Carg03767 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATCATAACGGGCTAACCGCGCCAATCTTCGGTGAAAAGTATCCCCGACCTTTCACCTCGAGATTGTCGATGTCGATTTCACCGGCTATTGACGGACAGAGAGGGCACATGGGCGCAGATCGGAAGCGAATCTTCATAGGTTTGGCGGTGGTGATGTTCTTAGGATCGGTAGTGTACACGAGGCTTTGGACCATCGACTTCTCCATGTCTTCCGGCCATGCCGAGCTTCTCAGGTTTGGATTTTCCATCTTTCATTCGTTTTTTTTTCTCTCTCATTATGTTGGTTCTCGTCACGAAAATTTGTTTGAAACTTCAGGAAATGGTACCGGTTTCTCTTATCCATGCTGTCGGAACTTCGAAATGTAAAATGCAGTAAGGTTATCTGTTTTAAATTGCTCGTTTATTATCGTTTAGGAGGCAATTCGACCTTGCGAACCGGGAGGCAATGGATGAATCTGCGGAATGGCGTCGTATGTACGACCACGAACACGATAGAGCTAATAAATGTAGAAGTGATCTAAACAAGGTCAGTATCGCAGGTTTACGTTGCCATGAATTCGATGGAAATTTTTCCTCATTGCATTGAAACTATATATTTGCCTTGATCCAGCGGAATGATTTTGTTACCATTTGTGCCATTATTTTTCTGAAACCGGTTTTCTGACGGGCGCATGCTTGAATTTTTTTTTTTCTCGTTGCTGCTCCTTCGATTCACGGCTTGCCAATCAAAAGATTCATAACTTCTTGCATTGTCAACCGGCAAAAAAAACTTGTTAAACGCGGAATATGCGATTTTTTTTTGTATCGAACAATTAACTCTCTGTTCTTGCCATATTGTTGATCATTTATCTGTCGTACGATGCTGTTGTAAGAAACTGGTTTTCGTTACATATTAGCATAATCTTTTGGGTTTAAGACAATTTAACGTACTATTAGAGCATGGAATATTCAAACATTGGAATGTGATTTCCTTTTCAATTAGTACTGATAGTCCCTTGTTGGATCTTATACTTTTCTCGAATTCTACAAGTGAGAGGCATGCTGAAAAAACATACATAAGATTGAACACATCTCAATCAATTGATTGAACTTCTGAATGGTTTTTTTCTTTAAGAACCTCCATGAGCCGTAAGTTGCTTGTACGTCTTTGCATTTGACCACTGATTCAGTACACTCATACTTGGCAGCTGAAGGAATCTTTTAAGAAGGTGGAGGATGCTGCTAGCTTCGATCAGAAGCTAACAAAGATGCAAACGGTAACTCCTTGTTATAATTATATTGTTGTTGAATTTCGAGTATATAACTAAGTAATAATTTCTCTCTTCAATCTTCCCTTCAAAAAATTAGGAAATGACTTGAGAAGATCCGTATATCATCACATTACATCAAGAAACTCTATCGCTTCGTCTTCAGAACTAAAATTTTGTCCCATATGATCTACTTGGTTTTGTCCCCCTTAAAATGTCAAGGTTTTCAGGAAAACTTAGCTCTTCGCACAAAAGTGGATGCCTTACAGCAAAAGCTAAAGGCCGAGACGTCGAGATGTGGCTCTCAATAGAGCTAATCAACAGACACCGAATATAGTACTAGCATTGAATTTGAATTGTAAGACGTCTATAACAAAGGTTGCTAGTCGTGGCTTTTGATGGGAATTAGTACTTAAACCAAATGTTTGTTTGGATTTTGCAGGAGAGGATATTATTATTATGCAATCTCCACGAGACCATTGACTTTCTCTTCCCTTGTTCATCTCAACCCAGCTGCTTATTCCCATATTTCACTTCTGAGGATTGGATGGATTGTTAAGACTGAAGTTTCAGCTGGCATGACAAAGTGGATAGAGGGAAGAGAAACATTGAGCTGCATAGTCGCTCCTCATAGGCTAAGCAGTGACAAAAAAGGTGGAAAACATGGAAGCTTCTTTTCATGAATCAAGTGTAAGTATAAGGTTAGTTTGTAGAACAATTTAGAAGATGGAAATTGGGTTTACTCTTTCCTTCTCAGTACTCCTTTTAGAATTCAAATGATTCAATAATTAATTTGAAATCCTGCTCAGAGCAATTTAGAATGTGGAAATGATTTTAAATCTGGGTTTTTTGGGTAGGATTTTGAGTCGATATTATATTTCAGCTAAAGACAAACTTAGAAACCAATGATTATGGTGTGACGTCACACTATTAAATGTATGAAAGAGTTTTATATTATATAATAGTTAAATGTGAAACTTTTTAGATCCAACTTTTATTCTTGCAATAAATTTTAAATCTGATTCTGAAAAAAAGTCTAAAAAACTCTTAATTAATATTAAC