Carg03940 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03940
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	hydroxyproline O-arabinosyltransferase 1-like
Location	Carg_Chr12: 2110499 .. 2111544 (-)
RNA-Seq Expression	Carg03940
Synteny	Carg03940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCAGAAGATGGTTGCAATGGCTCGAAGATCTGAACTGGGCTGTATGGCCGACTGTTTATTTTGTGGAGTTTGTAACAATCCCAGCCGCCGCCCGCTCCAAGATCCAAATCTGCATCTTATTAATTGTATAATTCCAAGATGAAATTTATCTGGTCTGCCAATTTCTGCAGCGACGACTTCTCGGGAACATATAATTCTTCCGTCTCTGCTTTGAAGGGAATTGATATGGGCAAATTCATTTGAGTTGAGATTCGAATCGCGAAATGGGTTGCGGGAATTTGTTCTTCTTGGTTCTTGTAACCTTCTCCGTTGCCCTAATTACCTACAATATCATCATCTCTGCTAATGCCCCTCTCCAGCAAGAGCTTCCTGGTCCATCGAGATTTTCGTCTTCCATTACTATCGACCCTGTGATTAAGATGCCGGTGGATAGATCGAAGTCGTTTTCCTCCAAGCGACTGTTCCATACGGCCGTCACTTCCTCGGATTCGGTTTACAACACTTGGCAGTGTCGGATCATGTACTATTGGTTTAAGAAGTTCAAGGATGAACCTAATTCTGAGATGGGTGGTTTCACCAGGATCTTGCACTCGGGGAAGCCCGACAAGTATATGGATGAAATTCCCACGTTTGTTGCTCAGCCTCTGCCGGCGGGAATGGATCAGGTACTAATTTATATGGTGTTCTGTATGCTTTGAAGTTCTTAGGGGAAGGGTTTTTCTGTGATTCTGCGATTCTGTGATGTGCTATCTATGATTTTGTTTGTGCAGTCCACCTGTTTGATAAAATTCCCCTTAGGAAATCCCAAGCTAGTGTTGAAATTTTTTGATTGTTAACACCTCGGCTAGTGAAATAATGTCCAATGGGCAACAATTCTAATTGAATTCAGAATTTTCTATCTTGGATTTGTTTCCTAGAGCTGAAATTACCATCTATTAGCTGCTCATCTGTGGTTTGAAACTGTAACAGGGCTACATAGTCCTCAATAGACCGTGGGCGTTTGTGCAATGGCTTCAAAGTGCGGACATCAAGGAAGAGTAG

mRNA sequence

ATGGAGCAGAAGATGGTTGCAATGGCTCGAAGATCTGAACTGGGCTATTCGAATCGCGAAATGGGTTGCGGGAATTTGTTCTTCTTGGTTCTTGTAACCTTCTCCGTTGCCCTAATTACCTACAATATCATCATCTCTGCTAATGCCCCTCTCCAGCAAGAGCTTCCTGGTCCATCGAGATTTTCGTCTTCCATTACTATCGACCCTGTGATTAAGATGCCGGTGGATAGATCGAAGTCGTTTTCCTCCAAGCGACTGTTCCATACGGCCGTCACTTCCTCGGATTCGGTTTACAACACTTGGCAGTGTCGGATCATGTACTATTGGTTTAAGAAGTTCAAGGATGAACCTAATTCTGAGATGGGTGGTTTCACCAGGATCTTGCACTCGGGGAAGCCCGACAAGTATATGGATGAAATTCCCACGTTTGTTGCTCAGCCTCTGCCGGCGGGAATGGATCAGGGCTACATAGTCCTCAATAGACCGTGGGCGTTTGTGCAATGGCTTCAAAGTGCGGACATCAAGGAAGAGTAG

Coding sequence (CDS)

