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRR-NSLHQT 180
           TQSNHKRKRGASIQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRR N LHQT
Sbjct: 121 TQSNHKRKRGASIQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRCNPLHQT 180

Query: 181 RDGNSSRVPIVQKTSLTSLDQKRDENSGRGLIVQKTSLTSLDQKRDESCRRVPPVQKTSL 240
           RD NSSRVP                      IVQKTSLTSLDQKRDESCRRVPPVQKTSL
Sbjct: 181 RDENSSRVP----------------------IVQKTSLTSLDQKRDESCRRVPPVQKTSL 240

Query: 241 TSLDQKRDENSGRGLIVQKTSLTMPDTPVAVKDPISKPNIKDLPLHAVDIGSTHRKRKPS 300
           TSLDQKRDENSGRGLIVQKTSLTMPDTPVAVKDPISKPNIKDLPLHAVDIG THRKRKPS
Sbjct: 241 TSLDQKRDENSGRGLIVQKTSLTMPDTPVAVKDPISKPNIKDLPLHAVDIG-THRKRKPS 300

Query: 301 DSAYEDLFDKWVPPTLQLGQQTDDEEWLFGTKKQDERTKTNQASSHAPICRSSSLWPRGQ 360
           DSAYEDLFDKWVPPTLQLGQQTD+EEWLFG KKQDERTKTNQA SHAPICRSSSLWPRGQ
Sbjct: 301 DSAYEDLFDKWVPPTLQLGQQTDNEEWLFGPKKQDERTKTNQAFSHAPICRSSSLWPRGQ 353

Query: 361 FVPEADVYMLPYTIPF 375
           FVPEADVYMLPYTIPF
Sbjct: 361 FVPEADVYMLPYTIPF 353

[Close]

BLAST of Carg03983 vs. ExPASy TrEMBL
Match: A0A6J1KTG3 (uncharacterized protein LOC111496256 OS=Cucurbita maxima OX=3661 GN=LOC111496256 PE=4 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 3.9e-170
Identity = 327/374 (87.43%), Postives = 334/374 (89.30%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK 60
           MSRCFPYPPPGY RKVARTEAALIE IKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK
Sbjct: 1   MSRCFPYPPPGYARKVARTEAALIESIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK 60

Query: 61  EHRDKSSRSRRDSNGQKQKEVKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDGT 120
           EHRDKSSRSRRDS  QKQKEVKDLL+GTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDGT
Sbjct: 61  EHRDKSSRSRRDSTDQKQKEVKDLLQGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDGT 120

Query: 121 QSNHKRKRGASIQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSLHQTRD 180
           QSNHKRKRGAS+QPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSLHQTRD
Sbjct: 121 QSNHKRKRGASLQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSLHQTRD 180

Query: 181 GNSSRVPIVQKTSLTSLDQKRDENSGRGLIVQKTSLTSLDQKRDESCRRVPPVQKTSLTS 240
            NSSRVPIVQKTS TSLDQKR ENS                       RVP VQKTSLTS
Sbjct: 181 ENSSRVPIVQKTSFTSLDQKRVENSS----------------------RVPIVQKTSLTS 240

Query: 241 LDQKRDENSGRGLIVQKTSLTMPDTPVAVKDPISKPNIKDLPLHAVDIGSTHRKRKPSDS 300
           LDQKRDENS    IVQKTSLT+ DT VAV+DPIS+PNIKDLPLHAVDIGSTHRKRKPS+S
Sbjct: 241 LDQKRDENSRSRPIVQKTSLTIADTAVAVQDPISEPNIKDLPLHAVDIGSTHRKRKPSES 300

Query: 301 AYEDLFDKWVPPTLQLGQQTDDEEWLFGTKKQDERTKTNQASSHAPICRSSSLWPRGQFV 360
           AYEDLFDKWVPPTLQLGQQT DEEWLFGTKKQDERTKTNQA SHAPICR SSLWPRGQFV
Sbjct: 301 AYEDLFDKWVPPTLQLGQQTVDEEWLFGTKKQDERTKTNQAFSHAPICRRSSLWPRGQFV 352

