Carg03640 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGGACACAGTCGAGATTCAAGAGGATTTGTGTGTTTTGTGGAAGCAGTTCTGGGAAGAAGCCTACCTACCAATCTGCTGCTGTGGAGCTTGGCCAAGAACTGGTATTTTTCTCACAATCCATGATCTGGGTTTTCATTTTCATGCATTTTAATCATTCATTGTTGCATTTTTTTCAAAACCCATTTCGAAAAATTCCATCTTTTTTGTTTCCCAAGTATTGTATTTTGACTTTGGGAACCAAATCAACCTTAATTTGACATAAAGTCATTCTCTCAATATTCCTATTTGTTATGACAAATGAAGCTTTTTCTTTTATCTCTTTACCTTTTCAAAAAGTCCTCTCTTTCCATTTTCATATCACAACTCATCAGCTTAAGGTTTTTGAAGTTTGAATTTGAACTCATCATCTTCAACCTCGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGAAAGAGAAAGACAGTGAGATTTGAGCTGTAACCTGCCTGTCAGTTGAGCAGCCTTCTTGCATGATCTCAACATGTTTTAATTATCAAATTCATATAATTTAAGGGTTTGTATAAATATTATCAACTGGGAAACCAAACGTGCTTGCTTGACATGATGAGAGCTTGTATGAGCGTTCTTCACATCACACACCCTTCTATGCCCCCATTTTCCCCATTATTATTCAAATTAATGGTTCATTTCATTTCCCAATTCCCCATTTCTTGGTTAAAAAATTCAAAATTTCCCTTTTTTTTTTTTTTTTTTTTTTTGTTGTTATTGTTGTTGTTTAATGATGATTCAACTGCAACGCGTGTTGATTGATGTGTTTTGAATTTTTAATGTTTGAAGGTGGAGAGAAGCATTGATCTTGTTTATGGAGGTGGGAGCGTGGGATTGATGGGTCTTGTTTCTCAGGCTGTTCATGATGGCGGGCGCCATGTTCTAGGGTTTCTTTCTCTTTCCCTCTTTTATAAATAAATTTCTTTATAATTTCCCCCTCTTCTTCTTCAATTTAAGATGATTACATTATGACCTTTACTTTGCTTCTCAAACCAACTTAACTTAATTAGCTTTGGTGTACTTTTTCAAAAACCTTTTCTTTTTTTACCTTTTCCATTCTATTTTGTAATAAAGAACGGGTAAAACAAGGCAGCAGTCAAAAAGTAGTTCCTCTTTCAGACCAATTAATTTAGAGTCAAATTCTTGTCTGTAAAAAGATGGGGATTTGTCAACAATCCCACTCCAAAGCCAAACATTTGGGGTTCGAATGTCTATTGGATTTATGTTGTCCCCTCATGTTCTTGCTCTACAATATGAAAAGCCGACAGTTTTATTTCATTATTATTTGTAGACCACCGAGGAATTTATGGCTTTTGAATTCCAACACTACTTTCAATGTCAAATGATTGTCAGTAACCTCGGTGTTTTTTTTTTTTTTTTTTTTTTTTTGACTGTTTTGCAGAGTAATTCCAAGGACCCTAATGACTGTAGAGGTACATAAACAAGGAAGTTTGCATTTGAAGCATATTCCCTTTGCTATGGATGAATGTTTACTGAATTTATAAATCTTTATATGTTTAGATAACTGGTGAGAGTGTTGGAGAAGTTAAACCGGTGTCGGATATGCACCAACGAAAGGCCGAGATGGCTCGACAAGCCGATGCTTTCATTGCTTTACCTGGTACTACTCATTCTTTGATCGTTCCATATGAATAGCACAAAGATTTTGGGCATACAAATAGTGTTAATAGCTTATTTTGTGCATAAAAATTGAAACTTGCAGGAGGATATGGGACGCTTGAAGAGCTTCTTGAAGTTATTACATGGGCACAACTTGGAATCCATCGCAAGCCTGTGAGTACTAAAACAATCTTCACTTTTTTTGTATCCATTTTTATCCGTTTAGGCTACAATGGCAGACAAGTCAAACATTTGGTCTCATTTCGAGATGACATTTCGTGTTCAAGCCATAATGATACATATATTAAAAAAAAAAAGTTGCATTGTCTTTGTTTGAAAATGTTGAAATCATAATGATGGCCCTTTCACATGATATCCATGTGTTCTGGTTTGGCCTTCCATTTTATAATTCCATGATTACTAACCATATGGTTTCCCATGTCTGTTGGAAAGAACCCACCAAAAAAGATCCCATTTTTCAACACCCTTTTGCTTGACAAACAAGTAAAGAATCCCTTTTATCCAAACCAAAATTTAGTTAGTCGTCGGTCGGGTACTTGGGATGAGTCAATATGAGTTCGTTCGAGTCAACTCAACCCTTAAACCGAATTCGTAGGACAATGACTGACAAACCCTTGGAATAGAGAATCAAAACATGTGAGTGTTACTCCAAACTCACATGGGAAAGATTTGGAGCTTAAAAGATTTCCCTTCAAAATTCCCTAATTATAACACAATAATGATATTGGTGGTCAAACAAATCTCTTTGATTTTTTAAGAACACAATTGTGAATAAAATTTGCAGGTGGGACTGTTGAATGTGGATGGATATTACAATTCGTTGCTGAGTTTCATTGATAAGGCAGTTGATGAAGGCTTTGTGTCCCCAACCGCACGTCGTATTATTGTGTCTGCCCCAACTGCCAAGGCCTTAGTCAGACAACTTGAGGTACTTTTATTTATTTATATTTTATTATTATTATTATTATTATTTTAATTACTTTTTAAGGGCAGTGTGTCTCTGATTCAAAGGCTAACTTCACAGTTAAGGGCAGTCCCTACACTTTCCCATTCCTACGGAAATGGGCAGTGTCCCACTTGACTTGTTTAATTAAATTAAATATAATAATCTCTGAGTCTTAATTGCGTTTCGAGGCTTTAATTATTCTCTAATTACCTCAACTGGTACACGATAATTTAACTAATTACAAACCGGCCCCTGGAGAATGGGGAATTTTTGGCCTTTTTTTTTTCTCTCTTTTTTAATTAATTAATTACGGCAGGAATACGTACCGGAGTACGACGAGATAACGTCACAGTTGGTGTGGGAAGATGTTGACAGGAGAAGTTACGTGACCGAATCAGAGATCGCCACG