Carg03582 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03582
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Calcium load-activated calcium channel
Location	Carg_Chr14: 1860190 .. 1860771 (-)
RNA-Seq Expression	Carg03582
Synteny	Carg03582

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACAATCCCCCTCTTTTCCTCCTTCCGATATTCCGACAGCCTCACGGTGGTCGGAATCTCTGTCTGCACTGCCGTCATCTGCGAGGCCATCTCATGGATTCTCATCTACCGCACCAACTCCTACAAAACCCTTCGATCCTCCATCGACAAGGCCGCCAAAAAGCTCGAGACCATGAAGACCGACACCTCCAAAATCAACGTCAAGAAATCGAAGACCAAGAAGATCGATCGCGTCGAGACCAGTCTTAAGGAATCGAGCCGCGACCTCTCGCTTTTCAAGTTTAAATCCGGCGCCGTTGTTGCTCTTGTTCTGTTCGTCGTATTTGGATTGCTCAATTCGCTCTTCGAGGGCAAGGTTGTTGCCAAATTGCCGTTTAAGCCTTTTGGTCTTGTGATGAAGATGAGTCACCGAGGGTTACTCGGTGACGATCCTACCGATTGTGCAATGGCGTTCTTGTACTTCCTCTGTTCGATTAGCATTCGGACCAATCTCCAGAAGTTCTTGGGATTCTCGCCACCGAGAGGCGCCGGTGCTGCCGCCGGCTTGTTCCCGATGCCAGATCCTAAGACGAACTGA

mRNA sequence

ATGGCCACAATCCCCCTCTTTTCCTCCTTCCGATATTCCGACAGCCTCACGGTGGTCGGAATCTCTGTCTGCACTGCCGTCATCTGCGAGGCCATCTCATGGATTCTCATCTACCGCACCAACTCCTACAAAACCCTTCGATCCTCCATCGACAAGGCCGCCAAAAAGCTCGAGACCATGAAGACCGACACCTCCAAAATCAACGTCAAGAAATCGAAGACCAAGAAGATCGATCGCGTCGAGACCAGTCTTAAGGAATCGAGCCGCGACCTCTCGCTTTTCAAGTTTAAATCCGGCGCCGTTGTTGCTCTTGTTCTGTTCGTCGTATTTGGATTGCTCAATTCGCTCTTCGAGGGCAAGGTTGTTGCCAAATTGCCGTTTAAGCCTTTTGGTCTTGTGATGAAGATGAGTCACCGAGGGTTACTCGGTGACGATCCTACCGATTGTGCAATGGCGTTCTTGTACTTCCTCTGTTCGATTAGCATTCGGACCAATCTCCAGAAGTTCTTGGGATTCTCGCCACCGAGAGGCGCCGGTGCTGCCGCCGGCTTGTTCCCGATGCCAGATCCTAAGACGAACTGA

Coding sequence (CDS)

ATGGCCACAATCCCCCTCTTTTCCTCCTTCCGATATTCCGACAGCCTCACGGTGGTCGGAATCTCTGTCTGCACTGCCGTCATCTGCGAGGCCATCTCATGGATTCTCATCTACCGCACCAACTCCTACAAAACCCTTCGATCCTCCATCGACAAGGCCGCCAAAAAGCTCGAGACCATGAAGACCGACACCTCCAAAATCAACGTCAAGAAATCGAAGACCAAGAAGATCGATCGCGTCGAGACCAGTCTTAAGGAATCGAGCCGCGACCTCTCGCTTTTCAAGTTTAAATCCGGCGCCGTTGTTGCTCTTGTTCTGTTCGTCGTATTTGGATTGCTCAATTCGCTCTTCGAGGGCAAGGTTGTTGCCAAATTGCCGTTTAAGCCTTTTGGTCTTGTGATGAAGATGAGTCACCGAGGGTTACTCGGTGACGATCCTACCGATTGTGCAATGGCGTTCTTGTACTTCCTCTGTTCGATTAGCATTCGGACCAATCTCCAGAAGTTCTTGGGATTCTCGCCACCGAGAGGCGCCGGTGCTGCCGCCGGCTTGTTCCCGATGCCAGATCCTAAGACGAACTGA

Protein sequence

MATIPLFSSFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLETMKTDTSKINVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAAAGLFPMPDPKTN

Homology

[Close]

