Carg03727 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGATCTCAAGAGGAACAGGTGCGTCCTCCACAACATGTTACCACACAGTCATGGTATCCACCCTCTGTTAGCTCCTCTCGCCCTGCAACCCCAGGTAGCACCTCCTCCAATCATTCCAGTTCACAAAGGCTTTCTGGTAGGCCACAGTCTCCATCACACGTTTCCCCTGCTGAAGCTGCCGGCATTATTTCTGCTTTGAAGGACAAAAGGTAAAGCTCAAGGTCCATGACTACAAAAAATTATGCTTGTGCCCACTGCTTTCCTTGATTCTCATTCATATTCAGAAGTTTATGGTTTTTGGATTATTTTTGTGCAGTTCGAGTTTCCTTTTTTTGGCTCTTTGTACCTATGTACCTTTTCAGTCAATGTTAGTGCCAAAATTTTTAATGCTTTTGAGGAGTGGAAAACCCACTCATCTTTTGTGTGTCTGTGTGTGTTTTAATAAGATTTGAACTTCATTAGTGAAATAAAGCTACATGTGTGTGTTTCTCGTCAAGGACGTTCTTTAAGTGATCATTCTTGTAAGTTAATATATGATGTTTGCATGTTTATAGGTACCGTTGTACAAATTTTTTTATTCAAATGCTTGTTATGATTCGAACCAGATTTCAATGTTCTTTATTTCGTCATTTCAGGATATTGATCCCTCTCTTTTTTCTCCCCTTTTAAATTTGGTCAGTGTTGATGAGTTGCGAAAGCTTTTGTCAGACAAGGATGCATATAATCAGTTCCTCCTTTCACTTGACCAGGTCAAAATTCAGAACAATGTAAGCTACAGTTTCTTCCCTTAGTTCAAGTTTAATTGGGTTGTTTTTGATAGAAGAGAACGAATATGTTCACCTGATGGTTCTCAAGTATCTCGAGCAGATTGTTTATTTAACTATTCATGCAGCCTTTCTATTTCTGATTCCATACTAGCAAATTGCGGAGTATTTTCCTCAGCTTTCCTAGTATACTGCTTGTAAGCATAGGATGTTCATCCTCTCTATTTTCATTATTTCAATGAATAGTTCATTTCTTTATCAAAGAAACAAACCGTTCTTAATCGATATTAAGATTTGCAGGATTTTCTTTCCTGTATTATATCTTTCCCGACTTCGATTATTTTCAATTAAAGGTGGGAGCTAGCAATATCTCAAGAATAGCATCATAGGATTGAGAGGAAACGTATGATTTTATAGAGGTGGAGAGGTCGTGTGATGAAGTTCGGGAGGTGGTGAGTTTCAATGCCTCCTCGTGCACTTCCATCACTAAACCTTTTGATAACTATGTGAATGAGATACAACTGAATTTAGCATAACTGACTCGTGTTACCGAGGAACTGTTTGCTTAACGATTTCTTATGTTTATCATGTGGTTTCTATAGTTGGTCCCTGTTATGTCTCTCTTTATGTAAACTGTTCCTGATTGGTTCCTTCTCTTTTTCATTTTTTTTATATGTCACCAGCTAAAAGATGAGCTGCGTAAGGAAACTCTTCAGCTTGCTAGTAAGTAACATTGCTTTTTTTCAGTGACTTTTATGCTTGCCTTTTCTTCTAAGCACATCTTTACGGGACAAATGTTAATCATGATATTAACTTGAAAAGGTGAGAACTTGGAAAAGGAACCACGCATCATGGAACTCAGAAACCAGGTATGGGTTTATCAGAAAATGGTGAATTCTCTTGCCCTTTATGCTACCTCCCTTTTGTTTATTCTCTCACAGTGCAGAATTATTCGGACAACGGAATTGGCAGCGGCCGAGGAGAAGCTAAACGAGCTTGACCGAAAGAAAGAGGACATTATGAAGCTCTGTTCTCCTGCTTCACTTCTCAAAAGGCTTCAAGGTATATCGTGATAGTCGTTATCGGATTTTGTGGTCACAAATTGGCTCAGATTATTGAAACGTTTTGTTTGCAGAGAGAATGAAAGAGACAGAAGAGGAGTCGGAGAAGGTGCACATGCAGCTCCTTGAGAGAGAGATAGATTTGAGTTCATTTACTCATAAATACAAGAAGCTGCGTATGGATTACCACCGGCGAGCTCTCATTCAACTTGCTGCCAGAACCACCTCAAACTAAACCGCACAATACTGATCACAGTGGCAGTGAGGTATATTCTTAACCGACAAAATTTATTGCCTTACTGCTACTGCTACAAGCTGTTCTCTTTCAGGGGTGGAGGTTGAAATCATTTGAATCATCCATCCCAGATGTGTTTTCTACCAGTTTGTGTGGGTTCGTTTTAGTGATGATAATAAGTTGATTCTTTTCACTTTGATGAATGGTTGTAAAGATGATATCTGTGCTGTTTTG GGATCTCAAGAGGAACAGGTGCGTCCTCCACAACATGTTACCACACAGTCATGGTATCCACCCTCTGTTAGCTCCTCTCGCCCTGCAACCCCAGGTAGCACCTCCTCCAATCATTCCAGTTCACAAAGGCTTTCTGGTAGGCCACAGTCTCCATCACACGTTTCCCCTGCTGAAGCTGCCGGCATTATTTCTGCTTTGAAGGACAAAAGTGTTGATGAGTTGCGAAAGCTTTTGTCAGACAAGGATGCATATAATCAGTTCCTCCTTTCACTTGACCAGGTCAAAATTCAGAACAATCTAAAAGATGAGCTGCGTAAGGAAACTCTTCAGCTTGCTAGTGAGAACTTGGAAAAGGAACCACGCATCATGGAACTCAGAAACCAGGTATGGGTTTATCAGAAAATGGTGAATTCTCTTGCCCTTTATGCTACCTCCCTTTTGTTTATTCTCTCACAGTGCAGAATTATTCGGACAACGGAATTGGCAGCGGCCGAGGAGAAGCTAAACGAGCTTGACCGAAAGAAAGAGGACATTATGAAGCTCTGTTCTCCTGCTTCACTTCTCAAAAGGCTTCAAGAGAGAATGAAAGAGACAGAAGAGGAGTCGGAGAAGGTGCACATGCAGCTCCTTGAGAGAGAGATAGATTTGAGTTCATTTACTCATAAATACAAGAAGCTGCGTATGGATTACCACCGGCGAGCTCTCATTCAACTTGCTGCCAGAACCACCTCAAACTAAACCGCACAATACTGATCACAGTGGCAGTGAGGTATATTCTTAACCGACAAAATTTATTGCCTTACTGCTACTGCTACAAGCTGTTCTCTTTCAGGGGTGGAGGTTGAAATCATTTGAATCATCCATCCCAGATGTGTTTTCTACCAGTTTGTGTGGGTTCGTTTTAGTGATGATAATAAGTTGATTCTTTTCACTTTGATGAATGGTTGTAAAGATGATATCTGTGCTGTTTTG GGATCTCAAGAGGAACAGGTGCGTCCTCCACAACATGTTACCACACAGTCATGGTATCCACCCTCTGTTAGCTCCTCTCGCCCTGCAACCCCAGGTAGCACCTCCTCCAATCATTCCAGTTCACAAAGGCTTTCTGGTAGGCCACAGTCTCCATCACACGTTTCCCCTGCTGAAGCTGCCGGCATTATTTCTGCTTTGAAGGACAAAAGTGTTGATGAGTTGCGAAAGCTTTTGTCAGACAAGGATGCATATAATCAGTTCCTCCTTTCACTTGACCAGGTCAAAATTCAGAACAATCTAAAAGATGAGCTGCGTAAGGAAACTCTTCAGCTTGCTAGTGAGAACTTGGAAAAGGAACCACGCATCATGGAACTCAGAAACCAGGTATGGGTTTATCAGAAAATGGTGAATTCTCTTGCCCTTTATGCTACCTCCCTTTTGTTTATTCTCTCACAGTGCAGAATTATTCGGACAACGGAATTGGCAGCGGCCGAGGAGAAGCTAAACGAGCTTGACCGAAAGAAAGAGGACATTATGAAGCTCTGTTCTCCTGCTTCACTTCTCAAAAGGCTTCAAGAGAGAATGAAAGAGACAGAAGAGGAGTCGGAGAAGGTGCACATGCAGCTCCTTGAGAGAGAGATAGATTTGAGTTCATTTACTCATAAATACAAGAAGCTGCGTATGGATTACCACCGGCGAGCTCTCATTCAACTTGCTGCCAGAACCACCTCAAACTAA GSQEEQVRPPQHVTTQSWYPPSVSSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAEAAGIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASENLEKEPRIMELRNQVWVYQKMVNSLALYATSLLFILSQCRIIRTTELAAAEEKLNELDRKKEDIMKLCSPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRMDYHRRALIQLAARTTSN Homology
BLAST of Carg03727 vs. NCBI nr
Match: KAG7017401.1 (Vacuolar protein-sorting-associated protein 37-like 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 451.1 bits (1159), Expect = 6.3e-123 Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0
BLAST of Carg03727 vs. NCBI nr
Match: XP_022935552.1 (vacuolar protein-sorting-associated protein 37 homolog 1-like [Cucurbita moschata] >KAG6580645.1 Vacuolar protein-sorting-associated protein 37-like 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 392.9 bits (1008), Expect = 2.0e-105 Identity = 220/245 (89.80%), Postives = 221/245 (90.20%), Query Frame = 0
BLAST of Carg03727 vs. NCBI nr
Match: XP_023529056.1 (vacuolar protein-sorting-associated protein 37 homolog 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 377.5 bits (968), Expect = 8.9e-101 Identity = 213/243 (87.65%), Postives = 215/243 (88.48%), Query Frame = 0
BLAST of Carg03727 vs. NCBI nr
Match: XP_022983099.1 (vacuolar protein-sorting-associated protein 37 homolog 1-like [Cucurbita maxima]) HSP 1 Score: 375.2 bits (962), Expect = 4.4e-100 Identity = 211/243 (86.83%), Postives = 215/243 (88.48%), Query Frame = 0
BLAST of Carg03727 vs. NCBI nr
Match: XP_038904149.1 (vacuolar protein-sorting-associated protein 37 homolog 1-like [Benincasa hispida]) HSP 1 Score: 353.2 bits (905), Expect = 1.8e-93 Identity = 198/243 (81.48%), Postives = 211/243 (86.83%), Query Frame = 0
BLAST of Carg03727 vs. ExPASy Swiss-Prot
Match: Q9SCP9 (Vacuolar protein-sorting-associated protein 37 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=VPS37-1 PE=1 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 2.1e-57 Identity = 137/242 (56.61%), Postives = 163/242 (67.36%), Query Frame = 0
BLAST of Carg03727 vs. ExPASy Swiss-Prot
Match: Q3EBL9 (Vacuolar protein-sorting-associated protein 37 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=VPS37-2 PE=1 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 6.2e-57 Identity = 135/246 (54.88%), Postives = 164/246 (66.67%), Query Frame = 0
BLAST of Carg03727 vs. ExPASy TrEMBL
Match: A0A6J1F5W3 (vacuolar protein-sorting-associated protein 37 homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111442393 PE=3 SV=1) HSP 1 Score: 392.9 bits (1008), Expect = 9.9e-106 Identity = 220/245 (89.80%), Postives = 221/245 (90.20%), Query Frame = 0
BLAST of Carg03727 vs. ExPASy TrEMBL
Match: A0A6J1J6C4 (vacuolar protein-sorting-associated protein 37 homolog 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481746 PE=3 SV=1) HSP 1 Score: 375.2 bits (962), Expect = 2.1e-100 Identity = 211/243 (86.83%), Postives = 215/243 (88.48%), Query Frame = 0
BLAST of Carg03727 vs. ExPASy TrEMBL
Match: A0A0A0LEC7 (VPS37 C-terminal domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G746590 PE=3 SV=1) HSP 1 Score: 349.7 bits (896), Expect = 9.6e-93 Identity = 196/243 (80.66%), Postives = 208/243 (85.60%), Query Frame = 0
BLAST of Carg03727 vs. ExPASy TrEMBL
Match: A0A1S3B6H0 (vacuolar protein-sorting-associated protein 37 homolog 2-like OS=Cucumis melo OX=3656 GN=LOC103486542 PE=3 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 1.3e-92 Identity = 195/243 (80.25%), Postives = 210/243 (86.42%), Query Frame = 0
BLAST of Carg03727 vs. ExPASy TrEMBL
Match: A0A6J1CT75 (vacuolar protein-sorting-associated protein 37 homolog 1 OS=Momordica charantia OX=3673 GN=LOC111014363 PE=3 SV=1) HSP 1 Score: 349.0 bits (894), Expect = 1.6e-92 Identity = 199/247 (80.57%), Postives = 210/247 (85.02%), Query Frame = 0
BLAST of Carg03727 vs. TAIR 10
Match: AT3G53120.1 (Modifier of rudimentary (Mod(r)) protein ) HSP 1 Score: 223.8 bits (569), Expect = 1.5e-58 Identity = 137/242 (56.61%), Postives = 163/242 (67.36%), Query Frame = 0
BLAST of Carg03727 vs. TAIR 10
Match: AT2G36680.1 (Modifier of rudimentary (Mod(r)) protein ) HSP 1 Score: 222.2 bits (565), Expect = 4.4e-58 Identity = 135/246 (54.88%), Postives = 164/246 (66.67%), Query Frame = 0
BLAST of Carg03727 vs. TAIR 10
Match: AT2G36680.3 (Modifier of rudimentary (Mod(r)) protein ) HSP 1 Score: 133.3 bits (334), Expect = 2.7e-31 Identity = 89/161 (55.28%), Postives = 103/161 (63.98%), Query Frame = 0
BLAST of Carg03727 vs. TAIR 10
Match: AT2G36680.4 (Modifier of rudimentary (Mod(r)) protein ) HSP 1 Score: 133.3 bits (334), Expect = 2.7e-31 Identity = 89/161 (55.28%), Postives = 103/161 (63.98%), Query Frame = 0
BLAST of Carg03727 vs. TAIR 10
Match: AT2G36680.2 (Modifier of rudimentary (Mod(r)) protein ) HSP 1 Score: 132.9 bits (333), Expect = 3.5e-31 Identity = 81/130 (62.31%), Postives = 90/130 (69.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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