Carg03972 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg03972
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionThioredoxin
LocationCarg_Chr12: 2339847 .. 2341507 (+)
RNA-Seq ExpressionCarg03972
SyntenyCarg03972
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAGATCTTCTTGATAACTCCATAGCCATCCCCTGCAATTCAGAGCAGAGCAGAGCAGAAACAGAGCCTCCCCTGTTCTATTCCCTTTCTCCGCCGCACTCCGATGGCTTCCTTCTCCCACTCTCTCACCACACCTCCACCCTCTCTCTCTCTCCACACCCACAACAACCGCCTCCTCTCCGCCGCTTCCCTCCTCCCCAATCTCATCAAACCCACCGCCTTCGCTGCAAATTTACACCTCTCCCACCGCCGCCGCGGCTTCACAATCAAAGCCACCGCTGCTCCGAGCGTGAAGAAACCCACCGGCGATGAGCGAGTCCAGCAAGTCCACAGCGCGGAGGAGTTCGATGAAGCCCTTAAGAAAGCCAAAAGCAAGCTGGTTGTGGTGGAATTCGCCGCCTCACACAGCGCGCAGAGCAGCCGGATGTACCCGTTCATGGTGACACTCAGCAAAACGTGTAACGATGTGGAGTTCATTTTGGTGATGGGCGATGAATCGGAGCAAACCAAAGAGCTCTGTAACAGAGAGAAAATCGAAAAGGTTCCTCACTTCAGGTAAAATTCTGTAATTAATTTATAATTTATTTGGTTTTTAAATATCTAAATTTTATTGAATTTAATAAAATTATTATATTAATTAACTTTTAAGATATGCTAAATTCTAAATAAAAAATTATTAAAAATGACGCGAGATAACGTAACGGTGATTAGAATACGTGCATGGATGAAGTTTAGAGATGAGTTTAGGTTTAAAAGTAAAACGCTTCCTACGTTCTAAAATCACTTAAGAAAGTATCGTTTTTCGCCTCCAGCTTCTACAAGAACATGGAGAAGATCCACGAGGAGGAAGGGATCGGGCCGGATCAGCTGGAGGGCGACGTATTATACTACGGCGACAGCCATTCAGGAGTTGTTCAGCTACACAGCAGGGAGGATGTGGAGAAACTGATACAAGACCACAAGGAGGATCACAAGCTGATTGTACTGGACGTGGGGTTGAAGCATTGTGGACCTTGCGTGAAAGTCTATCCCACAGTGATCAAGTTGTCGAAGAAAATGGACACGGCGGTGTTCGCTAGAATGAACGGCGATGAGAACGAGAGCTGTATGCAGTTTTTGAAAGACATGGACGTTGTCGAAGTGCCTACGTTTTTGTTCATAAGAGATGGAGAGATTAAAGGGAGGTACGTCGGGTCGGGTAAAGGAGAGCTTATTGGTGAGATTCTTAGATATCAAGGAGTTCGTGTTACTTATTGAGTTTGAGGGTTTGGAAGTTTAGTTTCTAATTAATGGTGGGATTTTGGTGCATGACGGGTCACTGTTATATACTGTGATGAGTTGTTTATTATGGTTTAAATTTGGTGTCACTTTGAAATATGATTCAAGTTGTGACAGGTCACCATTATATATATAACCTCGACTAAAATGTCATAGATTTTGAATCTTTCCACTAGAGAAAAACATTTCATACCCTAATCCCTAAACCTCGAGATAAAAAACCTTAAAAAGGGATGTCGTAACTTGTAATGTTCATAACGTTCATAGCGCCTAATTTGAATTCACTCAAGGGAGTCCCAATTTACTGCAATCATGTCTTTCAAATATATTTCCAATTGAATGATGATGAATATTCAACTACATTCCTATGGATTAATAGCAAT

