Carg03766 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03766
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Cytokinin riboside 5'-monophosphate phosphoribohydrolase
Location	Carg_Chr14: 887315 .. 890051 (-)
RNA-Seq Expression	Carg03766
Synteny	Carg03766

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTTTCGTACATACATTCAAACTGTAAGGAAAGAATCCCATTTCATAAAATGAAACTCTCGAGCCATTGAGATGACGAGTTGGGTTTTTTGTTGTTGTTTGAAGGTTTCAAGGAACATTGATCTGGTTTACGGTGGGGGCAGCATAGGGCTGATGGGTTTAGTGTCACAAGCTGTTCATGATGGCGGTCGGCATGTCATTGGGTATGCCCCCATTTTTTAATTACATCCACTGGTCCCTCCCTTCAACATTGTTTTTGTTTTTTGTGTTCCTTCTTTTGGGTTTATTCACCATTATAAGTTTACCACTGATTTTGTCATCTTACTGTTCTTGTCCAGAGTTATACCCAAGACACTCATGTCTCCTGAGGTATGTCTGTAACCAGCGGCTGCATAAAGCCTTCAACCTTACCTTCCTTATTCAGCTATATTTTAAGAAAGAACCGTTCATTTTATTATTATTGAATCTGATTTTACATTTATTTATTCCAACTCATTCTTCTTTATGATACTTTGAGATCGGTCTTTTTGGCTATGCTTGGGAGCCTTATCCATGGTAGTTAGAATTTACGGCTCTCTTCGTTGTTACGAGGTCTTTTGGGATCTCCAAGTAAAGTTCTGAGAATTTATGCTTTTAAAGTTTACAATATCATACTATTGTTGAGATCCGTGATTACTAACATCTTAATCCTTTCTAATGTCAACATGGTTCATGATTTTTTTTTTTTTTTTTGAGTTCTTCATTTTAAGCCCTTCATTCTTATGTCATGCCAAGTTCAGAAAATTAGAGATCATCTCTGGATCAAAACCTTTTTGAATTGCCCTCCCTTTTCCTAGAGAACCCATCATTTTTCTCTCTCCAACAAGGCTCCAAAAGTCCTCTTTCTCTCTCTAACCTATCCCATTACGTGGTCTTCTTTTACAGTTGACTGGTGAAACTGTCGGGGAAGTGAAGACAGCGGCAGATATGCACCAAAGGAAGGCAGAGATGGCAAAGCATTCAGATGCTTTTATTGCTTTGCCAGGTGAGTATATAAAGCCTGCACATCAAATTCTTAAGCATTTGGGCTTTTATTACTCTCAGTCAAATCAATGTACCCATTTGGGCTATGCTATCTGTCGGTCACTCAAAGCTCTAAAAACCCTTCTTTCAGATCTTCCTTTAGTTCACTCCTGTAAACAAAAACGTGCAATCCTCGTCTTATTCTCTTTTTACCATCAATTAATCTGACCCTTCTGCTTTCGGTGCCTGTCCTTCTAGCCTTCTTGCTTTACTGATCAATCAATTCAACTCCAAAAATCTCGGACTTATTCAACTTTTGCCACACAAACTATGTCACCATCTGCATTAATGGCGGTGTGCATTTATAGCAACTGTGGGCAGCCATCTTCTCCTTACATTTGGTCATGATTCATTAAGAAACCATCATTGACCCATCAATATCAGACACTGAAAAAGATAAGTCTCTTGAATCATACCAGCTGTGGGCAGCTATGTTCTTCCCAAAATTTGATCCTTAATTTCATAGCTATACCTCTGCCATGAACAGAAAACAAGGCAACTTTGACTCACTTTGCTTAAATGGTCGTTGCTATATGGGGAATCATTACATTCCCTCTTTGAAAACTTTTGTCCCCAATTGGTTCTTTTGAATTTCAAAACATTTAAGCTTCTTCCTAAACGTTCACAGATGCGTTTACAAAACATTCCCCTTAAGTTTAAGAACTAAACTTGTAATTTGATCGAAAGCTGCCGAAATCAGAGCTTATTAAGATTAGTAGTCCATTAAGTATAGCAACAGTGATGGATCATCTTCATGTTATTAAAACTGCTAAATTCTTTGTTCCAATCATATGAATGCATGCAGGTGGGTATGGGACTCTGGAAGAACTACTTGAAGTCATAACATGGGCTCAACTTGGAATTCATGACAAGCCAGTCGGTGTATCTTATTTTTGTTATTCGAATATTCCATCTGCTCAGCCTTACTTTTGCCTGTGCTGTGATTGGTTAGCTATGATAGTTACTGAATATGAACAAAATGAATACTAAAAACTGCAGGTGGGGCTGTTGAATGTTGATGGATACTACAATTCATTACTCTCATTTATTGATAAAGCTGTAGAGGAGGGATTCATCACTCCAAATGCGCGTCAAATTATCCTATCTACGCCATCAGTCAAGGAGCTAGTGAAGAAGTTGGAGGTATCATGATAATAACATTGTTGTAAATAAAAATGTTCATTTAACTCACAAGGTTGGAAAAGAATCTCTCCACCGGGATTGAGAGAGGTAGTTATGAGAGATTTTTCCCTTTTAATTAGATGGGGCCTAGACAAGGATTTCTCGTAGTTATGAGAGATTTTTCCCTTTTAATTAGATGGGGCCTAGACAAGGATTTCTCGATTTCTCCCCGTTAGATATTCTCCACAAAATCCGTCTTACTCCGATCACTTTTCGTATATAAATATATAAATAAAATGTGGGATAGAACTTGATCCCCGCAAATTCTCTCCAGGGAGTTTTCGCCCGGTCTTTGCCTTGCTCGGTAGACATTTCTAACTAAGATTGAGCATCAAATATGATACCATATAATTTCTTGTTCTTTAGCTTTATGGATTGGTTATGAGAGAAGCAAATGGAATCCTATGTGATGATTGTTGAGTTGTGTGTGTAGGAGTATGTGCCTTGCCGTGACAGAGTTGCTTCAAAGCTGAGTTGGGCGATAGAATAG

