Carg03682 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03682
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein YIP
Location	Carg_Chr14: 1316642 .. 1317400 (+)
RNA-Seq Expression	Carg03682
Synteny	Carg03682

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGACGGTGAAGAAGGAGTTCGCTGTACCACCGGTGGTTTTCCCCTCTGGCGGCAACCCCAATCTTCACCAACGGGGTGTGGCGACGGCGCCATTTCAGCCTCCTCGGTCGACCGGCTCCAGCATTCCGTTTATGTCCTTCGACATCGGATCCGCCGCCGCTGCTTCCACGTCCTCTGGCGGTATCTATGGAGGTCCTATCGGTGGCGGGTCTGTCCCTGGTGGTGCTAATTTCGAAGACGAAGAACCCCTCCTCGATGAACTCGGGATCCACCCGGATCAAATCTGGAAGAAAACCAAGTCGATCTTGAATCCGTTCCGGGTCAAACCCGATGTGCACAAGGACTCGGATTTGTCCGGACCGATTCTCCTATACATGTTCTTCGGCCTCTTCCAGTTGCTCGCCGGCAAGATCCAATTTGGCGTGATACTGGGATGGATCGTGGTTTCTTCCATCTTCCTGTATGTCGTGTTCAATATGTTGGCTGGACGAAATGGTAATTTGAACCTTCACACATGTACTAGCGTAGTTGGGTACTGTATGTTGCCTGTTGTGGTTTTTTCGGCCGTGTCTTTGTTCCTGCCGCAAGCCGGTATATTGAGATCCGGAGTCGCCGGAGTTTTCGTGTTGTGGGCAACTAGGATCTGTACGAGTCTCATGGTTTCTCTTGCCGATGGTGGGGATGAGCACCGTGGGTTGATAGCATATGCTTGTTTTTTGATTTTCACTCTCTTTTCGTTGTTAGTTATATTTTAG

mRNA sequence

ATGGGGACGGTGAAGAAGGAGTTCGCTGTACCACCGGTGGTTTTCCCCTCTGGCGGCAACCCCAATCTTCACCAACGGGGTGTGGCGACGGCGCCATTTCAGCCTCCTCGGTCGACCGGCTCCAGCATTCCGTTTATGTCCTTCGACATCGGATCCGCCGCCGCTGCTTCCACGTCCTCTGGCGGTATCTATGGAGGTCCTATCGGTGGCGGGTCTGTCCCTGGTGGTGCTAATTTCGAAGACGAAGAACCCCTCCTCGATGAACTCGGGATCCACCCGGATCAAATCTGGAAGAAAACCAAGTCGATCTTGAATCCGTTCCGGGTCAAACCCGATGTGCACAAGGACTCGGATTTGTCCGGACCGATTCTCCTATACATGTTCTTCGGCCTCTTCCAGTTGCTCGCCGGCAAGATCCAATTTGGCGTGATACTGGGATGGATCGTGGTTTCTTCCATCTTCCTGTATGTCGTGTTCAATATGTTGGCTGGACGAAATGGTAATTTGAACCTTCACACATGTACTAGCGTAGTTGGGTACTGTATGTTGCCTGTTGTGGTTTTTTCGGCCGTGTCTTTGTTCCTGCCGCAAGCCGGTATATTGAGATCCGGAGTCGCCGGAGTTTTCGTGTTGTGGGCAACTAGGATCTGTACGAGTCTCATGGTTTCTCTTGCCGATGGTGGGGATGAGCACCGTGGGTTGATAGCATATGCTTGTTTTTTGATTTTCACTCTCTTTTCGTTGTTAGTTATATTTTAG

Coding sequence (CDS)