Query: 361 PEADVYMLPYTIPF 375
           PEADVY+LPYTIPF
Sbjct: 361 PEADVYLLPYTIPF 352

[Close]

BLAST of Carg03983 vs. ExPASy TrEMBL
Match: A0A6J1GHB8 (uncharacterized protein LOC111454195 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454195 PE=4 SV=1)

HSP 1 Score: 580.9 bits (1496), Expect = 3.9e-162
Identity = 321/376 (85.37%), Postives = 322/376 (85.64%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK 60
           MSRCFPYPPPGY RKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK
Sbjct: 1   MSRCFPYPPPGYARKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK 60

Query: 61  EHRDKSSR-SRRDSNGQKQKEVKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDG 120
           EHRDKSSR SRR SN QKQKEVKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDG
Sbjct: 61  EHRDKSSRSSRRYSNDQKQKEVKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDG 120

Query: 121 TQSNHKRKRGASIQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRR-NSLHQT 180
           TQSNHKRKRGASIQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRR N LHQT
Sbjct: 121 TQSNHKRKRGASIQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRCNPLHQT 180

Query: 181 RDGNSSRVPIVQKTSLTSLDQKRDENSGRGLIVQKTSLTSLDQKRDESCRRVPPVQKTSL 240
           RD NSSRVPI                                            VQKTSL
Sbjct: 181 RDENSSRVPI--------------------------------------------VQKTSL 240

Query: 241 TSLDQKRDENSGRGLIVQKTSLTMPDTPVAVKDPISKPNIKDLPLHAVDIGSTHRKRKPS 300
           TSLDQKRDENSGRGLIVQKTSLTMPDTPVAVKDPISKPNIKDLPLHAVDIG THRKRKPS
Sbjct: 241 TSLDQKRDENSGRGLIVQKTSLTMPDTPVAVKDPISKPNIKDLPLHAVDIG-THRKRKPS 300

Query: 301 DSAYEDLFDKWVPPTLQLGQQTDDEEWLFGTKKQDERTKTNQASSHAPICRSSSLWPRGQ 360
           DSAYEDLFDKWVPPTLQLGQQTD+EEWLFG KKQDERTKTNQA SHAPICRSSSLWPRGQ
Sbjct: 301 DSAYEDLFDKWVPPTLQLGQQTDNEEWLFGPKKQDERTKTNQAFSHAPICRSSSLWPRGQ 331

Query: 361 FVPEADVYMLPYTIPF 375
           FVPEADVYMLPYTIPF
Sbjct: 361 FVPEADVYMLPYTIPF 331

[Close]

BLAST of Carg03983 vs. ExPASy TrEMBL
Match: A0A6J1HBK0 (DNA ligase 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462522 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 2.9e-93
Identity = 220/387 (56.85%), Postives = 248/387 (64.08%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK 60
           MSRCFPYPPPGYVRKVARTEAALIE IKL SERR+  T+ KKEKSKHKKEKSKD+KHKSK
Sbjct: 1   MSRCFPYPPPGYVRKVARTEAALIESIKLQSERRQHKTDSKKEKSKHKKEKSKDRKHKSK 60

Query: 61  EHRDKSSRSRRDSNGQKQ----KEVKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSPGYL 120
           E +++  +S R  N QKQ    KE KD L+GTKVEAEQLEKSGLTEEHGQPVWP SPGYL
Sbjct: 61  ERKERKEKSSRSLNDQKQKACVKEAKDRLEGTKVEAEQLEKSGLTEEHGQPVWPHSPGYL 120

Query: 121 SDGTQSNHKRKRGASIQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSLH 180
           SDGTQ NHKRKR  S+QP+E CKPGKVIRIKLASSLSQQE+SSAGSEQTCS +GR     
Sbjct: 121 SDGTQINHKRKRD-SLQPDEGCKPGKVIRIKLASSLSQQENSSAGSEQTCSVSGR----- 180