mRNA sequence

TAAGATCTTCTTGATAACTCCATAGCCATCCCCTGCAATTCAGAGCAGAGCAGAGCAGAAACAGAGCCTCCCCTGTTCTATTCCCTTTCTCCGCCGCACTCCGATGGCTTCCTTCTCCCACTCTCTCACCACACCTCCACCCTCTCTCTCTCTCCACACCCACAACAACCGCCTCCTCTCCGCCGCTTCCCTCCTCCCCAATCTCATCAAACCCACCGCCTTCGCTGCAAATTTACACCTCTCCCACCGCCGCCGCGGCTTCACAATCAAAGCCACCGCTGCTCCGAGCGTGAAGAAACCCACCGGCGATGAGCGAGTCCAGCAAGTCCACAGCGCGGAGGAGTTCGATGAAGCCCTTAAGAAAGCCAAAAGCAAGCTGGTTGTGGTGGAATTCGCCGCCTCACACAGCGCGCAGAGCAGCCGGATGTACCCGTTCATGGTGACACTCAGCAAAACGTGTAACGATGTGGAGTTCATTTTGGTGATGGGCGATGAATCGGAGCAAACCAAAGAGCTCTGTAACAGAGAGAAAATCGAAAAGGTTCCTCACTTCAGCTTCTACAAGAACATGGAGAAGATCCACGAGGAGGAAGGGATCGGGCCGGATCAGCTGGAGGGCGACGTATTATACTACGGCGACAGCCATTCAGGAGTTGTTCAGCTACACAGCAGGGAGGATGTGGAGAAACTGATACAAGACCACAAGGAGGATCACAAGCTGATTGTACTGGACGTGGGGTTGAAGCATTGTGGACCTTGCGTGAAAGTCTATCCCACAGTGATCAAGTTGTCGAAGAAAATGGACACGGCGGTGTTCGCTAGAATGAACGGCGATGAGAACGAGAGCTGTATGCAGTTTTTGAAAGACATGGACGTTGTCGAAGTGCCTACGTTTTTGTTCATAAGAGATGGAGAGATTAAAGGGAGGTACGTCGGGTCGGGTAAAGGAGAGCTTATTGGTGAGATTCTTAGATATCAAGGAGTTCGTGTTACTTATTGAGTTTGAGGGTTTGGAAGTTTAGTTTCTAATTAATGGTGGGATTTTGGTGCATGACGGGTCACTGTTATATACTGTGATGAGTTGTTTATTATGGTTTAAATTTGGTGTCACTTTGAAATATGATTCAAGTTGTGACAGGTCACCATTATATATATAACCTCGACTAAAATGTCATAGATTTTGAATCTTTCCACTAGAGAAAAACATTTCATACCCTAATCCCTAAACCTCGAGATAAAAAACCTTAAAAAGGGATGTCGTAACTTGTAATGTTCATAACGTTCATAGCGCCTAATTTGAATTCACTCAAGGGAGTCCCAATTTACTGCAATCATGTCTTTCAAATATATTTCCAATTGAATGATGATGAATATTCAACTACATTCCTATGGATTAATAGCAAT

Coding sequence (CDS)

ATGGCTTCCTTCTCCCACTCTCTCACCACACCTCCACCCTCTCTCTCTCTCCACACCCACAACAACCGCCTCCTCTCCGCCGCTTCCCTCCTCCCCAATCTCATCAAACCCACCGCCTTCGCTGCAAATTTACACCTCTCCCACCGCCGCCGCGGCTTCACAATCAAAGCCACCGCTGCTCCGAGCGTGAAGAAACCCACCGGCGATGAGCGAGTCCAGCAAGTCCACAGCGCGGAGGAGTTCGATGAAGCCCTTAAGAAAGCCAAAAGCAAGCTGGTTGTGGTGGAATTCGCCGCCTCACACAGCGCGCAGAGCAGCCGGATGTACCCGTTCATGGTGACACTCAGCAAAACGTGTAACGATGTGGAGTTCATTTTGGTGATGGGCGATGAATCGGAGCAAACCAAAGAGCTCTGTAACAGAGAGAAAATCGAAAAGGTTCCTCACTTCAGCTTCTACAAGAACATGGAGAAGATCCACGAGGAGGAAGGGATCGGGCCGGATCAGCTGGAGGGCGACGTATTATACTACGGCGACAGCCATTCAGGAGTTGTTCAGCTACACAGCAGGGAGGATGTGGAGAAACTGATACAAGACCACAAGGAGGATCACAAGCTGATTGTACTGGACGTGGGGTTGAAGCATTGTGGACCTTGCGTGAAAGTCTATCCCACAGTGATCAAGTTGTCGAAGAAAATGGACACGGCGGTGTTCGCTAGAATGAACGGCGATGAGAACGAGAGCTGTATGCAGTTTTTGAAAGACATGGACGTTGTCGAAGTGCCTACGTTTTTGTTCATAAGAGATGGAGAGATTAAAGGGAGGTACGTCGGGTCGGGTAAAGGAGAGCTTATTGGTGAGATTCTTAGATATCAAGGAGTTCGTGTTACTTATTGA

Protein sequence

MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAFAANLHLSHRRRGFTIKATAAPSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCNDVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDSHSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFARMNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY
Homology
[Close]
BLAST of Carg03972 vs. NCBI nr
Match: KAG6585520.1 (Thioredoxin-like protein CDSP32, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020433.1 Thioredoxin-like protein CDSP32, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 593.2 bits (1528), Expect = 1.3e-165
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0 

