Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCGCGATTGATGAAACCATTCGGTTGGAGGAGAGAGGATCTAATCGGATCGAGGAGGAATCGGATCTGGAAGTCGGAGTTTCGTATTCCTCCAGTGGAGGTTTCTTCGGATTCGGATCGAGGCTATCTCGGAACAGTAGTGTTCGATGCCGATATGTATCGCTGCAAACGCCGCAGAACGACGAGGAAGTGAATCAGAGTTGGATGATGAAGAAGGTGAAGAGGTTCGAGGAGATTATAAAAGCTATGGCTAGGTCGAAGTGGAGAAGCTTCATTAACGGAATAGTTAACAAGAGACGCAGTGTGAGGTTTCAGTATGATCCGAGGAGTTATGCGCTGAACTTTGACCACGGGATCGGAGAAGACGGCGGCGGAGGTGGCCGCCATGGTTACAGTCCGCCGTCTGAACCGCCGATGGGATTGGGGATTCGGATGAGAAGCGAGATATGA
mRNA sequence
ATGGCGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCGCGATTGATGAAACCATTCGGTTGGAGGAGAGAGGATCTAATCGGATCGAGGAGGAATCGGATCTGGAAGTCGGAGTTTCGTATTCCTCCAGTGGAGGTTTCTTCGGATTCGGATCGAGGCTATCTCGGAACAGTAGTGTTCGATGCCGATATGTATCGCTGCAAACGCCGCAGAACGACGAGGAAGTGAATCAGAGTTGGATGATGAAGAAGGTGAAGAGGTTCGAGGAGATTATAAAAGCTATGGCTAGGTCGAAGTGGAGAAGCTTCATTAACGGAATAGTTAACAAGAGACGCAGTGTGAGGTTTCAGTATGATCCGAGGAGTTATGCGCTGAACTTTGACCACGGGATCGGAGAAGACGGCGGCGGAGGTGGCCGCCATGGTTACAGTCCGCCGTCTGAACCGCCGATGGGATTGGGGATTCGGATGAGAAGCGAGATATGA
Coding sequence (CDS)
ATGGCGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCGCGATTGATGAAACCATTCGGTTGGAGGAGAGAGGATCTAATCGGATCGAGGAGGAATCGGATCTGGAAGTCGGAGTTTCGTATTCCTCCAGTGGAGGTTTCTTCGGATTCGGATCGAGGCTATCTCGGAACAGTAGTGTTCGATGCCGATATGTATCGCTGCAAACGCCGCAGAACGACGAGGAAGTGAATCAGAGTTGGATGATGAAGAAGGTGAAGAGGTTCGAGGAGATTATAAAAGCTATGGCTAGGTCGAAGTGGAGAAGCTTCATTAACGGAATAGTTAACAAGAGACGCAGTGTGAGGTTTCAGTATGATCCGAGGAGTTATGCGCTGAACTTTGACCACGGGATCGGAGAAGACGGCGGCGGAGGTGGCCGCCATGGTTACAGTCCGCCGTCTGAACCGCCGATGGGATTGGGGATTCGGATGAGAAGCGAGATATGA
Protein sequence
MASSSSSSSSSSAIDETIRLEERGSNRIEEESDLEVGVSYSSSGGFFGFGSRLSRNSSVRCRYVSLQTPQNDEEVNQSWMMKKVKRFEEIIKAMARSKWRSFINGIVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMRSEI
Homology
BLAST of Carg03941 vs. NCBI nr
Match:
KAG7020402.1 (hypothetical protein SDJN02_17086, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 308.1 bits (788), Expect = 4.3e-80
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
Query: 1 MASSSSSSSSSSAIDETIRLEERGSNRIEEESDLEVGVSYSSSGGFFGFGSRLSRNSSVR 60
MASSSSSSSSSSAIDETIRLEERGSNRIEEESDLEVGVSYSSSGGFFGFGSRLSRNSSVR
Sbjct: 1 MASSSSSSSSSSAIDETIRLEERGSNRIEEESDLEVGVSYSSSGGFFGFGSRLSRNSSVR 60
Query: 61 CRYVSLQTPQNDEEVNQSWMMKKVKRFEEIIKAMARSKWRSFINGIVNKRRSVRFQYDPR 120
