Carg03680 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03680
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	CEN-like protein 2
Location	Carg_Chr14: 1323147 .. 1325269 (-)
RNA-Seq Expression	Carg03680
Synteny	Carg03680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAGAAGTGTGTCTTCGGAGCCTCTTGTTGTTGGGAGAGTGATCGGAGATGTGCTTGATCCCTTCACCCAAAGCATGAAGATGACTGTTTCTTACAACAATAAGCAAGTCTTCAATGGCCATGAGTTCTTTCCTTCTGCTGTTGCTGCTAAACCTAAGGCTGAAATCCTTGGTGGTGACTTGAGATCTTTCTTCACTTTGGTGACATTTCTTCTTTCTCTCTCTATCGATTCTTCATTTCTATATACGATTTACCCCGATGTTTCTCTTTCTGTGTCTACGATTGACCCGATTGTACGTTATCAGATTAAAATTTCAAGTTGTTAACCTGAACGTAGCTCTCTAGTTTAAGACATGTCTCGGTCAAAAGTGTGAATTCTTCCTTGTTGAACAAAAAAAAAACTTTTTTTGAGTTGGGTTATTGTCTGTTTTGACCCGTTATGTATCACTGTTAGCTTTACGTTTTTAAAACGAGTTTGTTAGGGAGAGATTTTCACATCCTTATAAATAATGTTTCGTTCTTCTTTTCAATCGACGTGGGATCTCACAATCCACCCCTTTCAAGACCCAATATCCTCGTTGGCACACTGCTAAGTGCCTAGCTCTAATACTATTTGTAAAAGTATAGACCTACTGCTAATAGATGTTTGTTTTGACTCGTTACATATTGACGTTAGTCTCACGATTTTAAAATGCGTTTGTTAGGGAGAGGTTTCCACACCTTTATAGGGAATGTTTCGTTCCCCTCTTCAAATGATGTGAGACCTTATGCTACTCATACCTCAATTAGTCAAGACAGTATATCTTGAAGAAATTATTAAATTTATTATAATCTTTCATTCACCAATTTAAGTATAGATCAGTTACTCTGGTAGCGGGTAAGTTTTGAGAAATTATTGAAATATGTTCTCTCATCTCTCAATGATTTCATTTCATTTTTTCTTGTTTCAGGTTATGACAGACCCAGATGTTCCAGGACCGAGTGATCCTTATTTAAGAGAGCATTTACACTGGTAACTTTTTTTTTAACTAAAATTCACACTGGTAATTAAACATTTACAGTGTTACTGTCACAGTTACATTACAAATATTGCATGTGCATGAAACCCACCAAATTTGACTTGACAAGAATTAATACTGAGAGAATCGTTGTCGTGTTTTATTGTCGTTGGAGGATGAAATTCTCTTGGATTTTAGCGAATTTTGCTTATTTATTTTTCTTTCATTTTCATTTTCATGTAAACTAAATCAAATAACTTTTAATATAACCTATGGTTTGTCTTTTACATTTATTATAAGATATTTAAAAAAAAATACCACTATTATATAGTTGGAACTTGGAAGATCAGCATAATTAGTGGACTGGATTCCTTTGGTGTCTTAATTTAGACCAAATTTGTCAACTTTAAGCTTAATTTCAATTTTAGAAAAATTTAATACATGTCTTATTCAATATATATTGAGATGTCTTGAAGCCCTTCCATCCACGAGCAATATCATGACTATATTATTAGATAAATCTCTATTAATAAACTGATGTTTTGATTTTGAAACTATACTGTGCATTCACGTGCAGTACGATAAGAAACCACGTAGTTGTTAATGAAAGTTTTATTTGTTTGAATAATTATCCATTGATTTGTGTTAGTTTGTAAACTTTTAATATAATTTATCCAATATTGTATTGAATAATTATGCAGGATAGAAAATAAATAAATAATTTAACAACCGAACCAAAATAAAGAGGTGGATTGAGTTAGGTTGTGAAAAATTTCGAGTTGGGTTGGGTTACCAATCCAACCAACCTCAACTTTTGAGTTGATCCAAAAAACTCTCTCGACCCAACTCAACCCGACCCATTACACCCCTAATATTGCTTATATATATGTTAGTGTTTACGGTGCCTTGTGATAAGGAACTACCTAGGCTAGCAGCTAACTCCGATATGTAAAAGGTTCGTTTTTGTTCTGTTCAAACAGAAGCGAAGACAAACGGTGAGCGCACCCTCTTCAAGGGACCATTTCAGCACACGAATCTTCGCTGCCGAAAACGACCTCGGCGACCCCGTTGCTGCCGTCTACTTCAATGCTCAGAGAGAAACTGCCGCCAGACGACGCTAA