mRNA sequence

ATGGGCTTTCGTACATACATTCAAACTGTTTCAAGGAACATTGATCTGGTTTACGGTGGGGGCAGCATAGGGCTGATGGGTTTAGTGTCACAAGCTGTTCATGATGGCGGTCGGCATGTCATTGGAGTTATACCCAAGACACTCATGTCTCCTGAGTTGACTGGTGAAACTGTCGGGGAAGTGAAGACAGCGGCAGATATGCACCAAAGGAAGGCAGAGATGGCAAAGCATTCAGATGCTTTTATTGCTTTGCCAGGTGGGTATGGGACTCTGGAAGAACTACTTGAAGTCATAACATGGGCTCAACTTGGAATTCATGACAAGCCAGTCGGTGTGGGGCTGTTGAATGTTGATGGATACTACAATTCATTACTCTCATTTATTGATAAAGCTGTAGAGGAGGGATTCATCACTCCAAATGCGCGTCAAATTATCCTATCTACGCCATCAGTCAAGGAGCTAGTGAAGAAGTTGGAGGAGTATGTGCCTTGCCGTGACAGAGTTGCTTCAAAGCTGAGTTGGGCGATAGAATAG

Coding sequence (CDS)

ATGGGCTTTCGTACATACATTCAAACTGTTTCAAGGAACATTGATCTGGTTTACGGTGGGGGCAGCATAGGGCTGATGGGTTTAGTGTCACAAGCTGTTCATGATGGCGGTCGGCATGTCATTGGAGTTATACCCAAGACACTCATGTCTCCTGAGTTGACTGGTGAAACTGTCGGGGAAGTGAAGACAGCGGCAGATATGCACCAAAGGAAGGCAGAGATGGCAAAGCATTCAGATGCTTTTATTGCTTTGCCAGGTGGGTATGGGACTCTGGAAGAACTACTTGAAGTCATAACATGGGCTCAACTTGGAATTCATGACAAGCCAGTCGGTGTGGGGCTGTTGAATGTTGATGGATACTACAATTCATTACTCTCATTTATTGATAAAGCTGTAGAGGAGGGATTCATCACTCCAAATGCGCGTCAAATTATCCTATCTACGCCATCAGTCAAGGAGCTAGTGAAGAAGTTGGAGGAGTATGTGCCTTGCCGTGACAGAGTTGCTTCAAAGCTGAGTTGGGCGATAGAATAG