Query: 1   MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAFAANLHLSHRRRGFTIKATAA 60
           MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAFAANLHLSHRRRGFTIKATAA
Sbjct: 1   MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAFAANLHLSHRRRGFTIKATAA 60

Query: 61  PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN 120
           PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN
Sbjct: 61  PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN 120

Query: 121 DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDS 180
           DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDS
Sbjct: 121 DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDS 180

Query: 181 HSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR 240
           HSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR
Sbjct: 181 HSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR 240

Query: 241 MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY 299
           MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY
Sbjct: 241 MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY 298

[Close]
BLAST of Carg03972 vs. NCBI nr
Match: XP_022951937.1 (thioredoxin-like protein CDSP32, chloroplastic [Cucurbita moschata])

HSP 1 Score: 590.9 bits (1522), Expect = 6.2e-165
Identity = 296/298 (99.33%), Postives = 298/298 (100.00%), Query Frame = 0 

Query: 1   MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAFAANLHLSHRRRGFTIKATAA 60
           MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAF++NLHLSHRRRGFTIKATAA
Sbjct: 1   MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAFSSNLHLSHRRRGFTIKATAA 60

Query: 61  PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN 120
           PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN
Sbjct: 61  PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN 120

Query: 121 DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDS 180
           DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDS
Sbjct: 121 DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDS 180

Query: 181 HSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR 240
           HSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR
Sbjct: 181 HSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR 240

Query: 241 MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY 299
           MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY
Sbjct: 241 MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY 298

[Close]
BLAST of Carg03972 vs. NCBI nr
Match: XP_023538539.1 (thioredoxin-like protein CDSP32, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 589.3 bits (1518), Expect = 1.8e-164
Identity = 295/298 (98.99%), Postives = 297/298 (99.66%), Query Frame = 0 

Query: 1   MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAFAANLHLSHRRRGFTIKATAA 60
           MASFSHSLTTPPPSLSLHTHNNRLLS ASLLPNLIKPTAF+ANLHLSHRRRGFTIKATAA
Sbjct: 1   MASFSHSLTTPPPSLSLHTHNNRLLSGASLLPNLIKPTAFSANLHLSHRRRGFTIKATAA 60

Query: 61  PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN 120
           PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN
Sbjct: 61  PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN 120

Query: 121 DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDS 180
           DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGD+
Sbjct: 121 DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDN 180

Query: 181 HSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR 240
           HSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR
Sbjct: 181 HSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR 240

Query: 241 MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY 299
           MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY
Sbjct: 241 MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY 298

[Close]
BLAST of Carg03972 vs. NCBI nr
Match: XP_023002451.1 (thioredoxin-like protein CDSP32, chloroplastic [Cucurbita maxima])

HSP 1 Score: 585.1 bits (1507), Expect = 3.4e-163
Identity = 292/298 (97.99%), Postives = 296/298 (99.33%), Query Frame = 0 

Query: 1   MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAFAANLHLSHRRRGFTIKATAA 60
           MASFSHSLTTPPPSLSLHTHNNRLLSA SL+PNLIKP AF+ANLHLSHRRRGFTIKATAA
Sbjct: 1   MASFSHSLTTPPPSLSLHTHNNRLLSATSLIPNLIKPAAFSANLHLSHRRRGFTIKATAA 60

Query: 61  PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN 120
           PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN
Sbjct: 61  PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN 120

Query: 121 DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDS 180
           DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGD+
Sbjct: 121 DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDN 180

Query: 181 HSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR 240
           HSGVVQLHSREDVEKLIQ+HKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR
Sbjct: 181 HSGVVQLHSREDVEKLIQEHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR 240

Query: 241 MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY 299
           MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY
Sbjct: 241 MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY 298

[Close]
BLAST of Carg03972 vs. NCBI nr
Match: XP_038886711.1 (thioredoxin-like protein CDSP32, chloroplastic [Benincasa hispida])

HSP 1 Score: 478.8 bits (1231), Expect = 3.4e-131
Identity = 251/306 (82.03%), Postives = 266/306 (86.93%), Query Frame = 0 

Query: 1   MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAFAANLHLSH--------RRRG 60
           MASFS       P+ SL+T N R     SL+PNLIKP A + + + S         RRR 
Sbjct: 1   MASFS-------PAPSLYTQNTR----PSLIPNLIKPAAPSISAYYSSPRLITTPLRRRA 60