Query: 181 QTRDGNSSRVPIVQKTSLTSLDQKRDENSGRGLIVQKTSLTSLDQKRDESCRRVPPVQKT 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 SLTSLDQKRDENSGRGLIVQKTSLTMPDTPVAVKD-PISKPNIKDLPLHAV-------DI 300
                D  RDENS   ++ + T     +T +AVKD   SKP IKD P HAV       ++
Sbjct: 241 -----DCSRDENS--SVVRRSTCFANSETALAVKDCTSSKPKIKDPPPHAVKEISSLGNV 300

Query: 301 GSTHRKRKPSDSAYEDLFDKWVPPTLQLGQQTDDEEWLFGTKKQDER-TKTNQASSHAPI 360
            S  R R P +SAYE LF+KWVPP LQL QQ DDEEWLF T+KQD R +KTN+A S  P 
Sbjct: 301 MSLPRTRSPVESAYEALFEKWVPPPLQLEQQMDDEEWLFPTEKQDGRSSKTNEAFSSIPS 314

Query: 361 CRSSSLWPRGQFVPEADVYMLPYTIPF 375
           CRSSSLWPRGQ++ +ADVY LPYTIP+
Sbjct: 361 CRSSSLWPRGQYLADADVYSLPYTIPY 314

[Close]

BLAST of Carg03983 vs. ExPASy TrEMBL
Match: A0A6J1KC15 (uncharacterized protein LOC111492505 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492505 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 1.1e-92
Identity = 229/390 (58.72%), Postives = 259/390 (66.41%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKS- 60
           MSRCFPYPPPGYVRKVARTEAALIE IKL SERR+  T+ KKEKSKHKKEKSKD+KHKS 
Sbjct: 1   MSRCFPYPPPGYVRKVARTEAALIESIKLQSERRQHKTDSKKEKSKHKKEKSKDRKHKSN 60

Query: 61  --KEHRDKSSRSRRDSNGQKQ----KEVKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSP 120
             KE ++KSSRS RD N QK     KE KD L+GTKVEAEQLEKSGLTEEHGQPVWP SP
Sbjct: 61  ERKESKEKSSRS-RDLNDQKHKVCVKEAKDRLEGTKVEAEQLEKSGLTEEHGQPVWPHSP 120

Query: 121 GYLSDGTQSNHKRKRGASIQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRN 180
           GYLSDGTQ NHKRKR  S+QP+E CKPGKVIRIKLASSLSQQE+SSAG E TCS +GR  
Sbjct: 121 GYLSDGTQINHKRKRDDSLQPDEGCKPGKVIRIKLASSLSQQENSSAGCELTCSVSGRD- 180

Query: 181 SLHQTRDGNSSRVPIVQKTSLTSLDQKRDENSGRGLIVQKTSLTSLDQKRDESCRRVPPV 240
                                 S DQK DENS    +V++++  +      E+ R V   
Sbjct: 181 ---------------------ISRDQKSDENSS---VVRRSTCFA----NSETARAV--- 240

Query: 241 QKTSLTSLDQKRDENSGRGLIVQKTSLTMPDTPVAVKD-PISKPNIKDLPLHAV------ 300
            K   +S  + +D                   P AVKD   SKP IKD   HAV      
Sbjct: 241 -KDCTSSKPKIKD-----------------PPPHAVKDRTSSKPKIKDPSPHAVKEISSL 300

Query: 301 -DIGSTHRKRKPSDSAYEDLFDKWVPPTLQLGQQTDDEEWLFGTKKQDER-TKTNQASSH 360
            ++ S  R R P +SAYE LF+KWVPP LQL QQ DDEEWLF T+KQD R TKTN+A S 
Sbjct: 301 GNVMSLPRTRSPVESAYEALFEKWVPPPLQLEQQMDDEEWLFPTEKQDGRSTKTNEAFSS 339

Query: 361 APICRSSSLWPRGQFVPEADVYMLPYTIPF 375
            P CR+SSLWPRGQ++  ADVY LPYTIP+
Sbjct: 361 IPSCRNSSLWPRGQYLAVADVYSLPYTIPY 339

[Close]