ATGGAGCAGAAGATGGTTGCAATGGCTCGAAGATCTGAACTGGGCTATTCGAATCGCGAAATGGGTTGCGGGAATTTGTTCTTCTTGGTTCTTGTAACCTTCTCCGTTGCCCTAATTACCTACAATATCATCATCTCTGCTAATGCCCCTCTCCAGCAAGAGCTTCCTGGTCCATCGAGATTTTCGTCTTCCATTACTATCGACCCTGTGATTAAGATGCCGGTGGATAGATCGAAGTCGTTTTCCTCCAAGCGACTGTTCCATACGGCCGTCACTTCCTCGGATTCGGTTTACAACACTTGGCAGTGTCGGATCATGTACTATTGGTTTAAGAAGTTCAAGGATGAACCTAATTCTGAGATGGGTGGTTTCACCAGGATCTTGCACTCGGGGAAGCCCGACAAGTATATGGATGAAATTCCCACGTTTGTTGCTCAGCCTCTGCCGGCGGGAATGGATCAGGGCTACATAGTCCTCAATAGACCGTGGGCGTTTGTGCAATGGCTTCAAAGTGCGGACATCAAGGAAGAGTAG

Protein sequence

MEQKMVAMARRSELGYSNREMGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKSFSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEIPTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE

Homology

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BLAST of Carg03940 vs. NCBI nr
Match: KAG7020401.1 (Hydroxyproline O-arabinosyltransferase 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 363.6 bits (932), Expect = 9.6e-97
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MEQKMVAMARRSELGYSNREMGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSR 60
           MEQKMVAMARRSELGYSNREMGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSR
Sbjct: 1   MEQKMVAMARRSELGYSNREMGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSR 60

Query: 61  FSSSITIDPVIKMPVDRSKSFSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSE 120
           FSSSITIDPVIKMPVDRSKSFSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSE
Sbjct: 61  FSSSITIDPVIKMPVDRSKSFSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSE 120

Query: 121 MGGFTRILHSGKPDKYMDEIPTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           MGGFTRILHSGKPDKYMDEIPTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE
Sbjct: 121 MGGFTRILHSGKPDKYMDEIPTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 177

[Close]

BLAST of Carg03940 vs. NCBI nr
Match: KAG6585485.1 (Hydroxyproline O-arabinosyltransferase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 324.3 bits (830), Expect = 6.4e-85
Identity = 156/157 (99.36%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS
Sbjct: 1   MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
           FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI
Sbjct: 61  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKE+
Sbjct: 121 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKED 157

[Close]

BLAST of Carg03940 vs. NCBI nr
Match: XP_022951448.1 (hydroxyproline O-arabinosyltransferase 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 319.7 bits (818), Expect = 1.6e-83
Identity = 154/157 (98.09%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MGCGNLFFLVLVTFSVALITYNIIISANAPL+QELPGPSRFSSSITIDPVIKMPVDRSKS
Sbjct: 1   MGCGNLFFLVLVTFSVALITYNIIISANAPLKQELPGPSRFSSSITIDPVIKMPVDRSKS 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI
Sbjct: 61  SSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKE+
Sbjct: 121 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKED 157

[Close]

BLAST of Carg03940 vs. NCBI nr
Match: XP_022951449.1 (hydroxyproline O-arabinosyltransferase 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 319.7 bits (818), Expect = 1.6e-83
Identity = 154/157 (98.09%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MGCGNLFFLVLVTFSVALITYNIIISANAPL+QELPGPSRFSSSITIDPVIKMPVDRSKS
Sbjct: 1   MGCGNLFFLVLVTFSVALITYNIIISANAPLKQELPGPSRFSSSITIDPVIKMPVDRSKS 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI
Sbjct: 61  SSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKE+
Sbjct: 121 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKED 157

[Close]

BLAST of Carg03940 vs. NCBI nr
Match: XP_023537512.1 (hydroxyproline O-arabinosyltransferase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.5 bits (807), Expect = 3.0e-82
Identity = 151/157 (96.18%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MGCGNLFFLVLVTFSVALITYNIIISANAPL+QELPGPSRFSSSIT+DPVIKMP DR KS
Sbjct: 1   MGCGNLFFLVLVTFSVALITYNIIISANAPLKQELPGPSRFSSSITVDPVIKMPADRLKS 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI
Sbjct: 61  SSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKE+
Sbjct: 121 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKED 157

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BLAST of Carg03940 vs. ExPASy Swiss-Prot
Match: Q8W4E6 (Hydroxyproline O-arabinosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=HPAT1 PE=1 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.3e-61
Identity = 119/163 (73.01%), Postives = 134/163 (82.21%), Query Frame = 0