Query: 61  FTIKATAAPSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFM 120
             I+ATAAPSVKK + DERV QVHS EEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFM
Sbjct: 61  LRIQATAAPSVKKQSSDERVLQVHSKEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFM 120

Query: 121 VTLSKTCNDVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEG 180
           V+LSKTCNDVEFILVMGDESE+TKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEG
Sbjct: 121 VSLSKTCNDVEFILVMGDESEKTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEG 180

Query: 181 DVLYYGDSHSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKK 240
           DVLYYGD+HS VVQLHSREDVE LI +HK+DHKLIVLDVGLKHCGPCVKVYPTVIKLSKK
Sbjct: 181 DVLYYGDNHSAVVQLHSREDVETLIGEHKDDHKLIVLDVGLKHCGPCVKVYPTVIKLSKK 240

Query: 241 MDTAVFARMNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQ 299
           MDT VFARMNGDENESCM+FLKDM+VVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQ
Sbjct: 241 MDTVVFARMNGDENESCMKFLKDMNVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQ 295

[Close]
BLAST of Carg03972 vs. ExPASy Swiss-Prot
Match: Q9SGS4 (Thioredoxin-like protein CDSP32, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CDSP32 PE=1 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 9.8e-105
Identity = 191/248 (77.02%), Postives = 215/248 (86.69%), Query Frame = 0 

Query: 55  IKATAAPSVK---KPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPF 114
           IKA AA   K    P  DE+VQ++HS EEFD ALK AKSKLVV EFA S S QS+++YPF
Sbjct: 55  IKAGAASPGKVGTPPANDEKVQKIHSGEEFDVALKNAKSKLVVAEFATSKSDQSNKIYPF 114

Query: 115 MVTLSKTCNDVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLE 174
           MV LS+TCNDV F+LVMGDES++T+ELC REKIEKVPHFSFYK+MEKIHEEEGI PDQL 
Sbjct: 115 MVELSRTCNDVVFLLVMGDESDKTRELCRREKIEKVPHFSFYKSMEKIHEEEGIEPDQLM 174

Query: 175 GDVLYYGDSHSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSK 234
           GDVLYYGD+HS VVQLH R DVEKLI +++   KLIVLDVGLKHCGPCVKVYPTV+KLS+
Sbjct: 175 GDVLYYGDNHSAVVQLHGRPDVEKLIDENRTGGKLIVLDVGLKHCGPCVKVYPTVLKLSR 234

Query: 235 KM-DTAVFARMNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILR 294
            M +T VFARMNGDEN+SCM+FLKDM+V+EVPTFLFIRDGEI+GRYVGSGKGELIGEILR
Sbjct: 235 SMSETVVFARMNGDENDSCMEFLKDMNVIEVPTFLFIRDGEIRGRYVGSGKGELIGEILR 294

Query: 295 YQGVRVTY 299
           Y GVRVTY
Sbjct: 295 YSGVRVTY 302

[Close]
BLAST of Carg03972 vs. ExPASy Swiss-Prot
Match: Q84NN4 (Thioredoxin-like protein CDSP32, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CDSP32 PE=2 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.5e-100
Identity = 187/265 (70.57%), Postives = 212/265 (80.00%), Query Frame = 0 

Query: 46  LSHRRRGFTIKATAAPSVKKPT-----------GDERVQQVHSAEEFDEALKKAKSKLVV 105
           L  RRRG  ++A  + + + P            GDERV QVHSAEE D AL+ AK +LVV
Sbjct: 37  LRRRRRGGAVRAAVSGTEQAPETTKKKGGGGGGGDERVVQVHSAEELDGALRAAKERLVV 96

Query: 106 VEFAASHSAQSSRMYPFMVTLSKTCNDVEFILVMGDESEQTKELCNREKIEKVPHFSFYK 165
           VEFAASHS  SSR+YP MV LS+TC DV+F+LVMGDES+ T+ELC RE I  VPHF+FYK
Sbjct: 97  VEFAASHSVNSSRIYPCMVELSRTCGDVDFLLVMGDESDATRELCRREGITAVPHFTFYK 156

Query: 166 NMEKIHEEEGIGPDQLEGDVLYYGDSHSGVVQLHSREDVEKLIQDHK-EDHKLIVLDVGL 225
             EK+HEEEGIGPDQL GDVLYYGD HS VVQLHSR DVE LI DH+ E  KL+VLDVGL
Sbjct: 157 GAEKVHEEEGIGPDQLAGDVLYYGDHHSAVVQLHSRADVESLISDHRGEGGKLVVLDVGL 216