BLAST of Carg03983 vs. TAIR 10
Match: AT1G20100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75860.1); Has 471 Blast hits to 438 proteins in 92 species: Archae - 0; Bacteria - 14; Metazoa - 217; Fungi - 43; Plants - 91; Viruses - 1; Other Eukaryotes - 105 (source: NCBI BLink). )

HSP 1 Score: 67.4 bits (163), Expect = 2.8e-11
Identity = 105/388 (27.06%), Postives = 155/388 (39.95%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK 60
           MSR F  PPP Y R  A  +  L+E  K+         + KK   K KKEK K+KK K  
Sbjct: 1   MSRYFTSPPPVYARNWANGQ-NLVEWTKI----ERPIVDSKKLHRKEKKEKKKEKKLK-- 60

Query: 61  EHRDKSSRSRRDSNGQKQKEVKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDGT 120
             ++K S  ++ S            K    E+EQLEKS LTEE  QP      GYLSDG+
Sbjct: 61  --KEKKSLEQKYST----------TKTVSYESEQLEKSCLTEEFEQP----QVGYLSDGS 120

Query: 121 QSNHKRKRGAS---IQPNEDCKP--GKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSL 180
           Q++ KR+R  S   ++      P  GK +RI++     ++ ++    +  CST+G +   
Sbjct: 121 QNSKKRRRETSPAVVESQIKATPVAGKPLRIRIVFKKPKEAEAVPQEDPVCSTSGTQ--- 180

Query: 181 HQTRDGNSSRVPIVQKTSLTSLDQKRDENSGRGLIVQKTSLTSLDQKRDESCRRVPPVQK 240
                   S +P                           SL S+       C     V  
Sbjct: 181 ------RPSELP------------------------SSVSLPSI-------CDHDVAVPS 240

Query: 241 TSLTSLDQKRDENSGRGLIVQKTSLTMPDTPVAVKDPISKPNIKDLPLHAVDIGSTHRKR 300
           TSL          SG+  I+ ++                                  +K 
Sbjct: 241 TSL---------ESGKVAIISES-------------------------------KKRKKH 285

Query: 301 KPS-DSAYEDLFDKWVPPTLQLGQ-QTDDEEWLFGTKKQD--ERTKTNQASSHAPI---- 360
           KPS +S Y  LFD+ VPP + L +  +  ++WLFGT +++     K++  +    I    
Sbjct: 301 KPSKESRYNSLFDELVPPCISLEEDDSSSDDWLFGTSRKENVSSAKSSYKTDEDTIMSLQ 285

Query: 361 -CRSSSLWPRGQFVPEADVYMLPYTIPF 375
             R  S  PR   + E  ++ LPYT+PF
Sbjct: 361 TSRDCSSLPRAMLLSEVGIFSLPYTVPF 285

[Close]

BLAST of Carg03983 vs. TAIR 10
Match: AT2G17787.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35940.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 60.5 bits (145), Expect = 3.4e-09
Identity = 107/390 (27.44%), Postives = 163/390 (41.79%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVARTEAALIEPIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK 60
           MSRC+P+PPPGYV K      +LIE I        KG + + +K +  K   KD+K +  
Sbjct: 1   MSRCYPFPPPGYVWK-----ESLIESI--------KGAKEEVKKDRKHKRNEKDRKDRDN 60

Query: 61  EHRDKSSRSRRDSNGQKQKEVKDLLKGTKV--EAEQLEKSGLTEEHGQPVWPQSPGYLSD 120
           E    + RSR+  + +++K+   +  G  V  E E LEKS  T E       Q+     D
Sbjct: 61  E----AGRSRKHRHKRRRKDEGAIASGKLVSSEVELLEKSCQTVELELQTSSQNS---CD 120

Query: 121 GTQSNHKRKRGASIQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSLHQT 180
            T  +++R +    QP ++      IR +L      QED   G   T     +R S    
Sbjct: 121 STLHSNERPKQIQSQPLDETS----IRTRLPD--KGQEDPEDGVMMTSKDQKQRFSREML 180

