Carg03782 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03782
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ribonuclease P protein subunit p29
Location	Carg_Chr14: 818097 .. 821774 (-)
RNA-Seq Expression	Carg03782
Synteny	Carg03782

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTAAACCCTATTTTCACACTTCCGCCACCGACGAATCGCCACCGCCCCTCCTCTCCTTCTCATCAATTTATTTATTTTACCGGTTCGAACAAGACTATTTCACGTTACAGCCCCTCCCTCCCAGAGTCCGCCGCTGCACCTCTCTCACCGCGCCGCTCGCTGCTCGCCGATCCTGCTGGACATCGTCTCAGCGGCTGTCGTCTCATCTTTTCCGACTCCAAGGTCTGTTTTATCTGGGCATGTTATGTTAGTTTGTACATACACATACTGAGAAGAAAATCAAGAGTGTTTGTTTAAGTTCTTCATCACTGTAAGTTCAATCAGTCTAAATGAAAATAGATGAAATAGAAAAAAAGAAAAAAAAAAAGCAGGTTGACTGGGTGCCGTTGTGTTTGCTTGAATAAAGAAGAAACTGAGTAATATAGAAGAAATTACTGGGAGGCAATCTGATTCCATTATTTTCTTACATGTCTAAATTCAAAATCCTTCAAATTCGACCAATTTCGAAAGAATGGAGTAGCTGTTATGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCACAACGATAGCCGAATAGCCACTATAGAAACAGCCCTGCGACAAATTTGAACTGCCATGTGCTACCCTCTGCCTTTTGATTTGTTGCATATTTAAGTCAATTGAGGCTTTGATAATCTGTATAACGCTTTGGTCTCTACGGAAAATTGGCTTGTCTCTAAGATCATGACTTTTCTGTCAACACAATTATCAATCAAAGTAGTGTTCATGGACCTCTACCTTTGTTTTCTTTGCATGTTTTTTCAAGTTCTATGTATTAAAAAAATCGTATATTGTTTCAGGAAGGGTTAATCAACTGCCCATGTCCAATGGCGGGCAATGTAGCTTCTCAAGATTTAAGGAAACACGCTTTGGAGGCATTGGAGCGGAGGTGTGCTGCTGCGAAAGTCGAACTTCTTCAACAACAGAAGAAGACTGGTTCTACAGAGAAATTAAAGAAAGAATTTAAGGGAAAAGCTACTTTGAACGACTCCTCTTCAACTGTTGTTTCGGGAAATCAGTATGATTCTTCAATTCTTTTGCCGTCTGAAGGGAAACCCTCAAATAAAGGTCCCCTCGTCGTAACTATGGTTTTGATATTTTCGTTTGCTGGGAAGGCAGTATGTTTTAGTTTGCTTATTATTAGTTGATTTCTTTCATGTGCAGATGTGAATGAAAGCGACCCTATATATTTCACCCTCTCAGCTGCTGTGAATGAAAATTTGATGTCTACAAATATGGATGTAAGTTGGCATCACCGAAAACTTAAAAGGGCCTTTCAACATTTATAACTTGGTTCTCTGTTTCTTAAAAATTAAGCTTATAAATGTTATTTCATCCACACATTTGTATGTCTGCATCCAGCTTTTTAAAAGCAATTTCAACATCTTAGCAAAATTTTGAAAACTGAAAAAGGTAGTTTTTAAAAATCTGTTTTTGAGATTTAGTTAAGAAATTAAACGTGGTATGAAAAAGATGAAAAAATACACTAAAAATTGTGAGGAAATAAGCATCATTTTTAAAACATTAAACTGAAAAAGGAAACTGTTTATCAAACGAGAACTAATAAAACTCATACTGAATCTCACGTCTTCTGTAGGTTTCAAGTAATAGAGGAAGAGTGGTTGATAAGATTTGTCACGAGCTAAGAACTAGCGGTTACATTAAGCGGTCAAGAGAATTGAAAGTTGATGCTTGGATCCTTCTTGATAACTTTGTTCCCAAACGTGCTGGAATGATTGGCTCTCGGAAGAGAGCTTTGCAGAGCAATTCAAAACGATCCAAAAGGCATATGTCCATGAAGCAACATAAAAAGTGTGGAACATTTGATCTGCCTTCTGATTTCCATAAGTGAGTTCCACTTTTCTCCTTGGTTTAGATCTCTCATCACCATCTCCTTGCCCCATTTTATCCCATATAGGATTGAATAAGAAAATGATGCTGAATATGTCTGTTTATCTTGAAATTAGAATTAGAATTTAGTAGTTGATCATTCATCAAAAAAGAAATTTGGAAGGTTATTGAGTAAAGTCATGTTTGTTGCACTCCATTGAATGTTACGCATGTTCTTGATAAGCATCCATTGAAATGAGTTTTCTTCGGCTGCCACGATCATTTATGTTTGACAATGGATTATTTTGTTTGGAAAAAGGCTGATGAAAGTGTCTAATTCTCCTGAAATTAGAATTAGAATCTATTTGTTGGTTGTTATCCATCAAAACAGGATTAAGAAGGTTATTCATCAAAAGGGAATTAGAATCAATAGAGTTCTAAGTTTGTTCTTCATAAGCATCCCATTGAAATGGGTTTTCTTTTGCTGTCACTATCATTTATGTTTGACAATAAATTATTGTGCTTTCTATTTCAGGTTTGAAATCTTTTGGCCAATGCACGATATGTGGAAAAGCTACATGAAACAACGGCTGTGCCATGTTGGGTTAGATTTTTACTTTTTGTTACATCAATGTTTCCGATATGTTATCTATGTCATTGGGTGATCAGAGTTTCAAATCTTGCAGGCCAGATACATTAGCTCGAAATCTTCTCGTCGCAGATCTTCATGGTGCCATGATCCTAGGTAAAACCATTCTTTTTTCCTAATTGAATTGTTTGCATTCATATCATATTTATATAAATTCCTTGTTCATCAAATAAACCAATTTTCATACCACGAAAGAGAGCACAAAAAACAAGACCCAACCAACAAGAAGGCTACAGAAAGAAACAAAACAAGAACAGTTAGAGAATTTTGTTGACAAGAACCATTAAAATGGTTCTGTAATAAGAGCATGAGGTTTCATACTAGTGTTTCTCTATCTCATATTGGCTATTTTATCATTTGATGATATCCACTGCAGTTGTTGAGTGTAAAATACCTGCTTTTACTGGAATAAGCGGCATCATGATTCGTGAAACTGCAGAAACATTTGGAATTTTTACTAAAGATGAGAAGTTTCGAGGTAACTCCTCCTTATGAATCTTAAATCTGTTGCATTTTCTGTGATCAAAACCAATTAAGTTCTATGAATTTGGGCAAGTTTTTCTAACAAATGACCTTGAATGTTTCTTTATTTGGTGGTTTTGATCTTGCAGTTGTGCCAAAGAAGTCTTCTGTGTTTATTTTCCAATGGGATTGTTGGAAAATTACCTTGCTCGGAGATAAACTCAGTTCAAGAATCCCCAGTTTGCCATCTAAAAATTGATTTCAGTCAATGATCTTCAATTATACAGTAATATTTACAGTGTACAGGTAATTCTCTGCTATTTAACCCATTAACAAAGGTTTTTTTTGGGGGGAGGGGGGGCTAAGTCAATAACAATTATTTATTTATCTTTTTTAAATTTTAAACTCAAATATAATATTTAATAGTTTTAATCATTAACTGTAGGAGTGGTGGTCCTTATGCAGAGCAAGATACAAGATCAACGAGAAGGGGTTGGTTCTCCATGTCCGGAGACCCAAACAGTAAGTGACACCGACACCCCAGATATTGGCATAAAGCCTACTTCGCATCTTCTTTCAATCAGAAGAATGAAGCCGCCGCGTTACACGGTGGTTCCGCCGTACGCGCTTCTCAGTCCACCGTGTCCTCTCCCTCCTCTCCCACGGTTCCTCCGCCG