Query: 226 KHCGPCVKVYPTVIKLSKKM-DTAVFARMNGDENESCMQFLKDMDVVEVPTFLFIRDGEI 285
           K CGPCVKVYPTV+KLS+ M DT VFARMNGDEN+SCM+FL+DMDVVEVPTFLFIRDG+I
Sbjct: 217 KRCGPCVKVYPTVVKLSRTMADTTVFARMNGDENDSCMEFLRDMDVVEVPTFLFIRDGDI 276

Query: 286 KGRYVGSGKGELIGEILRYQGVRVT 298
            GRYVGSG+GELIGEILRY GV+VT
Sbjct: 277 VGRYVGSGRGELIGEILRYNGVKVT 301

[Close]
BLAST of Carg03972 vs. ExPASy Swiss-Prot
Match: Q07090 (Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.0e-09
Identity = 36/108 (33.33%), Postives = 61/108 (56.48%), Query Frame = 0 

Query: 184 VVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFARMNG 243
           V+ +H+ +   + +Q   +D KLIV+D     CGPC  +     +L+KKM T  F +++ 
Sbjct: 7   VIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVTFLKVDV 66

Query: 244 DENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRY 292
           DE +S      D  V  +PTF+F+++G+I  + VG+ K EL   I ++
Sbjct: 67  DELKS---VATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKH 111

[Close]
BLAST of Carg03972 vs. ExPASy Swiss-Prot
Match: O65049 (Thioredoxin H-type OS=Picea mariana OX=3335 GN=SB09 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.5e-09
Identity = 33/105 (31.43%), Postives = 54/105 (51.43%), Query Frame = 0 

Query: 180 SHSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFA 239
           +   V   HS E     +Q+  +  +L+ +D     CGPC  + P  ++LSKK     F 
Sbjct: 2   AEGNVFACHSTEGWRSKLQEAIDTKRLVAVDFTATWCGPCRVIGPVFVELSKKFPEIFFL 61

Query: 240 RMNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGEL 285
           +++ DE     Q   + DV  +PTF+FI+DG+   + VG+ K +L
Sbjct: 62  KVDVDELRDVAQ---EWDVEAMPTFIFIKDGKAVDKVVGAKKDDL 103

[Close]
BLAST of Carg03972 vs. ExPASy Swiss-Prot
Match: Q6Z4I3 (Thioredoxin H2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190800 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 7.7e-09
Identity = 34/103 (33.01%), Postives = 53/103 (51.46%), Query Frame = 0 

Query: 182 SGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFARM 241
           S VV +HS+   ++L   HK   KL+V+D     CGPC  + P   +++ +     F ++
Sbjct: 21  SAVVAVHSKAKWDELWDAHKNTTKLVVIDFSASWCGPCKMMEPVFKEMAGRFTDVAFLKV 80

Query: 242 NGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGEL 285
           + DE     +  +   V  +PTF+  R GE  GR VG+ K EL
Sbjct: 81  DVDE---LAEVARTWRVEAMPTFVLARGGEEVGRIVGADKDEL 120

[Close]
BLAST of Carg03972 vs. ExPASy TrEMBL
Match: A0A6J1GJ10 (thioredoxin-like protein CDSP32, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111454673 PE=4 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 3.0e-165
Identity = 296/298 (99.33%), Postives = 298/298 (100.00%), Query Frame = 0 

Query: 1   MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAFAANLHLSHRRRGFTIKATAA 60
           MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAF++NLHLSHRRRGFTIKATAA
Sbjct: 1   MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAFSSNLHLSHRRRGFTIKATAA 60

Query: 61  PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN 120
           PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN
Sbjct: 61  PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN 120

Query: 121 DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDS 180
           DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDS
Sbjct: 121 DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDS 180

Query: 181 HSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR 240
           HSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR
Sbjct: 181 HSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR 240

Query: 241 MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY 299
           MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY
Sbjct: 241 MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY 298

[Close]
BLAST of Carg03972 vs. ExPASy TrEMBL
Match: A0A6J1KLC1 (thioredoxin-like protein CDSP32, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111496287 PE=4 SV=1)

HSP 1 Score: 585.1 bits (1507), Expect = 1.6e-163
Identity = 292/298 (97.99%), Postives = 296/298 (99.33%), Query Frame = 0 

Query: 1   MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAFAANLHLSHRRRGFTIKATAA 60
           MASFSHSLTTPPPSLSLHTHNNRLLSA SL+PNLIKP AF+ANLHLSHRRRGFTIKATAA
Sbjct: 1   MASFSHSLTTPPPSLSLHTHNNRLLSATSLIPNLIKPAAFSANLHLSHRRRGFTIKATAA 60