ATGGAAGGGACACAGTCGAGATTCAAGAGGATTTGTGTGTTTTGTGGAAGCAGTTCTGGGAAGAAGCCTACCTACCAATCTGCTGCTGTGGAGCTTGGCCAAGAACTGGTGGAGAGAAGCATTGATCTTGTTTATGGAGGTGGGAGCGTGGGATTGATGGGTCTTGTTTCTCAGGCTGTTCATGATGGCGGGCGCCATGTTCTAGGAGTAATTCCAAGGACCCTAATGACTGTAGAGATAACTGGTGAGAGTGTTGGAGAAGTTAAACCGGTGTCGGATATGCACCAACGAAAGGCCGAGATGGCTCGACAAGCCGATGCTTTCATTGCTTTACCTGGAGGATATGGGACGCTTGAAGAGCTTCTTGAAGTTATTACATGGGCACAACTTGGAATCCATCGCAAGCCTGTGGGACTGTTGAATGTGGATGGATATTACAATTCGTTGCTGAGTTTCATTGATAAGGCAGTTGATGAAGGCTTTGTGTCCCCAACCGCACGTCGTATTATTGTGTCTGCCCCAACTGCCAAGGCCTTAGTCAGACAACTTGAGGAATACGTACCGGAGTACGACGAGATAACGTCACAGTTGGTGTGGGAAGATGTTGACAGGAGAAGTTACGTGACCGAATCAGAGATCGCCACG ATGGAAGGGACACAGTCGAGATTCAAGAGGATTTGTGTGTTTTGTGGAAGCAGTTCTGGGAAGAAGCCTACCTACCAATCTGCTGCTGTGGAGCTTGGCCAAGAACTGGTGGAGAGAAGCATTGATCTTGTTTATGGAGGTGGGAGCGTGGGATTGATGGGTCTTGTTTCTCAGGCTGTTCATGATGGCGGGCGCCATGTTCTAGGAGTAATTCCAAGGACCCTAATGACTGTAGAGATAACTGGTGAGAGTGTTGGAGAAGTTAAACCGGTGTCGGATATGCACCAACGAAAGGCCGAGATGGCTCGACAAGCCGATGCTTTCATTGCTTTACCTGGAGGATATGGGACGCTTGAAGAGCTTCTTGAAGTTATTACATGGGCACAACTTGGAATCCATCGCAAGCCTGTGGGACTGTTGAATGTGGATGGATATTACAATTCGTTGCTGAGTTTCATTGATAAGGCAGTTGATGAAGGCTTTGTGTCCCCAACCGCACGTCGTATTATTGTGTCTGCCCCAACTGCCAAGGCCTTAGTCAGACAACTTGAGGAATACGTACCGGAGTACGACGAGATAACGTCACAGTTGGTGTGGGAAGATGTTGACAGGAGAAGTTACGTGACCGAATCAGAGATCGCCACG MEGTQSRFKRICVFCGSSSGKKPTYQSAAVELGQELVERSIDLVYGGGSVGLMGLVSQAVHDGGRHVLGVIPRTLMTVEITGESVGEVKPVSDMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALVRQLEEYVPEYDEITSQLVWEDVDRRSYVTESEIAT Homology
BLAST of Carg03640 vs. NCBI nr
Match: KAG6580735.1 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017488.1 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 424.9 bits (1091), Expect = 4.2e-115 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
BLAST of Carg03640 vs. NCBI nr
Match: XP_022983101.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 isoform X1 [Cucurbita maxima] >XP_023528160.1 cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 422.9 bits (1086), Expect = 1.6e-114 Identity = 214/215 (99.53%), Postives = 214/215 (99.53%), Query Frame = 0
BLAST of Carg03640 vs. NCBI nr
Match: XP_022934751.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Cucurbita moschata]) HSP 1 Score: 421.8 bits (1083), Expect = 3.6e-114 Identity = 213/215 (99.07%), Postives = 214/215 (99.53%), Query Frame = 0
BLAST of Carg03640 vs. NCBI nr
Match: XP_038903675.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 isoform X1 [Benincasa hispida]) HSP 1 Score: 410.6 bits (1054), Expect = 8.3e-111 Identity = 205/215 (95.35%), Postives = 211/215 (98.14%), Query Frame = 0
BLAST of Carg03640 vs. NCBI nr
Match: XP_004136507.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Cucumis sativus]) HSP 1 Score: 405.6 bits (1041), Expect = 2.7e-109 Identity = 203/215 (94.42%), Postives = 209/215 (97.21%), Query Frame = 0
BLAST of Carg03640 vs. ExPASy Swiss-Prot
Match: Q8GW29 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 OS=Arabidopsis thaliana OX=3702 GN=LOG7 PE=1 SV=2) HSP 1 Score: 372.9 bits (956), Expect = 2.5e-102 Identity = 185/215 (86.05%), Postives = 200/215 (93.02%), Query Frame = 0
BLAST of Carg03640 vs. ExPASy Swiss-Prot
Match: Q7XDB8 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL10 PE=2 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 4.6e-88 Identity = 158/196 (80.61%), Postives = 179/196 (91.33%), Query Frame = 0