mRNA sequence

TCTCTAAACCCTATTTTCACACTTCCGCCACCGACGAATCGCCACCGCCCCTCCTCTCCTTCTCATCAATTTATTTATTTTACCGGTTCGAACAAGACTATTTCACGTTACAGCCCCTCCCTCCCAGAGTCCGCCGCTGCACCTCTCTCACCGCGCCGCTCGCTGCTCGCCGATCCTGCTGGACATCGTCTCAGCGGCTGTCGTCTCATCTTTTCCGACTCCAAGGAAGGGTTAATCAACTGCCCATGTCCAATGGCGGGCAATGTAGCTTCTCAAGATTTAAGGAAACACGCTTTGGAGGCATTGGAGCGGAGGTGTGCTGCTGCGAAAGTCGAACTTCTTCAACAACAGAAGAAGACTGGTTCTACAGAGAAATTAAAGAAAGAATTTAAGGGAAAAGCTACTTTGAACGACTCCTCTTCAACTGTTGTTTCGGGAAATCAGTATGATTCTTCAATTCTTTTGCCGTCTGAAGGGAAACCCTCAAATAAAGATGTGAATGAAAGCGACCCTATATATTTCACCCTCTCAGCTGCTGTGAATGAAAATTTGATGTCTACAAATATGGATGTTTCAAGTAATAGAGGAAGAGTGGTTGATAAGATTTGTCACGAGCTAAGAACTAGCGGTTACATTAAGCGGTCAAGAGAATTGAAAGTTGATGCTTGGATCCTTCTTGATAACTTTGTTCCCAAACGTGCTGGAATGATTGGCTCTCGGAAGAGAGCTTTGCAGAGCAATTCAAAACGATCCAAAAGGCATATGTCCATGAAGCAACATAAAAAGTGTGGAACATTTGATCTGCCTTCTGATTTCCATAAGTTTGAAATCTTTTGGCCAATGCACGATATGTGGAAAAGCTACATGAAACAACGGCTGTGCCATGTTGGGCCAGATACATTAGCTCGAAATCTTCTCGTCGCAGATCTTCATGGTGCCATGATCCTAGTTGTTGAGTGTAAAATACCTGCTTTTACTGGAATAAGCGGCATCATGATTCGTGAAACTGCAGAAACATTTGGAATTTTTACTAAAGATGAGAAGTTTCGAGTTGTGCCAAAGAAGTCTTCTGTGTTTATTTTCCAATGGGATTGTTGGAAAATTACCTTGCTCGGAGATAAACTCAGTTCAAGAATCCCCAGTTTGCCATCTAAAAATTGATTTCAGTCAATGATCTTCAATTATACAGTAATATTTACAGTGTACAGCAAGATACAAGATCAACGAGAAGGGGTTGGTTCTCCATGTCCGGAGACCCAAACAGTAAGTGACACCGACACCCCAGATATTGGCATAAAGCCTACTTCGCATCTTCTTTCAATCAGAAGAATGAAGCCGCCGCGTTACACGGTGGTTCCGCCGTACGCGCTTCTCAGTCCACCGTGTCCTCTCCCTCCTCTCCCACGGTTCCTCCGCCG

Coding sequence (CDS)

TCTCTAAACCCTATTTTCACACTTCCGCCACCGACGAATCGCCACCGCCCCTCCTCTCCTTCTCATCAATTTATTTATTTTACCGGTTCGAACAAGACTATTTCACGTTACAGCCCCTCCCTCCCAGAGTCCGCCGCTGCACCTCTCTCACCGCGCCGCTCGCTGCTCGCCGATCCTGCTGGACATCGTCTCAGCGGCTGTCGTCTCATCTTTTCCGACTCCAAGGAAGGGTTAATCAACTGCCCATGTCCAATGGCGGGCAATGTAGCTTCTCAAGATTTAAGGAAACACGCTTTGGAGGCATTGGAGCGGAGGTGTGCTGCTGCGAAAGTCGAACTTCTTCAACAACAGAAGAAGACTGGTTCTACAGAGAAATTAAAGAAAGAATTTAAGGGAAAAGCTACTTTGAACGACTCCTCTTCAACTGTTGTTTCGGGAAATCAGTATGATTCTTCAATTCTTTTGCCGTCTGAAGGGAAACCCTCAAATAAAGATGTGAATGAAAGCGACCCTATATATTTCACCCTCTCAGCTGCTGTGAATGAAAATTTGATGTCTACAAATATGGATGTTTCAAGTAATAGAGGAAGAGTGGTTGATAAGATTTGTCACGAGCTAAGAACTAGCGGTTACATTAAGCGGTCAAGAGAATTGAAAGTTGATGCTTGGATCCTTCTTGATAACTTTGTTCCCAAACGTGCTGGAATGATTGGCTCTCGGAAGAGAGCTTTGCAGAGCAATTCAAAACGATCCAAAAGGCATATGTCCATGAAGCAACATAAAAAGTGTGGAACATTTGATCTGCCTTCTGATTTCCATAAGTTTGAAATCTTTTGGCCAATGCACGATATGTGGAAAAGCTACATGAAACAACGGCTGTGCCATGTTGGGCCAGATACATTAGCTCGAAATCTTCTCGTCGCAGATCTTCATGGTGCCATGATCCTAGTTGTTGAGTGTAAAATACCTGCTTTTACTGGAATAAGCGGCATCATGATTCGTGAAACTGCAGAAACATTTGGAATTTTTACTAAAGATGAGAAGTTTCGAGTTGTGCCAAAGAAGTCTTCTGTGTTTATTTTCCAATGGGATTGTTGGAAAATTACCTTGCTCGGAGATAAACTCAGTTCAAGAATCCCCAGTTTGCCATCTAAAAATTGA

