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Carg03672 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCGCTATTTCAATTAAACCGGAGCGGTTCATCCAGATCGTTAAGGGTTATTGCAGCAGAGTCGAGTCGGTTCGAATCGGTTCGAAGCGGTCAAGAGTTGCAACAAATCAAACTACTCCATTCCCGTCTTCTTCTCTCAACCAAAGGCGCGGGAAGTTTCTACTAACCCTAACGCATCGATCAGAAGGCAAAGAACTCGCGAGAACATCGACAATGAACTCAGCAGGTCGAAGAAGCGGAGGAGGCCTTTTCGAAGGTCTGTACAGAGTGATTATGCGCCGTAATTCTGTTTACGTCACCTTCATCATCGCCGGTGCTTTTCTCGGAGAGCGGGTAATGTTGTGGACCTCATTTTTCATACTCATTCATGTCTGTTCCTTTTTTCTCTATATTTTTTTTTGGTGGATTGTGGTTTTGTTAATTTCGTTTTCCGCACTTGATCTGAGGGTCTAGTTTTTGCAAATCACTGGATATTGGTGTTAAACTTCGTGGCTGTGTTATCGCTGATTCATGGAAAAAGTAAAACGAAATAAGTTTATTCGTATCTGCCCGCTCACAAGGTGAAACTGTATTGAAATTTATGGTTTATCTGCTGGAGGAGAAACGATAAAGCGTAGAGGATTCATATATTGGTTTTTTTTTTTTTTTTTTGTTCCAACATCCTCTTTGGATTCATATATTGGTTCTGGCATCAATTAAAAAATTCGCCGAACATGATCGTATTGAATTTCATTGATGATTGTGTGCAGATTCTGAATTATGTAAATACGGAATTTGGGCATTATTTGATCTGTTTATTGTAGTCAGAGGGATTCATTTTTTGCTTTAAATTTTAAACTATCATGATAATGGAAGTGGTAACCAGGAAAAAGGAACGTAAGGATGCTTCTCTGTTTGTTTTATGGACTGTTATGTAATGGGCATTGTGGCAGGGGACTTGTGAGCCGCATGGCATTTGTGTTGTTTCTGTAAGTTTATGGTATCTTTTTCTTACCTTAATGCTAGTATTTCTAATGGCGCAGGCTGTGGATTATGGAGTTCACAAGCTCTGGGAGTACAACAATGTTGGGGTATGGAACTTAACCCCATAAATTGATTTACTTTGTTTTTCTGCGTACACATTTCAAATTTATTGATGGCCTCTTTCTCCACATAGACGATCATTTTGGCTATTCTTGTGTGCTCCATTAATCTAGAATAAATACTTGATGTTTTATTCTGGATCTTTATTTGAAGATCATTTATTGTGTACTTAAGATCAGGAAAGTCTTGATTTCTAGAAAGTTAAGGCTGTATTAGAACTTTCCTGGGATAGTTATAAACTAATTAGTTTGTGTATTAAACCGTGTCACGGTTCAGAAGCAAATTGGTTTTAACTACTCAGACCTATGGTTGTGATGCTCCCTTTTTCTTGTATGTTAAGTGAGCTGTCAATAATTACTAACCACGGGCACCAAAAACATAACTCAACTAATTAAGATATTATATCCTTGATCGAAAGTCAAACTTTTGAAGTTTGAAGACTACCTTAATCTTACATGTTGAACTCTTAAAAGGGCTGTTAGGATTGATACTCAGCACCCACAAAGTAAACAGTATTTATTAGTTCTTTTTTTTTAATTGAAAATGTTCTTCATAACGATGAGTAAAATGGGTCGAAAGAACAAATCAAGGGTGATTTACATGCTAGACAAATTATATGAAGGAAATTTGAAACATTGTTTTTTTTTTTTTTAATTTATTTTCATTTTCCTCCAATTAAATGTCGATCTATATCATTCATCCTTATTCGACTACAATCCTTCTTTAGAGGAGATGCTTACCTGCATAAAAGTGCTACTGAACAACTCTTGTTCCGAATTAGTAGCTTTCTTAACTCATTTTCAACTCTGTTTTGATATATGATGGTCTAATAATTATGCAGAAGCGGTATGAAGACATTTCAGTTTTGGGGCAAAGACCGTCGGAAGAATGAACTTGTCAGCCGCCAATTGAAAGCTTACACAATCATGGACACGAGGTAAAAAGAACTGGTGGCTTAGGATGGTAAATGAGAATGTATTTCCAATGGAAAAAAACGTTCTTTCTTTTCAGTCTGGAAAGTTTGTGTTTCTTCATGAGATTCTAATCATATTTTATTTGATTAAGTTCGGAGTTCCGAGGTTTCGTATATTACCTTTGATTTTGATCATCGAGAATACATGAAAAGCAAATTGTTAAGAGTACTAATTACAAAGTTATTAGGATATGAGCAGTGGCATAATGGTGTTACCCTTAGGTTGTAACTTTTGTACATAGATGGAGTTTAGAGAACTTGAGACAATTTAAAGAAACTTTGCAAATTAGTCAGTCTATAGGGGATTGGGGGAGGAAGATAGCTCTCTCGAAAAGTTATCGTCTTTGTCGTTTCTCTATAGTTTCGGTGCTGAAACCGAAGAGGGAGGCTCTCGGAATTTTGCAAGAGAAGTAGAGGGGTTGTTTTGTTAGAGAGAAGAAA