ATGGGGACGGTGAAGAAGGAGTTCGCTGTACCACCGGTGGTTTTCCCCTCTGGCGGCAACCCCAATCTTCACCAACGGGGTGTGGCGACGGCGCCATTTCAGCCTCCTCGGTCGACCGGCTCCAGCATTCCGTTTATGTCCTTCGACATCGGATCCGCCGCCGCTGCTTCCACGTCCTCTGGCGGTATCTATGGAGGTCCTATCGGTGGCGGGTCTGTCCCTGGTGGTGCTAATTTCGAAGACGAAGAACCCCTCCTCGATGAACTCGGGATCCACCCGGATCAAATCTGGAAGAAAACCAAGTCGATCTTGAATCCGTTCCGGGTCAAACCCGATGTGCACAAGGACTCGGATTTGTCCGGACCGATTCTCCTATACATGTTCTTCGGCCTCTTCCAGTTGCTCGCCGGCAAGATCCAATTTGGCGTGATACTGGGATGGATCGTGGTTTCTTCCATCTTCCTGTATGTCGTGTTCAATATGTTGGCTGGACGAAATGGTAATTTGAACCTTCACACATGTACTAGCGTAGTTGGGTACTGTATGTTGCCTGTTGTGGTTTTTTCGGCCGTGTCTTTGTTCCTGCCGCAAGCCGGTATATTGAGATCCGGAGTCGCCGGAGTTTTCGTGTTGTGGGCAACTAGGATCTGTACGAGTCTCATGGTTTCTCTTGCCGATGGTGGGGATGAGCACCGTGGGTTGATAGCATATGCTTGTTTTTTGATTTTCACTCTCTTTTCGTTGTTAGTTATATTTTAG

Protein sequence

MGTVKKEFAVPPVVFPSGGNPNLHQRGVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSGGIYGGPIGGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVFSAVSLFLPQAGILRSGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACFLIFTLFSLLVIF

Homology

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BLAST of Carg03682 vs. NCBI nr
Match: XP_022935627.1 (protein YIPF5 homolog isoform X1 [Cucurbita moschata] >KAG7017446.1 Protein YIPF5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 497.7 bits (1280), Expect = 6.0e-137
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLHQRGVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60
           MGTVKKEFAVPPVVFPSGGNPNLHQRGVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLHQRGVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60

Query: 61  GGIYGGPIGGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLS 120
           GGIYGGPIGGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLS
Sbjct: 61  GGIYGGPIGGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLS 120

Query: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180
           GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY
Sbjct: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180

Query: 181 CMLPVVVFSAVSLFLPQAGILRSGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240
           CMLPVVVFSAVSLFLPQAGILRSGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF
Sbjct: 181 CMLPVVVFSAVSLFLPQAGILRSGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240

Query: 241 LIFTLFSLLVIF 253
           LIFTLFSLLVIF
Sbjct: 241 LIFTLFSLLVIF 252

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BLAST of Carg03682 vs. NCBI nr
Match: XP_023526251.1 (protein YIPF5 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 496.1 bits (1276), Expect = 1.8e-136
Identity = 251/252 (99.60%), Postives = 251/252 (99.60%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLHQRGVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60
           MGTVKKEFAVPPVVFPSGGNPNLHQRGVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLHQRGVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60

Query: 61  GGIYGGPIGGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLS 120
           GGIYGGPIGGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLS
Sbjct: 61  GGIYGGPIGGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLS 120

Query: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180
           GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY
Sbjct: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180

Query: 181 CMLPVVVFSAVSLFLPQAGILRSGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240
           CM PVVVFSAVSLFLPQAGILRSGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF
Sbjct: 181 CMFPVVVFSAVSLFLPQAGILRSGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240

Query: 241 LIFTLFSLLVIF 253
           LIFTLFSLLVIF
Sbjct: 241 LIFTLFSLLVIF 252

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BLAST of Carg03682 vs. NCBI nr
Match: XP_022983078.1 (protein YIPF5 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 495.4 bits (1274), Expect = 3.0e-136
Identity = 251/252 (99.60%), Postives = 251/252 (99.60%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLHQRGVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60
           MGTVKKEFAVPPVVFPSGGNPNLHQRGVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLHQRGVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60

Query: 61  GGIYGGPIGGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLS 120
           GGIYGGPIGGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLS
Sbjct: 61  GGIYGGPIGGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLS 120

Query: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180
           GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY
Sbjct: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180

Query: 181 CMLPVVVFSAVSLFLPQAGILRSGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240
           CMLPVVVFSAVSLFLPQAGILR GVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF
Sbjct: 181 CMLPVVVFSAVSLFLPQAGILRFGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240

Query: 241 LIFTLFSLLVIF 253
           LIFTLFSLLVIF
Sbjct: 241 LIFTLFSLLVIF 252

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BLAST of Carg03682 vs. NCBI nr
Match: XP_022144590.1 (protein YIPF5 homolog isoform X1 [Momordica charantia] >XP_022144591.1 protein YIPF5 homolog isoform X2 [Momordica charantia] >XP_022144592.1 protein YIPF5 homolog isoform X3 [Momordica charantia])