Protein sequence

SLNPIFTLPPPTNRHRPSSPSHQFIYFTGSNKTISRYSPSLPESAAAPLSPRRSLLADPAGHRLSGCRLIFSDSKEGLINCPCPMAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVVSGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMSTNMDVSSNRGRVVDKICHELRTSGYIKRSRELKVDAWILLDNFVPKRAGMIGSRKRALQSNSKRSKRHMSMKQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMILVVECKIPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSRIPSLPSKN

Homology

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BLAST of Carg03782 vs. NCBI nr
Match: KAG7017346.1 (Ribonuclease P protein subunit p29, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 772.3 bits (1993), Expect = 1.9e-219
Identity = 386/386 (100.00%), Postives = 386/386 (100.00%), Query Frame = 0


Query: 1   SLNPIFTLPPPTNRHRPSSPSHQFIYFTGSNKTISRYSPSLPESAAAPLSPRRSLLADPA 60
           SLNPIFTLPPPTNRHRPSSPSHQFIYFTGSNKTISRYSPSLPESAAAPLSPRRSLLADPA
Sbjct: 1   SLNPIFTLPPPTNRHRPSSPSHQFIYFTGSNKTISRYSPSLPESAAAPLSPRRSLLADPA 60

Query: 61  GHRLSGCRLIFSDSKEGLINCPCPMAGNVASQDLRKHALEALERRCAAAKVELLQQQKKT 120
           GHRLSGCRLIFSDSKEGLINCPCPMAGNVASQDLRKHALEALERRCAAAKVELLQQQKKT
Sbjct: 61  GHRLSGCRLIFSDSKEGLINCPCPMAGNVASQDLRKHALEALERRCAAAKVELLQQQKKT 120

Query: 121 GSTEKLKKEFKGKATLNDSSSTVVSGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAV 180
           GSTEKLKKEFKGKATLNDSSSTVVSGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAV
Sbjct: 121 GSTEKLKKEFKGKATLNDSSSTVVSGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAV 180

Query: 181 NENLMSTNMDVSSNRGRVVDKICHELRTSGYIKRSRELKVDAWILLDNFVPKRAGMIGSR 240
           NENLMSTNMDVSSNRGRVVDKICHELRTSGYIKRSRELKVDAWILLDNFVPKRAGMIGSR
Sbjct: 181 NENLMSTNMDVSSNRGRVVDKICHELRTSGYIKRSRELKVDAWILLDNFVPKRAGMIGSR 240

Query: 241 KRALQSNSKRSKRHMSMKQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDT 300
           KRALQSNSKRSKRHMSMKQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDT
Sbjct: 241 KRALQSNSKRSKRHMSMKQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDT 300

Query: 301 LARNLLVADLHGAMILVVECKIPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFI 360
           LARNLLVADLHGAMILVVECKIPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFI
Sbjct: 301 LARNLLVADLHGAMILVVECKIPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFI 360

Query: 361 FQWDCWKITLLGDKLSSRIPSLPSKN 387
           FQWDCWKITLLGDKLSSRIPSLPSKN
Sbjct: 361 FQWDCWKITLLGDKLSSRIPSLPSKN 386

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BLAST of Carg03782 vs. NCBI nr
Match: KAG6580591.1 (Beta-1,4-xylosyltransferase IRX9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 698.7 bits (1802), Expect = 2.7e-197
Identity = 356/379 (93.93%), Postives = 361/379 (95.25%), Query Frame = 0


Query: 9   PPPTNRHRPSSPSHQFIYFTGSNKTISRY-SPSLPESAAAPLSPRRSLLADPAGHRLSGC 68
           PPP  +  P      F +     +T+S + SPSLPESAAAPLSPRRSLLADPAGHRLSGC
Sbjct: 325 PPPIQQLPPVHEKEDFGF-----RTVSEWVSPSLPESAAAPLSPRRSLLADPAGHRLSGC 384

Query: 69  RLIFSDSKEGLINCPCPMAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLK 128
           RLIFSDSKEGLINCPCPMAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLK
Sbjct: 385 RLIFSDSKEGLINCPCPMAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLK 444

Query: 129 KEFKGKATLNDSSSTVVSGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMST 188
           KEFKGKATLNDSSSTVVSGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMST
Sbjct: 445 KEFKGKATLNDSSSTVVSGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMST 504

Query: 189 NMDVSSNRGRVVDKICHELRTSGYIKRSRELKVDAWILLDNFVPKRAGMIGSRKRALQSN 248
           NMDVSSNRGRVVDKICHELRTSGYIKRSRELKVDAWILLDNFVPKRAGMIGSRKRALQSN
Sbjct: 505 NMDVSSNRGRVVDKICHELRTSGYIKRSRELKVDAWILLDNFVPKRAGMIGSRKRALQSN 564

Query: 249 SKRSKRHMSMKQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLV 308
           SKRSKRHMSMKQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLV
Sbjct: 565 SKRSKRHMSMKQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLV 624

Query: 309 ADLHGAMILVVECKIPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWK 368
           ADLHGAMILVVECKIPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWK
Sbjct: 625 ADLHGAMILVVECKIPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWK 684

Query: 369 ITLLGDKLSSRIPSLPSKN 387
           ITLLGDKLSSRIPSLPSKN
Sbjct: 685 ITLLGDKLSSRIPSLPSKN 698

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BLAST of Carg03782 vs. NCBI nr
Match: XP_023526523.1 (ribonuclease P protein subunit p29 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 593.2 bits (1528), Expect = 1.6e-165
Identity = 298/302 (98.68%), Postives = 300/302 (99.34%), Query Frame = 0


Query: 85  MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 144
           MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV
Sbjct: 1   MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 60

Query: 145 SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMSTNMDVSSNRGRVVDKICH 204
           SGN YDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMSTNMDVSS+RGRVVDKICH
Sbjct: 61  SGNHYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMSTNMDVSSDRGRVVDKICH 120

Query: 205 ELRTSGYIKRSRELKVDAWILLDNFVPKRAGMIGSRKRALQSNSKRSKRHMSMKQHKKCG 264
           ELRTSGYIKRSRELKVDAWILLDNFVPKRAGMIGSRKRALQSNSKRSKRHMSMKQHKKCG
Sbjct: 121 ELRTSGYIKRSRELKVDAWILLDNFVPKRAGMIGSRKRALQSNSKRSKRHMSMKQHKKCG 180