BLAST of Carg03582 vs. NCBI nr
Match: XP_022934300.1 (calcium load-activated calcium channel [Cucurbita moschata] >XP_022983111.1 calcium load-activated calcium channel [Cucurbita maxima] >XP_023527728.1 calcium load-activated calcium channel [Cucurbita pepo subsp. pepo] >KAG6580794.1 Calcium load-activated calcium channel, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017545.1 Calcium load-activated calcium channel, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 369.0 bits (946), Expect = 2.5e-98
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MATIPLFSSFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDTSKINVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTDTSKINVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDTSKINVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180

Query: 181 AAGLFPMPDPKTN 194
           AAGLFPMPDPKTN
Sbjct: 181 AAGLFPMPDPKTN 193

[Close]

BLAST of Carg03582 vs. NCBI nr
Match: KAG6596248.1 (Calcium load-activated calcium channel, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027791.1 Calcium load-activated calcium channel, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 353.2 bits (905), Expect = 1.4e-93
Identity = 185/193 (95.85%), Postives = 189/193 (97.93%), Query Frame = 0


Query: 1   MATIPLFSSFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSLTVVGISVCTA++CEAISW+LIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLTVVGISVCTAIVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDTSKINVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTD+SKI VKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGL GDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAG 
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAG- 180

Query: 181 AAGLFPMPDPKTN 194
            AGLFPMPDPKTN
Sbjct: 181 -AGLFPMPDPKTN 191

[Close]

BLAST of Carg03582 vs. NCBI nr
Match: XP_022151350.1 (calcium load-activated calcium channel-like [Momordica charantia])

HSP 1 Score: 352.8 bits (904), Expect = 1.8e-93
Identity = 185/193 (95.85%), Postives = 190/193 (98.45%), Query Frame = 0


Query: 1   MATIPLFSSFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSLTVVGISVCTAV+CEAISW+LIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDTSKINVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTD+SKI+VKKSKTKKIDRVETSLKES+RDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSSKISVKKSKTKKIDRVETSLKESNRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGL GDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAG 
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAG- 180

Query: 181 AAGLFPMPDPKTN 194
            AGLFPMPDPKTN
Sbjct: 181 -AGLFPMPDPKTN 191

[Close]

BLAST of Carg03582 vs. NCBI nr
Match: XP_038903426.1 (calcium load-activated calcium channel-like [Benincasa hispida])

HSP 1 Score: 352.4 bits (903), Expect = 2.4e-93
Identity = 185/193 (95.85%), Postives = 188/193 (97.41%), Query Frame = 0


Query: 1   MATIPLFSSFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIP FSSFRYSDSLTVVGISVCTAV+CEAISW+LIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPFFSSFRYSDSLTVVGISVCTAVVCEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDTSKINVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTD+SKI VKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGL GDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAG 
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAG- 180

Query: 181 AAGLFPMPDPKTN 194
            AGLFPMPDPKTN
Sbjct: 181 -AGLFPMPDPKTN 191

[Close]

BLAST of Carg03582 vs. NCBI nr
Match: XP_004136557.1 (calcium load-activated calcium channel [Cucumis sativus])

HSP 1 Score: 352.4 bits (903), Expect = 2.4e-93
Identity = 185/193 (95.85%), Postives = 189/193 (97.93%), Query Frame = 0


Query: 1   MATIPLFSSFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSL+VVGISVCTAVICEAISW+LIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDTSKINVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTD+SKI VKKSKTKKIDR+ETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGL GDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAG 
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAG- 180

Query: 181 AAGLFPMPDPKTN 194
            AGLFPMPDPKTN
Sbjct: 181 -AGLFPMPDPKTN 191

[Close]

BLAST of Carg03582 vs. ExPASy Swiss-Prot
Match: Q3T0N3 (Calcium load-activated calcium channel OS=Bos taurus OX=9913 GN=TMCO1 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 5.5e-40
Identity = 85/182 (46.70%), Postives = 122/182 (67.03%), Query Frame = 0


Query: 9   SFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLETMKTDTSKIN 68
           S  ++D+L +V ISVCTA++ E I+W+L+YRT+ YK L++ ++K +KKLE  K +T   +
Sbjct: 2   STMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLE-KKKETITES 61

Query: 69  VKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFK 128
             + + KKI+R E  LK ++RDLS+ + KS   +      + G+ NS+F+G+VVAKLPF 
Sbjct: 62  AGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT 121

Query: 129 PFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAAAGLFPMP 188
           P   +  +SHR LLGDD TDC+  FLY LC++SIR N+QK LG +P R A   AG F  P
Sbjct: 122 PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGP 181