mRNA sequence

ATGGCAAGAAGTGTGTCTTCGGAGCCTCTTGTTGTTGGGAGAGTGATCGGAGATGTGCTTGATCCCTTCACCCAAAGCATGAAGATGACTGTTTCTTACAACAATAAGCAAGTCTTCAATGGCCATGAGTTCTTTCCTTCTGCTGTTGCTGCTAAACCTAAGGCTGAAATCCTTGGTGGTGACTTGAGATCTTTCTTCACTTTGGTTATGACAGACCCAGATAAGCGAAGACAAACGGTGAGCGCACCCTCTTCAAGGGACCATTTCAGCACACGAATCTTCGCTGCCGAAAACGACCTCGGCGACCCCGTTGCTGCCGTCTACTTCAATGCTCAGAGAGAAACTGCCGCCAGACGACGCTAA

Coding sequence (CDS)

ATGGCAAGAAGTGTGTCTTCGGAGCCTCTTGTTGTTGGGAGAGTGATCGGAGATGTGCTTGATCCCTTCACCCAAAGCATGAAGATGACTGTTTCTTACAACAATAAGCAAGTCTTCAATGGCCATGAGTTCTTTCCTTCTGCTGTTGCTGCTAAACCTAAGGCTGAAATCCTTGGTGGTGACTTGAGATCTTTCTTCACTTTGGTTATGACAGACCCAGATAAGCGAAGACAAACGGTGAGCGCACCCTCTTCAAGGGACCATTTCAGCACACGAATCTTCGCTGCCGAAAACGACCTCGGCGACCCCGTTGCTGCCGTCTACTTCAATGCTCAGAGAGAAACTGCCGCCAGACGACGCTAA

Protein sequence

MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGGDLRSFFTLVMTDPDKRRQTVSAPSSRDHFSTRIFAAENDLGDPVAAVYFNAQRETAARRR

Homology

[Close]

BLAST of Carg03680 vs. NCBI nr
Match: KAG7017448.1 (Protein SELF-PRUNING, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 239.6 bits (610), Expect = 1.4e-59
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGG 60
           MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGG
Sbjct: 1   MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGG 60

Query: 61  DLRSFFTLVMTDPDKRRQTVSAPSSRDHFSTRIFAAENDLGDPVAAVYFNAQRETAARRR 120
           DLRSFFTLVMTDPDKRRQTVSAPSSRDHFSTRIFAAENDLGDPVAAVYFNAQRETAARRR
Sbjct: 61  DLRSFFTLVMTDPDKRRQTVSAPSSRDHFSTRIFAAENDLGDPVAAVYFNAQRETAARRR 120

[Close]

BLAST of Carg03680 vs. NCBI nr
Match: KAG6580691.1 (Protein SELF-PRUNING, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 214.5 bits (545), Expect = 4.9e-52
Identity = 120/174 (68.97%), Postives = 120/174 (68.97%), Query Frame = 0


Query: 1   MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGG 60
           MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGG
Sbjct: 1   MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGG 60

Query: 61  DLRSFFTLVMTDPD---------------------------------------------- 120
           DLRSFFTLVMTDPD                                              
Sbjct: 61  DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREVISYETPRPNIGIHR 120

[Close]

BLAST of Carg03680 vs. NCBI nr
Match: XP_023528346.1 (protein SELF-PRUNING-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214.2 bits (544), Expect = 6.4e-52
Identity = 119/174 (68.39%), Postives = 120/174 (68.97%), Query Frame = 0


Query: 1   MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGG 60
           MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGG
Sbjct: 1   MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGG 60

Query: 61  DLRSFFTLVMTDPD---------------------------------------------- 120
           DLRSFFTLVMTDPD                                              
Sbjct: 61  DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREVISYETPRPNIGIHR 120

[Close]

BLAST of Carg03680 vs. NCBI nr
Match: XP_022935180.1 (protein SELF-PRUNING-like [Cucurbita moschata])

HSP 1 Score: 211.8 bits (538), Expect = 3.2e-51
Identity = 118/174 (67.82%), Postives = 119/174 (68.39%), Query Frame = 0


Query: 1   MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGG 60
           MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILG 
Sbjct: 1   MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGA 60

Query: 61  DLRSFFTLVMTDPD---------------------------------------------- 120
           DLRSFFTLVMTDPD                                              
Sbjct: 61  DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREVISYETPRPNIGIHR 120

[Close]

BLAST of Carg03680 vs. NCBI nr
Match: XP_022983119.1 (protein SELF-PRUNING-like [Cucurbita maxima])

HSP 1 Score: 208.0 bits (528), Expect = 4.6e-50
Identity = 116/174 (66.67%), Postives = 119/174 (68.39%), Query Frame = 0


Query: 1   MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGG 60
           MARSVSSEPLVVGRVIGDVLD FTQ+MKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGG
Sbjct: 1   MARSVSSEPLVVGRVIGDVLDSFTQTMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGG 60

Query: 61  DLRSFFTLVMTDPD---------------------------------------------- 120
           DLRSFFTLVMTDPD                                              
Sbjct: 61  DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREVISYETPKPNIGIHR 120

[Close]

BLAST of Carg03680 vs. ExPASy Swiss-Prot
Match: Q9ZNV5 (Protein CENTRORADIALIS-like OS=Arabidopsis thaliana OX=3702 GN=CEN PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.4e-33
Identity = 86/176 (48.86%), Postives = 100/176 (56.82%), Query Frame = 0


Query: 1   MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSYN-NKQVFNGHEFFPSAVAAKPKAEILG 60
           MAR +SS+PL+VGRVIGDV+D   Q++KMTV+YN +KQV+NGHE FPS V  KPK E+ G
Sbjct: 1   MAR-ISSDPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHG 60

Query: 61  GDLRSFFTLVMTDPD--------------------------------------------- 120
           GD+RSFFTLVMTDPD                                             
Sbjct: 61  GDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIH 120

[Close]

BLAST of Carg03680 vs. ExPASy Swiss-Prot
Match: Q9XH43 (CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.0e-32
Identity = 81/173 (46.82%), Postives = 101/173 (58.38%), Query Frame = 0


Query: 4   SVSSEPLVVGRVIGDVLDPFTQSMKMTVSYN-NKQVFNGHEFFPSAVAAKPKAEILGGDL 63
           S  S+PLV+GRVIG+V+D FT S+KM+V+YN +K V+NGHE FPS+V +KP+ E+ GGDL
Sbjct: 3   SKMSDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGGDL 62

Query: 64  RSFFTLVMTDPD------------------------------------------------ 121
           RSFFT++M DPD                                                
Sbjct: 63  RSFFTMIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGKEIVGYEMPRPNIGIHRFV 122

[Close]

BLAST of Carg03680 vs. ExPASy Swiss-Prot
Match: O82088 (Protein SELF-PRUNING OS=Solanum lycopersicum OX=4081 GN=SP PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.0e-32
Identity = 81/169 (47.93%), Postives = 98/169 (57.99%), Query Frame = 0


Query: 8   EPLVVGRVIGDVLDPFTQSMKMTVSY-NNKQVFNGHEFFPSAVAAKPKAEILGGDLRSFF 67
           EPLV+GRVIG+V+D F  S+KM+V Y NNK V+NGHEFFPS+V +KP+ E+ GGDLRSFF
Sbjct: 7   EPLVIGRVIGEVVDYFCPSVKMSVVYNNNKHVYNGHEFFPSSVTSKPRVEVHGGDLRSFF 66

Query: 68  TLVMTDPD---------------------------------------------------- 121
           TL+M DPD                                                    
Sbjct: 67  TLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREVVGYEMPRPNIGIHRFVFLLF 126

[Close]

BLAST of Carg03680 vs. ExPASy Swiss-Prot
Match: Q9XH42 (CEN-like protein 4 OS=Nicotiana tabacum OX=4097 GN=CET4 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 7.6e-32
Identity = 80/173 (46.24%), Postives = 100/173 (57.80%), Query Frame = 0