HSP 1 Score: 478.4 bits (1230), Expect = 3.8e-131
Identity = 243/252 (96.43%), Postives = 245/252 (97.22%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLHQRGVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60
           MGTVKKEFAVPPVVFPSGGNPNL QR VATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60

Query: 61  GGIYGGPIGGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLS 120
            GIYGGPIGGGS+PGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLS
Sbjct: 61  AGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLS 120

Query: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180
           GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY
Sbjct: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180

Query: 181 CMLPVVVFSAVSLFLPQAGILRSGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240
           CMLPVVV SAVSLFLPQ GI+R  VAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF
Sbjct: 181 CMLPVVVLSAVSLFLPQTGIVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240

Query: 241 LIFTLFSLLVIF 253
           LIFTLFSLLVIF
Sbjct: 241 LIFTLFSLLVIF 252

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BLAST of Carg03682 vs. NCBI nr
Match: XP_008442831.1 (PREDICTED: protein YIPF5 homolog [Cucumis melo])

HSP 1 Score: 478.0 bits (1229), Expect = 5.0e-131
Identity = 244/253 (96.44%), Postives = 246/253 (97.23%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLHQ-RGVATAPFQPPRSTGSSIPFMSFDIGSAAAASTS 60
           MGTVKKEFAVPPVVFPSGGNPNL Q RGVATAPFQPPR TGSSIPFMSFDIGSAAAASTS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTS 60

Query: 61  SGGIYGGPIGGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120
           SG IYGGPIGGGS+PGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL
Sbjct: 61  SGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120

Query: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180
           SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG
Sbjct: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180

Query: 181 YCMLPVVVFSAVSLFLPQAGILRSGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240
           YCMLPVVV SAVSLFLPQAG+LR  VAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC
Sbjct: 181 YCMLPVVVLSAVSLFLPQAGLLRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240

Query: 241 FLIFTLFSLLVIF 253
           FLIFTLFSLLVIF
Sbjct: 241 FLIFTLFSLLVIF 253

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BLAST of Carg03682 vs. ExPASy Swiss-Prot
Match: Q66KA5 (Protein YIPF5 OS=Xenopus tropicalis OX=8364 GN=yipf5 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-24
Identity = 61/178 (34.27%), Postives = 112/178 (62.92%), Query Frame = 0


Query: 76  GANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKP-DVHKDSDLSGPILLYMFFGLFQL 135
           G+ F+DE PLL+ELGI+ D IW+KT ++L+P +V   ++  ++DL+GP++  + FG   L
Sbjct: 82  GSTFDDEPPLLEELGINFDHIWQKTLTVLHPLKVADGNIMNETDLAGPMVFCLAFGATLL 141

Query: 136 LAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVFSAVSLF 195
           LAGKIQFG + G   +  + +Y + N+++     ++    +SV+GYC+LP+++ S+ ++ 
Sbjct: 142 LAGKIQFGYVYGISAIGCLGMYCLLNLMS--MTGVSFGCVSSVLGYCLLPMIILSSFAVI 201

Query: 196 LPQAGILRSGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACFLIFTLFSLLVIF 253
               GIL   +A + + W +   + + +S A   D  + L+AY C L++ +F+L+ +F
Sbjct: 202 FSLQGILGIVLAALIIGWCSFSASKIFIS-ALAMDGQQVLVAYPCALLYGVFALISVF 256

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BLAST of Carg03682 vs. ExPASy Swiss-Prot
Match: Q7SXS2 (Protein YIPF5 OS=Xenopus laevis OX=8355 GN=yipf5 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.2e-24
Identity = 61/178 (34.27%), Postives = 110/178 (61.80%), Query Frame = 0


Query: 76  GANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKP-DVHKDSDLSGPILLYMFFGLFQL 135
           G+ F+DE PLL+ELGI+ D IW+KT ++L+P +V    +  ++DL+GP++  + FG   L
Sbjct: 82  GSTFDDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLL 141

Query: 136 LAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVFSAVSLF 195
           LAGKIQFG + G   +  + +Y + N+++     ++    +SV+GYC+LP+++ S  ++ 
Sbjct: 142 LAGKIQFGYVYGISAMGCLGMYCLLNLMS--MTGVSFGCVSSVLGYCLLPMIILSTFAVI 201