Query: 189 DP 191
            P
Sbjct: 182 PP 182

[Close]

BLAST of Carg03582 vs. ExPASy Swiss-Prot
Match: Q9UM00 (Calcium load-activated calcium channel OS=Homo sapiens OX=9606 GN=TMCO1 PE=1 SV=2)

HSP 1 Score: 165.6 bits (418), Expect = 5.5e-40
Identity = 85/182 (46.70%), Postives = 122/182 (67.03%), Query Frame = 0


Query: 9   SFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLETMKTDTSKIN 68
           S  ++D+L +V ISVCTA++ E I+W+L+YRT+ YK L++ ++K +KKLE  K +T   +
Sbjct: 53  STMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLE-KKKETITES 112

Query: 69  VKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFK 128
             + + KKI+R E  LK ++RDLS+ + KS   +      + G+ NS+F+G+VVAKLPF 
Sbjct: 113 AGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT 172

Query: 129 PFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAAAGLFPMP 188
           P   +  +SHR LLGDD TDC+  FLY LC++SIR N+QK LG +P R A   AG F  P
Sbjct: 173 PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGP 232

Query: 189 DP 191
            P
Sbjct: 233 PP 233

[Close]

BLAST of Carg03582 vs. ExPASy Swiss-Prot
Match: Q921L3 (Calcium load-activated calcium channel OS=Mus musculus OX=10090 GN=Tmco1 PE=1 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 5.5e-40
Identity = 85/182 (46.70%), Postives = 122/182 (67.03%), Query Frame = 0


Query: 9   SFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLETMKTDTSKIN 68
           S  ++D+L +V ISVCTA++ E I+W+L+YRT+ YK L++ ++K +KKLE  K +T   +
Sbjct: 2   STMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLE-KKKETITES 61

Query: 69  VKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFK 128
             + + KKI+R E  LK ++RDLS+ + KS   +      + G+ NS+F+G+VVAKLPF 
Sbjct: 62  AGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT 121

Query: 129 PFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAAAGLFPMP 188
           P   +  +SHR LLGDD TDC+  FLY LC++SIR N+QK LG +P R A   AG F  P
Sbjct: 122 PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGP 181

Query: 189 DP 191
            P
Sbjct: 182 PP 182

[Close]

BLAST of Carg03582 vs. ExPASy Swiss-Prot
Match: C5HGF3 (Calcium load-activated calcium channel OS=Sus scrofa OX=9823 GN=TMCO1 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 5.5e-40
Identity = 85/182 (46.70%), Postives = 122/182 (67.03%), Query Frame = 0


Query: 9   SFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLETMKTDTSKIN 68
           S  ++D+L +V ISVCTA++ E I+W+L+YRT+ YK L++ ++K +KKLE  K +T   +
Sbjct: 2   STMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLE-KKKETITES 61

Query: 69  VKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFK 128
             + + KKI+R E  LK ++RDLS+ + KS   +      + G+ NS+F+G+VVAKLPF 
Sbjct: 62  AGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT 121

Query: 129 PFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAAAGLFPMP 188
           P   +  +SHR LLGDD TDC+  FLY LC++SIR N+QK LG +P R A   AG F  P
Sbjct: 122 PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGP 181

Query: 189 DP 191
            P
Sbjct: 182 PP 182

[Close]

BLAST of Carg03582 vs. ExPASy Swiss-Prot
Match: Q5R9B0 (Calcium load-activated calcium channel OS=Pongo abelii OX=9601 GN=TMCO1 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 5.5e-40
Identity = 85/182 (46.70%), Postives = 122/182 (67.03%), Query Frame = 0


Query: 9   SFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLETMKTDTSKIN 68
           S  ++D+L +V ISVCTA++ E I+W+L+YRT+ YK L++ ++K +KKLE  K +T   +
Sbjct: 2   STMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLE-KKKETITES 61

Query: 69  VKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFK 128
             + + KKI+R E  LK ++RDLS+ + KS   +      + G+ NS+F+G+VVAKLPF 
Sbjct: 62  AGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT 121

Query: 129 PFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAAAGLFPMP 188
           P   +  +SHR LLGDD TDC+  FLY LC++SIR N+QK LG +P R A   AG F  P
Sbjct: 122 PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGP 181

Query: 189 DP 191
            P
Sbjct: 182 PP 182

[Close]

BLAST of Carg03582 vs. ExPASy TrEMBL
Match: A0A6J1J172 (Calcium load-activated calcium channel OS=Cucurbita maxima OX=3661 GN=LOC111481756 PE=3 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.2e-98
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MATIPLFSSFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDTSKINVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTDTSKINVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDTSKINVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180