ATGCTCGCTATTTCAATTAAACCGGAGCGGTTCATCCAGATCGTTAAGGGTTATTGCAGCAGAGTCGAGTCGGTTCGAATCGGTTCGAAGCGGTCAAGAGTTGCAACAAATCAAACTACTCCATTCCCGTCTTCTTCTCTCAACCAAAGGCGCGGGAAGTTTCTACTAACCCTAACGCATCGATCAGAAGGCAAAGAACTCGCGAGAACATCGACAATGAACTCAGCAGGTCGAAGAAGCGGAGGAGGCCTTTTCGAAGGTCTGTACAGAGTGATTATGCGCCGTAATTCTGTTTACGTCACCTTCATCATCGCCGGTGCTTTTCTCGGAGAGCGGGCTGTGGATTATGGAGTTCACAAGCTCTGGGAGTACAACAATGTTGGGAAGCGGTATGAAGACATTTCAGTTTTGGGGCAAAGACCGTCGGAAGAATGAACTTGTCAGCCGCCAATTGAAAGCTTACACAATCATGGACACGAGGTAAAAAGAACTGGTGGCTTAGGATGGTAAATGAGAATGTATTTCCAATGGAAAAAAACGTTCTTTCTTTTCAGTCTGGAAAGTTTGTGTTTCTTCATGAGATTCTAATCATATTTTATTTGATTAAGTTCGGAGTTCCGAGGTTTCGTATATTACCTTTGATTTTGATCATCGAGAATACATGAAAAGCAAATTGTTAAGAGTACTAATTACAAAGTTATTAGGATATGAGCAGTGGCATAATGGTGTTACCCTTAGGTTGTAACTTTTGTACATAGATGGAGTTTAGAGAACTTGAGACAATTTAAAGAAACTTTGCAAATTAGTCAGTCTATAGGGGATTGGGGGAGGAAGATAGCTCTCTCGAAAAGTTATCGTCTTTGTCGTTTCTCTATAGTTTCGGTGCTGAAACCGAAGAGGGAGGCTCTCGGAATTTTGCAAGAGAAGTAGAGGGGTTGTTTTGTTAGAGAGAAGAAA ATGCTCGCTATTTCAATTAAACCGGAGCGGTTCATCCAGATCGTTAAGGGTTATTGCAGCAGAGTCGAGTCGGTTCGAATCGGTTCGAAGCGGTCAAGAGTTGCAACAAATCAAACTACTCCATTCCCGTCTTCTTCTCTCAACCAAAGGCGCGGGAAGTTTCTACTAACCCTAACGCATCGATCAGAAGGCAAAGAACTCGCGAGAACATCGACAATGAACTCAGCAGGTCGAAGAAGCGGAGGAGGCCTTTTCGAAGGTCTGTACAGAGTGATTATGCGCCGTAATTCTGTTTACGTCACCTTCATCATCGCCGGTGCTTTTCTCGGAGAGCGGGCTGTGGATTATGGAGTTCACAAGCTCTGGGAGTACAACAATGTTGGGAAGCGGTATGAAGACATTTCAGTTTTGGGGCAAAGACCGTCGGAAGAATGA MLAISIKPERFIQIVKGYCSRVESVRIGSKRSRVATNQTTPFPSSSLNQRRGKFLLTLTHRSEGKELARTSTMNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE Homology
BLAST of Carg03672 vs. NCBI nr
Match: KAG7017456.1 (hypothetical protein SDJN02_19321, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 283.5 bits (724), Expect = 1.0e-72 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of Carg03672 vs. NCBI nr
Match: KAG6580699.1 (Glucosamine 6-phosphate N-acetyltransferase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 255.8 bits (652), Expect = 2.3e-64 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of Carg03672 vs. NCBI nr
Match: KAG6596568.1 (Cytochrome b-c1 complex subunit 9, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 159.5 bits (402), Expect = 2.2e-35 Identity = 96/141 (68.09%), Postives = 103/141 (73.05%), Query Frame = 0
BLAST of Carg03672 vs. NCBI nr
Match: XP_022934205.1 (cytochrome b-c1 complex subunit 9-like [Cucurbita moschata] >XP_022983168.1 cytochrome b-c1 complex subunit 9-like [Cucurbita maxima] >XP_023526376.1 cytochrome b-c1 complex subunit 9-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 149.1 bits (375), Expect = 3.0e-32 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Carg03672 vs. NCBI nr