Query: 181 RDGNSSRVPIVQKTSLTSLDQKR-DENSGRG------LIVQKTSLTSLDQKRDESCRRVP 240
               ++  P           +KR D   G        L  +K S+ S D ++    +++P
Sbjct: 181 DASQAATAPNESVGHSRVCQEKRIDPTFGSSREITTKLNKEKKSVPSKDNRKVSKEKKMP 240

Query: 241 PVQKTSLTSLDQKRDENSGRGLIVQKTSLTMPDTPVAVKDPISKPNIKDLPLHAVDIGST 300
            +  +S   L+Q++  +S +            +TP   K                     
Sbjct: 241 SL--SSCNPLEQEKPTSSHQ------------ETPGPSK-------------------LL 300

Query: 301 HRKRKPSDSA-YEDLFDKWVPPTLQ--LGQQTDDEEWL---FGTKK-QDERTKTNQASSH 360
            RK  PS +    +L + W P  ++  L    D E WL   FG K  Q    KTNQ S  
Sbjct: 301 CRKCPPSMAGQLLNLIENWAPDRVESKLTDSEDQEWWLFIKFGAKSPQVSNQKTNQGS-- 324

Query: 361 APICRSSSLWPRGQFVPEADVYMLPYTIPF 375
                SS +WP  +F+PEA+V+ LP+T+PF
Sbjct: 361 -----SSMVWPTARFLPEAEVHALPFTVPF 324

[Close]

BLAST of Carg03983 vs. TAIR 10
Match: AT1G75860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20100.1); Has 258 Blast hits to 235 proteins in 58 species: Archae - 0; Bacteria - 4; Metazoa - 59; Fungi - 16; Plants - 90; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 9.9e-09
Identity = 102/392 (26.02%), Postives = 152/392 (38.78%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVARTEAALIEPIKL----LSERREKGTERKKEKSKHKKEKSKDKK 60
           MSR    PP  + R     +  L+E  KL    L  ++    E KKEK + +KEK + K+
Sbjct: 1   MSRVLTCPPLVFARNHVGVQ-NLVESTKLKRITLDSKKAHRIE-KKEKKEKRKEKKETKR 60

Query: 61  HKSKEHRDKSSRSRRDSNGQKQKEVKDLLKGTKVEAEQLEKSGLTEEHGQPVWPQSPGYL 120
            KS +H  K++ +         K+V D       E++ LEKSGLT+E  +P   +  GYL
Sbjct: 61  EKSHKHSIKATDNHHKLIFLPSKKVSD-------ESDSLEKSGLTDELEEP--QKHLGYL 120

Query: 121 SDGTQSNHKRKRGASIQPNEDC-----KPGKVIRIKLASSLSQQEDSSAGSEQ-TCSTTG 180
           SDG+Q++ KR R  S    E         GK +RI++     ++E  +   E   CSTT 
Sbjct: 121 SDGSQNSKKRIRDDSPPAVESLIKAAPVAGKPLRIRMVFKKPKEEVPTLPREAVVCSTTV 180

Query: 181 RRNSLHQTRDGNSSRVPIVQKTSLTSLDQKRDENSGRGLIVQKTSLTSLDQKRDESCRRV 240
            ++  HQ                                 V  +S++S            
Sbjct: 181 AKSLSHQD--------------------------------VITSSISS------------ 240

Query: 241 PPVQKTSLTSLDQKRDENSGRGLIVQKTSLTMPDTPVAVKDPISKPNIKDLPLHAVDIGS 300
               KTS                   +    +P T +A  D   K               
Sbjct: 241 ---SKTS-------------------ELEKNLPSTSIAAIDETKK--------------- 297

Query: 301 THRKRKPSDSAYEDLFDKWVPPTLQLGQQTDDEE---WLFGTKKQD-----ERTKTNQAS 360
             + R   +  Y  LFD W PP++ +   + ++    WLFG K Q+        K +  +
Sbjct: 301 RKKHRSSKEDQYNALFDGWTPPSMCIADASSNDNGDYWLFGNKTQEVLKPKAAVKVDDDT 297