Protein sequence

MGFRTYIQTVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSFIDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE

Homology

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BLAST of Carg03766 vs. NCBI nr
Match: KAG7017362.1 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 356.7 bits (914), Expect = 1.2e-94
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MGFRTYIQTVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGE 60
           MGFRTYIQTVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGE
Sbjct: 1   MGFRTYIQTVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGE 60

Query: 61  VKTAADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGY 120
           VKTAADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGY
Sbjct: 61  VKTAADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGY 120

Query: 121 YNSLLSFIDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 178
           YNSLLSFIDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE
Sbjct: 121 YNSLLSFIDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 177

[Close]

BLAST of Carg03766 vs. NCBI nr
Match: XP_023528344.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 338.6 bits (867), Expect = 3.3e-89
Identity = 168/170 (98.82%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 8   QTVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM 67
           + VSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM
Sbjct: 42  ELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM 101

Query: 68  HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF 127
           HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF
Sbjct: 102 HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF 161

Query: 128 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 178
           IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE
Sbjct: 162 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 211

[Close]

BLAST of Carg03766 vs. NCBI nr
Match: KAG6580607.1 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 338.6 bits (867), Expect = 3.3e-89
Identity = 168/170 (98.82%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 8   QTVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM 67
           + VSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM
Sbjct: 42  ELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM 101

Query: 68  HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF 127
           HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF
Sbjct: 102 HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF 161

Query: 128 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 178
           IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE
Sbjct: 162 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 211

[Close]

BLAST of Carg03766 vs. NCBI nr
Match: XP_022934050.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 338.2 bits (866), Expect = 4.3e-89
Identity = 167/170 (98.24%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 8   QTVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM 67
           + VSRNIDLVYGGGS+GLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM
Sbjct: 42  ELVSRNIDLVYGGGSVGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM 101

Query: 68  HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF 127
           HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF
Sbjct: 102 HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF 161

Query: 128 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 178
           IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE
Sbjct: 162 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 211

[Close]

BLAST of Carg03766 vs. NCBI nr
Match: XP_022984094.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 333.2 bits (853), Expect = 1.4e-87
Identity = 165/170 (97.06%), Postives = 167/170 (98.24%), Query Frame = 0


Query: 8   QTVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM 67
           + VSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVK AADM
Sbjct: 42  ELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKAAADM 101

Query: 68  HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF 127
           HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPV VGLLNVDGYYNSLL+F
Sbjct: 102 HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVSVGLLNVDGYYNSLLTF 161

Query: 128 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 178
           IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE
Sbjct: 162 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 211

[Close]

BLAST of Carg03766 vs. ExPASy Swiss-Prot
Match: Q8L8B8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana OX=3702 GN=LOG3 PE=1 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.1e-79
Identity = 146/170 (85.88%), Postives = 156/170 (91.76%), Query Frame = 0


Query: 8   QTVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM 67
           + VSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIG+IPKTLM  ELTGETVGEV+  ADM
Sbjct: 40  ELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGIIPKTLMPRELTGETVGEVRAVADM 99

Query: 68  HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF 127
           HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKP  VGLLNVDGYYNSLLSF
Sbjct: 100 HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKP--VGLLNVDGYYNSLLSF 159

Query: 128 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 178
           IDKAVEEGFI+P AR+II+S P+ KELVKKLEEY PC +RVA+KL W +E
Sbjct: 160 IDKAVEEGFISPTAREIIVSAPTAKELVKKLEEYAPCHERVATKLCWEME 207

[Close]