Query: 181 AAGLFPMPDPKTN 194
           AAGLFPMPDPKTN
Sbjct: 181 AAGLFPMPDPKTN 193

[Close]

BLAST of Carg03582 vs. ExPASy TrEMBL
Match: A0A6J1F7A5 (Calcium load-activated calcium channel OS=Cucurbita moschata OX=3662 GN=LOC111441504 PE=3 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.2e-98
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MATIPLFSSFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDTSKINVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTDTSKINVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDTSKINVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180

Query: 181 AAGLFPMPDPKTN 194
           AAGLFPMPDPKTN
Sbjct: 181 AAGLFPMPDPKTN 193

[Close]

BLAST of Carg03582 vs. ExPASy TrEMBL
Match: A0A6J1DAX6 (Calcium load-activated calcium channel OS=Momordica charantia OX=3673 GN=LOC111019313 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 8.9e-94
Identity = 185/193 (95.85%), Postives = 190/193 (98.45%), Query Frame = 0


Query: 1   MATIPLFSSFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSLTVVGISVCTAV+CEAISW+LIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDTSKINVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTD+SKI+VKKSKTKKIDRVETSLKES+RDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSSKISVKKSKTKKIDRVETSLKESNRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGL GDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAG 
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAG- 180

Query: 181 AAGLFPMPDPKTN 194
            AGLFPMPDPKTN
Sbjct: 181 -AGLFPMPDPKTN 191

[Close]

BLAST of Carg03582 vs. ExPASy TrEMBL
Match: A0A0A0LGX0 (Calcium load-activated calcium channel OS=Cucumis sativus OX=3659 GN=Csa_3G799650 PE=3 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.2e-93
Identity = 185/193 (95.85%), Postives = 189/193 (97.93%), Query Frame = 0


Query: 1   MATIPLFSSFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSL+VVGISVCTAVICEAISW+LIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDTSKINVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTD+SKI VKKSKTKKIDR+ETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGL GDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAG 
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAG- 180

Query: 181 AAGLFPMPDPKTN 194
            AGLFPMPDPKTN
Sbjct: 181 -AGLFPMPDPKTN 191

[Close]

BLAST of Carg03582 vs. ExPASy TrEMBL
Match: A0A5A7TQC2 (Calcium load-activated calcium channel OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005230 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.6e-93
Identity = 184/193 (95.34%), Postives = 189/193 (97.93%), Query Frame = 0


Query: 1   MATIPLFSSFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSLTV+GISVCTAVICEAISW+LIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDTSKINVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTD+SKI VKKSKTKKIDR+ETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGL G+DPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAG 
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAG- 180

Query: 181 AAGLFPMPDPKTN 194
            AGLFPMPDPKTN
Sbjct: 181 -AGLFPMPDPKTN 191

[Close]

BLAST of Carg03582 vs. TAIR 10
Match: AT3G12030.1 (Protein of unknown function DUF106, transmembrane )

HSP 1 Score: 317.0 bits (811), Expect = 1.0e-86
Identity = 164/193 (84.97%), Postives = 179/193 (92.75%), Query Frame = 0


Query: 3   TIPLFSSFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLETMKT 62
           TIPLF+SF+Y+DSLTVVGIS CTA++CEAISWILIYRT+SYK+L+ SIDKA KKLETMKT
Sbjct: 4   TIPLFASFKYADSLTVVGISFCTALVCEAISWILIYRTSSYKSLKYSIDKATKKLETMKT 63

Query: 63  D--TSKINVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 122
           +  +SK+++KKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 64  ENPSSKLSIKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 123

Query: 123 VVAKLPFKPFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 182
           VVAKLPF P  +V KMSHRGL GDDPTDC+MAFLY LCSISIRTNLQKFLGFSPPRGA  
Sbjct: 124 VVAKLPFHPITIVKKMSHRGLKGDDPTDCSMAFLYLLCSISIRTNLQKFLGFSPPRGAAG 183

Query: 183 AAGLFPMPDPKTN 194
           A GLFPMPDPKTN
Sbjct: 184 AGGLFPMPDPKTN 196

[Close]

BLAST of Carg03582 vs. TAIR 10
Match: AT5G06660.1 (Protein of unknown function DUF106, transmembrane )

