![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Carg03538 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAATGGGTTTGCTCGAAAGCAATCTCGCTCGAAAATGGGAACTGATTTCTGAAAGAACTTCGTTTTCCCAAGGGATTCAGGCTCTAGCCGATTGAGCCATGGCTTCCACACTATCAACTGTAGAATCGATTGATTTGGACGTTTCTCAGTTCTGCCATACGCCTTTTTACTGGTAATCAATCGACGATCCTTTTGGTTCATCTGCTGAATCCTTCGTGTGAATTATTCTCTATTTTATCATTGTTTCTCTGTTCTTGTACATTTTTTTTTGTTAATATCTTCATGAGGTTCTTCTTACGATATGCTGCGAAAATTTCTCCGGAATCGGATAGGGTATATTTATTAATAATGGAGATTCATACTTATAATACAGTCTTGAATTCGTGTTTCTAAAATGCTGAAGAGGATTTATTGTGGGCTCGATCCTAGGTTTTTGACCTCACAGCGCTGACGAAAAGGAAGTGTAATTAAGTGTTTCGTGCTTTCGATTTTGCAGTGAGGAGAACGTATATTTTCTATGCAAGAAATTATGTACAAACAGAATGGATGATGCAACGGGAGCTGATCTTTTTGTTGTTTTCATTTCTAATGAGAAGAAGCAGGCACGTATGTTATTCTTTCTCTAGTGATTTGGCCATTTCTGAGGATGAATCAGTTCTGCTAAATGACTCTAGGCATTTCTTATTGCTATTCGAAGTATCATTTTTGGCCATTGGTAGCCCTAGGTTTAATAGTGATATTGTGAGATCTCACATTGGTTGGAGAGGAGGAACGAAACATTCTTTATAAGAGTGTGGAAACCTCTCCCTAGTAGACACGTTTTAAAATCGTGAGGTCGACGGCGATACGTAACGGGCCAAAGCGGACAATATTTGCTGGCAGTGAGCTTGGGCTGTTATAGATGGTATCAGAGTCGAGCACCGAACGGTGTGTCAGCGAGGACGCTGGCCCCCCAAGGGGGGTGGATTGTGAGATCCTACATTGGTTGAGGGGAACGAAGCACGCCTTATAAGGGTGTGGAAACCTCTCCCTAGCGTACGCTTTTTAAAACCGTGAGGCTGACAGCGATATGCAATGGGCCAAAGCGGATAATATTTGTTAGTGGCGAGCTTGAGCTGTTACAATGGTATCAGAGTCAGACATCGAACGGTGTGCCAGCAAGGACATTGGGCCCCAAGGGGGTGGATTGTGAGATCTCACATGGTTGAAGAGAGGAACGAAGCATTCTTATAAGGGTGTGGAAACCTCTCCCTAGCATACGCGTTTTAAAACCATGAGGCTGACGACGATATGTAACGGGCCAAGTCGAATAATATTTGCTAGTGTTGGGCTTGGGCTTGGGCTGTTACAGATACGAAGATTCTTGAGGAATTCTATTCATGTTCTCTTATCGGAAGTTCATAGAAAGAAACAGAAAGCTGTTTAGAATAGTAGAAGACGGTTAAAAACATTTGGCACCTCGTAGTTTTCATTGTTTCCTGTTGGAGTTCCCCTTCTAATTCATTTTTGTAACTACACAGTCTCTTGTGTAGCTCTCACTTGGATGTGATTTTTAATCTTTTGCCCTACGGGTTTCTGAAAGGCTTCTCTTGTTTCTCTTTTCATTTTATTTTATCAATGAAATTGTTGTCTTGTTTCTTATTGCAAATGAAGTATTTGCTCTCGAACAAGATTACTCTTAAGCCCGGTATTGATCATTTTGTTCAGGTTAGATAAAATTTTGTTAAAATTCCTCTTTTCCTGAGTGAAATCCTTGTTAACAAATTATAATTCTAACTCCTCCCACTCCCCCAAAAAAATTGTTTAGATTCCCCTTTGGCATCAAAAAGCCAGCAAAAGAGAAGATGGTCTTGTTTTGTGGGATTACCATGTGATTTGCGTTCAGGTAAGATAGTCTATCCTGCTTTAATAATAGTTGTTCGTGTCGTAATTACTCAGCAAGTTGCATCAGATCTTTATTTTGATCATTGTTGCAAGCTTTTATTGTTTTCTACTTTTGAGATGTTGAGCTCATTTCAATTGACAGAGAAAAACAGAAGGTGAATTTCCTTTTATAGTGTGGGATTTAGACTCCACTCTTCCTTTACCTATCCCTCTGGGCAGCTACGTGTCGCAAGCTATCAGGCCATCGTTTCAAATCTCCCCTGAGTATCAAAGGTAAAGCCCGTCAGCTACAACTTTTTTTTTTCTAATGCATACGTCACAATTATCAGGTCGTTGCATTTTATTGGTTGAAAAACATTTGGGACTATGTGTTCTTAAAAGTGTAACTCAAGCTTGACTCATATTGATCAAATTTTTAATCAAAAGCTGCTATTCCTGGGGACAGGCTTTTCAGAATCATCCATGCTCCAATATTTTTTCGTCACTTCGCATCTGATAGAAGGCACATGAAAGATTCCAATGGAAATTGGATTGCTAAACCCCCTGACTATGAAGCCATTGTTGCTGAAGGTAAATGCCTGCCCCTAATGGGTAATCAAATATCATGTTCATGTACGCCGTTGATGCATTGTTTGTTTTGATGATAAACTGGTTGGTGATTGCTTCTGAGTTTCATTTTTATTTATTTGTTTGTTTATTTTATTATTTTTTGGCGAAGAACTGTGTTGAAAAACTTGAGAACTCTTAAATTGGGCATTAACGATTCTGGAAAATTACGTGTTGAATAAAACACCATGGTTGCATGCTTTGCTTTGTCACTTATTTGTCTTAAGTGGATCAATTTCTAGACTAGGCTTCCCTACCATATTTGATAGGAGTTTTAGGAACTAGAAAGCTTACTATTGGTTTAAATGATGATTGTGGCTATGTCATCCAACCTGTCTATTAATTGTGAACTCTCTAAGCTGTCTTCTTAGGCGTCTCTCTTGGGTTGTGAGGTGAACATTTGGCCTTGGTCCCGGAAAAGTTTAAAAAATGTCTCTCCTCTTGGAGAAATGCCTTTTTTTTTTTTTCAAGCGAGGGAGAGTTACCTTGTAACGGCCCAAACCCATTGCTAGCAGGCATTGTCCTATTTAGGCTTTCCCTTTTGAGTTTCCCCTCAAGGTTTTTAAAACGCGAGTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCATTCTCCTCCCCAACTGATGTGGGATCTCACAATCCACCCCCTTCAGGGTCCAGCATCCTCACTGACACTCATTCCCTTCTCCAATTGATGTGGGACCCTCAATCCAACCCCTTTGGGGCCAGCGTCCTTGTTGGCACACCATTTCATGTCCACCCCCTTTGAGGCTTAGCCTCCTTGCTAGCACATCACCCGGTATCTGGCTCTGATACCATTTGTAACGGTCCAAGCCCACCACTAGCAGTATTGTCCTCTTTAGGCTTTTCCTTTTGAGCTTTCCCTCAAGGTTTTCGAGGTTCTTAAAACGCGTCCGCTAGGGAGAGGTTTCCACGTTCTTACAAAGAATGTTTCGTTCTTCTCCCTAATCGATGTGAGATCCCACATGGAAGAAACTATTAATTTTGATTTTTAGTTTATTGTTCAAAACCAGTTTTGAAGTTTGAAATCTAAAATGTTTCTAGATAGAATATCTATTGAATGTCCTTGGCTTTACTTGTTTGAACTCAAGGTTGACGACGATATTCTTTTGATGTTTCCTCATGTACTGTCCTGGATATCAGATGGAACTATTCACAACCTGTATGAGTACATGGAGATCAAGGCGGCCGATGTATTTACGAACAACATCGATGTGAAAGATGCAGTTTTTTCTCAAAAACTTGGAGCGGTCGCAAATGATCTGGAGGAGTTTTTCTCACAAATTCTTTAAACAAGAATGAGAAAGATCTGGTATGCATCTGAAAGGTTATGTTTCCCTCTCTATACTTGAAACTTGAAAGTCTGATGATTACTTGAAAGTTGGGTTCAATGCATTGTTTTACCCTGAAAAACCCTGGAGCTGCTTTCTCAAATTAGGAATTTTATAGTCATTTATTAAGTTTATGCGGTTGCTTATGCATGTAGTGATACTGACTGGGGTCCTGGGGATGGATTATCGTGCTACCTCTCTAGAGTTCAGCCCATTGGAACCGGTTGCTAACTTGTAAGATATTTTTAATAATCACTTTCAAGGCCCTCCCAGGAAGGAGGAGAGAAATTTTAAAATAATCTTTTGATTCGGGATTTTGAAAACCATGTGTCACGGTTGTACTTTTTCAACCGTGCGGCGTCGTGATCTTGACACGCTCACGACCAGCCTTAAGGG