Query: 265 TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMILVVECKIPA 324
           TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMILVVECKIPA
Sbjct: 181 TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMILVVECKIPA 240

Query: 325 FTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSRIPSLPS 384
           FTGISGIMIRETAETFGI TKD+KFRVVPKKSSVFIFQWDCWKITLLGDKLSSRIPSLPS
Sbjct: 241 FTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKITLLGDKLSSRIPSLPS 300

Query: 385 KN 387
           KN
Sbjct: 301 KN 302

[Close]

BLAST of Carg03782 vs. NCBI nr
Match: XP_022934539.1 (ribonuclease P protein subunit p29 [Cucurbita moschata])

HSP 1 Score: 592.0 bits (1525), Expect = 3.6e-165
Identity = 298/302 (98.68%), Postives = 299/302 (99.01%), Query Frame = 0


Query: 85  MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 144
           MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV
Sbjct: 1   MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 60

Query: 145 SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMSTNMDVSSNRGRVVDKICH 204
           SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLM TNMDVSSNRGRVVDKICH
Sbjct: 61  SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMFTNMDVSSNRGRVVDKICH 120

Query: 205 ELRTSGYIKRSRELKVDAWILLDNFVPKRAGMIGSRKRALQSNSKRSKRHMSMKQHKKCG 264
           ELRTSGYIKRSRELKVDAWILLDNFVPKRA MIGSRKRALQS+SKRSKRHMSMKQHKKCG
Sbjct: 121 ELRTSGYIKRSRELKVDAWILLDNFVPKRAEMIGSRKRALQSSSKRSKRHMSMKQHKKCG 180

Query: 265 TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMILVVECKIPA 324
           TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLV DLHGAMILVVECKIPA
Sbjct: 181 TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVVDLHGAMILVVECKIPA 240

Query: 325 FTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSRIPSLPS 384
           FTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSRIPSLPS
Sbjct: 241 FTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSRIPSLPS 300

Query: 385 KN 387
           KN
Sbjct: 301 KN 302

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BLAST of Carg03782 vs. NCBI nr
Match: XP_022983897.1 (uncharacterized protein LOC111482383 [Cucurbita maxima] >XP_022983898.1 uncharacterized protein LOC111482383 [Cucurbita maxima] >XP_022983899.1 uncharacterized protein LOC111482383 [Cucurbita maxima])

HSP 1 Score: 590.1 bits (1520), Expect = 1.4e-164
Identity = 296/302 (98.01%), Postives = 299/302 (99.01%), Query Frame = 0


Query: 85  MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 144
           MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSS+VV
Sbjct: 1   MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSSVV 60

Query: 145 SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMSTNMDVSSNRGRVVDKICH 204
           SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMSTNMDVSSNRGRVVDKICH
Sbjct: 61  SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMSTNMDVSSNRGRVVDKICH 120

Query: 205 ELRTSGYIKRSRELKVDAWILLDNFVPKRAGMIGSRKRALQSNSKRSKRHMSMKQHKKCG 264
           +LRTSGYIKRSRELKVDAWILLDNFVPKRAG IGSRKRALQSNSKRSKRHMSMKQHKKCG
Sbjct: 121 KLRTSGYIKRSRELKVDAWILLDNFVPKRAGKIGSRKRALQSNSKRSKRHMSMKQHKKCG 180

Query: 265 TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMILVVECKIPA 324
           TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMILVVECKIPA
Sbjct: 181 TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMILVVECKIPA 240

Query: 325 FTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSRIPSLPS 384
           FTGISGIMIRETAETFGI TKD+KFRVVPKKSS FIFQWDCWKITLLGDKLSSRIPSLPS
Sbjct: 241 FTGISGIMIRETAETFGIVTKDDKFRVVPKKSSAFIFQWDCWKITLLGDKLSSRIPSLPS 300

Query: 385 KN 387
           KN
Sbjct: 301 KN 302

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BLAST of Carg03782 vs. ExPASy Swiss-Prot
Match: Q9ZW76 (Ribonuclease MRP protein subunit POP4 OS=Arabidopsis thaliana OX=3702 GN=POP4 PE=2 SV=2)

HSP 1 Score: 247.3 bits (630), Expect = 2.9e-64
Identity = 145/302 (48.01%), Postives = 189/302 (62.58%), Query Frame = 0


Query: 85  MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 144
           M       D  + A+ A+ERR A AK +LLQQQ+        +K  K K   +D   ++ 
Sbjct: 1   MGTETVVHDQARWAMAAMERRLAVAKAQLLQQQQ--------QKNEKDKKGTSDVDVSMK 60

Query: 145 SGNQYDSSILLPSEGKPSNKDVNESDP---IYFTLSAAVNENLMSTNMDVSSNRGRVVDK 204
             +Q DS   LP+  K S K V+  D     Y  LS  V+ENL++TN+  SS +G +VDK
Sbjct: 61  ESHQADS---LPTPSKTSIKKVDPKDDDSVAYTKLSHPVDENLLATNVKFSSAKGTIVDK 120

Query: 205 ICHELRTSG-----YIKRSRELKVDAWILLDNFVPKRAGMIGSRKRALQSNSKRSKRHMS 264
           + H L  SG     Y++ ++ +K+D +ILLDNFV  R+   GS K+A Q +SKRSK  MS
Sbjct: 121 VLHNLLRSGDSAQKYLQGTKSVKLDNYILLDNFVQSRSSASGS-KKASQKDSKRSKSRMS 180

Query: 265 MKQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMIL 324
           MK+ KK G   +P D  KF++F PMH MW+SYM + +   G   L+  LL ADLHGA + 
Sbjct: 181 MKRLKKSGALHIPKDLQKFDLFKPMHGMWESYMMKLIKVTGKIQLSLTLLSADLHGAFMF 240

Query: 325 VVECKIPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLS 379
           V ECKI +FTG+ GIM+RET+ETFGI T+D+KFRVVPKK SVFI Q DCWKITL GDK  
Sbjct: 241 VAECKIASFTGVQGIMVRETSETFGIITRDDKFRVVPKKLSVFIIQLDCWKITLHGDKFI 290

[Close]

BLAST of Carg03782 vs. ExPASy Swiss-Prot
Match: Q5M882 (Ribonuclease P protein subunit p29 OS=Rattus norvegicus OX=10116 GN=Pop4 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.8e-19
Identity = 46/141 (32.62%), Postives = 82/141 (58.16%), Query Frame = 0


Query: 249 KRSKRHMSMKQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDT----LARN 308
           K+  + +S KQ ++   FD+  +  ++ +F P+H++WK Y++     + PDT    +   
Sbjct: 71  KKKSKGLSAKQRRELRLFDIKPEQQRYSLFLPLHELWKQYIRDLCNGLKPDTQPQMIQAK 130