Query: 21  MGC-GNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMP---VD 80
           MGC G LF+ +L+T SVALITYNIIISANAPL+Q  PG S  SS I+IDPVI++P     
Sbjct: 1   MGCGGTLFYPLLITLSVALITYNIIISANAPLKQGFPGRSS-SSDISIDPVIELPRGGGS 60

Query: 81  RSKSFSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDE--PNSEMGGFTRILHSGKPD 140
           R+      RLFHTAVT+SDSVYNTWQCR+MYYWFKK +    P SEMGGFTRILHSGKPD
Sbjct: 61  RNNDGKRIRLFHTAVTASDSVYNTWQCRVMYYWFKKIQASAGPGSEMGGFTRILHSGKPD 120

Query: 141 KYMDEIPTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           +YMDEIPTFVAQPLP+GMDQGY+VLNRPWAFVQWLQ  DIKE+
Sbjct: 121 QYMDEIPTFVAQPLPSGMDQGYVVLNRPWAFVQWLQQTDIKED 162

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BLAST of Carg03940 vs. ExPASy Swiss-Prot
Match: Q494Q2 (Hydroxyproline O-arabinosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=HPAT2 PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.8e-51
Identity = 96/155 (61.94%), Postives = 120/155 (77.42%), Query Frame = 0


Query: 24  GNLFFLVLVTFSVAL-ITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKSFS 83
           G  FF +L+T S+ L I YN I+S + PL+QELPG    SS   I   +K P     S  
Sbjct: 5   GKYFFPILMTLSLFLIIRYNYIVSDDPPLRQELPGRRSASSGDDITYTVKTP-----SKK 64

Query: 84  SKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEIPT 143
           +KRLFHTAVT++DSVY+TWQCR+MYYW+ +F+DEP S+MGG+TRILHSG+PD  MDEIPT
Sbjct: 65  TKRLFHTAVTATDSVYSTWQCRVMYYWYNRFRDEPGSDMGGYTRILHSGRPDGLMDEIPT 124

Query: 144 FVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           FVA PLP+G+D+GY+VLNRPWAFVQWLQ A I+E+
Sbjct: 125 FVADPLPSGVDKGYVVLNRPWAFVQWLQQAHIEED 154

[Close]

BLAST of Carg03940 vs. ExPASy Swiss-Prot
Match: Q9FY51 (Hydroxyproline O-arabinosyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=HPAT3 PE=1 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 5.4e-42
Identity = 82/157 (52.23%), Postives = 107/157 (68.15%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MG  +   L L+ F   ++TYN++      +     G S    S  +DPV++MP++  K+
Sbjct: 1   MGKASGLLLFLLGFGFFVVTYNLL----TLIVHNRSGVSNSDGSPLLDPVVQMPLNIRKA 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SS   FH A+T++D+ YN WQCRIMYYW+K+ K  P S+MGGFTRILHSG  D  MDEI
Sbjct: 61  KSSPAPFHVALTATDAPYNKWQCRIMYYWYKQKKALPGSDMGGFTRILHSGNSDNLMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFV  PLP G+D+GY+VLNRPWAFVQWL+ A IKE+
Sbjct: 121 PTFVVDPLPPGLDRGYVVLNRPWAFVQWLERATIKED 153

[Close]

BLAST of Carg03940 vs. ExPASy Swiss-Prot
Match: G7LG31 (Hydroxyproline O-arabinosyltransferase RDN2 OS=Medicago truncatula OX=3880 GN=RDN2 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 8.6e-40
Identity = 70/110 (63.64%), Postives = 88/110 (80.00%), Query Frame = 0


Query: 68  DPVIKMPVDRSKSFSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRI 127
           DP+++MP     + +SK  FH A+T++D++YN WQCRIMYYW+KK +  P SEMGGFTRI
Sbjct: 46  DPIVEMPEHVKNTKTSKAPFHIALTATDAIYNKWQCRIMYYWYKKQRSLPGSEMGGFTRI 105

Query: 128 LHSGKPDKYMDEIPTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           LHSGK D  MDEIPT V  PLP G+D+GY+VLNRPWAFVQWL+ A+I+EE
Sbjct: 106 LHSGKADNLMDEIPTVVVDPLPEGLDRGYVVLNRPWAFVQWLEKANIEEE 155

[Close]