BLAST of Carg03766 vs. ExPASy Swiss-Prot
Match: Q9LFH3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis thaliana OX=3702 GN=LOG4 PE=1 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.1e-78
Identity = 146/170 (85.88%), Postives = 154/170 (90.59%), Query Frame = 0


Query: 8   QTVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM 67
           + V RNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLM  ELTGETVGEV+  ADM
Sbjct: 40  ELVLRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVRAVADM 99

Query: 68  HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF 127
           HQRKAEMA+HSDAFIALPGGYGTLEELLEVITWAQLGIHDKP  VGLLNVDGYYNSLLSF
Sbjct: 100 HQRKAEMARHSDAFIALPGGYGTLEELLEVITWAQLGIHDKP--VGLLNVDGYYNSLLSF 159

Query: 128 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 178
           IDKAVEEGFI+ NARQII+S P+ KELVKKLEEY PC + VA+KL W IE
Sbjct: 160 IDKAVEEGFISTNARQIIISAPTAKELVKKLEEYSPCHESVATKLCWEIE 207

[Close]

BLAST of Carg03766 vs. ExPASy Swiss-Prot
Match: Q8RUN2 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis thaliana OX=3702 GN=LOG1 PE=1 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 1.9e-76
Identity = 143/170 (84.12%), Postives = 154/170 (90.59%), Query Frame = 0


Query: 8   QTVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM 67
           + VSRNIDLVYGGGSIGLMGL+SQAV +GGRHVIGVIPKTLM  E+TGETVGEVK  ADM
Sbjct: 34  ELVSRNIDLVYGGGSIGLMGLISQAVFNGGRHVIGVIPKTLMPREITGETVGEVKAVADM 93

Query: 68  HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF 127
           HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKP  VGLLNV+GYYNSLLSF
Sbjct: 94  HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKP--VGLLNVEGYYNSLLSF 153

Query: 128 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 178
           IDKAVEEGFI+P AR II+S PS KELVKKLE+YVP  ++VASK SW +E
Sbjct: 154 IDKAVEEGFISPTARHIIVSAPSAKELVKKLEDYVPRHEKVASKKSWEME 201

[Close]

BLAST of Carg03766 vs. ExPASy Swiss-Prot
Match: Q8H7U8 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL3 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL3 PE=2 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 2.9e-72
Identity = 134/167 (80.24%), Postives = 152/167 (91.02%), Query Frame = 0


Query: 8   QTVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM 67
           + V+R IDLVYGGGSIGLMGLVSQAV+DGGRHVIGVIPKTLM+PE+ GETVGEV+  +DM
Sbjct: 40  ELVARGIDLVYGGGSIGLMGLVSQAVYDGGRHVIGVIPKTLMTPEIIGETVGEVRPVSDM 99

Query: 68  HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF 127
           HQRKAEMA+ SDAFIALPGGYGTLEELLEVITWAQLGIH KP  VGLLNVDGYYNSLL+F
Sbjct: 100 HQRKAEMARQSDAFIALPGGYGTLEELLEVITWAQLGIHHKP--VGLLNVDGYYNSLLTF 159

Query: 128 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSW 175
           ID+AVEEGFI+P+AR+II+S P+ +EL+ KLEEYVP  DRVAS L+W
Sbjct: 160 IDQAVEEGFISPSARRIIVSAPTAQELMDKLEEYVPYHDRVASGLNW 204

[Close]

BLAST of Carg03766 vs. ExPASy Swiss-Prot
Match: Q7XDB8 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL10 PE=2 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 2.9e-72
Identity = 135/167 (80.84%), Postives = 151/167 (90.42%), Query Frame = 0


Query: 8   QTVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM 67
           + V+R+IDLVYGGGSIGLMGLVSQAV DGGRHVIGVIPKTLM+PE++GETVGEV+  ADM
Sbjct: 33  ELVARSIDLVYGGGSIGLMGLVSQAVFDGGRHVIGVIPKTLMTPEISGETVGEVRPVADM 92