CRYVSLQTPQNDEEVNQSWMMKKVKRFEEIIKAMARSKWRSFINGIVNKRRSVRFQYDPR
Sbjct: 61 CRYVSLQTPQNDEEVNQSWMMKKVKRFEEIIKAMARSKWRSFINGIVNKRRSVRFQYDPR 120
Query: 121 SYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMRSEI 161
SYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMRSEI
Sbjct: 121 SYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMRSEI 160
BLAST of Carg03941 vs. NCBI nr
Match:
XP_023537514.1 (uncharacterized protein LOC111798530 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 287.3 bits (734), Expect = 7.9e-74
Identity = 149/156 (95.51%), Postives = 152/156 (97.44%), Query Frame = 0
Query: 6 SSSSSSSAIDETIRLEERGSNRIEEESDLEVGVSYSSSGGFFGFGSRLSRNSSVRCRYVS 65
+SSSSSSAIDET RLEERGSNRIEEESDLEVGVSYSS GGFFGFGSRLSR+SSVRCRYVS
Sbjct: 2 ASSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSCGGFFGFGSRLSRSSSVRCRYVS 61
Query: 66 LQTPQNDEEVNQSWMMKKVKRFEEIIKAMARSKWRSFINGIVNKRRSVRFQYDPRSYALN 125
LQT QNDEEVNQSWMMKKVKRFEEI+KAMARSKWRSFINGIVNKRRSVRFQYDPRSYALN
Sbjct: 62 LQTQQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPRSYALN 121
Query: 126 FDHGIGEDGGGGGRHGYSPPSEPPMGLGIRM-RSEI 161
FDHGIGEDGGGGGRHGYSPPSEPPMGLGIRM RSEI
Sbjct: 122 FDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI 157
BLAST of Carg03941 vs. NCBI nr
Match:
KAG6585486.1 (hypothetical protein SDJN03_18219, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 286.2 bits (731), Expect = 1.8e-73
Identity = 148/150 (98.67%), Postives = 149/150 (99.33%), Query Frame = 0
Query: 2 ASSSSSSSSSSAIDETIRLEERGSNRIEEESDLEVGVSYSSSGGFFGFGSRLSRNSSVRC 61
+SSSSSSSSSSAIDET RLEERGSNRIEEESDLEVGVSYSSSGGFFGFGSRLSRNSSVRC
Sbjct: 4 SSSSSSSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSSGGFFGFGSRLSRNSSVRC 63
Query: 62 RYVSLQTPQNDEEVNQSWMMKKVKRFEEIIKAMARSKWRSFINGIVNKRRSVRFQYDPRS 121
RYVSLQTPQNDEEVNQSWMMKKVKRFEEIIKAMARSKWRSFINGIVNKRRSVRFQYDPRS
Sbjct: 64 RYVSLQTPQNDEEVNQSWMMKKVKRFEEIIKAMARSKWRSFINGIVNKRRSVRFQYDPRS 123
Query: 122 YALNFDHGIGEDGGGGGRHGYSPPSEPPMG 152
YALNFDHGIGEDGGGGGRHGYSPPSEPPMG
Sbjct: 124 YALNFDHGIGEDGGGGGRHGYSPPSEPPMG 153
BLAST of Carg03941 vs. NCBI nr
Match:
XP_023002532.1 (uncharacterized protein LOC111496346 [Cucurbita maxima])
HSP 1 Score: 271.9 bits (694), Expect = 3.4e-69
Identity = 147/159 (92.45%), Postives = 150/159 (94.34%), Query Frame = 0
Query: 4 SSSSSSSSSAIDETIRLEERGSNRIEEESDLEVGVSYSSSGGFFGFGSRLSRNSSVRCRY 63