AATCATAACGGGCTAACCGCGCCAATCTTCGGTGAAAAGTATCCCCGACCTTTCACCTCGAGATTGTCGATGTCGATTTCACCGGCTATTGACGGACAGAGAGGGCACATGGGCGCAGATCGGAAGCGAATCTTCATAGGTTTGGCGGTGGTGATGTTCTTAGGATCGGTAGTGTACACGAGGCTTTGGACCATCGACTTCTCCATGTCTTCCGGCCATGCCGAGCTTCTCAGGAGGCAATTCGACCTTGCGAACCGGGAGGCAATGGATGAATCTGCGGAATGGCGTCGTATGTACGACCACGAACACGATAGAGCTAATAAATGTAGAAGTGATCTAAACAAGTACACTCATACTTGGCAGCTGAAGGAATCTTTTAAGAAGGTGGAGGATGCTGCTAGCTTCGATCAGAAGCTAACAAAGATGCAAACGGAAAACTTAGCTCTTCGCACAAAAGTGGATGCCTTACAGCAAAAGCTAAAGGCCGAGACGTCGAGATGTGGCTCTCAATAGAGCTAATCAACAGACACCGAATATAGTACTAGCATTGAATTTGAATTGAGAGGATATTATTATTATGCAATCTCCACGAGACCATTGACTTTCTCTTCCCTTGTTCATCTCAACCCAGCTGCTTATTCCCATATTTCACTTCTGAGGATTGGATGGATTGTTAAGACTGAAGTTTCAGCTGGCATGACAAAGTGGATAGAGGGAAGAGAAACATTGAGCTGCATAGTCGCTCCTCATAGGCTAAGCAGTGACAAAAAAGGTGGAAAACATGGAAGCTTCTTTTCATGAATCAAGTGTAAGTATAAGGTTAGTTTGTAGAACAATTTAGAAGATGGAAATTGGGTTTACTCTTTCCTTCTCAGTACTCCTTTTAGAATTCAAATGATTCAATAATTAATTTGAAATCCTGCTCAGAGCAATTTAGAATGTGGAAATGATTTTAAATCTGGGTTTTTTGGGTAGGATTTTGAGTCGATATTATATTTCAGCTAAAGACAAACTTAGAAACCAATGATTATGGTGTGACGTCACACTATTAAATGTATGAAAGAGTTTTATATTATATAATAGTTAAATGTGAAACTTTTTAGATCCAACTTTTATTCTTGCAATAAATTTTAAATCTGATTCTGAAAAAAAGTCTAAAAAACTCTTAATTAATATTAAC ATGTCGATTTCACCGGCTATTGACGGACAGAGAGGGCACATGGGCGCAGATCGGAAGCGAATCTTCATAGGTTTGGCGGTGGTGATGTTCTTAGGATCGGTAGTGTACACGAGGCTTTGGACCATCGACTTCTCCATGTCTTCCGGCCATGCCGAGCTTCTCAGGAGGCAATTCGACCTTGCGAACCGGGAGGCAATGGATGAATCTGCGGAATGGCGTCGTATGTACGACCACGAACACGATAGAGCTAATAAATGTAGAAGTGATCTAAACAAGTACACTCATACTTGGCAGCTGAAGGAATCTTTTAAGAAGGTGGAGGATGCTGCTAGCTTCGATCAGAAGCTAACAAAGATGCAAACGGAAAACTTAGCTCTTCGCACAAAAGTGGATGCCTTACAGCAAAAGCTAAAGGCCGAGACGTCGAGATGTGGCTCTCAATAG MSISPAIDGQRGHMGADRKRIFIGLAVVMFLGSVVYTRLWTIDFSMSSGHAELLRRQFDLANREAMDESAEWRRMYDHEHDRANKCRSDLNKYTHTWQLKESFKKVEDAASFDQKLTKMQTENLALRTKVDALQQKLKAETSRCGSQ Homology
BLAST of Carg03767 vs. NCBI nr
Match: KAG7017361.1 (hypothetical protein SDJN02_19226 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 291.6 bits (745), Expect = 3.8e-75 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of Carg03767 vs. NCBI nr
Match: XP_022934052.1 (uncharacterized protein LOC111441336 [Cucurbita moschata]) HSP 1 Score: 260.4 bits (664), Expect = 9.5e-66 Identity = 139/149 (93.29%), Postives = 139/149 (93.29%), Query Frame = 0
BLAST of Carg03767 vs. NCBI nr