Query: 68  HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF 127
           HQRKAEMA+ SDAFIALPGGYGTLEELLEVITWAQLGIH KP  VGLLNVDGYYNSLL+F
Sbjct: 93  HQRKAEMARQSDAFIALPGGYGTLEELLEVITWAQLGIHHKP--VGLLNVDGYYNSLLTF 152

Query: 128 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSW 175
           IDKAVEEGFI  +AR+II+  P+ +EL+ KLEEYVP  DRVASKL+W
Sbjct: 153 IDKAVEEGFINTSARRIIVMAPTAEELMDKLEEYVPYHDRVASKLNW 197

[Close]

BLAST of Carg03766 vs. ExPASy TrEMBL
Match: A0A6J1F6J9 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111441335 PE=3 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.1e-89
Identity = 167/170 (98.24%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 8   QTVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM 67
           + VSRNIDLVYGGGS+GLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM
Sbjct: 42  ELVSRNIDLVYGGGSVGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM 101

Query: 68  HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF 127
           HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF
Sbjct: 102 HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF 161

Query: 128 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 178
           IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE
Sbjct: 162 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 211

[Close]

BLAST of Carg03766 vs. ExPASy TrEMBL
Match: A0A6J1J9G6 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111482510 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 6.7e-88
Identity = 165/170 (97.06%), Postives = 167/170 (98.24%), Query Frame = 0


Query: 8   QTVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM 67
           + VSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVK AADM
Sbjct: 42  ELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKAAADM 101

Query: 68  HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF 127
           HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPV VGLLNVDGYYNSLL+F
Sbjct: 102 HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVSVGLLNVDGYYNSLLTF 161

Query: 128 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 178
           IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE
Sbjct: 162 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 211

[Close]

BLAST of Carg03766 vs. ExPASy TrEMBL
Match: A0A6J1F0S0 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111441335 PE=3 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 9.7e-87
Identity = 165/170 (97.06%), Postives = 167/170 (98.24%), Query Frame = 0


Query: 8   QTVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM 67
           + VSRNIDLVYGGGS+GLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM
Sbjct: 42  ELVSRNIDLVYGGGSVGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM 101

Query: 68  HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF 127
           HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKP  VGLLNVDGYYNSLLSF
Sbjct: 102 HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKP--VGLLNVDGYYNSLLSF 161

Query: 128 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 178
           IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE
Sbjct: 162 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 209

[Close]

BLAST of Carg03766 vs. ExPASy TrEMBL
Match: A0A6J1J7R3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111482510 PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 6.3e-86
Identity = 164/170 (96.47%), Postives = 166/170 (97.65%), Query Frame = 0


Query: 8   QTVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM 67
           + VSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVK AADM
Sbjct: 42  ELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKAAADM 101

Query: 68  HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF 127
           HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKP  VGLLNVDGYYNSLL+F
Sbjct: 102 HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKP--VGLLNVDGYYNSLLTF 161

Query: 128 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 178
           IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE
Sbjct: 162 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 209

[Close]

BLAST of Carg03766 vs. ExPASy TrEMBL
Match: A0A061ET63 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Theobroma cacao OX=3641 GN=TCM_022168 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.3e-80
Identity = 155/175 (88.57%), Postives = 161/175 (92.00%), Query Frame = 0


Query: 3   FRTYIQTVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVK 62
           F   IQ VSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLM  ELTGETVGEVK
Sbjct: 49  FSMPIQEVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVK 108

Query: 63  TAADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYN 122
             ADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKP  VGLLNVDGYYN
Sbjct: 109 AVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKP--VGLLNVDGYYN 168

Query: 123 SLLSFIDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 178
           SLLSFIDKAVEEGFI+P+ARQII+S P+ KELVKKLEEYVPC +RVASKLSW +E
Sbjct: 169 SLLSFIDKAVEEGFISPSARQIIVSAPTAKELVKKLEEYVPCHERVASKLSWEME 221

[Close]

BLAST of Carg03766 vs. TAIR 10
Match: AT2G37210.1 (lysine decarboxylase family protein )

HSP 1 Score: 297.4 bits (760), Expect = 7.8e-81
Identity = 146/170 (85.88%), Postives = 156/170 (91.76%), Query Frame = 0