Query: 196 LPQAGILRSGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACFLIFTLFSLLVIF 253
               GIL   +A + + W +   + + +S A   D  + L+AY C L++ +F+L+ +F
Sbjct: 202 FSLQGILGIVLAALIIGWCSFSASKIFIS-ALAMDGQQLLVAYPCALLYGVFALISVF 256

[Close]

BLAST of Carg03682 vs. ExPASy Swiss-Prot
Match: Q8N8F6 (Protein YIPF7 OS=Homo sapiens OX=9606 GN=YIPF7 PE=1 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 4.2e-24
Identity = 61/176 (34.66%), Postives = 107/176 (60.80%), Query Frame = 0


Query: 78  NFEDEEPLLDELGIHPDQIWKKTKSILNPFR-VKPDVHKDSDLSGPILLYMFFGLFQLLA 137
           +F++E PLL+ELGIH D IW+KT ++LNP + V   +  ++DL+GPIL  +  G   LLA
Sbjct: 108 SFDEEPPLLEELGIHFDHIWQKTLTVLNPMKPVDGSIMNETDLTGPILFCVALGATLLLA 167

Query: 138 GKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVFSAVSLFLP 197
           GK+QFG + G   +  + ++ + N+++  +  ++     SV+GYC+LP+V+ S  ++F  
Sbjct: 168 GKVQFGYVYGMSAIGCLVIHALLNLMS--SSGVSYGCVASVLGYCLLPMVILSGCAMFFS 227

Query: 198 QAGILRSGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACFLIFTLFSLLVIF 253
             GI     + V + W +   + + ++ A   +  + L+AY C +++ LF+LL IF
Sbjct: 228 LQGIFGIMSSLVIIGWCSLSASKIFIA-ALHMEGQQLLVAYPCAILYGLFALLTIF 280

[Close]

BLAST of Carg03682 vs. ExPASy Swiss-Prot
Match: Q54QY3 (Protein YIPF5 homolog OS=Dictyostelium discoideum OX=44689 GN=yipf5 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 9.4e-24
Identity = 72/201 (35.82%), Postives = 119/201 (59.20%), Query Frame = 0


Query: 57  STSSGGIYG--GPIGGGSVPGGA--NFEDEEPLLDELGIHPDQIWKKTKSILNPF-RVKP 116
           ST  G  Y   G +GGG   GG   +F++E PLL+ELGI+ D I  KT S+LNP  ++  
Sbjct: 15  STPQGAYYDNTGRMGGGGGMGGPTDSFDNELPLLEELGINFDHIRSKTLSVLNPLKKIDS 74

Query: 117 DVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNL 176
            +  D+DL GPIL  +  G   L++GKIQFG I G  ++  + +Y+V N+++ +   +++
Sbjct: 75  HIMDDTDLGGPILFGLLLGFSLLMSGKIQFGYIYGLGLIGCVSMYIVLNLMSEK--GIDI 134

Query: 177 HTCTSVVGYCMLPVVVFSAVSLFLPQAGILRSGVAGVFVLWATRICTSLMVSLADGGDEH 236
           +   SV+GYC+LP++  S  SL +   G++   + G  ++W+T   + + V +    D+ 
Sbjct: 135 YRVISVLGYCLLPMIFLSFTSLIININGMVGYILIGFAIVWSTYSASKMFVKVLSMIDQ- 194

Query: 237 RGLIAYACFLIFTLFSLLVIF 253
           R L+AY   L++T F+L+  F
Sbjct: 195 RILVAYPVGLLYTGFALITAF 212

[Close]

BLAST of Carg03682 vs. ExPASy Swiss-Prot
Match: A5D7K7 (Protein YIPF7 OS=Bos taurus OX=9913 GN=YIPF7 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-23
Identity = 64/177 (36.16%), Postives = 107/177 (60.45%), Query Frame = 0


Query: 78  NFEDEEPLLDELGIHPDQIWKKTKSILNPFR-VKPDVHKDSDLSGPILLYMFFGLFQLLA 137
           +FE+E PLL+ELGI+ D IW+KT ++LNP +     +  ++DL+GPIL  M  G   LLA
Sbjct: 83  SFEEEPPLLEELGINFDHIWQKTLTVLNPMKPADGSIMNETDLTGPILFCMALGATLLLA 142