BLAST of Carg03940 vs. ExPASy Swiss-Prot
Match: A0A0A1H7M6 (Hydroxyproline O-arabinosyltransferase PLENTY OS=Lotus japonicus OX=34305 GN=PLENTY PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 8.9e-37
Identity = 66/98 (67.35%), Postives = 80/98 (81.63%), Query Frame = 0


Query: 80  SFSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDE 139
           S S+   +H A+T++D+ Y+ WQCRIMYYW+KK KD P S MG FTRILHSG+ D+ MDE
Sbjct: 56  SASTNAKYHVALTATDAAYSQWQCRIMYYWYKKVKDMPGSNMGKFTRILHSGRTDQLMDE 115

Query: 140 IPTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           IPTFV  PLP G+D+GYIVLNRPWAFVQWL+ ADI+EE
Sbjct: 116 IPTFVVDPLPEGLDRGYIVLNRPWAFVQWLEKADIEEE 153

[Close]

BLAST of Carg03940 vs. ExPASy TrEMBL
Match: A0A6J1GIS2 (hydroxyproline O-arabinosyltransferase 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454262 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 7.7e-84
Identity = 154/157 (98.09%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MGCGNLFFLVLVTFSVALITYNIIISANAPL+QELPGPSRFSSSITIDPVIKMPVDRSKS
Sbjct: 1   MGCGNLFFLVLVTFSVALITYNIIISANAPLKQELPGPSRFSSSITIDPVIKMPVDRSKS 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI
Sbjct: 61  SSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKE+
Sbjct: 121 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKED 157

[Close]

BLAST of Carg03940 vs. ExPASy TrEMBL
Match: A0A6J1GHQ7 (hydroxyproline O-arabinosyltransferase 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454262 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 7.7e-84
Identity = 154/157 (98.09%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MGCGNLFFLVLVTFSVALITYNIIISANAPL+QELPGPSRFSSSITIDPVIKMPVDRSKS
Sbjct: 1   MGCGNLFFLVLVTFSVALITYNIIISANAPLKQELPGPSRFSSSITIDPVIKMPVDRSKS 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI
Sbjct: 61  SSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKE+
Sbjct: 121 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKED 157

[Close]

BLAST of Carg03940 vs. ExPASy TrEMBL
Match: A0A6J1KQC6 (hydroxyproline O-arabinosyltransferase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111496253 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 9.4e-82
Identity = 151/157 (96.18%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MGCGNLFFLVLVTFSVALITYNIIISANAPL+QELPGPSR SSSITIDPVIKMPVDR KS
Sbjct: 1   MGCGNLFFLVLVTFSVALITYNIIISANAPLKQELPGPSRSSSSITIDPVIKMPVDRLKS 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SSK+LFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI
Sbjct: 61  SSSKQLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKE+
Sbjct: 121 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKED 157

[Close]

BLAST of Carg03940 vs. ExPASy TrEMBL
Match: A0A5A7VF01 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002240 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.6e-79
Identity = 144/157 (91.72%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MGCGNLFFLVLVTFSVALITYNII+SANAPL+QELPGPSR SSSIT+DPVIKMP+DRS++
Sbjct: 1   MGCGNLFFLVLVTFSVALITYNIILSANAPLKQELPGPSRSSSSITVDPVIKMPLDRSET 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SSKRLFHTAVT+SDSVYNTWQCRIMYYWFKKFKD PNSEMGGFTRILHSGKPDKYMDEI
Sbjct: 61  SSSKRLFHTAVTASDSVYNTWQCRIMYYWFKKFKDGPNSEMGGFTRILHSGKPDKYMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFVAQPLPAGMD+GYIVLNRPWAFVQWLQ ADIKE+
Sbjct: 121 PTFVAQPLPAGMDRGYIVLNRPWAFVQWLQQADIKED 157

[Close]

BLAST of Carg03940 vs. ExPASy TrEMBL
Match: A0A0A0LQB9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382460 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.6e-79
Identity = 144/157 (91.72%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MGCGNLFFLVLVTFSVALITYNII+SANAPL+QELPGPSR SSSIT+DPVIKMP+DRS++
Sbjct: 1   MGCGNLFFLVLVTFSVALITYNIILSANAPLKQELPGPSRSSSSITVDPVIKMPLDRSET 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SSKRLFHTAVT+SDSVYNTWQCRIMYYWFKKFKD PNSEMGGFTRILHSGKPDKYMDEI
Sbjct: 61  SSSKRLFHTAVTASDSVYNTWQCRIMYYWFKKFKDGPNSEMGGFTRILHSGKPDKYMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFVAQPLPAGMD+GYIVLNRPWAFVQWLQ ADIKE+
Sbjct: 121 PTFVAQPLPAGMDRGYIVLNRPWAFVQWLQQADIKED 157