+SSSSSSSSAIDET RLEERGSNRIEEESDLEVGVSYSSSGGFF FGS LSR+SSVRCRY
Sbjct: 2 ASSSSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSSGGFFEFGSWLSRSSSVRCRY 61
Query: 64 VSLQTP-QNDEEVNQSWMMKKVKRFEEIIKAMARSKWRSFINGIVNKRRSVRFQYDPRSY 123
VSLQ QNDEEVNQSWMMKKVKRFEEII+AMARSKWRSFINGIVNKRRSVRFQYDPRSY
Sbjct: 62 VSLQAQRQNDEEVNQSWMMKKVKRFEEIIQAMARSKWRSFINGIVNKRRSVRFQYDPRSY 121
Query: 124 ALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRM-RSEI 161
ALNFDHGIGEDG GGGRHGYSPPSE PMGLGIRM RSEI
Sbjct: 122 ALNFDHGIGEDGSGGGRHGYSPPSESPMGLGIRMNRSEI 160
BLAST of Carg03941 vs. NCBI nr
Match:
XP_022131993.1 (uncharacterized protein LOC111004972 [Momordica charantia])
HSP 1 Score: 186.8 bits (473), Expect = 1.4e-43
Identity = 107/161 (66.46%), Postives = 131/161 (81.37%), Query Frame = 0
Query: 3 SSSSSSSSSSAIDETIRLEERGSNRIEEESDLEVGV-SYSSSGGFFGFGSRLSRNS-SVR 62
+S SSS+SSS+IDET+R ++RIEE+ D EVGV SYSS G FFGFGSR +R+S VR
Sbjct: 2 ASYSSSTSSSSIDETLR-----TDRIEEDDDREVGVSSYSSCGCFFGFGSRQARSSDGVR 61
Query: 63 CRYVSLQTPQNDEEVNQSWMMKKVKRFEEIIKAMARSKWRSFINGIVNKRRSVRFQYDPR 122
CRY+ LQ ++++V QSWMMKKVKRF+EIIKA+A KWRSFI+GI++K+RSVRFQYDPR
Sbjct: 62 CRYLPLQ--PHEDQVKQSWMMKKVKRFKEIIKAVAGRKWRSFISGIISKKRSVRFQYDPR 121
Query: 123 SYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRM-RSEI 161
SYALNFD G GEDGGG GRHG+ PS P+GLGI M RS++
Sbjct: 122 SYALNFDEGSGEDGGGSGRHGFRAPSATPIGLGIGMNRSQV 155
BLAST of Carg03941 vs. ExPASy TrEMBL
Match:
A0A6J1KJS5 (uncharacterized protein LOC111496346 OS=Cucurbita maxima OX=3661 GN=LOC111496346 PE=4 SV=1)
HSP 1 Score: 271.9 bits (694), Expect = 1.7e-69
Identity = 147/159 (92.45%), Postives = 150/159 (94.34%), Query Frame = 0
Query: 4 SSSSSSSSSAIDETIRLEERGSNRIEEESDLEVGVSYSSSGGFFGFGSRLSRNSSVRCRY 63
+SSSSSSSSAIDET RLEERGSNRIEEESDLEVGVSYSSSGGFF FGS LSR+SSVRCRY
Sbjct: 2 ASSSSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSSGGFFEFGSWLSRSSSVRCRY 61
Query: 64 VSLQTP-QNDEEVNQSWMMKKVKRFEEIIKAMARSKWRSFINGIVNKRRSVRFQYDPRSY 123
VSLQ QNDEEVNQSWMMKKVKRFEEII+AMARSKWRSFINGIVNKRRSVRFQYDPRSY
Sbjct: 62 VSLQAQRQNDEEVNQSWMMKKVKRFEEIIQAMARSKWRSFINGIVNKRRSVRFQYDPRSY 121
Query: 124 ALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRM-RSEI 161
ALNFDHGIGEDG GGGRHGYSPPSE PMGLGIRM RSEI
Sbjct: 122 ALNFDHGIGEDGSGGGRHGYSPPSESPMGLGIRMNRSEI 160
BLAST of Carg03941 vs. ExPASy TrEMBL
Match:
A0A6J1BV09 (uncharacterized protein LOC111004972 OS=Momordica charantia OX=3673 GN=LOC111004972 PE=4 SV=1)
HSP 1 Score: 186.8 bits (473), Expect = 7.0e-44
Identity = 107/161 (66.46%), Postives = 131/161 (81.37%), Query Frame = 0
Query: 3 SSSSSSSSSSAIDETIRLEERGSNRIEEESDLEVGV-SYSSSGGFFGFGSRLSRNS-SVR 62
+S SSS+SSS+IDET+R ++RIEE+ D EVGV SYSS G FFGFGSR +R+S VR
Sbjct: 2 ASYSSSTSSSSIDETLR-----TDRIEEDDDREVGVSSYSSCGCFFGFGSRQARSSDGVR 61
Query: 63 CRYVSLQTPQNDEEVNQSWMMKKVKRFEEIIKAMARSKWRSFINGIVNKRRSVRFQYDPR 122
CRY+ LQ ++++V QSWMMKKVKRF+EIIKA+A KWRSFI+GI++K+RSVRFQYDPR
Sbjct: 62 CRYLPLQ--PHEDQVKQSWMMKKVKRFKEIIKAVAGRKWRSFISGIISKKRSVRFQYDPR 121
Query: 123 SYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRM-RSEI 161
SYALNFD G GEDGGG GRHG+ PS P+GLGI M RS++
Sbjct: 122 SYALNFDEGSGEDGGGSGRHGFRAPSATPIGLGIGMNRSQV 155
BLAST of Carg03941 vs. ExPASy TrEMBL
Match:
A0A6J1K5B0 (uncharacterized protein LOC111492425 OS=Cucurbita maxima OX=3661 GN=LOC111492425 PE=4 SV=1)
HSP 1 Score: 181.8 bits (460), Expect = 2.3e-42
Identity = 103/150 (68.67%), Postives = 118/150 (78.67%), Query Frame = 0
Query: 8 SSSSSAIDETIRLEE-RGSNRIEEESDL-----EVGVSYSSSGGFFGFGSRLSRNSSVRC 67
+SS++ DE R EE R +RIEE +D EVGVSYSS G FFGFGSRLSR+SSVRC
Sbjct: 2 ASSATIEDEISRSEEIRAPDRIEEGNDRDLDLDEVGVSYSSCGCFFGFGSRLSRSSSVRC 61
Query: 68 RYVSLQTPQNDEEVNQSWMMKKVKRFEEIIKAMARSKWRSFINGIVNKRRSVRFQYDPRS 127
RY+ L + +EEV QSWMMKKVKRF++IIKAMA KWRSFINGIVNKRRSVRFQYDPRS
Sbjct: 62 RYLLL---RENEEVKQSWMMKKVKRFKDIIKAMAGRKWRSFINGIVNKRRSVRFQYDPRS 121
Query: 128 YALNFDHGIGEDGGGGGRHGYSPPSEPPMG 152
YALNFD G+GE+ GGGGRHG+ P P+G
Sbjct: 122 YALNFDEGMGEEEGGGGRHGFRQPFASPIG 148
BLAST of Carg03941 vs. ExPASy TrEMBL
Match:
A0A5A7VG87 (Stress induced protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002220 PE=4 SV=1)
HSP 1 Score: 156.0 bits (393), Expect = 1.3e-34
Identity = 104/161 (64.60%), Postives = 115/161 (71.43%), Query Frame = 0
Query: 1 MASSSSSSSSSSAIDETIRLEERGSNRIEEESDL---EV-GVSYSSSGGFFGFGSRLSRN 60
MASSSSSSSSSSAID T+R E+ +RIEE DL EV G SYSS G FFGFGSRLSR
Sbjct: 1 MASSSSSSSSSSAIDGTLRSED---DRIEEGEDLRDEEVGGFSYSSCGCFFGFGSRLSR- 60
Query: 61 SSVRCRYVSLQTPQNDEEV-NQSWMMKKVKRFEEIIKAMARSKWRSFINGIVNKRRSVRF 120
VR Y+ LQ+ + EEV QSWMM+KVKR EIIKAMA KWRS INGI+NKRRSVRF
Sbjct: 61 --VRGGYLPLQSNRKSEEVKQQSWMMRKVKRLNEIIKAMAGRKWRSLINGIINKRRSVRF 120