BLAST of Carg03640 vs. ExPASy Swiss-Prot
Match: Q8L8B8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana OX=3702 GN=LOG3 PE=1 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 7.8e-88 Identity = 157/206 (76.21%), Postives = 185/206 (89.81%), Query Frame = 0
BLAST of Carg03640 vs. ExPASy Swiss-Prot
Match: Q8H7U8 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL3 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL3 PE=2 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 1.7e-87 Identity = 157/196 (80.10%), Postives = 178/196 (90.82%), Query Frame = 0
BLAST of Carg03640 vs. ExPASy Swiss-Prot
Match: B9F166 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL2 PE=3 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 4.3e-86 Identity = 156/209 (74.64%), Postives = 183/209 (87.56%), Query Frame = 0
BLAST of Carg03640 vs. ExPASy TrEMBL
Match: A0A6J1J161 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111481749 PE=3 SV=1) HSP 1 Score: 422.9 bits (1086), Expect = 7.8e-115 Identity = 214/215 (99.53%), Postives = 214/215 (99.53%), Query Frame = 0
BLAST of Carg03640 vs. ExPASy TrEMBL
Match: A0A6J1F2P8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111441836 PE=3 SV=1) HSP 1 Score: 421.8 bits (1083), Expect = 1.7e-114 Identity = 213/215 (99.07%), Postives = 214/215 (99.53%), Query Frame = 0
BLAST of Carg03640 vs. ExPASy TrEMBL
Match: A0A0A0LEQ3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3659 GN=Csa_3G778430 PE=3 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 1.3e-109 Identity = 203/215 (94.42%), Postives = 209/215 (97.21%), Query Frame = 0
BLAST of Carg03640 vs. ExPASy TrEMBL
Match: A0A6J1CSQ5 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Momordica charantia OX=3673 GN=LOC111014230 PE=3 SV=1) HSP 1 Score: 404.4 bits (1038), Expect = 2.9e-109 Identity = 205/215 (95.35%), Postives = 208/215 (96.74%), Query Frame = 0
BLAST of Carg03640 vs. ExPASy TrEMBL
Match: A0A6J1FQZ0 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111446119 PE=3 SV=1) HSP 1 Score: 390.2 bits (1001), Expect = 5.6e-105 Identity = 196/215 (91.16%), Postives = 204/215 (94.88%), Query Frame = 0
BLAST of Carg03640 vs. TAIR 10
Match: AT5G06300.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 372.9 bits (956), Expect = 1.8e-103 Identity = 185/215 (86.05%), Postives = 200/215 (93.02%), Query Frame = 0
BLAST of Carg03640 vs. TAIR 10
Match: AT2G37210.1 (lysine decarboxylase family protein ) HSP 1 Score: 324.7 bits (831), Expect = 5.6e-89 Identity = 157/206 (76.21%), Postives = 185/206 (89.81%), Query Frame = 0
BLAST of Carg03640 vs. TAIR 10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 318.5 bits (815), Expect = 4.0e-87 Identity = 156/206 (75.73%), Postives = 183/206 (88.83%), Query Frame = 0
BLAST of Carg03640 vs. TAIR 10
Match: AT2G35990.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 317.0 bits (811), Expect = 1.2e-86 Identity = 154/201 (76.62%), Postives = 178/201 (88.56%), Query Frame = 0
BLAST of Carg03640 vs. TAIR 10
Match: AT2G28305.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 316.2 bits (809), Expect = 2.0e-86 Identity = 151/196 (77.04%), Postives = 179/196 (91.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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