Query: 8   QTVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM 67
           + VSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIG+IPKTLM  ELTGETVGEV+  ADM
Sbjct: 40  ELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGIIPKTLMPRELTGETVGEVRAVADM 99

Query: 68  HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF 127
           HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKP  VGLLNVDGYYNSLLSF
Sbjct: 100 HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKP--VGLLNVDGYYNSLLSF 159

Query: 128 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 178
           IDKAVEEGFI+P AR+II+S P+ KELVKKLEEY PC +RVA+KL W +E
Sbjct: 160 IDKAVEEGFISPTAREIIVSAPTAKELVKKLEEYAPCHERVATKLCWEME 207

[Close]

BLAST of Carg03766 vs. TAIR 10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein )

HSP 1 Score: 293.1 bits (749), Expect = 1.5e-79
Identity = 146/170 (85.88%), Postives = 154/170 (90.59%), Query Frame = 0


Query: 8   QTVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM 67
           + V RNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLM  ELTGETVGEV+  ADM
Sbjct: 40  ELVLRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVRAVADM 99

Query: 68  HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF 127
           HQRKAEMA+HSDAFIALPGGYGTLEELLEVITWAQLGIHDKP  VGLLNVDGYYNSLLSF
Sbjct: 100 HQRKAEMARHSDAFIALPGGYGTLEELLEVITWAQLGIHDKP--VGLLNVDGYYNSLLSF 159

Query: 128 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 178
           IDKAVEEGFI+ NARQII+S P+ KELVKKLEEY PC + VA+KL W IE
Sbjct: 160 IDKAVEEGFISTNARQIIISAPTAKELVKKLEEYSPCHESVATKLCWEIE 207

[Close]

BLAST of Carg03766 vs. TAIR 10
Match: AT2G28305.1 (Putative lysine decarboxylase family protein )

HSP 1 Score: 286.6 bits (732), Expect = 1.4e-77
Identity = 143/170 (84.12%), Postives = 154/170 (90.59%), Query Frame = 0


Query: 8   QTVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM 67
           + VSRNIDLVYGGGSIGLMGL+SQAV +GGRHVIGVIPKTLM  E+TGETVGEVK  ADM
Sbjct: 34  ELVSRNIDLVYGGGSIGLMGLISQAVFNGGRHVIGVIPKTLMPREITGETVGEVKAVADM 93

Query: 68  HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF 127
           HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKP  VGLLNV+GYYNSLLSF
Sbjct: 94  HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKP--VGLLNVEGYYNSLLSF 153

Query: 128 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE 178
           IDKAVEEGFI+P AR II+S PS KELVKKLE+YVP  ++VASK SW +E
Sbjct: 154 IDKAVEEGFISPTARHIIVSAPSAKELVKKLEDYVPRHEKVASKKSWEME 201

[Close]

BLAST of Carg03766 vs. TAIR 10
Match: AT2G37210.2 (lysine decarboxylase family protein )

HSP 1 Score: 281.6 bits (719), Expect = 4.5e-76
Identity = 145/194 (74.74%), Postives = 155/194 (79.90%), Query Frame = 0


Query: 8   QTVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM 67
           + VSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIG+IPKTLM  ELTGETVGEV+  ADM
Sbjct: 40  ELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGIIPKTLMPRELTGETVGEVRAVADM 99

Query: 68  HQRKAEMAKHSDAFIALP------------------------GGYGTLEELLEVITWAQL 127
           HQRKAEMAKHSDAFIALP                         GYGTLEELLEVITWAQL
Sbjct: 100 HQRKAEMAKHSDAFIALPEENNLVKLKNMLSWSSCSVKATLKSGYGTLEELLEVITWAQL 159

Query: 128 GIHDKPVGVGLLNVDGYYNSLLSFIDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVP 178
           GIHDKP  VGLLNVDGYYNSLLSFIDKAVEEGFI+P AR+II+S P+ KELVKKLEEY P
Sbjct: 160 GIHDKP--VGLLNVDGYYNSLLSFIDKAVEEGFISPTAREIIVSAPTAKELVKKLEEYAP 219