Query: 138 GKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVFSAVSLFLP 197
           GK+QFG + G   +  + ++ + N+++  +  ++     SV+GYC+LP+V+ S+ ++F  
Sbjct: 143 GKVQFGYVYGMSAIGCLGIHALLNLMS--SSGVSYGCVASVLGYCLLPMVILSSCAIFFS 202

Query: 198 QAGILRSGVAGVFVLWATRICTSLMVS-LADGGDEHRGLIAYACFLIFTLFSLLVIF 253
             G   +  A V + W +   + +  S LA  G +   LIAY C L++ LF+L+ +F
Sbjct: 203 LQGTFGTVSALVIIGWCSLSASKIFTSALAMEGQQL--LIAYPCALLYGLFALVTVF 255

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BLAST of Carg03682 vs. ExPASy TrEMBL
Match: A0A6J1F640 (Protein YIP OS=Cucurbita moschata OX=3662 GN=LOC111442433 PE=3 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 2.9e-137
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLHQRGVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60
           MGTVKKEFAVPPVVFPSGGNPNLHQRGVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLHQRGVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60

Query: 61  GGIYGGPIGGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLS 120
           GGIYGGPIGGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLS
Sbjct: 61  GGIYGGPIGGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLS 120

Query: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180
           GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY
Sbjct: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180

Query: 181 CMLPVVVFSAVSLFLPQAGILRSGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240
           CMLPVVVFSAVSLFLPQAGILRSGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF
Sbjct: 181 CMLPVVVFSAVSLFLPQAGILRSGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240

Query: 241 LIFTLFSLLVIF 253
           LIFTLFSLLVIF
Sbjct: 241 LIFTLFSLLVIF 252

[Close]

BLAST of Carg03682 vs. ExPASy TrEMBL
Match: A0A6J1J6R1 (Protein YIP OS=Cucurbita maxima OX=3661 GN=LOC111481733 PE=3 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 1.5e-136
Identity = 251/252 (99.60%), Postives = 251/252 (99.60%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLHQRGVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60
           MGTVKKEFAVPPVVFPSGGNPNLHQRGVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLHQRGVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60

Query: 61  GGIYGGPIGGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLS 120
           GGIYGGPIGGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLS
Sbjct: 61  GGIYGGPIGGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLS 120

Query: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180
           GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY
Sbjct: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180

Query: 181 CMLPVVVFSAVSLFLPQAGILRSGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240
           CMLPVVVFSAVSLFLPQAGILR GVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF
Sbjct: 181 CMLPVVVFSAVSLFLPQAGILRFGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240

Query: 241 LIFTLFSLLVIF 253
           LIFTLFSLLVIF
Sbjct: 241 LIFTLFSLLVIF 252

[Close]

BLAST of Carg03682 vs. ExPASy TrEMBL
Match: A0A6J1CU38 (Protein YIP OS=Momordica charantia OX=3673 GN=LOC111014238 PE=3 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 1.8e-131
Identity = 243/252 (96.43%), Postives = 245/252 (97.22%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLHQRGVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60
           MGTVKKEFAVPPVVFPSGGNPNL QR VATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60

Query: 61  GGIYGGPIGGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLS 120
            GIYGGPIGGGS+PGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLS
Sbjct: 61  AGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLS 120

Query: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180
           GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY
Sbjct: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180

Query: 181 CMLPVVVFSAVSLFLPQAGILRSGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240
           CMLPVVV SAVSLFLPQ GI+R  VAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF
Sbjct: 181 CMLPVVVLSAVSLFLPQTGIVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240

Query: 241 LIFTLFSLLVIF 253
           LIFTLFSLLVIF
Sbjct: 241 LIFTLFSLLVIF 252

[Close]

BLAST of Carg03682 vs. ExPASy TrEMBL
Match: A0A1S3B7C5 (Protein YIP OS=Cucumis melo OX=3656 GN=LOC103486599 PE=3 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 2.4e-131
Identity = 244/253 (96.44%), Postives = 246/253 (97.23%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLHQ-RGVATAPFQPPRSTGSSIPFMSFDIGSAAAASTS 60
           MGTVKKEFAVPPVVFPSGGNPNL Q RGVATAPFQPPR TGSSIPFMSFDIGSAAAASTS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTS 60

Query: 61  SGGIYGGPIGGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120
           SG IYGGPIGGGS+PGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL
Sbjct: 61  SGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120

Query: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180
           SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG
Sbjct: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180