Query: 4   SVSSEPLVVGRVIGDVLDPFTQSMKMTVSYN-NKQVFNGHEFFPSAVAAKPKAEILGGDL 63
           S  S+PLV+GRVIG+V+D FT S+KM+V+YN +K V+NGHE FPS+V +KP+ E+ GGDL
Sbjct: 3   SKMSDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGGDL 62

Query: 64  RSFFTLVMTDPD------------------------------------------------ 121
           RSFFTL+M DPD                                                
Sbjct: 63  RSFFTLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREIVGYEMPRPNIGIHRFV 122

[Close]

BLAST of Carg03680 vs. ExPASy Swiss-Prot
Match: P93003 (Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana OX=3702 GN=TFL1 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.2e-31
Identity = 80/168 (47.62%), Postives = 96/168 (57.14%), Query Frame = 0


Query: 8   EPLVVGRVIGDVLDPFTQSMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGGDLRSFFT 67
           EPL++GRV+GDVLD FT + KM VSYN KQV NGHE FPS+V++KP+ EI GGDLRSFFT
Sbjct: 10  EPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLRSFFT 69

Query: 68  LVMTDPD----------------------------------------------------- 121
           LVM DPD                                                     
Sbjct: 70  LVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVLFR 129

[Close]

BLAST of Carg03680 vs. ExPASy TrEMBL
Match: A0A6J1F9W4 (protein SELF-PRUNING-like OS=Cucurbita moschata OX=3662 GN=LOC111442134 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.5e-51
Identity = 118/174 (67.82%), Postives = 119/174 (68.39%), Query Frame = 0


Query: 1   MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGG 60
           MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILG 
Sbjct: 1   MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGA 60

Query: 61  DLRSFFTLVMTDPD---------------------------------------------- 120
           DLRSFFTLVMTDPD                                              
Sbjct: 61  DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREVISYETPRPNIGIHR 120

[Close]

BLAST of Carg03680 vs. ExPASy TrEMBL
Match: A0A6J1J6E2 (protein SELF-PRUNING-like OS=Cucurbita maxima OX=3661 GN=LOC111481762 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.2e-50
Identity = 116/174 (66.67%), Postives = 119/174 (68.39%), Query Frame = 0


Query: 1   MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGG 60
           MARSVSSEPLVVGRVIGDVLD FTQ+MKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGG
Sbjct: 1   MARSVSSEPLVVGRVIGDVLDSFTQTMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGG 60

Query: 61  DLRSFFTLVMTDPD---------------------------------------------- 120
           DLRSFFTLVMTDPD                                              
Sbjct: 61  DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREVISYETPKPNIGIHR 120

[Close]

BLAST of Carg03680 vs. ExPASy TrEMBL
Match: A0A1S3B659 (protein SELF-PRUNING OS=Cucumis melo OX=3656 GN=LOC103486602 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.9e-42
Identity = 105/170 (61.76%), Postives = 113/170 (66.47%), Query Frame = 0


Query: 1   MARS--VSSEPLVVGRVIGDVLDPFTQSMKMTVSY-NNKQVFNGHEFFPSAVAAKPKAEI 60
           MARS  +SSEPLVVGRVIGDVLD FTQSMKM+V Y NNKQVFNGHEFFPSAVAAKP+AEI
Sbjct: 1   MARSSVMSSEPLVVGRVIGDVLDSFTQSMKMSVFYSNNKQVFNGHEFFPSAVAAKPRAEI 60

Query: 61  LGGDLRSFFTLVMTDPD------------------------------------------- 120
            GGDLRSFFTL+MTDPD                                           
Sbjct: 61  HGGDLRSFFTLIMTDPDVPGPSDPYLREHLHWILNEITGREVVSYETPRPNIGIHRFVFV 120

[Close]

BLAST of Carg03680 vs. ExPASy TrEMBL
Match: B9ZYL2 (TFL1-like protein OS=Cucumis sativus OX=3659 GN=CsTFL1b PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 4.6e-40
Identity = 103/177 (58.19%), Postives = 112/177 (63.28%), Query Frame = 0