Query: 309 LLVADLHGAMILVVECKIPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWD 368
           LL ADLHGA+I V + K P++ G++GI+++ET   F I TK++  +V+PK++ VF  + D
Sbjct: 131 LLKADLHGAVISVTKSKCPSYVGVTGILLQETKHVFKIITKEDHLKVIPKQNCVFTIEID 190

Query: 369 CWKITLLGDKLSSRIPSLPSK 386
            +   + G K   R     +K
Sbjct: 191 DFISYIYGSKFQLRASERSAK 211

[Close]

BLAST of Carg03782 vs. ExPASy Swiss-Prot
Match: Q2KIB9 (Ribonuclease P protein subunit p29 OS=Bos taurus OX=9913 GN=POP4 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.7e-19
Identity = 46/157 (29.30%), Postives = 90/157 (57.32%), Query Frame = 0


Query: 226 LDNFVPKRAGMIGSRKRALQSNSKRSKRHMSMKQHKKCGTFDLPSDFHKFEIFWPMHDMW 285
           L++ + ++A ++       Q   ++  + +S KQ ++   FD+  +  ++ +F P+H++W
Sbjct: 47  LEDHLQRKAVVLEYFTHRKQKEKRKKSKGLSAKQRRELRLFDIKPEQQRYSLFLPLHELW 106

Query: 286 KSYMKQRLCHVGPDT----LARNLLVADLHGAMILVVECKIPAFTGISGIMIRETAETFG 345
           K Y++     + PDT    +   LL ADLHGA++ V + K P++ G++GI+++ET   F 
Sbjct: 107 KQYIRDLCNGLKPDTQPQMIQAKLLKADLHGAIVSVTKSKCPSYVGVTGILLQETKHVFK 166

Query: 346 IFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSR 379
           I TK+++ +V+PK + VF  + D +   + G K   R
Sbjct: 167 IITKEDRLKVIPKLNCVFTVEIDGFISYIYGSKFQLR 203

[Close]

BLAST of Carg03782 vs. ExPASy Swiss-Prot
Match: O95707 (Ribonuclease P protein subunit p29 OS=Homo sapiens OX=9606 GN=POP4 PE=1 SV=2)

HSP 1 Score: 96.7 bits (239), Expect = 6.2e-19
Identity = 46/141 (32.62%), Postives = 82/141 (58.16%), Query Frame = 0


Query: 242 RALQSNSKRSKRHMSMKQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDT- 301
           R  +   K+  + +S +Q ++   FD+  +  ++ +F P+H++WK Y++     + PDT 
Sbjct: 63  RHKRKEKKKKAKGLSARQRRELRLFDIKPEQQRYSLFLPLHELWKQYIRDLCSGLKPDTQ 122

Query: 302 ---LARNLLVADLHGAMILVVECKIPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSS 361
              +   LL ADLHGA+I V + K P++ GI+GI+++ET   F I TK+++ +V+PK + 
Sbjct: 123 PQMIQAKLLKADLHGAIISVTKSKCPSYVGITGILLQETKHIFKIITKEDRLKVIPKLNC 182

Query: 362 VFIFQWDCWKITLLGDKLSSR 379
           VF  + D +   + G K   R
Sbjct: 183 VFTVETDGFISYIYGSKFQLR 203

[Close]

BLAST of Carg03782 vs. ExPASy Swiss-Prot
Match: Q5R7B0 (Ribonuclease P protein subunit p29 OS=Pongo abelii OX=9601 GN=POP4 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.4e-18
Identity = 46/141 (32.62%), Postives = 82/141 (58.16%), Query Frame = 0


Query: 242 RALQSNSKRSKRHMSMKQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDT- 301
           R  +   K+  + +S +Q ++   FD+  +  ++ +F P+H++WK Y++     + PDT 
Sbjct: 63  RHKRKEKKKKAKGLSARQRRELRLFDIKPEQQRYSLFLPLHELWKQYIRDLCNGLKPDTQ 122

Query: 302 ---LARNLLVADLHGAMILVVECKIPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSS 361
              +   LL ADLHGA+I V + K P++ GI+GI+++ET   F I TK+++ +V+PK + 
Sbjct: 123 PQMIQAKLLKADLHGAIISVTKSKCPSYVGITGILLQETKHIFKIITKEDRLKVIPKLNC 182

Query: 362 VFIFQWDCWKITLLGDKLSSR 379
           VF  + D +   + G K   R
Sbjct: 183 VFTVEIDGFISYIYGSKFQLR 203

[Close]

BLAST of Carg03782 vs. ExPASy TrEMBL
Match: A0A6J1F2W6 (ribonuclease P protein subunit p29 OS=Cucurbita moschata OX=3662 GN=LOC111441684 PE=3 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 1.7e-165
Identity = 298/302 (98.68%), Postives = 299/302 (99.01%), Query Frame = 0


Query: 85  MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 144
           MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV
Sbjct: 1   MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 60

Query: 145 SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMSTNMDVSSNRGRVVDKICH 204
           SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLM TNMDVSSNRGRVVDKICH
Sbjct: 61  SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMFTNMDVSSNRGRVVDKICH 120

Query: 205 ELRTSGYIKRSRELKVDAWILLDNFVPKRAGMIGSRKRALQSNSKRSKRHMSMKQHKKCG 264
           ELRTSGYIKRSRELKVDAWILLDNFVPKRA MIGSRKRALQS+SKRSKRHMSMKQHKKCG
Sbjct: 121 ELRTSGYIKRSRELKVDAWILLDNFVPKRAEMIGSRKRALQSSSKRSKRHMSMKQHKKCG 180

Query: 265 TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMILVVECKIPA 324
           TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLV DLHGAMILVVECKIPA
Sbjct: 181 TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVVDLHGAMILVVECKIPA 240

Query: 325 FTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSRIPSLPS 384
           FTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSRIPSLPS
Sbjct: 241 FTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSRIPSLPS 300

Query: 385 KN 387
           KN
Sbjct: 301 KN 302

[Close]

BLAST of Carg03782 vs. ExPASy TrEMBL
Match: A0A6J1J0L0 (uncharacterized protein LOC111482383 OS=Cucurbita maxima OX=3661 GN=LOC111482383 PE=3 SV=1)

HSP 1 Score: 590.1 bits (1520), Expect = 6.6e-165
Identity = 296/302 (98.01%), Postives = 299/302 (99.01%), Query Frame = 0


Query: 85  MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 144
           MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSS+VV
Sbjct: 1   MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSSVV 60

Query: 145 SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMSTNMDVSSNRGRVVDKICH 204
           SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMSTNMDVSSNRGRVVDKICH
Sbjct: 61  SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMSTNMDVSSNRGRVVDKICH 120