Query: 61  PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN 120
           PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN
Sbjct: 61  PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN 120

Query: 121 DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDS 180
           DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGD+
Sbjct: 121 DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDN 180

Query: 181 HSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR 240
           HSGVVQLHSREDVEKLIQ+HKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR
Sbjct: 181 HSGVVQLHSREDVEKLIQEHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR 240

Query: 241 MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY 299
           MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY
Sbjct: 241 MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY 298

[Close]
BLAST of Carg03972 vs. ExPASy TrEMBL
Match: A0A5A7VGK4 (Thioredoxin-like protein CDSP32 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001640 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.5e-127
Identity = 246/305 (80.66%), Postives = 267/305 (87.54%), Query Frame = 0 

Query: 1   MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAFAAN---LHL----SHRRRGF 60
           MASFSHSLTTPPP  SL+THN R     SL+PNLIK  A AA+   L L       RR  
Sbjct: 1   MASFSHSLTTPPP--SLYTHNPR----PSLIPNLIKLPAAAASSPPLRLITAPRRARRAL 60

Query: 61  TIKATAAPSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMV 120
            I ATA+PSVKK + DERV +VHS EEFDEALKKAKSKLVVVE+AAS S QSS+MYPFMV
Sbjct: 61  QIHATASPSVKKQSSDERVLKVHSKEEFDEALKKAKSKLVVVEYAASDSEQSSQMYPFMV 120

Query: 121 TLSKTCNDVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGD 180
           +LS++C+DVEFILVMGDESE+TKEL +REKIEKVPHFSFYKNMEKIHEEEGIGPD+LEGD
Sbjct: 121 SLSRSCSDVEFILVMGDESEKTKELFDREKIEKVPHFSFYKNMEKIHEEEGIGPDRLEGD 180

Query: 181 VLYYGDSHSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKM 240
           VLYYGD+HS VVQLHS EDVEKLI +HKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKM
Sbjct: 181 VLYYGDNHSAVVQLHSGEDVEKLIGEHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKM 240

Query: 241 DTAVFARMNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQG 299
           +T VFARMNGDEN SCM+FLKDM+VVEVPTFLFIRDGEIKGRYVGSG+GELIGEILRYQG
Sbjct: 241 ETVVFARMNGDENASCMKFLKDMNVVEVPTFLFIRDGEIKGRYVGSGRGELIGEILRYQG 299

[Close]
BLAST of Carg03972 vs. ExPASy TrEMBL
Match: A0A1S3BD95 (thioredoxin-like protein CDSP32, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488385 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.5e-127
Identity = 246/305 (80.66%), Postives = 267/305 (87.54%), Query Frame = 0 

Query: 1   MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAFAAN---LHL----SHRRRGF 60
           MASFSHSLTTPPP  SL+THN R     SL+PNLIK  A AA+   L L       RR  
Sbjct: 1   MASFSHSLTTPPP--SLYTHNPR----PSLIPNLIKLPAAAASSPPLRLITAPRRARRAL 60

Query: 61  TIKATAAPSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMV 120
            I ATA+PSVKK + DERV +VHS EEFDEALKKAKSKLVVVE+AAS S QSS+MYPFMV
Sbjct: 61  QIHATASPSVKKQSSDERVLKVHSKEEFDEALKKAKSKLVVVEYAASDSEQSSQMYPFMV 120

Query: 121 TLSKTCNDVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGD 180
           +LS++C+DVEFILVMGDESE+TKEL +REKIEKVPHFSFYKNMEKIHEEEGIGPD+LEGD
Sbjct: 121 SLSRSCSDVEFILVMGDESEKTKELFDREKIEKVPHFSFYKNMEKIHEEEGIGPDRLEGD 180

Query: 181 VLYYGDSHSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKM 240
           VLYYGD+HS VVQLHS EDVEKLI +HKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKM
Sbjct: 181 VLYYGDNHSAVVQLHSGEDVEKLIGEHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKM 240

Query: 241 DTAVFARMNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQG 299
           +T VFARMNGDEN SCM+FLKDM+VVEVPTFLFIRDGEIKGRYVGSG+GELIGEILRYQG
Sbjct: 241 ETVVFARMNGDENASCMKFLKDMNVVEVPTFLFIRDGEIKGRYVGSGRGELIGEILRYQG 299

[Close]
BLAST of Carg03972 vs. ExPASy TrEMBL
Match: A0A1R3HYN5 (Thioredoxin OS=Corchorus olitorius OX=93759 GN=COLO4_26082 PE=4 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 2.7e-121
Identity = 230/300 (76.67%), Postives = 254/300 (84.67%), Query Frame = 0 