Query: 1   MARS--VSSEPLVVGRVIGDVLDPFTQSMKMTVSY-NNKQVFNGHEFFPSAVAAKPKAEI 60
           MARS  +SSEPLVVGRVIGDVLD FTQSMKM+V Y NNKQVFNGHEFFPSAVAAKP+AEI
Sbjct: 1   MARSSAMSSEPLVVGRVIGDVLDSFTQSMKMSVFYSNNKQVFNGHEFFPSAVAAKPRAEI 60

Query: 61  LGGDLRSFFTLVMTDPD------------------------------------------- 120
            GGDLRSFFTL+MTDPD                                           
Sbjct: 61  HGGDLRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREVVSYETPKPNIG 120

[Close]

BLAST of Carg03680 vs. ExPASy TrEMBL
Match: A0A1J7HEW2 (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_19608 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 5.1e-39
Identity = 98/174 (56.32%), Postives = 106/174 (60.92%), Query Frame = 0


Query: 1   MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGG 60
           MAR +S EPL+VGRVIGDVLD FT +MKMTVSYNNKQVFNGHE FPS +  KP+ EI GG
Sbjct: 1   MAR-MSLEPLIVGRVIGDVLDSFTSTMKMTVSYNNKQVFNGHELFPSTITNKPRVEIDGG 60

Query: 61  DLRSFFTLVMTDPD---------------------------------------------- 120
           DLRSFFTLVMTDPD                                              
Sbjct: 61  DLRSFFTLVMTDPDVPGPSDPYLREHLHWMVTDIPGTTDATFGKDLVSYEIPKPNIGIHR 120

[Close]

BLAST of Carg03680 vs. TAIR 10
Match: AT2G27550.1 (centroradialis )

HSP 1 Score: 142.9 bits (359), Expect = 1.7e-34
Identity = 86/176 (48.86%), Postives = 100/176 (56.82%), Query Frame = 0


Query: 1   MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSYN-NKQVFNGHEFFPSAVAAKPKAEILG 60
           MAR +SS+PL+VGRVIGDV+D   Q++KMTV+YN +KQV+NGHE FPS V  KPK E+ G
Sbjct: 1   MAR-ISSDPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHG 60

Query: 61  GDLRSFFTLVMTDPD--------------------------------------------- 120
           GD+RSFFTLVMTDPD                                             
Sbjct: 61  GDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIH 120

[Close]

BLAST of Carg03680 vs. TAIR 10
Match: AT5G03840.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 136.3 bits (342), Expect = 1.6e-32
Identity = 80/168 (47.62%), Postives = 96/168 (57.14%), Query Frame = 0


Query: 8   EPLVVGRVIGDVLDPFTQSMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGGDLRSFFT 67
           EPL++GRV+GDVLD FT + KM VSYN KQV NGHE FPS+V++KP+ EI GGDLRSFFT
Sbjct: 10  EPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLRSFFT 69

Query: 68  LVMTDPD----------------------------------------------------- 121
           LVM DPD                                                     
Sbjct: 70  LVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVLFR 129

[Close]

BLAST of Carg03680 vs. TAIR 10
Match: AT5G62040.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 105.9 bits (263), Expect = 2.3e-23
Identity = 71/176 (40.34%), Postives = 89/176 (50.57%), Query Frame = 0


Query: 1   MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSYN-NKQVFNGHEFFPSAVAAKPKAEILG 60
           M+R +  EPL+VGRVIGDVL+ F  S+ M V++N N  V NGHE  PS + +KP+ EI G
Sbjct: 1   MSREI--EPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGG 60

Query: 61  GDLRSFFTLVMTDPD--------------------------------------------- 120
            DLRSFFTL+M DPD                                             
Sbjct: 61  QDLRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIH 120

[Close]

BLAST of Carg03680 vs. TAIR 10
Match: AT1G65480.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 97.1 bits (240), Expect = 1.1e-20
Identity = 61/167 (36.53%), Postives = 80/167 (47.90%), Query Frame = 0


Query: 8   EPLVVGRVIGDVLDPFTQSMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGGDLRSFFT 67
           +PL+V RV+GDVLDPF +S+ + V+Y  ++V NG +  PS V  KP+ EI G DLR+F+T
Sbjct: 7   DPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFYT 66

Query: 68  LVMTDPD----------------------------------------------------- 121
           LVM DPD                                                     
Sbjct: 67  LVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILFR 126