Query: 121 QYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRM 157
QYDPRSYALNFD G+ E+G S P+GLGI M
Sbjct: 121 QYDPRSYALNFDEGMEEEG---------RRSLQPIGLGIGM 146
BLAST of Carg03941 vs. ExPASy TrEMBL
Match:
A0A1S3BC68 (uncharacterized protein LOC103488331 OS=Cucumis melo OX=3656 GN=LOC103488331 PE=4 SV=1)
HSP 1 Score: 156.0 bits (393), Expect = 1.3e-34
Identity = 104/161 (64.60%), Postives = 115/161 (71.43%), Query Frame = 0
Query: 1 MASSSSSSSSSSAIDETIRLEERGSNRIEEESDL---EV-GVSYSSSGGFFGFGSRLSRN 60
MASSSSSSSSSSAID T+R E+ +RIEE DL EV G SYSS G FFGFGSRLSR
Sbjct: 1 MASSSSSSSSSSAIDGTLRSED---DRIEEGEDLRDEEVGGFSYSSCGCFFGFGSRLSR- 60
Query: 61 SSVRCRYVSLQTPQNDEEV-NQSWMMKKVKRFEEIIKAMARSKWRSFINGIVNKRRSVRF 120
VR Y+ LQ+ + EEV QSWMM+KVKR EIIKAMA KWRS INGI+NKRRSVRF
Sbjct: 61 --VRGGYLPLQSNRKSEEVKQQSWMMRKVKRLNEIIKAMAGRKWRSLINGIINKRRSVRF 120
Query: 121 QYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRM 157
QYDPRSYALNFD G+ E+G S P+GLGI M
Sbjct: 121 QYDPRSYALNFDEGMEEEG---------RRSLQPIGLGIGM 146
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7020402.1 | 4.3e-80 | 100.00 | hypothetical protein SDJN02_17086, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_023537514.1 | 7.9e-74 | 95.51 | uncharacterized protein LOC111798530 [Cucurbita pepo subsp. pepo] | [more] |
KAG6585486.1 | 1.8e-73 | 98.67 | hypothetical protein SDJN03_18219, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_023002532.1 | 3.4e-69 | 92.45 | uncharacterized protein LOC111496346 [Cucurbita maxima] | [more] |
XP_022131993.1 | 1.4e-43 | 66.46 | uncharacterized protein LOC111004972 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1KJS5 | 1.7e-69 | 92.45 | uncharacterized protein LOC111496346 OS=Cucurbita maxima OX=3661 GN=LOC111496346... | [more] |
A0A6J1BV09 | 7.0e-44 | 66.46 | uncharacterized protein LOC111004972 OS=Momordica charantia OX=3673 GN=LOC111004... | [more] |
A0A6J1K5B0 | 2.3e-42 | 68.67 | uncharacterized protein LOC111492425 OS=Cucurbita maxima OX=3661 GN=LOC111492425... | [more] |
A0A5A7VG87 | 1.3e-34 | 64.60 | Stress induced protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold8... | [more] |
A0A1S3BC68 | 1.3e-34 | 64.60 | uncharacterized protein LOC103488331 OS=Cucumis melo OX=3656 GN=LOC103488331 PE=... | [more] |
Match Name | E-value | Identity | Description | |