HSP 1 Score: 312.8 bits (800), Expect = 2.0e-85
Identity = 166/196 (84.69%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 1   MAT-IPLFSSFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLET 60
           MAT IPLF+SF+Y+DSLTVVGIS CTA++CEAISWILIYRT+SYK+L+SSIDKA+KKLET
Sbjct: 1   MATAIPLFASFKYADSLTVVGISFCTALVCEAISWILIYRTSSYKSLKSSIDKASKKLET 60

Query: 61  MKTD--TSKINVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLF 120
           MKTD  +SK+  KKSKTKKIDRVE+SLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLF
Sbjct: 61  MKTDNPSSKLTNKKSKTKKIDRVESSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLF 120

Query: 121 EGKVVAKLPFKPFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRG 180
           EGKVVAKLPF P  +V KMSHRGL GDD TDC+MAFLY LCSISIRTNLQKFLGFSPPRG
Sbjct: 121 EGKVVAKLPFHPITIVRKMSHRGLKGDDSTDCSMAFLYLLCSISIRTNLQKFLGFSPPRG 180

Query: 181 AGAAAGLFPMPDPKTN 194
           A  A GLFPMPDPKTN
Sbjct: 181 AAGAGGLFPMPDPKTN 196

The following BLAST results are available for this feature:

BLAST of Carg03582 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934300.1	2.5e-98	100.00	calcium load-activated calcium channel [Cucurbita moschata] >XP_022983111.1 calc...	[more]
KAG6596248.1	1.4e-93	95.85	Calcium load-activated calcium channel, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022151350.1	1.8e-93	95.85	calcium load-activated calcium channel-like [Momordica charantia]	[more]
XP_038903426.1	2.4e-93	95.85	calcium load-activated calcium channel-like [Benincasa hispida]	[more]
XP_004136557.1	2.4e-93	95.85	calcium load-activated calcium channel [Cucumis sativus]	[more]

BLAST of Carg03582 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3T0N3	5.5e-40	46.70	Calcium load-activated calcium channel OS=Bos taurus OX=9913 GN=TMCO1 PE=2 SV=1	[more]
Q9UM00	5.5e-40	46.70	Calcium load-activated calcium channel OS=Homo sapiens OX=9606 GN=TMCO1 PE=1 SV=...	[more]
Q921L3	5.5e-40	46.70	Calcium load-activated calcium channel OS=Mus musculus OX=10090 GN=Tmco1 PE=1 SV...	[more]
C5HGF3	5.5e-40	46.70	Calcium load-activated calcium channel OS=Sus scrofa OX=9823 GN=TMCO1 PE=2 SV=1	[more]
Q5R9B0	5.5e-40	46.70	Calcium load-activated calcium channel OS=Pongo abelii OX=9601 GN=TMCO1 PE=2 SV=...	[more]

BLAST of Carg03582 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J172	1.2e-98	100.00	Calcium load-activated calcium channel OS=Cucurbita maxima OX=3661 GN=LOC1114817...	[more]
A0A6J1F7A5	1.2e-98	100.00	Calcium load-activated calcium channel OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1DAX6	8.9e-94	95.85	Calcium load-activated calcium channel OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A0A0LGX0	1.2e-93	95.85	Calcium load-activated calcium channel OS=Cucumis sativus OX=3659 GN=Csa_3G79965...	[more]
A0A5A7TQC2	2.6e-93	95.34	Calcium load-activated calcium channel OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of Carg03582 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12030.1	1.0e-86	84.97	Protein of unknown function DUF106, transmembrane	[more]
AT5G06660.1	2.0e-85	84.69	Protein of unknown function DUF106, transmembrane	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 43..63
IPR002809	Integral membrane protein EMC3/TMCO1-like	SMART	SM01415	DUF106_2	coord: 14..174 e-value: 4.4E-37 score: 139.2
IPR002809	Integral membrane protein EMC3/TMCO1-like	PFAM	PF01956	EMC3_TMCO1	coord: 16..173 e-value: 9.8E-31 score: 106.8
IPR008559	Calcium load-activated calcium channel	PIRSF	PIRSF023322	UCP023322_TM_coiled-coil	coord: 5..193 e-value: 1.9E-76 score: 253.8
IPR008559	Calcium load-activated calcium channel	PANTHER	PTHR20917	PNAS-RELATED	coord: 1..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03582-RA	Carg03582-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070588	calcium ion transmembrane transport
biological_process	GO:0032469	endoplasmic reticulum calcium ion homeostasis
cellular_component	GO:0030176	integral component of endoplasmic reticulum membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0005262	calcium channel activity