GAAAAATGGGTTTGCTCGAAAGCAATCTCGCTCGAAAATGGGAACTGATTTCTGAAAGAACTTCGTTTTCCCAAGGGATTCAGGCTCTAGCCGATTGAGCCATGGCTTCCACACTATCAACTGTAGAATCGATTGATTTGGACGTTTCTCAGTTCTGCCATACGCCTTTTTACTGTGAGGAGAACGTATATTTTCTATGCAAGAAATTATGTACAAACAGAATGGATGATGCAACGGGAGCTGATCTTTTTGTTATTCCCCTTTGGCATCAAAAAGCCAGCAAAAGAGAAGATGGTCTTGTTTTGTGGGATTACCATGTGATTTGCGTTCAGAGAAAAACAGAAGGTGAATTTCCTTTTATAGTGTGGGATTTAGACTCCACTCTTCCTTTACCTATCCCTCTGGGCAGCTACGTGTCGCAAGCTATCAGGCCATCGTTTCAAATCTCCCCTGAGTATCAAAGGCTTTTCAGAATCATCCATGCTCCAATATTTTTTCGTCACTTCGCATCTGATAGAAGGCACATGAAAGATTCCAATGGAAATTGGATTGCTAAACCCCCTGACTATGAAGCCATTGTTGCTGAAGATGGAACTATTCACAACCTGTATGAGTACATGGAGATCAAGGCGGCCGATGTATTTACGAACAACATCGATGTGAAAGATGCAGTTTTTTCTCAAAAACTTGGAGCGGTCGCAAATGATCTGGAGGAGTTTTTCTCACAAATTCTTTAAACAAGAATGAGAAAGATCTGGTATGCATCTGAAAGGTTATGTTTCCCTCTCTATACTTGAAACTTGAAAGTCTGATGATTACTTGAAAGTTGGGTTCAATGCATTGTTTTACCCTGAAAAACCCTGGAGCTGCTTTCTCAAATTAGGAATTTTATAGTCATTTATTAAGTTTATGCGGTTGCTTATGCATGTAGTGATACTGACTGGGGTCCTGGGGATGGATTATCGTGCTACCTCTCTAGAGTTCAGCCCATTGGAACCGGTTGCTAACTTGTAAGATATTTTTAATAATCACTTTCAAGGCCCTCCCAGGAAGGAGGAGAGAAATTTTAAAATAATCTTTTGATTCGGGATTTTGAAAACCATGTGTCACGGTTGTACTTTTTCAACCGTGCGGCGTCGTGATCTTGACACGCTCACGACCAGCCTTAAGGG ATGGCTTCCACACTATCAACTGTAGAATCGATTGATTTGGACGTTTCTCAGTTCTGCCATACGCCTTTTTACTGTGAGGAGAACGTATATTTTCTATGCAAGAAATTATGTACAAACAGAATGGATGATGCAACGGGAGCTGATCTTTTTGTTATTCCCCTTTGGCATCAAAAAGCCAGCAAAAGAGAAGATGGTCTTGTTTTGTGGGATTACCATGTGATTTGCGTTCAGAGAAAAACAGAAGGTGAATTTCCTTTTATAGTGTGGGATTTAGACTCCACTCTTCCTTTACCTATCCCTCTGGGCAGCTACGTGTCGCAAGCTATCAGGCCATCGTTTCAAATCTCCCCTGAGTATCAAAGGCTTTTCAGAATCATCCATGCTCCAATATTTTTTCGTCACTTCGCATCTGATAGAAGGCACATGAAAGATTCCAATGGAAATTGGATTGCTAAACCCCCTGACTATGAAGCCATTGTTGCTGAAGATGGAACTATTCACAACCTGTATGAGTACATGGAGATCAAGGCGGCCGATGTATTTACGAACAACATCGATGTGAAAGATGCAGTTTTTTCTCAAAAACTTGGAGCGGTCGCAAATGATCTGGAGGAGTTTTTCTCACAAATTCTTTAA MASTLSTVESIDLDVSQFCHTPFYCEENVYFLCKKLCTNRMDDATGADLFVIPLWHQKASKREDGLVLWDYHVICVQRKTEGEFPFIVWDLDSTLPLPIPLGSYVSQAIRPSFQISPEYQRLFRIIHAPIFFRHFASDRRHMKDSNGNWIAKPPDYEAIVAEDGTIHNLYEYMEIKAADVFTNNIDVKDAVFSQKLGAVANDLEEFFSQIL Homology
BLAST of Carg03538 vs. NCBI nr
Match: KAG7017588.1 (Protein N-terminal glutamine amidohydrolase [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 443.7 bits (1140), Expect = 8.7e-121 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
BLAST of Carg03538 vs. NCBI nr
Match: KAG6580833.1 (Protein N-terminal glutamine amidohydrolase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 436.0 bits (1120), Expect = 1.8e-118 Identity = 211/220 (95.91%), Postives = 211/220 (95.91%), Query Frame = 0