Match: KAG6580606.1 (hypothetical protein SDJN03_20608, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 252.3 bits (643), Expect = 2.6e-63 Identity = 132/141 (93.62%), Postives = 133/141 (94.33%), Query Frame = 0
BLAST of Carg03767 vs. NCBI nr
Match: XP_022984097.1 (uncharacterized protein LOC111482511 [Cucurbita maxima]) HSP 1 Score: 249.6 bits (636), Expect = 1.7e-62 Identity = 134/149 (89.93%), Postives = 135/149 (90.60%), Query Frame = 0
BLAST of Carg03767 vs. NCBI nr
Match: XP_023528342.1 (uncharacterized protein LOC111791291 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 223.8 bits (569), Expect = 9.8e-55 Identity = 119/134 (88.81%), Postives = 121/134 (90.30%), Query Frame = 0
BLAST of Carg03767 vs. ExPASy TrEMBL
Match: A0A6J1F1L0 (uncharacterized protein LOC111441336 OS=Cucurbita moschata OX=3662 GN=LOC111441336 PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 4.6e-66 Identity = 139/149 (93.29%), Postives = 139/149 (93.29%), Query Frame = 0
BLAST of Carg03767 vs. ExPASy TrEMBL
Match: A0A6J1J184 (uncharacterized protein LOC111482511 OS=Cucurbita maxima OX=3661 GN=LOC111482511 PE=4 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 8.1e-63 Identity = 134/149 (89.93%), Postives = 135/149 (90.60%), Query Frame = 0
BLAST of Carg03767 vs. ExPASy TrEMBL
Match: A0A5A7TLC1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G003560 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 3.2e-43 Identity = 97/134 (72.39%), Postives = 113/134 (84.33%), Query Frame = 0
BLAST of Carg03767 vs. ExPASy TrEMBL
Match: A0A1S3B6A3 (uncharacterized protein LOC103486481 OS=Cucumis melo OX=3656 GN=LOC103486481 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 5.5e-43 Identity = 97/134 (72.39%), Postives = 112/134 (83.58%), Query Frame = 0
BLAST of Carg03767 vs. ExPASy TrEMBL
Match: A0A5D3DPC8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002550 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 5.5e-43 Identity = 97/134 (72.39%), Postives = 112/134 (83.58%), Query Frame = 0
BLAST of Carg03767 vs. TAIR 10
Match: AT2G37195.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 23 Blast hits to 23 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 113.2 bits (282), Expect = 1.7e-25 Identity = 63/133 (47.37%), Postives = 91/133 (68.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|