Query: 181 YCMLPVVVFSAVSLFLPQAGILRSGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240
           YCMLPVVV SAVSLFLPQAG+LR  VAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC
Sbjct: 181 YCMLPVVVLSAVSLFLPQAGLLRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240

Query: 241 FLIFTLFSLLVIF 253
           FLIFTLFSLLVIF
Sbjct: 241 FLIFTLFSLLVIF 253

[Close]

BLAST of Carg03682 vs. ExPASy TrEMBL
Match: A0A0A0LGM5 (Protein YIP OS=Cucumis sativus OX=3659 GN=Csa_3G776330 PE=3 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 5.3e-131
Identity = 243/253 (96.05%), Postives = 246/253 (97.23%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLHQ-RGVATAPFQPPRSTGSSIPFMSFDIGSAAAASTS 60
           MGTVKKEFAVPPVVFPSGGNPNL Q RGVATAPFQPPR TGSSIPFMSFDIGSAAAASTS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTS 60

Query: 61  SGGIYGGPIGGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120
           SG IYGGPIGGGS+PGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL
Sbjct: 61  SGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120

Query: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180
           SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG
Sbjct: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180

Query: 181 YCMLPVVVFSAVSLFLPQAGILRSGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240
           YCMLPVVV SAVSLFLPQAG++R  VAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC
Sbjct: 181 YCMLPVVVLSAVSLFLPQAGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240

Query: 241 FLIFTLFSLLVIF 253
           FLIFTLFSLLVIF
Sbjct: 241 FLIFTLFSLLVIF 253

[Close]

BLAST of Carg03682 vs. TAIR 10
Match: AT2G36300.1 (Integral membrane Yip1 family protein )

HSP 1 Score: 362.5 bits (929), Expect = 2.8e-100
Identity = 191/253 (75.49%), Postives = 215/253 (84.98%), Query Frame = 0


Query: 6   KEFAVPPVVFPSGGN---PNLHQRGVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSGG 65
           K+FAVPPVVFPSGG+    N+ QR     PFQPPR + S+IPFMSFDIGSAAA+S +  G
Sbjct: 3   KDFAVPPVVFPSGGSSGGANVQQRRFPATPFQPPRPSSSAIPFMSFDIGSAAASSATPAG 62

Query: 66  IYGGPIGGGSVPGG--ANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLS 125
            +GG I   S  GG  A+FEDEEPLLDELGIHPDQIWKKT+SILNPFR+   VHKDSDLS
Sbjct: 63  PFGGTIASSSSFGGGSASFEDEEPLLDELGIHPDQIWKKTRSILNPFRINQAVHKDSDLS 122

Query: 126 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 185
           GPI LY+   LFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTS+VGY
Sbjct: 123 GPIFLYLALCLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSLVGY 182

Query: 186 CMLPVVVFSAVSLFLPQ-AGILRSGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 245
           C+LPVVV SAVSLF+PQ AG +R  +A +FVLW+TR C++L+VSLADGG+EHRGLIAYAC
Sbjct: 183 CLLPVVVLSAVSLFVPQGAGPVRFVLAALFVLWSTRACSTLVVSLADGGEEHRGLIAYAC 242

Query: 246 FLIFTLFSLLVIF 253
           FLI+TLFSLLVIF
Sbjct: 243 FLIYTLFSLLVIF 255

[Close]

BLAST of Carg03682 vs. TAIR 10
Match: AT3G52760.1 (Integral membrane Yip1 family protein )

HSP 1 Score: 332.4 bits (851), Expect = 3.1e-91
Identity = 178/257 (69.26%), Postives = 208/257 (80.93%), Query Frame = 0


Query: 6   KEFAVPPVVFPSGGN----PNLHQRGVATAPFQPPR--STGSSIPFMSFDIGSAAAASTS 65
           K+F +PPVVFP+ G+     N+ QR V TAP+QPPR  S  SSIPF+ F+IGSAA +  +
Sbjct: 3   KDFPIPPVVFPTSGSSPATANVQQRRVPTAPYQPPRQSSASSSIPFIPFEIGSAAVSMPA 62

Query: 66  SGGIYGGPIGGGSVPG---GANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKD 125
             G + G I   +  G    A+FEDEEPLLDELGIHPDQIWKKT+SILNPFR+   VHKD
Sbjct: 63  --GPFDGTIASSASFGRGVSASFEDEEPLLDELGIHPDQIWKKTRSILNPFRINQTVHKD 122