Query: 205 ELRTSGYIKRSRELKVDAWILLDNFVPKRAGMIGSRKRALQSNSKRSKRHMSMKQHKKCG 264
           +LRTSGYIKRSRELKVDAWILLDNFVPKRAG IGSRKRALQSNSKRSKRHMSMKQHKKCG
Sbjct: 121 KLRTSGYIKRSRELKVDAWILLDNFVPKRAGKIGSRKRALQSNSKRSKRHMSMKQHKKCG 180

Query: 265 TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMILVVECKIPA 324
           TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMILVVECKIPA
Sbjct: 181 TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMILVVECKIPA 240

Query: 325 FTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSRIPSLPS 384
           FTGISGIMIRETAETFGI TKD+KFRVVPKKSS FIFQWDCWKITLLGDKLSSRIPSLPS
Sbjct: 241 FTGISGIMIRETAETFGIVTKDDKFRVVPKKSSAFIFQWDCWKITLLGDKLSSRIPSLPS 300

Query: 385 KN 387
           KN
Sbjct: 301 KN 302

[Close]

BLAST of Carg03782 vs. ExPASy TrEMBL
Match: A0A1S3B674 (Ribonuclease P protein subunit p29 OS=Cucumis melo OX=3656 GN=LOC103486457 PE=3 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 8.7e-141
Identity = 262/312 (83.97%), Postives = 281/312 (90.06%), Query Frame = 0


Query: 75  KEGLINCPCPMAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKA 134
           +EGLIN    M+   ASQDLRKHALEALERRCAAAKVELLQQQ K  STEK KKE KGK+
Sbjct: 4   QEGLINQQISMSDKKASQDLRKHALEALERRCAAAKVELLQQQ-KISSTEKSKKEVKGKS 63

Query: 135 TLNDSSSTVVSGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMSTNMDVSSN 194
           +LND +S VVS NQY+SSI LPSEGKP NKDVNESDPIYFTLSAAVNE LM+++MDVS N
Sbjct: 64  SLNDPTS-VVSRNQYNSSITLPSEGKPPNKDVNESDPIYFTLSAAVNEKLMASSMDVSKN 123

Query: 195 RGRVVDKICHELRTSGYIKRSRELKVDAWILLDNFVPKRAGMIGSRKRALQSNSKRSKRH 254
           RGRVVDKICHEL+ SGY+KRS+ELKVDA ILLDNFVPKRAGMIGSR R L+S SKRSKRH
Sbjct: 124 RGRVVDKICHELKNSGYMKRSKELKVDASILLDNFVPKRAGMIGSRMRDLRSISKRSKRH 183

Query: 255 MSMKQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAM 314
           MSMKQHKKCGTFDLPSD HK+EIFWPMHDMWKSYMKQRL +VGPD LARNLL+ADLHGAM
Sbjct: 184 MSMKQHKKCGTFDLPSDCHKYEIFWPMHDMWKSYMKQRLHNVGPDALARNLLIADLHGAM 243

Query: 315 ILVVECKIPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDK 374
           I VVECKIPAFTG SG+MIRETAETFGI TKD+KFRVVPKKSSVFIFQWDCWK+TLLGDK
Sbjct: 244 IRVVECKIPAFTGTSGVMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDK 303

Query: 375 LSSRIPSLPSKN 387
           LSSRIPSLPS N
Sbjct: 304 LSSRIPSLPSSN 313

[Close]

BLAST of Carg03782 vs. ExPASy TrEMBL
Match: A0A1S3B6Y6 (uncharacterized protein LOC103486457 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486457 PE=3 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 2.4e-138
Identity = 257/302 (85.10%), Postives = 275/302 (91.06%), Query Frame = 0


Query: 85  MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 144
           M+   ASQDLRKHALEALERRCAAAKVELLQQQ K  STEK KKE KGK++LND +S VV
Sbjct: 1   MSDKKASQDLRKHALEALERRCAAAKVELLQQQ-KISSTEKSKKEVKGKSSLNDPTS-VV 60

Query: 145 SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMSTNMDVSSNRGRVVDKICH 204
           S NQY+SSI LPSEGKP NKDVNESDPIYFTLSAAVNE LM+++MDVS NRGRVVDKICH
Sbjct: 61  SRNQYNSSITLPSEGKPPNKDVNESDPIYFTLSAAVNEKLMASSMDVSKNRGRVVDKICH 120

Query: 205 ELRTSGYIKRSRELKVDAWILLDNFVPKRAGMIGSRKRALQSNSKRSKRHMSMKQHKKCG 264
           EL+ SGY+KRS+ELKVDA ILLDNFVPKRAGMIGSR R L+S SKRSKRHMSMKQHKKCG
Sbjct: 121 ELKNSGYMKRSKELKVDASILLDNFVPKRAGMIGSRMRDLRSISKRSKRHMSMKQHKKCG 180

Query: 265 TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMILVVECKIPA 324
           TFDLPSD HK+EIFWPMHDMWKSYMKQRL +VGPD LARNLL+ADLHGAMI VVECKIPA
Sbjct: 181 TFDLPSDCHKYEIFWPMHDMWKSYMKQRLHNVGPDALARNLLIADLHGAMIRVVECKIPA 240

Query: 325 FTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSRIPSLPS 384
           FTG SG+MIRETAETFGI TKD+KFRVVPKKSSVFIFQWDCWK+TLLGDKLSSRIPSLPS
Sbjct: 241 FTGTSGVMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPSLPS 300

Query: 385 KN 387
            N
Sbjct: 301 SN 300

[Close]

BLAST of Carg03782 vs. ExPASy TrEMBL
Match: A0A5A7TR23 (Ribonuclease P protein subunit p29 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G003780 PE=3 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 2.4e-138
Identity = 257/302 (85.10%), Postives = 275/302 (91.06%), Query Frame = 0


Query: 85  MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 144
           M+   ASQDLRKHALEALERRCAAAKVELLQQQ K  STEK KKE KGK++LND +S VV
Sbjct: 1   MSDKKASQDLRKHALEALERRCAAAKVELLQQQ-KISSTEKSKKEVKGKSSLNDPTS-VV 60

Query: 145 SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMSTNMDVSSNRGRVVDKICH 204
           S NQY+SSI LPSEGKP NKDVNESDPIYFTLSAAVNE LM+++MDVS NRGRVVDKICH
Sbjct: 61  SRNQYNSSITLPSEGKPPNKDVNESDPIYFTLSAAVNEKLMASSMDVSKNRGRVVDKICH 120