Query: 361 SHAPICRSSSLWPRGQFVPEADVYMLPYTIPF 375
              P     S WPR QF+ E  +Y LPYT+PF
Sbjct: 361 MMRP---GDSSWPRAQFLSEVGIYSLPYTVPF 297

[Close]

BLAST of Carg03983 vs. TAIR 10
Match: AT4G35940.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17787.1). )

HSP 1 Score: 58.9 bits (141), Expect = 9.9e-09
Identity = 104/418 (24.88%), Postives = 171/418 (40.91%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVARTEAALIEPIKLLSERREKGTERK--------KEKSKHKKEKS 60
           MSRCFP+PPPGYV    R EA ++  IK + E+ +K   RK        K+  K +KEK 
Sbjct: 1   MSRCFPFPPPGYVLNGIRDEAVIVSSIKGVEEKAKKEQRRKDRRSDKKDKKDKKERKEKK 60

Query: 61  KDKKHKSKEHRDKSSRSRRDSNGQKQKE----VKDLLKGTKVEAEQLEKSGLTEEHGQPV 120
           + K+ K KE   K   S + S+ +++KE    V    K  + E   LEKS LT E     
Sbjct: 61  EKKEKKRKEREGKEVGSEKRSHKRRRKEDGAKVDLFHKLKESEVNCLEKSSLTVER---- 120

Query: 121 WPQSPGYLSDGTQSNHKRKRGASIQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCST 180
                    +  QS  +    +++  NE     K ++  L    +   +     +Q    
Sbjct: 121 ---------ELLQSTSQNSCDSTLNSNEMLPKQKEVQQPLDGRHNNNNNEKRVEKQQ-PL 180

Query: 181 TGRRNSLHQTR-------DG---NSSRVPIVQKTSLTSLDQKRDENSGRGLIVQKTSLTS 240
            GR N+ ++ R       DG   N++   I ++  L      R  N+   L+ ++  L  
Sbjct: 181 DGRHNNNNEKRVEKQQPLDGRHNNNNEKRIEKQQPLNG----RHNNNNEKLMEKQQPLNG 240

Query: 241 LDQKRDESCRRVPPVQKTSLTSLDQKRDENSGRGLIVQKTSLTMPD-----TPVAVKDPI 300
                +E  +R+   Q  +    ++++ +   + L V+  +    +          KDPI
Sbjct: 241 RHNNNNE--KRIEKQQPLNGRHNNKEKQKEKQQPLDVRHNNNDSAEHASKPREEKRKDPI 300

Query: 301 SKPNIKDLPLHAVDIGSTHRKRKPSDS----------AYEDLFDKWVPPTLQLGQ---QT 360
            +          +   ST    +P  S           + D+ + WVP T++       +
Sbjct: 301 FRGKHGK---EKISSSSTRETYQPPKSLCNCPPSMVLQFLDVVENWVPNTIERRVDLINS 360

Query: 361 DDEEWLFGTKKQDERT----KTNQASSHAPICRSSSLWPRGQFVPEADVYMLPYTIPF 375
           +DEE  +  KK    T    K     +      ++  WP  + +PEADVY LPYT+PF
Sbjct: 361 EDEECWWSMKKPPSSTTEICKQLNRENEIKQVGNTMGWPCARLLPEADVYALPYTVPF 395

[Close]

BLAST of Carg03983 vs. TAIR 10
Match: AT4G35940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17787.1); Has 45288 Blast hits to 24095 proteins in 1140 species: Archae - 93; Bacteria - 2895; Metazoa - 13424; Fungi - 2873; Plants - 1183; Viruses - 123; Other Eukaryotes - 24697 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 2.7e-06
Identity = 109/469 (23.24%), Postives = 178/469 (37.95%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVARTEAALIEPIKLLSERREKGTERK--------KEKSKHKKEKS 60
           MSRCFP+PPPGYV    R EA ++  IK + E+ +K   RK        K+  K +KEK 
Sbjct: 1   MSRCFPFPPPGYVLNGIRDEAVIVSSIKGVEEKAKKEQRRKDRRSDKKDKKDKKERKEKK 60