Query: 126 SDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTS 185
           SDLSGPI LY+   LFQLLAGKIQFGVILGW+VVSSIFLY+VFNMLAGRNGNLNLHTCTS
Sbjct: 123 SDLSGPIFLYLALCLFQLLAGKIQFGVILGWVVVSSIFLYIVFNMLAGRNGNLNLHTCTS 182

Query: 186 VVGYCMLPVVVFSAVSLFLPQ-AGILRSGVAGVFVLWATRICTSLMVSLADGGDEHRGLI 245
           +VGY +LPVV+ SAVSLF+PQ AG +R  +   FVLWATR C++L+VSLADGG+EHRGLI
Sbjct: 183 LVGYSLLPVVILSAVSLFVPQGAGPVRFVLGAAFVLWATRACSNLVVSLADGGEEHRGLI 242

Query: 246 AYACFLIFTLFSLLVIF 253
           +YACFLI+TLFSLLVIF
Sbjct: 243 SYACFLIYTLFSLLVIF 257

The following BLAST results are available for this feature:

BLAST of Carg03682 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935627.1	6.0e-137	100.00	protein YIPF5 homolog isoform X1 [Cucurbita moschata] >KAG7017446.1 Protein YIPF...	[more]
XP_023526251.1	1.8e-136	99.60	protein YIPF5 homolog isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022983078.1	3.0e-136	99.60	protein YIPF5 homolog isoform X1 [Cucurbita maxima]	[more]
XP_022144590.1	3.8e-131	96.43	protein YIPF5 homolog isoform X1 [Momordica charantia] >XP_022144591.1 protein Y...	[more]
XP_008442831.1	5.0e-131	96.44	PREDICTED: protein YIPF5 homolog [Cucumis melo]	[more]

BLAST of Carg03682 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q66KA5	1.1e-24	34.27	Protein YIPF5 OS=Xenopus tropicalis OX=8364 GN=yipf5 PE=2 SV=1	[more]
Q7SXS2	4.2e-24	34.27	Protein YIPF5 OS=Xenopus laevis OX=8355 GN=yipf5 PE=2 SV=1	[more]
Q8N8F6	4.2e-24	34.66	Protein YIPF7 OS=Homo sapiens OX=9606 GN=YIPF7 PE=1 SV=2	[more]
Q54QY3	9.4e-24	35.82	Protein YIPF5 homolog OS=Dictyostelium discoideum OX=44689 GN=yipf5 PE=3 SV=1	[more]
A5D7K7	1.2e-23	36.16	Protein YIPF7 OS=Bos taurus OX=9913 GN=YIPF7 PE=2 SV=1	[more]

BLAST of Carg03682 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F640	2.9e-137	100.00	Protein YIP OS=Cucurbita moschata OX=3662 GN=LOC111442433 PE=3 SV=1	[more]
A0A6J1J6R1	1.5e-136	99.60	Protein YIP OS=Cucurbita maxima OX=3661 GN=LOC111481733 PE=3 SV=1	[more]
A0A6J1CU38	1.8e-131	96.43	Protein YIP OS=Momordica charantia OX=3673 GN=LOC111014238 PE=3 SV=1	[more]
A0A1S3B7C5	2.4e-131	96.44	Protein YIP OS=Cucumis melo OX=3656 GN=LOC103486599 PE=3 SV=1	[more]
A0A0A0LGM5	5.3e-131	96.05	Protein YIP OS=Cucumis sativus OX=3659 GN=Csa_3G776330 PE=3 SV=1	[more]

BLAST of Carg03682 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36300.1	2.8e-100	75.49	Integral membrane Yip1 family protein	[more]
AT3G52760.1	3.1e-91	69.26	Integral membrane Yip1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006977	Yip1 domain	PFAM	PF04893	Yip1	coord: 127..249 e-value: 2.5E-8 score: 34.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..36
None	No IPR available	PANTHER	PTHR21236	GOLGI MEMBRANE PROTEIN YIP1	coord: 6..252
None	No IPR available	PANTHER	PTHR21236:SF21	PROTEIN YIPF	coord: 6..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03682-RA	Carg03682-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0010506	regulation of autophagy
biological_process	GO:0048280	vesicle fusion with Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031902	late endosome membrane
cellular_component	GO:0035658	Mon1-Ccz1 complex
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0016020	membrane