Query: 205 ELRTSGYIKRSRELKVDAWILLDNFVPKRAGMIGSRKRALQSNSKRSKRHMSMKQHKKCG 264
           EL+ SGY+KRS+ELKVDA ILLDNFVPKRAGMIGSR R L+S SKRSKRHMSMKQHKKCG
Sbjct: 121 ELKNSGYMKRSKELKVDASILLDNFVPKRAGMIGSRMRDLRSISKRSKRHMSMKQHKKCG 180

Query: 265 TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMILVVECKIPA 324
           TFDLPSD HK+EIFWPMHDMWKSYMKQRL +VGPD LARNLL+ADLHGAMI VVECKIPA
Sbjct: 181 TFDLPSDCHKYEIFWPMHDMWKSYMKQRLHNVGPDALARNLLIADLHGAMIRVVECKIPA 240

Query: 325 FTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSRIPSLPS 384
           FTG SG+MIRETAETFGI TKD+KFRVVPKKSSVFIFQWDCWK+TLLGDKLSSRIPSLPS
Sbjct: 241 FTGTSGVMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPSLPS 300

Query: 385 KN 387
            N
Sbjct: 301 SN 300

[Close]

BLAST of Carg03782 vs. TAIR 10
Match: AT2G43190.3 (ribonuclease P family protein )

HSP 1 Score: 248.1 bits (632), Expect = 1.2e-65
Identity = 145/301 (48.17%), Postives = 191/301 (63.46%), Query Frame = 0


Query: 85  MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 144
           M       D  + A+ A+ERR A AK +LLQQQ+        +K  K K   +D   ++ 
Sbjct: 1   MGTETVVHDQARWAMAAMERRLAVAKAQLLQQQQ--------QKNEKDKKGTSDVDVSMK 60

Query: 145 SGNQYDSSILLPSEGKPS-NKDVNESDPIYFT-LSAAVNENLMSTNMDVSSNRGRVVDKI 204
             +Q DS   LP+  K S  KD  + D + +T LS  V+ENL++TN+  SS +G +VDK+
Sbjct: 61  ESHQADS---LPTPSKTSIKKDPKDDDSVAYTKLSHPVDENLLATNVKFSSAKGTIVDKV 120

Query: 205 CHELRTSG-----YIKRSRELKVDAWILLDNFVPKRAGMIGSRKRALQSNSKRSKRHMSM 264
            H L  SG     Y++ ++ +K+D +ILLDNFV  R+   GS K+A Q +SKRSK  MSM
Sbjct: 121 LHNLLRSGDSAQKYLQGTKSVKLDNYILLDNFVQSRSSASGS-KKASQKDSKRSKSRMSM 180

Query: 265 KQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMILV 324
           K+ KK G   +P D  KF++F PMH MW+SYM + +   G   L+  LL ADLHGA + V
Sbjct: 181 KRLKKSGALHIPKDLQKFDLFKPMHGMWESYMMKLIKVTGKIQLSLTLLSADLHGAFMFV 240

Query: 325 VECKIPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSS 379
            ECKI +FTG+ GIM+RET+ETFGI T+D+KFRVVPKK SVFI Q DCWKITL GDK  S
Sbjct: 241 AECKIASFTGVQGIMVRETSETFGIITRDDKFRVVPKKLSVFIIQLDCWKITLHGDKFIS 289

[Close]

BLAST of Carg03782 vs. TAIR 10
Match: AT2G43190.2 (ribonuclease P family protein )

HSP 1 Score: 248.1 bits (632), Expect = 1.2e-65
Identity = 145/301 (48.17%), Postives = 191/301 (63.46%), Query Frame = 0


Query: 85  MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 144
           M       D  + A+ A+ERR A AK +LLQQQ+        +K  K K   +D   ++ 
Sbjct: 1   MGTETVVHDQARWAMAAMERRLAVAKAQLLQQQQ--------QKNEKDKKGTSDVDVSMK 60

Query: 145 SGNQYDSSILLPSEGKPS-NKDVNESDPIYFT-LSAAVNENLMSTNMDVSSNRGRVVDKI 204
             +Q DS   LP+  K S  KD  + D + +T LS  V+ENL++TN+  SS +G +VDK+
Sbjct: 61  ESHQADS---LPTPSKTSIKKDPKDDDSVAYTKLSHPVDENLLATNVKFSSAKGTIVDKV 120

Query: 205 CHELRTSG-----YIKRSRELKVDAWILLDNFVPKRAGMIGSRKRALQSNSKRSKRHMSM 264
            H L  SG     Y++ ++ +K+D +ILLDNFV  R+   GS K+A Q +SKRSK  MSM
Sbjct: 121 LHNLLRSGDSAQKYLQGTKSVKLDNYILLDNFVQSRSSASGS-KKASQKDSKRSKSRMSM 180

Query: 265 KQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMILV 324
           K+ KK G   +P D  KF++F PMH MW+SYM + +   G   L+  LL ADLHGA + V
Sbjct: 181 KRLKKSGALHIPKDLQKFDLFKPMHGMWESYMMKLIKVTGKIQLSLTLLSADLHGAFMFV 240

Query: 325 VECKIPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSS 379
            ECKI +FTG+ GIM+RET+ETFGI T+D+KFRVVPKK SVFI Q DCWKITL GDK  S
Sbjct: 241 AECKIASFTGVQGIMVRETSETFGIITRDDKFRVVPKKLSVFIIQLDCWKITLHGDKFIS 289

[Close]

BLAST of Carg03782 vs. TAIR 10
Match: AT2G43190.1 (ribonuclease P family protein )

HSP 1 Score: 247.3 bits (630), Expect = 2.0e-65
Identity = 145/302 (48.01%), Postives = 189/302 (62.58%), Query Frame = 0


Query: 85  MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 144
           M       D  + A+ A+ERR A AK +LLQQQ+        +K  K K   +D   ++ 
Sbjct: 1   MGTETVVHDQARWAMAAMERRLAVAKAQLLQQQQ--------QKNEKDKKGTSDVDVSMK 60

Query: 145 SGNQYDSSILLPSEGKPSNKDVNESDP---IYFTLSAAVNENLMSTNMDVSSNRGRVVDK 204
             +Q DS   LP+  K S K V+  D     Y  LS  V+ENL++TN+  SS +G +VDK
Sbjct: 61  ESHQADS---LPTPSKTSIKKVDPKDDDSVAYTKLSHPVDENLLATNVKFSSAKGTIVDK 120

Query: 205 ICHELRTSG-----YIKRSRELKVDAWILLDNFVPKRAGMIGSRKRALQSNSKRSKRHMS 264
           + H L  SG     Y++ ++ +K+D +ILLDNFV  R+   GS K+A Q +SKRSK  MS
Sbjct: 121 VLHNLLRSGDSAQKYLQGTKSVKLDNYILLDNFVQSRSSASGS-KKASQKDSKRSKSRMS 180

