Carg03727 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg03727
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionvacuolar protein-sorting-associated protein 37 homolog 1-like
LocationCarg_Chr14: 1073343 .. 1075636 (+)
RNA-Seq ExpressionCarg03727
SyntenyCarg03727
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGATCTCAAGAGGAACAGGTGCGTCCTCCACAACATGTTACCACACAGTCATGGTATCCACCCTCTGTTAGCTCCTCTCGCCCTGCAACCCCAGGTAGCACCTCCTCCAATCATTCCAGTTCACAAAGGCTTTCTGGTAGGCCACAGTCTCCATCACACGTTTCCCCTGCTGAAGCTGCCGGCATTATTTCTGCTTTGAAGGACAAAAGGTAAAGCTCAAGGTCCATGACTACAAAAAATTATGCTTGTGCCCACTGCTTTCCTTGATTCTCATTCATATTCAGAAGTTTATGGTTTTTGGATTATTTTTGTGCAGTTCGAGTTTCCTTTTTTTGGCTCTTTGTACCTATGTACCTTTTCAGTCAATGTTAGTGCCAAAATTTTTAATGCTTTTGAGGAGTGGAAAACCCACTCATCTTTTGTGTGTCTGTGTGTGTTTTAATAAGATTTGAACTTCATTAGTGAAATAAAGCTACATGTGTGTGTTTCTCGTCAAGGACGTTCTTTAAGTGATCATTCTTGTAAGTTAATATATGATGTTTGCATGTTTATAGGTACCGTTGTACAAATTTTTTTATTCAAATGCTTGTTATGATTCGAACCAGATTTCAATGTTCTTTATTTCGTCATTTCAGGATATTGATCCCTCTCTTTTTTCTCCCCTTTTAAATTTGGTCAGTGTTGATGAGTTGCGAAAGCTTTTGTCAGACAAGGATGCATATAATCAGTTCCTCCTTTCACTTGACCAGGTCAAAATTCAGAACAATGTAAGCTACAGTTTCTTCCCTTAGTTCAAGTTTAATTGGGTTGTTTTTGATAGAAGAGAACGAATATGTTCACCTGATGGTTCTCAAGTATCTCGAGCAGATTGTTTATTTAACTATTCATGCAGCCTTTCTATTTCTGATTCCATACTAGCAAATTGCGGAGTATTTTCCTCAGCTTTCCTAGTATACTGCTTGTAAGCATAGGATGTTCATCCTCTCTATTTTCATTATTTCAATGAATAGTTCATTTCTTTATCAAAGAAACAAACCGTTCTTAATCGATATTAAGATTTGCAGGATTTTCTTTCCTGTATTATATCTTTCCCGACTTCGATTATTTTCAATTAAAGGTGGGAGCTAGCAATATCTCAAGAATAGCATCATAGGATTGAGAGGAAACGTATGATTTTATAGAGGTGGAGAGGTCGTGTGATGAAGTTCGGGAGGTGGTGAGTTTCAATGCCTCCTCGTGCACTTCCATCACTAAACCTTTTGATAACTATGTGAATGAGATACAACTGAATTTAGCATAACTGACTCGTGTTACCGAGGAACTGTTTGCTTAACGATTTCTTATGTTTATCATGTGGTTTCTATAGTTGGTCCCTGTTATGTCTCTCTTTATGTAAACTGTTCCTGATTGGTTCCTTCTCTTTTTCATTTTTTTTATATGTCACCAGCTAAAAGATGAGCTGCGTAAGGAAACTCTTCAGCTTGCTAGTAAGTAACATTGCTTTTTTTCAGTGACTTTTATGCTTGCCTTTTCTTCTAAGCACATCTTTACGGGACAAATGTTAATCATGATATTAACTTGAAAAGGTGAGAACTTGGAAAAGGAACCACGCATCATGGAACTCAGAAACCAGGTATGGGTTTATCAGAAAATGGTGAATTCTCTTGCCCTTTATGCTACCTCCCTTTTGTTTATTCTCTCACAGTGCAGAATTATTCGGACAACGGAATTGGCAGCGGCCGAGGAGAAGCTAAACGAGCTTGACCGAAAGAAAGAGGACATTATGAAGCTCTGTTCTCCTGCTTCACTTCTCAAAAGGCTTCAAGGTATATCGTGATAGTCGTTATCGGATTTTGTGGTCACAAATTGGCTCAGATTATTGAAACGTTTTGTTTGCAGAGAGAATGAAAGAGACAGAAGAGGAGTCGGAGAAGGTGCACATGCAGCTCCTTGAGAGAGAGATAGATTTGAGTTCATTTACTCATAAATACAAGAAGCTGCGTATGGATTACCACCGGCGAGCTCTCATTCAACTTGCTGCCAGAACCACCTCAAACTAAACCGCACAATACTGATCACAGTGGCAGTGAGGTATATTCTTAACCGACAAAATTTATTGCCTTACTGCTACTGCTACAAGCTGTTCTCTTTCAGGGGTGGAGGTTGAAATCATTTGAATCATCCATCCCAGATGTGTTTTCTACCAGTTTGTGTGGGTTCGTTTTAGTGATGATAATAAGTTGATTCTTTTCACTTTGATGAATGGTTGTAAAGATGATATCTGTGCTGTTTTG

mRNA sequence

GGATCTCAAGAGGAACAGGTGCGTCCTCCACAACATGTTACCACACAGTCATGGTATCCACCCTCTGTTAGCTCCTCTCGCCCTGCAACCCCAGGTAGCACCTCCTCCAATCATTCCAGTTCACAAAGGCTTTCTGGTAGGCCACAGTCTCCATCACACGTTTCCCCTGCTGAAGCTGCCGGCATTATTTCTGCTTTGAAGGACAAAAGTGTTGATGAGTTGCGAAAGCTTTTGTCAGACAAGGATGCATATAATCAGTTCCTCCTTTCACTTGACCAGGTCAAAATTCAGAACAATCTAAAAGATGAGCTGCGTAAGGAAACTCTTCAGCTTGCTAGTGAGAACTTGGAAAAGGAACCACGCATCATGGAACTCAGAAACCAGGTATGGGTTTATCAGAAAATGGTGAATTCTCTTGCCCTTTATGCTACCTCCCTTTTGTTTATTCTCTCACAGTGCAGAATTATTCGGACAACGGAATTGGCAGCGGCCGAGGAGAAGCTAAACGAGCTTGACCGAAAGAAAGAGGACATTATGAAGCTCTGTTCTCCTGCTTCACTTCTCAAAAGGCTTCAAGAGAGAATGAAAGAGACAGAAGAGGAGTCGGAGAAGGTGCACATGCAGCTCCTTGAGAGAGAGATAGATTTGAGTTCATTTACTCATAAATACAAGAAGCTGCGTATGGATTACCACCGGCGAGCTCTCATTCAACTTGCTGCCAGAACCACCTCAAACTAAACCGCACAATACTGATCACAGTGGCAGTGAGGTATATTCTTAACCGACAAAATTTATTGCCTTACTGCTACTGCTACAAGCTGTTCTCTTTCAGGGGTGGAGGTTGAAATCATTTGAATCATCCATCCCAGATGTGTTTTCTACCAGTTTGTGTGGGTTCGTTTTAGTGATGATAATAAGTTGATTCTTTTCACTTTGATGAATGGTTGTAAAGATGATATCTGTGCTGTTTTG

Coding sequence (CDS)

GGATCTCAAGAGGAACAGGTGCGTCCTCCACAACATGTTACCACACAGTCATGGTATCCACCCTCTGTTAGCTCCTCTCGCCCTGCAACCCCAGGTAGCACCTCCTCCAATCATTCCAGTTCACAAAGGCTTTCTGGTAGGCCACAGTCTCCATCACACGTTTCCCCTGCTGAAGCTGCCGGCATTATTTCTGCTTTGAAGGACAAAAGTGTTGATGAGTTGCGAAAGCTTTTGTCAGACAAGGATGCATATAATCAGTTCCTCCTTTCACTTGACCAGGTCAAAATTCAGAACAATCTAAAAGATGAGCTGCGTAAGGAAACTCTTCAGCTTGCTAGTGAGAACTTGGAAAAGGAACCACGCATCATGGAACTCAGAAACCAGGTATGGGTTTATCAGAAAATGGTGAATTCTCTTGCCCTTTATGCTACCTCCCTTTTGTTTATTCTCTCACAGTGCAGAATTATTCGGACAACGGAATTGGCAGCGGCCGAGGAGAAGCTAAACGAGCTTGACCGAAAGAAAGAGGACATTATGAAGCTCTGTTCTCCTGCTTCACTTCTCAAAAGGCTTCAAGAGAGAATGAAAGAGACAGAAGAGGAGTCGGAGAAGGTGCACATGCAGCTCCTTGAGAGAGAGATAGATTTGAGTTCATTTACTCATAAATACAAGAAGCTGCGTATGGATTACCACCGGCGAGCTCTCATTCAACTTGCTGCCAGAACCACCTCAAACTAA

Protein sequence

GSQEEQVRPPQHVTTQSWYPPSVSSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAEAAGIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASENLEKEPRIMELRNQVWVYQKMVNSLALYATSLLFILSQCRIIRTTELAAAEEKLNELDRKKEDIMKLCSPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRMDYHRRALIQLAARTTSN
Homology
BLAST of Carg03727 vs. NCBI nr
Match: KAG7017401.1 (Vacuolar protein-sorting-associated protein 37-like 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 451.1 bits (1159), Expect = 6.3e-123
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0

Query: 1   GSQEEQVRPPQHVTTQSWYPPSVSSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAEAA 60
           GSQEEQVRPPQHVTTQSWYPPSVSSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAEAA
Sbjct: 1   GSQEEQVRPPQHVTTQSWYPPSVSSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAEAA 60

Query: 61  GIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASENLEKEP 120
           GIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASENLEKEP
Sbjct: 61  GIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASENLEKEP 120

Query: 121 RIMELRNQVWVYQKMVNSLALYATSLLFILSQCRIIRTTELAAAEEKLNELDRKKEDIMK 180
           RIMELRNQVWVYQKMVNSLALYATSLLFILSQCRIIRTTELAAAEEKLNELDRKKEDIMK
Sbjct: 121 RIMELRNQVWVYQKMVNSLALYATSLLFILSQCRIIRTTELAAAEEKLNELDRKKEDIMK 180

Query: 181 LCSPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRMDYHRRALIQLAA 240
           LCSPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRMDYHRRALIQLAA
Sbjct: 181 LCSPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRMDYHRRALIQLAA 240

Query: 241 RTTSN 246
           RTTSN
Sbjct: 241 RTTSN 245

BLAST of Carg03727 vs. NCBI nr
Match: XP_022935552.1 (vacuolar protein-sorting-associated protein 37 homolog 1-like [Cucurbita moschata] >KAG6580645.1 Vacuolar protein-sorting-associated protein 37-like 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 392.9 bits (1008), Expect = 2.0e-105
Identity = 220/245 (89.80%), Postives = 221/245 (90.20%), Query Frame = 0

Query: 1   GSQEEQVRPPQHVTTQSWYPPSVSSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAEAA 60
           GSQEEQVRPPQHVTTQSWYPPSVSSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAEAA
Sbjct: 6   GSQEEQVRPPQHVTTQSWYPPSVSSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAEAA 65

Query: 61  GIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASENLEKEP 120
           GIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASEN+EKEP
Sbjct: 66  GIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASENVEKEP 125

Query: 121 RIMELRNQVWVYQKMVNSLALYATSLLFILSQCRIIRTTELAAAEEKLNELDRKKEDIMK 180
           RIMELRN                        QCRIIRTTELAAAEEKLNELDRKKEDIMK
Sbjct: 126 RIMELRN------------------------QCRIIRTTELAAAEEKLNELDRKKEDIMK 185

Query: 181 LCSPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRMDYHRRALIQLAA 240
           LCSPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRMDYHRRALIQLAA
Sbjct: 186 LCSPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRMDYHRRALIQLAA 226

Query: 241 RTTSN 246
           RTTSN
Sbjct: 246 RTTSN 226

BLAST of Carg03727 vs. NCBI nr
Match: XP_023529056.1 (vacuolar protein-sorting-associated protein 37 homolog 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 377.5 bits (968), Expect = 8.9e-101
Identity = 213/243 (87.65%), Postives = 215/243 (88.48%), Query Frame = 0

Query: 1   GSQEEQVRPPQHVTTQSWYPPSVSSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAEAA 60
           GSQEEQVRPPQ VTTQSWYPPSVSSSRPATPGSTSSNHSS QRLSGRPQSPSHVSPAEAA
Sbjct: 6   GSQEEQVRPPQDVTTQSWYPPSVSSSRPATPGSTSSNHSSPQRLSGRPQSPSHVSPAEAA 65

Query: 61  GIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASENLEKEP 120
           GIISALKDKSVDELRKLLSDKDAYNQFLLSLDQ+K QNNLKDELRKETLQLASENLEKEP
Sbjct: 66  GIISALKDKSVDELRKLLSDKDAYNQFLLSLDQIKTQNNLKDELRKETLQLASENLEKEP 125

Query: 121 RIMELRNQVWVYQKMVNSLALYATSLLFILSQCRIIRTTELAAAEEKLNELDRKKEDIMK 180
            IMELRN                        QCRIIRTTELAAAEEKLNELDRKKEDIMK
Sbjct: 126 CIMELRN------------------------QCRIIRTTELAAAEEKLNELDRKKEDIMK 185

Query: 181 LCSPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRMDYHRRALIQLAA 240
           LCSPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRM+YHRRALIQLAA
Sbjct: 186 LCSPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRMNYHRRALIQLAA 224

Query: 241 RTT 244
           RTT
Sbjct: 246 RTT 224

BLAST of Carg03727 vs. NCBI nr
Match: XP_022983099.1 (vacuolar protein-sorting-associated protein 37 homolog 1-like [Cucurbita maxima])

HSP 1 Score: 375.2 bits (962), Expect = 4.4e-100
Identity = 211/243 (86.83%), Postives = 215/243 (88.48%), Query Frame = 0

Query: 1   GSQEEQVRPPQHVTTQSWYPPSVSSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAEAA 60
           GSQEEQVRPPQ VTTQSWYPPSVSSSRPATPGSTSSNHSSS RLSGRPQSPSHVSPAEAA
Sbjct: 6   GSQEEQVRPPQDVTTQSWYPPSVSSSRPATPGSTSSNHSSSHRLSGRPQSPSHVSPAEAA 65

Query: 61  GIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASENLEKEP 120
           GIISALKDKSVDELRKLLSDKDAYNQFLLSLDQV+ QNNLKDELRKETLQLASENLEKEP
Sbjct: 66  GIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVQTQNNLKDELRKETLQLASENLEKEP 125

Query: 121 RIMELRNQVWVYQKMVNSLALYATSLLFILSQCRIIRTTELAAAEEKLNELDRKKEDIMK 180
           RIMELRN                        QCRIIRTTELAAAEEKLNELDRKKEDIMK
Sbjct: 126 RIMELRN------------------------QCRIIRTTELAAAEEKLNELDRKKEDIMK 185

Query: 181 LCSPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRMDYHRRALIQLAA 240
           LCSPASLLKRLQERMKETEEES+ VHMQLLEREIDLSSFTHKYK+LRM+YHRRALIQLAA
Sbjct: 186 LCSPASLLKRLQERMKETEEESDNVHMQLLEREIDLSSFTHKYKRLRMNYHRRALIQLAA 224

Query: 241 RTT 244
           RTT
Sbjct: 246 RTT 224

BLAST of Carg03727 vs. NCBI nr
Match: XP_038904149.1 (vacuolar protein-sorting-associated protein 37 homolog 1-like [Benincasa hispida])

HSP 1 Score: 353.2 bits (905), Expect = 1.8e-93
Identity = 198/243 (81.48%), Postives = 211/243 (86.83%), Query Frame = 0

Query: 1   GSQEEQVRPPQHVTTQSWYPPSVSSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAEAA 60
           GSQEEQVRP Q V+TQSWYPPSVSSSRPATPGSTSSNHSSSQRLS RPQSPSHV PAEAA
Sbjct: 6   GSQEEQVRPSQDVSTQSWYPPSVSSSRPATPGSTSSNHSSSQRLSDRPQSPSHVPPAEAA 65

Query: 61  GIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASENLEKEP 120
           GIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNL+DELRKETLQLASENLEKEP
Sbjct: 66  GIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLRDELRKETLQLASENLEKEP 125

Query: 121 RIMELRNQVWVYQKMVNSLALYATSLLFILSQCRIIRTTELAAAEEKLNELDRKKEDIMK 180
           RIMELRN                        QCRIIRTTELAAA+EKLNELD+KKE+I+K
Sbjct: 126 RIMELRN------------------------QCRIIRTTELAAAKEKLNELDQKKEEILK 185

Query: 181 LCSPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRMDYHRRALIQLAA 240
           LCSPASLL+RLQE MKETE+ES+ +H QLL+REIDL SFTHKYKKLRM+YHRRALIQLAA
Sbjct: 186 LCSPASLLQRLQESMKETEDESDNLHRQLLDREIDLGSFTHKYKKLRMNYHRRALIQLAA 224

Query: 241 RTT 244
           +TT
Sbjct: 246 KTT 224

BLAST of Carg03727 vs. ExPASy Swiss-Prot
Match: Q9SCP9 (Vacuolar protein-sorting-associated protein 37 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=VPS37-1 PE=1 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.1e-57
Identity = 137/242 (56.61%), Postives = 163/242 (67.36%), Query Frame = 0

Query: 3   QEEQVRPPQHVTTQSWYPPSVSSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAEAAGI 62
           Q+ Q RP +  +   WY PS+ SS             SS R     Q  + VSP EAAGI
Sbjct: 11  QQGQSRPQEASSQSPWYSPSLVSS------------PSSSRPQSSGQISAQVSPGEAAGI 70

Query: 63  ISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASENLEKEPRI 122
           I  LKDKSVDELRKLLSDKDAY QFLLSLDQVK+QNN+KDELR+ETLQLA +NLEKEP+I
Sbjct: 71  IVFLKDKSVDELRKLLSDKDAYQQFLLSLDQVKVQNNIKDELRRETLQLARDNLEKEPQI 130

Query: 123 MELRNQVWVYQKMVNSLALYATSLLFILSQCRIIRTTELAAAEEKLNELDRKKEDIMKLC 182
           MELRN                        QCRIIRTTELA A+EKLNEL+R+KE+I+K  
Sbjct: 131 MELRN------------------------QCRIIRTTELATAQEKLNELERQKEEILKFY 190

Query: 183 SPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRMDYHRRALIQLAART 242
           SP SLL +LQE M + +EESE +  + LE+EID ++F  KYKKLR  YHRRALI LAA+T
Sbjct: 191 SPGSLLHKLQEAMNQVDEESEALQEKFLEKEIDTAAFVQKYKKLRTTYHRRALIHLAAKT 216

Query: 243 TS 245
           ++
Sbjct: 251 SN 216

BLAST of Carg03727 vs. ExPASy Swiss-Prot
Match: Q3EBL9 (Vacuolar protein-sorting-associated protein 37 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=VPS37-2 PE=1 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 6.2e-57
Identity = 135/246 (54.88%), Postives = 164/246 (66.67%), Query Frame = 0

Query: 3   QEEQVRPPQHVTTQSWYPPSV----SSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAE 62
           Q+ Q RP    +   WY PS+    SSSRP T G                Q PSHVSP E
Sbjct: 11  QQGQSRPSPEASATPWYSPSLVTSPSSSRPQTSG----------------QIPSHVSPGE 70

Query: 63  AAGIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASENLEK 122
           AAGII+ LKDKSVDELRKLLSDKDAY QFL SLDQV IQNN+++ELRKETL LA ENLEK
Sbjct: 71  AAGIIAILKDKSVDELRKLLSDKDAYQQFLHSLDQVTIQNNIREELRKETLHLARENLEK 130

Query: 123 EPRIMELRNQVWVYQKMVNSLALYATSLLFILSQCRIIRTTELAAAEEKLNELDRKKEDI 182
           EP+I+ELRN                        QCRIIRT+ELA A+EKLNEL+ ++E+I
Sbjct: 131 EPQIVELRN------------------------QCRIIRTSELATAQEKLNELENQREEI 190

Query: 183 MKLCSPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRMDYHRRALIQL 242
           +K  SP SLL RLQ+ M + +EESE++  + +E++ID ++F  KYKKLR  YHRRALI L
Sbjct: 191 LKFYSPGSLLHRLQDAMNQVDEESEELQQKFMEKDIDTAAFVQKYKKLRSKYHRRALIHL 216

Query: 243 AARTTS 245
           AA+T+S
Sbjct: 251 AAKTSS 216

BLAST of Carg03727 vs. ExPASy TrEMBL
Match: A0A6J1F5W3 (vacuolar protein-sorting-associated protein 37 homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111442393 PE=3 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 9.9e-106
Identity = 220/245 (89.80%), Postives = 221/245 (90.20%), Query Frame = 0

Query: 1   GSQEEQVRPPQHVTTQSWYPPSVSSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAEAA 60
           GSQEEQVRPPQHVTTQSWYPPSVSSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAEAA
Sbjct: 6   GSQEEQVRPPQHVTTQSWYPPSVSSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAEAA 65

Query: 61  GIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASENLEKEP 120
           GIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASEN+EKEP
Sbjct: 66  GIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASENVEKEP 125

Query: 121 RIMELRNQVWVYQKMVNSLALYATSLLFILSQCRIIRTTELAAAEEKLNELDRKKEDIMK 180
           RIMELRN                        QCRIIRTTELAAAEEKLNELDRKKEDIMK
Sbjct: 126 RIMELRN------------------------QCRIIRTTELAAAEEKLNELDRKKEDIMK 185

Query: 181 LCSPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRMDYHRRALIQLAA 240
           LCSPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRMDYHRRALIQLAA
Sbjct: 186 LCSPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRMDYHRRALIQLAA 226

Query: 241 RTTSN 246
           RTTSN
Sbjct: 246 RTTSN 226

BLAST of Carg03727 vs. ExPASy TrEMBL
Match: A0A6J1J6C4 (vacuolar protein-sorting-associated protein 37 homolog 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481746 PE=3 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 2.1e-100
Identity = 211/243 (86.83%), Postives = 215/243 (88.48%), Query Frame = 0

Query: 1   GSQEEQVRPPQHVTTQSWYPPSVSSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAEAA 60
           GSQEEQVRPPQ VTTQSWYPPSVSSSRPATPGSTSSNHSSS RLSGRPQSPSHVSPAEAA
Sbjct: 6   GSQEEQVRPPQDVTTQSWYPPSVSSSRPATPGSTSSNHSSSHRLSGRPQSPSHVSPAEAA 65

Query: 61  GIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASENLEKEP 120
           GIISALKDKSVDELRKLLSDKDAYNQFLLSLDQV+ QNNLKDELRKETLQLASENLEKEP
Sbjct: 66  GIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVQTQNNLKDELRKETLQLASENLEKEP 125

Query: 121 RIMELRNQVWVYQKMVNSLALYATSLLFILSQCRIIRTTELAAAEEKLNELDRKKEDIMK 180
           RIMELRN                        QCRIIRTTELAAAEEKLNELDRKKEDIMK
Sbjct: 126 RIMELRN------------------------QCRIIRTTELAAAEEKLNELDRKKEDIMK 185

Query: 181 LCSPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRMDYHRRALIQLAA 240
           LCSPASLLKRLQERMKETEEES+ VHMQLLEREIDLSSFTHKYK+LRM+YHRRALIQLAA
Sbjct: 186 LCSPASLLKRLQERMKETEEESDNVHMQLLEREIDLSSFTHKYKRLRMNYHRRALIQLAA 224

Query: 241 RTT 244
           RTT
Sbjct: 246 RTT 224

BLAST of Carg03727 vs. ExPASy TrEMBL
Match: A0A0A0LEC7 (VPS37 C-terminal domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G746590 PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 9.6e-93
Identity = 196/243 (80.66%), Postives = 208/243 (85.60%), Query Frame = 0

Query: 1   GSQEEQVRPPQHVTTQSWYPPSVSSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAEAA 60
           GSQEEQVRPP  V+TQSWYPPSVSSSRP TPGSTSSNHSSSQRLS RPQSPSHVSPAEAA
Sbjct: 6   GSQEEQVRPPPDVSTQSWYPPSVSSSRPGTPGSTSSNHSSSQRLSDRPQSPSHVSPAEAA 65

Query: 61  GIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASENLEKEP 120
           GIISALKDKSVDELRKLLSDKD YNQF LSLDQVKIQNNL+DELRKETLQLASENLEKEP
Sbjct: 66  GIISALKDKSVDELRKLLSDKDTYNQFFLSLDQVKIQNNLRDELRKETLQLASENLEKEP 125

Query: 121 RIMELRNQVWVYQKMVNSLALYATSLLFILSQCRIIRTTELAAAEEKLNELDRKKEDIMK 180
           RIMELRN                        QC IIRTTELAAA+EKLNELD+KKE+I+K
Sbjct: 126 RIMELRN------------------------QCSIIRTTELAAAKEKLNELDQKKEEILK 185

Query: 181 LCSPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRMDYHRRALIQLAA 240
           LCSPASLL+RLQE MKETEEES+ +H QLL+REIDLSSFTHKYKKLR+ YH+RALIQLAA
Sbjct: 186 LCSPASLLRRLQESMKETEEESDNLHRQLLDREIDLSSFTHKYKKLRISYHQRALIQLAA 224

Query: 241 RTT 244
           RTT
Sbjct: 246 RTT 224

BLAST of Carg03727 vs. ExPASy TrEMBL
Match: A0A1S3B6H0 (vacuolar protein-sorting-associated protein 37 homolog 2-like OS=Cucumis melo OX=3656 GN=LOC103486542 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.3e-92
Identity = 195/243 (80.25%), Postives = 210/243 (86.42%), Query Frame = 0

Query: 1   GSQEEQVRPPQHVTTQSWYPPSVSSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAEAA 60
           GSQEEQVRPP  V+TQSWYPPSVSSSRP TPGSTSSNHSSSQRLS RPQSPSHVSPAEAA
Sbjct: 6   GSQEEQVRPPPDVSTQSWYPPSVSSSRPGTPGSTSSNHSSSQRLSDRPQSPSHVSPAEAA 65

Query: 61  GIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASENLEKEP 120
           GIISALKDKSVDELRKLLSDKD+YNQF LSLDQVKIQNNL+DELRKETLQLASENLEKEP
Sbjct: 66  GIISALKDKSVDELRKLLSDKDSYNQFFLSLDQVKIQNNLRDELRKETLQLASENLEKEP 125

Query: 121 RIMELRNQVWVYQKMVNSLALYATSLLFILSQCRIIRTTELAAAEEKLNELDRKKEDIMK 180
           RIMELRN                        QC IIRTTELAAA+EKLNELD+KKE+I+K
Sbjct: 126 RIMELRN------------------------QCSIIRTTELAAAKEKLNELDQKKEEILK 185

Query: 181 LCSPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRMDYHRRALIQLAA 240
           LCSPASLL+RLQE MKETEEES+ +H QLL+REIDLSSFTHKYKKLR++YH+RALIQLAA
Sbjct: 186 LCSPASLLRRLQESMKETEEESDNLHRQLLDREIDLSSFTHKYKKLRINYHQRALIQLAA 224

Query: 241 RTT 244
           +TT
Sbjct: 246 KTT 224

BLAST of Carg03727 vs. ExPASy TrEMBL
Match: A0A6J1CT75 (vacuolar protein-sorting-associated protein 37 homolog 1 OS=Momordica charantia OX=3673 GN=LOC111014363 PE=3 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.6e-92
Identity = 199/247 (80.57%), Postives = 210/247 (85.02%), Query Frame = 0

Query: 1   GSQEEQVRPPQHVTTQSWYPPSV----SSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSP 60
           GSQEEQVRPPQ VTTQSWYP SV    SSSRP TPGSTSS+HSSSQRLS RPQSPSHVSP
Sbjct: 6   GSQEEQVRPPQEVTTQSWYPASVVGTPSSSRPGTPGSTSSSHSSSQRLSDRPQSPSHVSP 65

Query: 61  AEAAGIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASENL 120
           AEAAGIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNL+DELR ETLQLA ENL
Sbjct: 66  AEAAGIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLRDELRNETLQLARENL 125

Query: 121 EKEPRIMELRNQVWVYQKMVNSLALYATSLLFILSQCRIIRTTELAAAEEKLNELDRKKE 180
           EKEPRIMELRN                        QCRIIRTTELAAAEEKLNELDR+KE
Sbjct: 126 EKEPRIMELRN------------------------QCRIIRTTELAAAEEKLNELDRQKE 185

Query: 181 DIMKLCSPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRMDYHRRALI 240
           +I+KLCSPASLL+RL+ERMK TEEESE +H QLL+R+IDLSSFTHKYKKLRMDYHRRALI
Sbjct: 186 EILKLCSPASLLQRLRERMKNTEEESENLHRQLLDRDIDLSSFTHKYKKLRMDYHRRALI 228

Query: 241 QLAARTT 244
           QL+ARTT
Sbjct: 246 QLSARTT 228

BLAST of Carg03727 vs. TAIR 10
Match: AT3G53120.1 (Modifier of rudimentary (Mod(r)) protein )

HSP 1 Score: 223.8 bits (569), Expect = 1.5e-58
Identity = 137/242 (56.61%), Postives = 163/242 (67.36%), Query Frame = 0

Query: 3   QEEQVRPPQHVTTQSWYPPSVSSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAEAAGI 62
           Q+ Q RP +  +   WY PS+ SS             SS R     Q  + VSP EAAGI
Sbjct: 11  QQGQSRPQEASSQSPWYSPSLVSS------------PSSSRPQSSGQISAQVSPGEAAGI 70

Query: 63  ISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASENLEKEPRI 122
           I  LKDKSVDELRKLLSDKDAY QFLLSLDQVK+QNN+KDELR+ETLQLA +NLEKEP+I
Sbjct: 71  IVFLKDKSVDELRKLLSDKDAYQQFLLSLDQVKVQNNIKDELRRETLQLARDNLEKEPQI 130

Query: 123 MELRNQVWVYQKMVNSLALYATSLLFILSQCRIIRTTELAAAEEKLNELDRKKEDIMKLC 182
           MELRN                        QCRIIRTTELA A+EKLNEL+R+KE+I+K  
Sbjct: 131 MELRN------------------------QCRIIRTTELATAQEKLNELERQKEEILKFY 190

Query: 183 SPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRMDYHRRALIQLAART 242
           SP SLL +LQE M + +EESE +  + LE+EID ++F  KYKKLR  YHRRALI LAA+T
Sbjct: 191 SPGSLLHKLQEAMNQVDEESEALQEKFLEKEIDTAAFVQKYKKLRTTYHRRALIHLAAKT 216

Query: 243 TS 245
           ++
Sbjct: 251 SN 216

BLAST of Carg03727 vs. TAIR 10
Match: AT2G36680.1 (Modifier of rudimentary (Mod(r)) protein )

HSP 1 Score: 222.2 bits (565), Expect = 4.4e-58
Identity = 135/246 (54.88%), Postives = 164/246 (66.67%), Query Frame = 0

Query: 3   QEEQVRPPQHVTTQSWYPPSV----SSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAE 62
           Q+ Q RP    +   WY PS+    SSSRP T G                Q PSHVSP E
Sbjct: 11  QQGQSRPSPEASATPWYSPSLVTSPSSSRPQTSG----------------QIPSHVSPGE 70

Query: 63  AAGIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASENLEK 122
           AAGII+ LKDKSVDELRKLLSDKDAY QFL SLDQV IQNN+++ELRKETL LA ENLEK
Sbjct: 71  AAGIIAILKDKSVDELRKLLSDKDAYQQFLHSLDQVTIQNNIREELRKETLHLARENLEK 130

Query: 123 EPRIMELRNQVWVYQKMVNSLALYATSLLFILSQCRIIRTTELAAAEEKLNELDRKKEDI 182
           EP+I+ELRN                        QCRIIRT+ELA A+EKLNEL+ ++E+I
Sbjct: 131 EPQIVELRN------------------------QCRIIRTSELATAQEKLNELENQREEI 190

Query: 183 MKLCSPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRMDYHRRALIQL 242
           +K  SP SLL RLQ+ M + +EESE++  + +E++ID ++F  KYKKLR  YHRRALI L
Sbjct: 191 LKFYSPGSLLHRLQDAMNQVDEESEELQQKFMEKDIDTAAFVQKYKKLRSKYHRRALIHL 216

Query: 243 AARTTS 245
           AA+T+S
Sbjct: 251 AAKTSS 216

BLAST of Carg03727 vs. TAIR 10
Match: AT2G36680.3 (Modifier of rudimentary (Mod(r)) protein )

HSP 1 Score: 133.3 bits (334), Expect = 2.7e-31
Identity = 89/161 (55.28%), Postives = 103/161 (63.98%), Query Frame = 0

Query: 3   QEEQVRPPQHVTTQSWYPPSV----SSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAE 62
           Q+ Q RP    +   WY PS+    SSSRP T G                Q PSHVSP E
Sbjct: 11  QQGQSRPSPEASATPWYSPSLVTSPSSSRPQTSG----------------QIPSHVSPGE 70

Query: 63  AAGIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASENLEK 122
           AAGII+ LKDKSVDELRKLLSDKDAY QFL SLDQV IQNN+++ELRKETL LA ENLEK
Sbjct: 71  AAGIIAILKDKSVDELRKLLSDKDAYQQFLHSLDQVTIQNNIREELRKETLHLARENLEK 130

Query: 123 EPRIMELRNQVWVYQKMVNSLALYATSLLFILSQCRIIRTT 160
           EP+I+ELRNQV    + ++ L  Y    + +LS C I   T
Sbjct: 131 EPQIVELRNQVNNIIQSLSELIKY----MKLLSICIIFLKT 151

BLAST of Carg03727 vs. TAIR 10
Match: AT2G36680.4 (Modifier of rudimentary (Mod(r)) protein )

HSP 1 Score: 133.3 bits (334), Expect = 2.7e-31
Identity = 89/161 (55.28%), Postives = 103/161 (63.98%), Query Frame = 0

Query: 3   QEEQVRPPQHVTTQSWYPPSV----SSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAE 62
           Q+ Q RP    +   WY PS+    SSSRP T G                Q PSHVSP E
Sbjct: 11  QQGQSRPSPEASATPWYSPSLVTSPSSSRPQTSG----------------QIPSHVSPGE 70

Query: 63  AAGIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASENLEK 122
           AAGII+ LKDKSVDELRKLLSDKDAY QFL SLDQV IQNN+++ELRKETL LA ENLEK
Sbjct: 71  AAGIIAILKDKSVDELRKLLSDKDAYQQFLHSLDQVTIQNNIREELRKETLHLARENLEK 130

Query: 123 EPRIMELRNQVWVYQKMVNSLALYATSLLFILSQCRIIRTT 160
           EP+I+ELRNQV    + ++ L  Y    + +LS C I   T
Sbjct: 131 EPQIVELRNQVNNIIQSLSELIKY----MKLLSICIIFLKT 151

BLAST of Carg03727 vs. TAIR 10
Match: AT2G36680.2 (Modifier of rudimentary (Mod(r)) protein )

HSP 1 Score: 132.9 bits (333), Expect = 3.5e-31
Identity = 81/130 (62.31%), Postives = 90/130 (69.23%), Query Frame = 0

Query: 3   QEEQVRPPQHVTTQSWYPPSV----SSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAE 62
           Q+ Q RP    +   WY PS+    SSSRP T G                Q PSHVSP E
Sbjct: 11  QQGQSRPSPEASATPWYSPSLVTSPSSSRPQTSG----------------QIPSHVSPGE 70

Query: 63  AAGIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASENLEK 122
           AAGII+ LKDKSVDELRKLLSDKDAY QFL SLDQV IQNN+++ELRKETL LA ENLEK
Sbjct: 71  AAGIIAILKDKSVDELRKLLSDKDAYQQFLHSLDQVTIQNNIREELRKETLHLARENLEK 124

Query: 123 EPRIMELRNQ 129
           EP+I+ELRNQ
Sbjct: 131 EPQIVELRNQ 124

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7017401.16.3e-123100.00Vacuolar protein-sorting-associated protein 37-like 2, partial [Cucurbita argyro... [more]
XP_022935552.12.0e-10589.80vacuolar protein-sorting-associated protein 37 homolog 1-like [Cucurbita moschat... [more]
XP_023529056.18.9e-10187.65vacuolar protein-sorting-associated protein 37 homolog 1-like [Cucurbita pepo su... [more]
XP_022983099.14.4e-10086.83vacuolar protein-sorting-associated protein 37 homolog 1-like [Cucurbita maxima][more]
XP_038904149.11.8e-9381.48vacuolar protein-sorting-associated protein 37 homolog 1-like [Benincasa hispida... [more]
Match NameE-valueIdentityDescription
Q9SCP92.1e-5756.61Vacuolar protein-sorting-associated protein 37 homolog 1 OS=Arabidopsis thaliana... [more]
Q3EBL96.2e-5754.88Vacuolar protein-sorting-associated protein 37 homolog 2 OS=Arabidopsis thaliana... [more]
Match NameE-valueIdentityDescription
A0A6J1F5W39.9e-10689.80vacuolar protein-sorting-associated protein 37 homolog 1-like OS=Cucurbita mosch... [more]
A0A6J1J6C42.1e-10086.83vacuolar protein-sorting-associated protein 37 homolog 1-like OS=Cucurbita maxim... [more]
A0A0A0LEC79.6e-9380.66VPS37 C-terminal domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G7... [more]
A0A1S3B6H01.3e-9280.25vacuolar protein-sorting-associated protein 37 homolog 2-like OS=Cucumis melo OX... [more]
A0A6J1CT751.6e-9280.57vacuolar protein-sorting-associated protein 37 homolog 1 OS=Momordica charantia ... [more]
Match NameE-valueIdentityDescription
AT3G53120.11.5e-5856.61Modifier of rudimentary (Mod(r)) protein [more]
AT2G36680.14.4e-5854.88Modifier of rudimentary (Mod(r)) protein [more]
AT2G36680.32.7e-3155.28Modifier of rudimentary (Mod(r)) protein [more]
AT2G36680.42.7e-3155.28Modifier of rudimentary (Mod(r)) protein [more]
AT2G36680.23.5e-3162.31Modifier of rudimentary (Mod(r)) protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 161..181
NoneNo IPR availableCOILSCoilCoilcoord: 97..117
NoneNo IPR availableCOILSCoilCoilcoord: 188..208
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..52
NoneNo IPR availablePANTHERPTHR13678:SF2VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37Acoord: 3..129
NoneNo IPR availablePANTHERPTHR13678WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATEDcoord: 151..244
coord: 3..129
NoneNo IPR availablePANTHERPTHR13678:SF2VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37Acoord: 151..244
IPR009851Modifier of rudimentary, ModrPFAMPF07200Mod_rcoord: 158..233
e-value: 3.3E-15
score: 56.5
coord: 67..130
e-value: 1.4E-11
score: 44.7
IPR009851Modifier of rudimentary, ModrPROSITEPS51314VPS37_Ccoord: 165..245
score: 16.233629
IPR029012Helix hairpin bin domain superfamilyGENE3D1.10.287.660Helix hairpin bincoord: 166..238
e-value: 2.2E-8
score: 36.1
IPR037202ESCRT assembly domainSUPERFAMILY140111Endosomal sorting complex assembly domaincoord: 180..233

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg03727-RACarg03727-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
cellular_component GO:0000813 ESCRT I complex