Query: 1   MASFSHSLTTPPPS-LSLHTHNNRLLSAASLLPNLI-KPTAFAANLHLSHRRRGFTIKAT 60
           MA+ ++ L+ PP S LS       +   AS LP+ + KP  F+  L  S   R F  KAT
Sbjct: 1   MATITNFLSKPPASDLSSIPKITSISPHASFLPSFVTKPRPFSTKLESSRSSR-FITKAT 60

Query: 61  AAPSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKT 120
           AAP  KK   DERV+QVHS EEFDEALK AK+KLVVVE+AASHS QSS++YPFMV LS+T
Sbjct: 61  AAPKTKKAPSDERVKQVHSIEEFDEALKSAKNKLVVVEYAASHSKQSSKIYPFMVELSRT 120

Query: 121 CNDVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYG 180
           CNDVEF+LVMGDESEQT+ELC REKIE+VPHFSFYK+ME IHEEEGIGPDQL GDVLYYG
Sbjct: 121 CNDVEFLLVMGDESEQTRELCKREKIEQVPHFSFYKSMELIHEEEGIGPDQLMGDVLYYG 180

Query: 181 DSHSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVF 240
           D+HS VVQLH REDVEKLI+DHK DHKLIVLDVGLKHCGPCVKVYPTVIKLS++MDTAVF
Sbjct: 181 DNHSAVVQLHCREDVEKLIEDHKADHKLIVLDVGLKHCGPCVKVYPTVIKLSRQMDTAVF 240

Query: 241 ARMNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY 299
           ARMNGDEN+SCMQFLKDMDV+EVPTFLFIRDGEI GRYVGSGKGELIGEILRYQGVRVTY
Sbjct: 241 ARMNGDENDSCMQFLKDMDVIEVPTFLFIRDGEICGRYVGSGKGELIGEILRYQGVRVTY 299

[Close]
BLAST of Carg03972 vs. TAIR 10
Match: AT1G76080.1 (chloroplastic drought-induced stress protein of 32 kD )

HSP 1 Score: 381.3 bits (978), Expect = 7.0e-106
Identity = 191/248 (77.02%), Postives = 215/248 (86.69%), Query Frame = 0 

Query: 55  IKATAAPSVK---KPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPF 114
           IKA AA   K    P  DE+VQ++HS EEFD ALK AKSKLVV EFA S S QS+++YPF
Sbjct: 55  IKAGAASPGKVGTPPANDEKVQKIHSGEEFDVALKNAKSKLVVAEFATSKSDQSNKIYPF 114

Query: 115 MVTLSKTCNDVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLE 174
           MV LS+TCNDV F+LVMGDES++T+ELC REKIEKVPHFSFYK+MEKIHEEEGI PDQL 
Sbjct: 115 MVELSRTCNDVVFLLVMGDESDKTRELCRREKIEKVPHFSFYKSMEKIHEEEGIEPDQLM 174

Query: 175 GDVLYYGDSHSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSK 234
           GDVLYYGD+HS VVQLH R DVEKLI +++   KLIVLDVGLKHCGPCVKVYPTV+KLS+
Sbjct: 175 GDVLYYGDNHSAVVQLHGRPDVEKLIDENRTGGKLIVLDVGLKHCGPCVKVYPTVLKLSR 234

Query: 235 KM-DTAVFARMNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILR 294
            M +T VFARMNGDEN+SCM+FLKDM+V+EVPTFLFIRDGEI+GRYVGSGKGELIGEILR
Sbjct: 235 SMSETVVFARMNGDENDSCMEFLKDMNVIEVPTFLFIRDGEIRGRYVGSGKGELIGEILR 294

Query: 295 YQGVRVTY 299
           Y GVRVTY
Sbjct: 295 YSGVRVTY 302

[Close]
BLAST of Carg03972 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 68.9 bits (167), Expect = 7.6e-12
Identity = 35/111 (31.53%), Postives = 63/111 (56.76%), Query Frame = 0 

Query: 184 VVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFARMNG 243
           V+  H+ E   + ++D  E  KLIV+D     C PC  + P   +++KK    VF +++ 
Sbjct: 7   VIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDV 66

Query: 244 DENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGV 295
           DE ++  Q  K   V  +PTF+F+++G I  R VG+ K E+  +++++ G+
Sbjct: 67  DELQAVAQEFK---VEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKHGGL 114

[Close]
BLAST of Carg03972 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 2.2e-11
Identity = 38/112 (33.93%), Postives = 64/112 (57.14%), Query Frame = 0 