Query: 265 MKQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMIL 324
           MK+ KK G   +P D  KF++F PMH MW+SYM + +   G   L+  LL ADLHGA + 
Sbjct: 181 MKRLKKSGALHIPKDLQKFDLFKPMHGMWESYMMKLIKVTGKIQLSLTLLSADLHGAFMF 240

Query: 325 VVECKIPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLS 379
           V ECKI +FTG+ GIM+RET+ETFGI T+D+KFRVVPKK SVFI Q DCWKITL GDK  
Sbjct: 241 VAECKIASFTGVQGIMVRETSETFGIITRDDKFRVVPKKLSVFIIQLDCWKITLHGDKFI 290

[Close]

BLAST of Carg03782 vs. TAIR 10
Match: AT2G43190.4 (ribonuclease P family protein )

HSP 1 Score: 205.7 bits (522), Expect = 6.8e-53
Identity = 131/297 (44.11%), Postives = 167/297 (56.23%), Query Frame = 0


Query: 85  MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 144
           M       D  + A+ A+ERR A AK +LLQQQ+        +K  K K   +D   ++ 
Sbjct: 1   MGTETVVHDQARWAMAAMERRLAVAKAQLLQQQQ--------QKNEKDKKGTSDVDVSMK 60

Query: 145 SGNQYDSSILLPSEGKPSNKDVNESDP---IYFTLSAAVNENLMSTNMDVSSNRGRVVDK 204
             +Q DS   LP+  K S K V+  D     Y  LS  V+ENL++TN+  SS +G +VDK
Sbjct: 61  ESHQADS---LPTPSKTSIKKVDPKDDDSVAYTKLSHPVDENLLATNVKFSSAKGTIVDK 120

Query: 205 ICHELRTSGYIKRSRELKVDAWILLDNFVPKRAGMIGSRKRALQSNSKRSKRHMSMKQHK 264
                                          R+   GS K+A Q +SKRSK  MSMK+ K
Sbjct: 121 ------------------------------SRSSASGS-KKASQKDSKRSKSRMSMKRLK 180

Query: 265 KCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMILVVECK 324
           K G   +P D  KF++F PMH MW+SYM + +   G   L+  LL ADLHGA + V ECK
Sbjct: 181 KSGALHIPKDLQKFDLFKPMHGMWESYMMKLIKVTGKIQLSLTLLSADLHGAFMFVAECK 240

Query: 325 IPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSR 379
           I +FTG+ GIM+RET+ETFGI T+D+KFRVVPKK SVFI Q DCWKITL GDK  SR
Sbjct: 241 IASFTGVQGIMVRETSETFGIITRDDKFRVVPKKLSVFIIQLDCWKITLHGDKFISR 255

The following BLAST results are available for this feature:

BLAST of Carg03782 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7017346.1	1.9e-219	100.00	Ribonuclease P protein subunit p29, partial [Cucurbita argyrosperma subsp. argyr...	[more]
KAG6580591.1	2.7e-197	93.93	Beta-1,4-xylosyltransferase IRX9, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_023526523.1	1.6e-165	98.68	ribonuclease P protein subunit p29 [Cucurbita pepo subsp. pepo]	[more]
XP_022934539.1	3.6e-165	98.68	ribonuclease P protein subunit p29 [Cucurbita moschata]	[more]
XP_022983897.1	1.4e-164	98.01	uncharacterized protein LOC111482383 [Cucurbita maxima] >XP_022983898.1 uncharac...	[more]

BLAST of Carg03782 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZW76	2.9e-64	48.01	Ribonuclease MRP protein subunit POP4 OS=Arabidopsis thaliana OX=3702 GN=POP4 PE...	[more]
Q5M882	2.8e-19	32.62	Ribonuclease P protein subunit p29 OS=Rattus norvegicus OX=10116 GN=Pop4 PE=2 SV...	[more]
Q2KIB9	3.7e-19	29.30	Ribonuclease P protein subunit p29 OS=Bos taurus OX=9913 GN=POP4 PE=2 SV=1	[more]
O95707	6.2e-19	32.62	Ribonuclease P protein subunit p29 OS=Homo sapiens OX=9606 GN=POP4 PE=1 SV=2	[more]
Q5R7B0	1.4e-18	32.62	Ribonuclease P protein subunit p29 OS=Pongo abelii OX=9601 GN=POP4 PE=2 SV=1	[more]

BLAST of Carg03782 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F2W6	1.7e-165	98.68	ribonuclease P protein subunit p29 OS=Cucurbita moschata OX=3662 GN=LOC111441684...	[more]
A0A6J1J0L0	6.6e-165	98.01	uncharacterized protein LOC111482383 OS=Cucurbita maxima OX=3661 GN=LOC111482383...	[more]
A0A1S3B674	8.7e-141	83.97	Ribonuclease P protein subunit p29 OS=Cucumis melo OX=3656 GN=LOC103486457 PE=3 ...	[more]
A0A1S3B6Y6	2.4e-138	85.10	uncharacterized protein LOC103486457 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7TR23	2.4e-138	85.10	Ribonuclease P protein subunit p29 isoform X1 OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of Carg03782 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43190.3	1.2e-65	48.17	ribonuclease P family protein	[more]
AT2G43190.2	1.2e-65	48.17	ribonuclease P family protein	[more]
AT2G43190.1	2.0e-65	48.01	ribonuclease P family protein	[more]
AT2G43190.4	6.8e-53	44.11	ribonuclease P family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 99..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
IPR002730	Ribonuclease P protein subunit Rpp29/RNP1	SMART	SM00538	pop4_2	coord: 299..382 e-value: 9.4E-11 score: 51.7
IPR002730	Ribonuclease P protein subunit Rpp29/RNP1	PFAM	PF01868	UPF0086	coord: 304..378 e-value: 5.9E-19 score: 67.8
IPR036980	Ribonuclease P/MRP subunit Rpp29 superfamily	GENE3D	2.30.30.210	Ribonuclease P/MRP, subunit p29	coord: 299..381 e-value: 1.3E-20 score: 74.8
IPR016848	Ribonuclease P/MRP subunit Rpp29	PANTHER	PTHR13348	RIBONUCLEASE P SUBUNIT P29	coord: 101..380
IPR023534	Rof/RNase P-like	SUPERFAMILY	101744	Rof/RNase P subunit-like	coord: 308..378

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03782-RA	Carg03782-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0006364	rRNA processing
biological_process	GO:0001682	tRNA 5'-leader removal
biological_process	GO:0006396	RNA processing
biological_process	GO:0008033	tRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0000172	ribonuclease MRP complex
cellular_component	GO:0030677	ribonuclease P complex
molecular_function	GO:0004526	ribonuclease P activity
molecular_function	GO:0033204	ribonuclease P RNA binding
molecular_function	GO:0003723	RNA binding