Match: PQQ06111.1 (cytochrome b-c1 complex subunit 9 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 146.4 bits (368), Expect = 2.0e-31 Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of Carg03672 vs. ExPASy Swiss-Prot
Match: Q9LXJ2 (Cytochrome b-c1 complex subunit 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=QCR9 PE=1 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 6.8e-27 Identity = 59/72 (81.94%), Postives = 62/72 (86.11%), Query Frame = 0
BLAST of Carg03672 vs. ExPASy Swiss-Prot
Match: P46270 (Cytochrome b-c1 complex subunit 9 OS=Solanum tuberosum OX=4113 PE=1 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 7.5e-26 Identity = 56/72 (77.78%), Postives = 61/72 (84.72%), Query Frame = 0
BLAST of Carg03672 vs. ExPASy Swiss-Prot
Match: Q7SGT7 (Cytochrome b-c1 complex subunit 9, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=qcr9 PE=1 SV=2) HSP 1 Score: 45.8 bits (107), Expect = 4.7e-04 Identity = 20/47 (42.55%), Postives = 31/47 (65.96%), Query Frame = 0
BLAST of Carg03672 vs. ExPASy TrEMBL
Match: A0A6J1J703 (cytochrome b-c1 complex subunit 9-like OS=Cucurbita maxima OX=3661 GN=LOC111481802 PE=3 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.5e-32 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Carg03672 vs. ExPASy TrEMBL
Match: A0A6J1F714 (cytochrome b-c1 complex subunit 9-like OS=Cucurbita moschata OX=3662 GN=LOC111441446 PE=3 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.5e-32 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Carg03672 vs. ExPASy TrEMBL
Match: A0A314YLX6 (Cytochrome b-c1 complex subunit 9 OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_40588 PE=3 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 9.5e-32 Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of Carg03672 vs. ExPASy TrEMBL
Match: M5WB59 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G110400 PE=3 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 1.6e-31 Identity = 69/72 (95.83%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of Carg03672 vs. ExPASy TrEMBL
Match: A0A5E4F1C6 (PREDICTED: cytochrome b-c1 complex subunit 9 OS=Prunus dulcis OX=3755 GN=ALMOND_2B027630 PE=3 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 1.6e-31 Identity = 69/72 (95.83%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of Carg03672 vs. TAIR 10
Match: AT3G52730.1 (ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein ) HSP 1 Score: 121.7 bits (304), Expect = 4.8e-28 Identity = 59/72 (81.94%), Postives = 62/72 (86.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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