Query: 184 VVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKK-MDTAVFARMN 243
           V+  H+ +     +   KE +KLIV+D     C PC  + P    L+KK M +A+F +++
Sbjct: 8   VIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVD 67

Query: 244 GDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGV 295
            DE +S     K+  V  +PTF+FI+ GE+  + VG+ K +L  +I+++ GV
Sbjct: 68  VDELQS---VAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHTGV 116

[Close]
BLAST of Carg03972 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 66.2 bits (160), Expect = 5.0e-11
Identity = 37/111 (33.33%), Postives = 61/111 (54.95%), Query Frame = 0 

Query: 184 VVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFARMNG 243
           V+  H+ ED  + ++   E  KLIV+D     C PC  + P    L+KK    VF +++ 
Sbjct: 7   VIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDV 66

Query: 244 DENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGV 295
           DE  +  +  K   V  +PTF+F+++GEIK   VG+ K E+I  + +++ V
Sbjct: 67  DELNTVAEEFK---VQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTV 114

[Close]
BLAST of Carg03972 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 63.9 bits (154), Expect = 2.5e-10
Identity = 33/108 (30.56%), Postives = 58/108 (53.70%), Query Frame = 0 

Query: 184 VVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFARMNG 243
           V+  H+ E   + +Q   E   L+V+D     CGPC  + P    L+KK+   +F +++ 
Sbjct: 8   VIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDT 67

Query: 244 DENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRY 292
           DE +S      D  +  +PTF+F+++G+I  + VG+ K EL   I ++
Sbjct: 68  DELKS---VASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

The following BLAST results are available for this feature:
BLAST of Carg03972 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6585520.11.3e-165100.00Thioredoxin-like protein CDSP32, chloroplastic, partial [Cucurbita argyrosperma ... [more]
XP_022951937.16.2e-16599.33thioredoxin-like protein CDSP32, chloroplastic [Cucurbita moschata][more]
XP_023538539.11.8e-16498.99thioredoxin-like protein CDSP32, chloroplastic [Cucurbita pepo subsp. pepo][more]
XP_023002451.13.4e-16397.99thioredoxin-like protein CDSP32, chloroplastic [Cucurbita maxima][more]
XP_038886711.13.4e-13182.03thioredoxin-like protein CDSP32, chloroplastic [Benincasa hispida][more]
BLAST of Carg03972 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SGS49.8e-10577.02Thioredoxin-like protein CDSP32, chloroplastic OS=Arabidopsis thaliana OX=3702 G... [more]
Q84NN42.5e-10070.57Thioredoxin-like protein CDSP32, chloroplastic OS=Oryza sativa subsp. japonica O... [more]
Q070902.0e-0933.33Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1[more]
O650494.5e-0931.43Thioredoxin H-type OS=Picea mariana OX=3335 GN=SB09 PE=2 SV=1[more]
Q6Z4I37.7e-0933.01Thioredoxin H2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190800 PE=2 S... [more]
BLAST of Carg03972 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GJ103.0e-16599.33thioredoxin-like protein CDSP32, chloroplastic OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1KLC11.6e-16397.99thioredoxin-like protein CDSP32, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A5A7VGK41.5e-12780.66Thioredoxin-like protein CDSP32 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A1S3BD951.5e-12780.66thioredoxin-like protein CDSP32, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103... [more]
A0A1R3HYN52.7e-12176.67Thioredoxin OS=Corchorus olitorius OX=93759 GN=COLO4_26082 PE=4 SV=1[more]
BLAST of Carg03972 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G76080.17.0e-10677.02chloroplastic drought-induced stress protein of 32 kD [more]
AT1G45145.17.6e-1231.53thioredoxin H-type 5 [more]
AT1G19730.12.2e-1133.93Thioredoxin superfamily protein [more]
AT5G42980.15.0e-1133.33thioredoxin 3 [more]
AT3G51030.12.5e-1030.56thioredoxin H-type 1 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 62..177
e-value: 4.5E-18
score: 67.1
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 178..292
e-value: 3.9E-19
score: 70.6
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 194..283
e-value: 3.3E-10
score: 39.9
coord: 75..168
e-value: 9.2E-10
score: 38.4
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 54..202
score: 10.721449
IPR044192Thioredoxin-like protein CDSP32PANTHERPTHR47578THIOREDOXIN-LIKE PROTEIN CDSP32, CHLOROPLASTICcoord: 1..298
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 64..171
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 178..285

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg03972-RACarg03972-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0042742 defense response to bacterium
biological_process GO:0010286 heat acclimation
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor