Carg03683 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAGCGGTTGAGATTCCTCTTCAGATCCAGTTGCGAAGAACAAATTCATCGAATGCTGCGCTTTAGGTTTGCTTGATGGATCGAACCATGGAGGAGGAAGGTTGTTCGGTCTCCAAAGAAGTGGAAATGGCAGTCTGCATGGCTATGGCTCTGTTCTACGTCGCCGTTGTCCATTCTCCTGCTTTGATACTTCCGTCTATCACCTCCTCCTTCTCTTCAAGTTTACATGATTCGACGGTTTCTGTTCGCCATCATTTTCACCGCCGTCTCAGTCGTCGTCTGCGCTCTAATCCTTCCTGTAAGCCTCATTTACTTTTTTCCGGTCATTAATTTCTGAAAGGATGACTATATTGTTTGTATTTGTAATGCGTCTGCTCAGGAATCATCTCAACGTGGAATCACTTCTCCTTCTTCGAGTTTAACTGTTATTATTCGTTTATTTCTATCCGGAACAATCTTAAGAGAGAATAAACTATAAGGCTGTTTCGTTGTCAGGAAACGTGCGACTATGGTTCACCTAAGATAGAATGGTCAATCAATATCCTCGATAGACTGTTTAAGAATTATTTTATCATGTGAACTACAAGTAAACTAATCGGCATTTGTTAACATTATTATTTATGGTTTTAATTTGAAAAACGAAGTAGCTATTGATTTAGAAAACGAATTTTTCATCTATAACATGTAGTCGGGCTGTCAAGGTTGACTGATTAACGATCTGTTGGATCCATTGTATCTAATAGACCTGGGAACAAGAACTCCACACATACACAAACATAATAACCTTTCTCAATATTAAAGTGAACCAATTACTATAGAACATAAGATTAATCAATCAATCTATTTGGCAAATTAGAGATTTGAAATTGTTACTTTCTAATTACCATGCAAAGGAAGATATTATATAGACGCAACTTCTTGTTCGTAGTTCTATGAGTTTCAATTGTTCACAGGAATTTGTCACTCAGTGAAGCTTTATTAGTCTGATTATAAGTGCTTAGTCCGTAATTTACTTATTTGGTTGTGCCAGGTTTCCATCACAATGCTGACTTCCCCCATCTCATTTTGTTTCATGCTAGATAAGGAAAATGGAGTTTTCACTGTTATTAGCAGCTTGCGGTATCTGAGCAGATCATATTGTAAGTACCAATATTTTCTCCTCCATTAAATAATACGCCATGGCATTAGCTAAGGTTTTCTTTGACATTTTATTCAATTTTATAATCTTGTAGTCTGCATATTGGAAGGTGAAATGAATCCTAAACTTGCATCCTGAATTGCAATTTTATCTATAGAGCAGTGGCAAGCCGTGTTCTTTCCTCTTTCATTGACTTCTTTAATGTAGGTTGGATCAATGGTTTTAAAGTCTTTGTTATTGGTGGATTCATGGAGAGAGCATATGAATCACAGAGAAGGCTTCCTTTCGGACTGTGCTGAATTTTTTTGGACAAGAGTTCTTGATCGGGGACTATTAACAGTCTCAAATCCTTTAGCTTGGAGAAATTATGTTGTGGTGAGTACTCCTACAGTTTTTTCCATGCCATTTGGGTCCTCGTTGTTTCCCGCCTGTTTAAGAGCAAAGAGATCACTTATAGTTAGCTTTATTGTAGGCTTCTTGTGATGAGTAACAGCATGCTAGTATATATTCTTGAAGTATTTCTCTCAGCTGCCTTCCTTTCATATCCTGAGCAATGCTCTAGGCTTTACTTATTTGACAATTTTCTATGAGTAAGCTCCATGAGTTGGGTGGGAAAGAAAAATGTACGGCTTGGCTTTGCTCTAAATCTCACTTGCATACGTATTATATTCGAACTAGATAAGTAACGATAGTAACTTGATTTATGTGGTTACCTGAATCCTTGTACTCAATCACTGAAGATTCACAATTCGGTTGGGAAGACTTTCACTGATGTTCAATGTTCTGAATTCCACTTGGGAGTAAAAGATGCTGTTATTTTGAGTTTTTGAGTTGACCTATCTATAAAATTCAAATAGATGTCTTGTTTTCCTTGACACTAAGTAGCAAAGGTCATTAGATGTTAATAAATAATACTTTAAGCTGTGTCAAAGGAACCTTTTTTACTTGGATTTCTTGGTTGACATTGCATCACACATTCTTGGACAGGCTCCACTAACTGAGGAGTTGGTGTTTTGAGCATGCATGATACCAGTTCTTCTATCTGGGGGGATTTAAGCCAACCACTATGATCGTTCTCTGCTCCATTCTTTTCAGTCTGGGTAAGTTTTGATGCTTCATTGTTTTGGCAGATGAAACTGCTGCATGTATGAGTTTGTGCATGTAGCCTCATTTATTCATTTTGGGGCATGACTTTATGCTTCCCTGTACTATTTATTGTTTTTCTGGAATTCTTCATGTTTTCCCCTATTTATATGAAAGGGGAAAACATTGCAAGGGTTTAAGCTTAAGTTTTTCCCTTATTAAATGACCACTAGATTTGTATGCTATAAGCAAATTGATTTTAGCTGATGTTCTCACCAAACCTATTTATAGATGCTAATGGGAAGGGCGATGTTTAACTGACTCCTAATGTAAGCAATTATTTGTATTAATGTTAAGAGTACAGGGTAGGACAATATCTTTTGGTGCTTTCCTTTAGAACTTTCGTTCCAAGAGTTCTGTAATGTATATCCTTCTTTGAGAATTTCCAATTGGAATGTTTTCTCGCGGTTGAATGGAAGTAGCTTCTTTCTAGTCCATAACTTTCAATGATATGTGTGTATGTATGTATATTCCCCTTCCCGGAAAGGAAGAAATGACATCTAAGATAGTTTTTTGGACTTGGTTCACAAAGCCAGCCACTAATGTTTATGCATTTATAACCATTGCAACTGAGGGTGGATTTGTTGGAAATTGGATGTGTTTAGTATACCTTCTAGTTTAAGCATTTTTTGAAAAAATATATTTTCGACAGAAATGTTTTATGCCTTACATTTTTTTTTTTAAATGGCTTAAAAGTGATTACATTGACTATTAATATGCTTTGTTTTCATACTACATATTTTGAAGATTTTTAGTTGATGATTGTAAATTCATTTATGGATAATGCATCTCTCTGTTTCTTAGAAAAGAGTTTTTAAAATTAATCCAACTTTCTGAAGTGTTTTTATTTATTTATTAAGATAATATTTTAAAAAAGAACATTTTGGATCATGGAAAGGCAAACCAGACACTTCAATTATTAATTTTTTCTAAGGTGTTTATAGAAAATTTTGATAATATTATACCAAGCACACTAGAAGTCTGTTATGAAGAAATGTCACTAATGCCGGGATATTCCTTGCAGGCAATCTTCTTGCCCCGTTAGTTGCTCATGTTTTTTGCAACCTTATGGGATTATCTGCTTTTTTTTCTCAAAGAAGAGGTACGTTTTATATTTTTGTGATCTGAGTTCATCAATAACCCATGAATCATGATAATAAAAGAATCAAACTTATTCCCCTTCGCCTCTTTGTACAGGAGAAATATGTTCCAAATTTCTCATATTTATTACAATTCCATATGGCTACACTGATCTGTTCGCGACCTTGCTTTCTAAGAAGGTTCTCTCTGTGTTCATTGTCTAAATGCAAATAAGTGGTTGATATGGCGGTTAATGTCCGCGAAAAAGAATGTTGGAAGTTAAAACAATGATGGATCACTCTGTCTAGTACACAGGTCATTCTCATTTAGGATTGGATTTGAGTCCATAGAGGAAGTTCAATTGTTATAGGTTCATTCATAAGAATTCTTAAATTTTTCTCCAAATTAAATTCCACATGCAGCAATGCACCTTGTGGAATATAATAAGCTGAACTTAACCCTTTGTGCTAAATTTCTGTTTTGGACACTTCTTTTTTCTTTGTTTATTTCTGTTTGTGAATTTAACTTCGAATTGAAGATATCTTTATCTAAACATCCAGAGGTGGTGAGCCTGGCATTTCTAGTTGGAAAGGCGGGGGGTTCCTATGGTCTGTTTTTCCCATGACAAGTCCACATTTGTTTAATGAGAGAACAAACATCTGTAGGTGTTGGCATGGATATTGCACTTGGAATTAGACTGAAAAATCTTCCGAGAAAATAATCTTACTGTAGATTAGACAGAGAGTTGGGACGAAGAGAGAAAGAAAGAGAAAGAGAAAGAAGTAGAAGAAGATGTGTTACTGTATCTACATTCTGCTGTATTGACCAATGTGCCAAGGCTGTTTATTGGGTATAAAACCTAAGAATATATCTTCTCTTGCCTGTGAGTTGTAATGGAACAAGAATTAGAAAATACAAGGAATTCAATGATTAAAAGACATTATTGATTGTTGTTTGAATGAAGGTGTTAGGCATCGAAGGATGTTGTTTTGGACCAAAGCAAGAAAAAAGGTTTGCGTACTGAACCAGTTTCCATTCAGCTTCTGAAACCCTTCCACTCTTGTAGATATTGTAATGATGGCCCCAAATCCGTAGGGTACCCTGCAAATTGAGGATCTACCCCCATTAAGTTATCTACATCTTGTTTAAGTCGAACATCCTCCTTAAAGTTGCAAGAATTTCCATTGAAATTTCATGGAAATAGTGAAGGAGAAAGCAGATATATGTCATACCGTATTTTGATCTCATATCATGTTAGTAGTGGGAATATGTTCGGAGTATAAGATTTTCAAGTTCTTTTTCATAGTTTATTTCTTCAAATGATCTTCTAGAATTACTTAAGTGGTTTCTTTCATTTTGAAAATTGTGGGACTGTAAATAGTGGTCGGATAAACTCGATCTTATGAAACTTGTACATACAGGTCTTTACGAGTTAGACTTTACTAGATTCTCACAGCATGTTCTTTTATTCAATCCATACATTATTAGATAAAGTTAGACATTTTAGTATTGAACTTATTGAAATGGTGAGTCAAATACTGAATGGGGTTAAGTTAGAAATCTTGAGCATGGTCAGAAAATCAAAGAAACAAGCCAAGAGAAGAAGGAAAATCTGAGGAAAATGATGACTATCTATGATGGTTTAAATGGACCAATTTGCTTGTTTTCCATGAAGGAAGAGAAATTCAAATGGGTCATCATTTCTTTGCCTTTCTTCTCAAATTTGATCTCAATGAGTTCTTGAAGCCTCAGAGGCAGGGCCTAGAACAAACAGCCTCAAGCTAGGCCTGTAATTCAATGGAGTTTTGGATTGGACATTGTTCTTTATGATATCTTTATCTATTATATATTTCTTCTTTTTCTTCATTTAAAAAAAAAAAAACTAATAATAATGGTCAACCTGGCAACACAGAGCTACGTCATGTCCATGGGTTTCATATTTTATTGCCTTTTTTTTATAGATTTTTTTCCAAAATTTAATGAACTCTTTCATTGACTTTTTCATTTGATTTTTTTACTCTCTTTTTTGTGTGTGTCTGTGATGACGTTTACCTACTGATTAGATCCTCCCATCACTTTCTTCTCAGATGGAATCCGAATGAAAAGCCCCCTTTCTTTTCTTTCATTTATTTTGCATTCTTTTAAAATTTATTGGGAGAAGTCATTAAATTGTGTACTAATTTTCAATCTTCATTTTATAACTTTTGGTTTAATGTTAATGCAAAATGAAATATGAAAAAACAGTATATTTTTAGTTCTTGAAATCTTTCTTTGTGTCAAGTTTTACTTTTAGAAACTTATTAAAACTATTTCTCGAAGTAAAAGTGTTGCATTTGAAAATTTCAGGAGCATGAAGATGAAGCTTTTTCCGATCTCAAGAAACTCGATCAGAGGTAA AAAGCGGTTGAGATTCCTCTTCAGATCCAGTTGCGAAGAACAAATTCATCGAATGCTGCGCTTTAGGTTTGCTTGATGGATCGAACCATGGAGGAGGAAGGTTGTTCGGTCTCCAAAGAAGTGGAAATGGCAGTCTGCATGGCTATGGCTCTGTTCTACGTCGCCGTTGTCCATTCTCCTGCTTTGATACTTCCGTCTATCACCTCCTCCTTCTCTTCAAGTTTACATGATTCGACGGTTTCTGTTCGCCATCATTTTCACCGCCGTCTCAGTCGTCGTCTGCGCTCTAATCCTTCCTATAAGGAAAATGGAGTTTTCACTGTTGGATCAATGGTTTTAAAGTCTTTGTTATTGGTGGATTCATGGAGAGAGCATATGAATCACAGAGAAGGCTTCCTTTCGGACTGTGCTGAATTTTTTTGGACAAGAGTTCTTGATCGGGGACTATTAACAGTCTCAAATCCTTTAGCTTGGAGAAATTATGTTGTGGTGAGTACTCCTACACTGTGTCAAAGGAACCTTTTTTACTTGGATTTCTTGGTTGACATTGCATCACACATTCTTGGACAGGCTCCACTAACTGAGGAGTTGTTCTTCTATCTGGGGGGATTTAAGCCAACCACTATGATCGTTCTCTGCTCCATTCTTTTCAGTCTGGCAATGCACCTTGTGGAATATAATAAGCTGAACTTAACCCTTTGTGCTAAATTTCTGTTTTGGACACTTCTTTTTTCTTTGTTTATTTCTGTTTGTGAATTTAACTTCGAATTGAAGATATCTTTATCTAAACATCCAGAGGTGGTGAGCCTGGCATTTCTAGTTGGAAAGGCGGGGGGTTCCTATGAGAGTTGGGACGAAGAGAGAAAGAAAGAGAAAGAGAAAGAAGTAGAAGAAGATGAGCATGAAGATGAAGCTTTTTCCGATCTCAAGAAACTCGATCAGAGGTAA ATGGATCGAACCATGGAGGAGGAAGGTTGTTCGGTCTCCAAAGAAGTGGAAATGGCAGTCTGCATGGCTATGGCTCTGTTCTACGTCGCCGTTGTCCATTCTCCTGCTTTGATACTTCCGTCTATCACCTCCTCCTTCTCTTCAAGTTTACATGATTCGACGGTTTCTGTTCGCCATCATTTTCACCGCCGTCTCAGTCGTCGTCTGCGCTCTAATCCTTCCTATAAGGAAAATGGAGTTTTCACTGTTGGATCAATGGTTTTAAAGTCTTTGTTATTGGTGGATTCATGGAGAGAGCATATGAATCACAGAGAAGGCTTCCTTTCGGACTGTGCTGAATTTTTTTGGACAAGAGTTCTTGATCGGGGACTATTAACAGTCTCAAATCCTTTAGCTTGGAGAAATTATGTTGTGGTGAGTACTCCTACACTGTGTCAAAGGAACCTTTTTTACTTGGATTTCTTGGTTGACATTGCATCACACATTCTTGGACAGGCTCCACTAACTGAGGAGTTGTTCTTCTATCTGGGGGGATTTAAGCCAACCACTATGATCGTTCTCTGCTCCATTCTTTTCAGTCTGGCAATGCACCTTGTGGAATATAATAAGCTGAACTTAACCCTTTGTGCTAAATTTCTGTTTTGGACACTTCTTTTTTCTTTGTTTATTTCTGTTTGTGAATTTAACTTCGAATTGAAGATATCTTTATCTAAACATCCAGAGGTGGTGAGCCTGGCATTTCTAGTTGGAAAGGCGGGGGGTTCCTATGAGAGTTGGGACGAAGAGAGAAAGAAAGAGAAAGAGAAAGAAGTAGAAGAAGATGAGCATGAAGATGAAGCTTTTTCCGATCTCAAGAAACTCGATCAGAGGTAA MDRTMEEEGCSVSKEVEMAVCMAMALFYVAVVHSPALILPSITSSFSSSLHDSTVSVRHHFHRRLSRRLRSNPSYKENGVFTVGSMVLKSLLLVDSWREHMNHREGFLSDCAEFFWTRVLDRGLLTVSNPLAWRNYVVVSTPTLCQRNLFYLDFLVDIASHILGQAPLTEELFFYLGGFKPTTMIVLCSILFSLAMHLVEYNKLNLTLCAKFLFWTLLFSLFISVCEFNFELKISLSKHPEVVSLAFLVGKAGGSYESWDEERKKEKEKEVEEDEHEDEAFSDLKKLDQR Homology
BLAST of Carg03683 vs. NCBI nr
Match: KAG7017445.1 (hypothetical protein SDJN02_19310 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 565.5 bits (1456), Expect = 2.7e-157 Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0
BLAST of Carg03683 vs. NCBI nr
Match: KAG6580688.1 (hypothetical protein SDJN03_20690, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 164.9 bits (416), Expect = 1.1e-36 Identity = 97/138 (70.29%), Postives = 104/138 (75.36%), Query Frame = 0
BLAST of Carg03683 vs. NCBI nr
Match: XP_038905654.1 (CAAX prenyl protease 2 isoform X2 [Benincasa hispida]) HSP 1 Score: 147.5 bits (371), Expect = 1.8e-31 Identity = 126/310 (40.65%), Postives = 151/310 (48.71%), Query Frame = 0
BLAST of Carg03683 vs. NCBI nr
Match: XP_038905653.1 (CAAX prenyl protease 2 isoform X1 [Benincasa hispida]) HSP 1 Score: 145.6 bits (366), Expect = 6.7e-31 Identity = 106/234 (45.30%), Postives = 125/234 (53.42%), Query Frame = 0
BLAST of Carg03683 vs. NCBI nr
Match: XP_023540905.1 (CAAX prenyl protease 2 [Cucurbita pepo subsp. pepo] >KAG6596563.1 CAAX prenyl protease 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 142.9 bits (359), Expect = 4.3e-30 Identity = 124/310 (40.00%), Postives = 150/310 (48.39%), Query Frame = 0
BLAST of Carg03683 vs. ExPASy Swiss-Prot
Match: Q8GW19 (CAAX prenyl protease 2 OS=Arabidopsis thaliana OX=3702 GN=FACE2 PE=2 SV=2) HSP 1 Score: 50.8 bits (120), Expect = 2.9e-05 Identity = 64/252 (25.40%), Postives = 103/252 (40.87%), Query Frame = 0
BLAST of Carg03683 vs. ExPASy TrEMBL
Match: A0A6J1EF54 (CAAX prenyl protease 2 OS=Cucurbita moschata OX=3662 GN=LOC111433731 PE=3 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 1.8e-29 Identity = 123/310 (39.68%), Postives = 149/310 (48.06%), Query Frame = 0
BLAST of Carg03683 vs. ExPASy TrEMBL
Match: A0A6J1L025 (CAAX prenyl protease 2 OS=Cucurbita maxima OX=3661 GN=LOC111498632 PE=3 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 2.3e-29 Identity = 123/310 (39.68%), Postives = 148/310 (47.74%), Query Frame = 0
BLAST of Carg03683 vs. ExPASy TrEMBL
Match: A0A6J1CU25 (CAAX prenyl protease 2 OS=Momordica charantia OX=3673 GN=LOC111014343 PE=3 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 3.4e-28 Identity = 118/310 (38.06%), Postives = 149/310 (48.06%), Query Frame = 0
BLAST of Carg03683 vs. ExPASy TrEMBL
Match: A0A0A0LAV7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G776320 PE=3 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 7.5e-28 Identity = 122/310 (39.35%), Postives = 146/310 (47.10%), Query Frame = 0
BLAST of Carg03683 vs. ExPASy TrEMBL
Match: A0A1S3B6N0 (CAAX prenyl protease 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486598 PE=3 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 4.1e-26 Identity = 118/310 (38.06%), Postives = 141/310 (45.48%), Query Frame = 0
BLAST of Carg03683 vs. TAIR 10
Match: AT2G36305.1 (farnesylated protein-converting enzyme 2 ) HSP 1 Score: 50.8 bits (120), Expect = 2.1e-06 Identity = 64/252 (25.40%), Postives = 103/252 (40.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|