[Close]

BLAST of Carg03940 vs. TAIR 10
Match: AT5G25265.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: cultured cell, leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 236.5 bits (602), Expect = 1.6e-62
Identity = 119/163 (73.01%), Postives = 134/163 (82.21%), Query Frame = 0


Query: 21  MGC-GNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMP---VD 80
           MGC G LF+ +L+T SVALITYNIIISANAPL+Q  PG S  SS I+IDPVI++P     
Sbjct: 1   MGCGGTLFYPLLITLSVALITYNIIISANAPLKQGFPGRSS-SSDISIDPVIELPRGGGS 60

Query: 81  RSKSFSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDE--PNSEMGGFTRILHSGKPD 140
           R+      RLFHTAVT+SDSVYNTWQCR+MYYWFKK +    P SEMGGFTRILHSGKPD
Sbjct: 61  RNNDGKRIRLFHTAVTASDSVYNTWQCRVMYYWFKKIQASAGPGSEMGGFTRILHSGKPD 120

Query: 141 KYMDEIPTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           +YMDEIPTFVAQPLP+GMDQGY+VLNRPWAFVQWLQ  DIKE+
Sbjct: 121 QYMDEIPTFVAQPLPSGMDQGYVVLNRPWAFVQWLQQTDIKED 162

[Close]

BLAST of Carg03940 vs. TAIR 10
Match: AT2G25260.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 202.2 bits (513), Expect = 3.4e-52
Identity = 96/155 (61.94%), Postives = 120/155 (77.42%), Query Frame = 0


Query: 24  GNLFFLVLVTFSVAL-ITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKSFS 83
           G  FF +L+T S+ L I YN I+S + PL+QELPG    SS   I   +K P     S  
Sbjct: 5   GKYFFPILMTLSLFLIIRYNYIVSDDPPLRQELPGRRSASSGDDITYTVKTP-----SKK 64

Query: 84  SKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEIPT 143
           +KRLFHTAVT++DSVY+TWQCR+MYYW+ +F+DEP S+MGG+TRILHSG+PD  MDEIPT
Sbjct: 65  TKRLFHTAVTATDSVYSTWQCRVMYYWYNRFRDEPGSDMGGYTRILHSGRPDGLMDEIPT 124

Query: 144 FVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           FVA PLP+G+D+GY+VLNRPWAFVQWLQ A I+E+
Sbjct: 125 FVADPLPSGVDKGYVVLNRPWAFVQWLQQAHIEED 154

[Close]

BLAST of Carg03940 vs. TAIR 10
Match: AT5G13500.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 172.2 bits (435), Expect = 3.8e-43
Identity = 82/157 (52.23%), Postives = 107/157 (68.15%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MG  +   L L+ F   ++TYN++      +     G S    S  +DPV++MP++  K+
Sbjct: 1   MGKASGLLLFLLGFGFFVVTYNLL----TLIVHNRSGVSNSDGSPLLDPVVQMPLNIRKA 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SS   FH A+T++D+ YN WQCRIMYYW+K+ K  P S+MGGFTRILHSG  D  MDEI
Sbjct: 61  KSSPAPFHVALTATDAPYNKWQCRIMYYWYKQKKALPGSDMGGFTRILHSGNSDNLMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFV  PLP G+D+GY+VLNRPWAFVQWL+ A IKE+
Sbjct: 121 PTFVVDPLPPGLDRGYVVLNRPWAFVQWLERATIKED 153

[Close]

BLAST of Carg03940 vs. TAIR 10
Match: AT5G13500.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 228 Blast hits to 200 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 172.2 bits (435), Expect = 3.8e-43
Identity = 82/157 (52.23%), Postives = 107/157 (68.15%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MG  +   L L+ F   ++TYN++      +     G S    S  +DPV++MP++  K+
Sbjct: 1   MGKASGLLLFLLGFGFFVVTYNLL----TLIVHNRSGVSNSDGSPLLDPVVQMPLNIRKA 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SS   FH A+T++D+ YN WQCRIMYYW+K+ K  P S+MGGFTRILHSG  D  MDEI
Sbjct: 61  KSSPAPFHVALTATDAPYNKWQCRIMYYWYKQKKALPGSDMGGFTRILHSGNSDNLMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFV  PLP G+D+GY+VLNRPWAFVQWL+ A IKE+
Sbjct: 121 PTFVVDPLPPGLDRGYVVLNRPWAFVQWLERATIKED 153