[Close]

BLAST of Carg03680 vs. TAIR 10
Match: AT4G20370.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 94.4 bits (233), Expect = 6.8e-20
Identity = 62/167 (37.13%), Postives = 76/167 (45.51%), Query Frame = 0


Query: 8   EPLVVGRVIGDVLDPFTQSMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGGDLRSFFT 67
           +PLVVG V+GDVLDPFT+ + + V+Y +++V NG +  PS V  KP  EI G D R+F+T
Sbjct: 7   DPLVVGSVVGDVLDPFTRLVSLKVTYGHREVTNGLDLRPSQVLNKPIVEIGGDDFRNFYT 66

Query: 68  LVMTDPD----------------------------------------------------- 121
           LVM DPD                                                     
Sbjct: 67  LVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRIVLVLFR 126

The following BLAST results are available for this feature:

BLAST of Carg03680 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7017448.1	1.4e-59	100.00	Protein SELF-PRUNING, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6580691.1	4.9e-52	68.97	Protein SELF-PRUNING, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023528346.1	6.4e-52	68.39	protein SELF-PRUNING-like [Cucurbita pepo subsp. pepo]	[more]
XP_022935180.1	3.2e-51	67.82	protein SELF-PRUNING-like [Cucurbita moschata]	[more]
XP_022983119.1	4.6e-50	66.67	protein SELF-PRUNING-like [Cucurbita maxima]	[more]

BLAST of Carg03680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZNV5	2.4e-33	48.86	Protein CENTRORADIALIS-like OS=Arabidopsis thaliana OX=3702 GN=CEN PE=2 SV=1	[more]
Q9XH43	2.0e-32	46.82	CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1	[more]
O82088	2.0e-32	47.93	Protein SELF-PRUNING OS=Solanum lycopersicum OX=4081 GN=SP PE=2 SV=1	[more]
Q9XH42	7.6e-32	46.24	CEN-like protein 4 OS=Nicotiana tabacum OX=4097 GN=CET4 PE=2 SV=1	[more]
P93003	2.2e-31	47.62	Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana OX=3702 GN=TFL1 PE=1 SV=1	[more]

BLAST of Carg03680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F9W4	1.5e-51	67.82	protein SELF-PRUNING-like OS=Cucurbita moschata OX=3662 GN=LOC111442134 PE=3 SV=...	[more]
A0A6J1J6E2	2.2e-50	66.67	protein SELF-PRUNING-like OS=Cucurbita maxima OX=3661 GN=LOC111481762 PE=3 SV=1	[more]
A0A1S3B659	2.9e-42	61.76	protein SELF-PRUNING OS=Cucumis melo OX=3656 GN=LOC103486602 PE=3 SV=1	[more]
B9ZYL2	4.6e-40	58.19	TFL1-like protein OS=Cucumis sativus OX=3659 GN=CsTFL1b PE=2 SV=1	[more]
A0A1J7HEW2	5.1e-39	56.32	Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_19608 PE=3 S...	[more]

BLAST of Carg03680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27550.1	1.7e-34	48.86	centroradialis	[more]
AT5G03840.1	1.6e-32	47.62	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT5G62040.1	2.3e-23	40.34	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT1G65480.1	1.1e-20	36.53	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT4G20370.1	6.8e-20	37.13	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036610	PEBP-like superfamily	GENE3D	3.90.280.10		coord: 80..115 e-value: 9.2E-7 score: 30.6
IPR036610	PEBP-like superfamily	GENE3D	3.90.280.10		coord: 1..79 e-value: 2.1E-16 score: 62.0
IPR036610	PEBP-like superfamily	SUPERFAMILY	49777	PEBP-like	coord: 7..115
IPR031114	TERMINAL FLOWER 1-like	PANTHER	PTHR11362:SF13	PROTEIN TERMINAL FLOWER 1	coord: 5..74 coord: 75..119
IPR035810	Phosphatidylethanolamine-binding protein, eukaryotic	PANTHER	PTHR11362	PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN	coord: 5..74 coord: 75..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03680-RA	Carg03680-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009910	negative regulation of flower development
cellular_component	GO:0005622	intracellular anatomical structure
molecular_function	GO:0003712	transcription coregulator activity