[Close]

BLAST of Carg03766 vs. TAIR 10
Match: AT5G06300.1 (Putative lysine decarboxylase family protein )

HSP 1 Score: 264.6 bits (675), Expect = 5.6e-71
Identity = 130/167 (77.84%), Postives = 146/167 (87.43%), Query Frame = 0


Query: 8   QTVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADM 67
           + V R IDLVYGGGS+GLMGLVSQAVH GGRHV+GVIPKTLM  E+TGET+GEVK  ADM
Sbjct: 35  ELVERRIDLVYGGGSVGLMGLVSQAVHHGGRHVLGVIPKTLMPREITGETIGEVKAVADM 94

Query: 68  HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSF 127
           HQRKAEMA+ +DAFIALPGGYGTLEELLEVITWAQLGIH KP  VGLLNVDGYYNSLL+F
Sbjct: 95  HQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKP--VGLLNVDGYYNSLLTF 154

Query: 128 IDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSW 175
           IDKAV+EGFI+P AR+II+S P+ KELV++LEEY P  D + SKL W
Sbjct: 155 IDKAVDEGFISPMARRIIVSAPNAKELVRQLEEYEPEFDEITSKLVW 199

The following BLAST results are available for this feature:

BLAST of Carg03766 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7017362.1	1.2e-94	100.00	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3, partial [Cucurbit...	[more]
XP_023528344.1	3.3e-89	98.82	cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like isoform X1 [C...	[more]
KAG6580607.1	3.3e-89	98.82	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3, partial [Cucurbit...	[more]
XP_022934050.1	4.3e-89	98.24	cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like isoform X1 [C...	[more]
XP_022984094.1	1.4e-87	97.06	cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like isoform X1 [C...	[more]

BLAST of Carg03766 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8B8	1.1e-79	85.88	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis tha...	[more]
Q9LFH3	2.1e-78	85.88	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis tha...	[more]
Q8RUN2	1.9e-76	84.12	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis tha...	[more]
Q8H7U8	2.9e-72	80.24	Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL3 OS=Oryza...	[more]
Q7XDB8	2.9e-72	80.84	Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 OS=Oryz...	[more]

BLAST of Carg03766 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F6J9	2.1e-89	98.24	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata O...	[more]
A0A6J1J9G6	6.7e-88	97.06	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=...	[more]
A0A6J1F0S0	9.7e-87	97.06	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata O...	[more]
A0A6J1J7R3	6.3e-86	96.47	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=...	[more]
A0A061ET63	2.3e-80	88.57	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Theobroma cacao OX=3...	[more]

BLAST of Carg03766 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37210.1	7.8e-81	85.88	lysine decarboxylase family protein	[more]
AT3G53450.1	1.5e-79	85.88	Putative lysine decarboxylase family protein	[more]
AT2G28305.1	1.4e-77	84.12	Putative lysine decarboxylase family protein	[more]
AT2G37210.2	4.5e-76	74.74	lysine decarboxylase family protein	[more]
AT5G06300.1	5.6e-71	77.84	Putative lysine decarboxylase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR031100	LOG family	PFAM	PF03641	Lysine_decarbox	coord: 26..158 e-value: 4.0E-43 score: 146.7
None	No IPR available	GENE3D	3.40.50.450		coord: 7..160 e-value: 2.6E-67 score: 228.1
None	No IPR available	PANTHER	PTHR31223:SF49	CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG6-RELATED	coord: 9..177
None	No IPR available	PANTHER	PTHR31223	LOG FAMILY PROTEIN YJL055W	coord: 9..177
None	No IPR available	SUPERFAMILY	102405	MCP/YpsA-like	coord: 11..161
IPR005269	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG	TIGRFAM	TIGR00730	TIGR00730	coord: 11..161 e-value: 4.5E-47 score: 158.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03766-RA	Carg03766-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009691	cytokinin biosynthetic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0102682	N6-(Delta2-isopentenyl)-adenosine 5'-monophosphate phosphoribohydrolase activity