[Close]

BLAST of Carg03940 vs. TAIR 10
Match: AT5G13500.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 172.2 bits (435), Expect = 3.8e-43
Identity = 82/157 (52.23%), Postives = 107/157 (68.15%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MG  +   L L+ F   ++TYN++      +     G S    S  +DPV++MP++  K+
Sbjct: 1   MGKASGLLLFLLGFGFFVVTYNLL----TLIVHNRSGVSNSDGSPLLDPVVQMPLNIRKA 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SS   FH A+T++D+ YN WQCRIMYYW+K+ K  P S+MGGFTRILHSG  D  MDEI
Sbjct: 61  KSSPAPFHVALTATDAPYNKWQCRIMYYWYKQKKALPGSDMGGFTRILHSGNSDNLMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFV  PLP G+D+GY+VLNRPWAFVQWL+ A IKE+
Sbjct: 121 PTFVVDPLPPGLDRGYVVLNRPWAFVQWLERATIKED 153

The following BLAST results are available for this feature:

BLAST of Carg03940 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020401.1	9.6e-97	100.00	Hydroxyproline O-arabinosyltransferase 1, partial [Cucurbita argyrosperma subsp....	[more]
KAG6585485.1	6.4e-85	99.36	Hydroxyproline O-arabinosyltransferase 1, partial [Cucurbita argyrosperma subsp....	[more]
XP_022951448.1	1.6e-83	98.09	hydroxyproline O-arabinosyltransferase 1-like isoform X1 [Cucurbita moschata]	[more]
XP_022951449.1	1.6e-83	98.09	hydroxyproline O-arabinosyltransferase 1-like isoform X2 [Cucurbita moschata]	[more]
XP_023537512.1	3.0e-82	96.18	hydroxyproline O-arabinosyltransferase 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg03940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W4E6	2.3e-61	73.01	Hydroxyproline O-arabinosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=HPAT...	[more]
Q494Q2	4.8e-51	61.94	Hydroxyproline O-arabinosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=HPAT...	[more]
Q9FY51	5.4e-42	52.23	Hydroxyproline O-arabinosyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=HPAT...	[more]
G7LG31	8.6e-40	63.64	Hydroxyproline O-arabinosyltransferase RDN2 OS=Medicago truncatula OX=3880 GN=RD...	[more]
A0A0A1H7M6	8.9e-37	67.35	Hydroxyproline O-arabinosyltransferase PLENTY OS=Lotus japonicus OX=34305 GN=PLE...	[more]

BLAST of Carg03940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GIS2	7.7e-84	98.09	hydroxyproline O-arabinosyltransferase 1-like isoform X2 OS=Cucurbita moschata O...	[more]
A0A6J1GHQ7	7.7e-84	98.09	hydroxyproline O-arabinosyltransferase 1-like isoform X1 OS=Cucurbita moschata O...	[more]
A0A6J1KQC6	9.4e-82	96.18	hydroxyproline O-arabinosyltransferase 1-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A5A7VF01	2.6e-79	91.72	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0LQB9	2.6e-79	91.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382460 PE=4 SV=1	[more]

BLAST of Carg03940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25265.1	1.6e-62	73.01	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G25260.1	3.4e-52	61.94	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G13500.1	3.8e-43	52.23	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G13500.2	3.8e-43	52.23	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G13500.3	3.8e-43	52.23	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31485:SF3	HYDROXYPROLINE O-ARABINOSYLTRANSFERASE 1	coord: 21..177
IPR044845	Glycosyltransferase HPAT/SRGT1-like	PANTHER	PTHR31485	PEPTIDYL SERINE ALPHA-GALACTOSYLTRANSFERASE	coord: 21..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03940-RA	Carg03940-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005801	cis-Golgi network
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:1990585	hydroxyproline O-arabinosyltransferase activity
molecular_function	GO:0016757	glycosyltransferase activity