Query: 61  KDKKHKSKEHRDKSSRSRRDSNGQKQKE----VKDLLKGTKVEAEQLEKSGLTEEHGQPV 120
           + K+ K KE   K   S + S+ +++KE    V    K  + E   LEKS LT E     
Sbjct: 61  EKKEKKRKEREGKEVGSEKRSHKRRRKEDGAKVDLFHKLKESEVNCLEKSSLTVER---- 120

Query: 121 WPQSPGYLSDGTQSNHKRKRGASIQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCST 180
                    +  QS  +    +++  NE     K ++  L    +   +     +Q    
Sbjct: 121 ---------ELLQSTSQNSCDSTLNSNEMLPKQKEVQQPLDGRHNNNNNEKRVEKQQ-PL 180

Query: 181 TGRRNSLHQTR-------DG---NSSRVPIVQKTSLTSLDQKRDENSGRGLIVQKTSLTS 240
            GR N+ ++ R       DG   N++   I ++  L      R  N+   L+ ++  L  
Sbjct: 181 DGRHNNNNEKRVEKQQPLDGRHNNNNEKRIEKQQPLNG----RHNNNNEKLMEKQQPLNG 240

Query: 241 LDQKRDES-CRRVPPV---------QKTSLTSLDQKRDENSGRGLI-------------V 300
                +E    +  P+         QK     LD + + N    +I             V
Sbjct: 241 RHNNNNEKRIEKQQPLNGRHNNKEKQKEKQQPLDVRHNNNDSESIIRIRLPIRRQKDPEV 300

Query: 301 QKTS-----------LTMPDTPVAVKDPISK-PNIKDLPLHA------------------ 360
             T+           + +  + +  ++P+++ P       HA                  
Sbjct: 301 MMTNKDQEKPGPSRGIKLDSSQLPTREPVNQHPCSTSAAEHASKPREEKRKDPIFRGKHG 360

Query: 361 ---VDIGSTHRKRKPSDS----------AYEDLFDKWVPPTLQLGQ---QTDDEEWLFGT 375
              +   ST    +P  S           + D+ + WVP T++       ++DEE  +  
Sbjct: 361 KEKISSSSTRETYQPPKSLCNCPPSMVLQFLDVVENWVPNTIERRVDLINSEDEECWWSM 420

The following BLAST results are available for this feature:

BLAST of Carg03983 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020444.1	8.5e-204	100.00	hypothetical protein SDJN02_17128, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6585530.1	1.6e-202	99.47	hypothetical protein SDJN03_18263, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022951331.1	3.0e-177	91.22	uncharacterized protein LOC111454195 isoform X1 [Cucurbita moschata]	[more]
XP_023538217.1	2.0e-176	90.40	uncharacterized protein LOC111799057 [Cucurbita pepo subsp. pepo]	[more]
XP_023002403.1	8.0e-170	87.43	uncharacterized protein LOC111496256 [Cucurbita maxima]	[more]

BLAST of Carg03983 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg03983 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GHA3	1.5e-177	91.22	uncharacterized protein LOC111454195 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KTG3	3.9e-170	87.43	uncharacterized protein LOC111496256 OS=Cucurbita maxima OX=3661 GN=LOC111496256...	[more]
A0A6J1GHB8	3.9e-162	85.37	uncharacterized protein LOC111454195 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HBK0	2.9e-93	56.85	DNA ligase 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462522 PE=4 SV=1	[more]
A0A6J1KC15	1.1e-92	58.72	uncharacterized protein LOC111492505 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Carg03983 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20100.1	2.8e-11	27.06	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G17787.1	3.4e-09	27.44	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G75860.1	9.9e-09	26.02	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G35940.2	9.9e-09	24.88	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G35940.1	2.7e-06	23.24	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 78..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 329..349
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..249
None	No IPR available	PANTHER	PTHR34660:SF7	DNA LIGASE	coord: 1..374
None	No IPR available	PANTHER	PTHR34660	MYB-LIKE PROTEIN X	coord: 1..374

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03983-RA	Carg03983-RA	mRNA