BLAST of Carg03538 vs. NCBI nr
Match: XP_023527265.1 (protein N-terminal glutamine amidohydrolase isoform X1 [Cucurbita pepo subsp. pepo] >XP_023527266.1 protein N-terminal glutamine amidohydrolase isoform X1 [Cucurbita pepo subsp. pepo] >XP_023527267.1 protein N-terminal glutamine amidohydrolase isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 433.7 bits (1114), Expect = 9.0e-118 Identity = 209/220 (95.00%), Postives = 211/220 (95.91%), Query Frame = 0
BLAST of Carg03538 vs. NCBI nr
Match: XP_022935429.1 (protein N-terminal glutamine amidohydrolase isoform X2 [Cucurbita moschata]) HSP 1 Score: 431.4 bits (1108), Expect = 4.5e-117 Identity = 208/220 (94.55%), Postives = 210/220 (95.45%), Query Frame = 0
BLAST of Carg03538 vs. NCBI nr
Match: XP_022935426.1 (protein N-terminal glutamine amidohydrolase isoform X1 [Cucurbita moschata] >XP_022935427.1 protein N-terminal glutamine amidohydrolase isoform X1 [Cucurbita moschata] >XP_022935428.1 protein N-terminal glutamine amidohydrolase isoform X1 [Cucurbita moschata]) HSP 1 Score: 424.5 bits (1090), Expect = 5.4e-115 Identity = 208/238 (87.39%), Postives = 210/238 (88.24%), Query Frame = 0
BLAST of Carg03538 vs. ExPASy Swiss-Prot
Match: O22944 (Protein N-terminal glutamine amidohydrolase OS=Arabidopsis thaliana OX=3702 GN=NTAQ1 PE=1 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 1.4e-68 Identity = 122/216 (56.48%), Postives = 158/216 (73.15%), Query Frame = 0
BLAST of Carg03538 vs. ExPASy Swiss-Prot
Match: B8AXU2 (Protein N-terminal glutamine amidohydrolase OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19806 PE=3 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 3.5e-56 Identity = 112/210 (53.33%), Postives = 138/210 (65.71%), Query Frame = 0
BLAST of Carg03538 vs. ExPASy Swiss-Prot
Match: Q60E61 (Protein N-terminal glutamine amidohydrolase OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0387900 PE=2 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.3e-55 Identity = 111/210 (52.86%), Postives = 138/210 (65.71%), Query Frame = 0
BLAST of Carg03538 vs. ExPASy Swiss-Prot
Match: Q5BJV9 (Protein N-terminal glutamine amidohydrolase OS=Rattus norvegicus OX=10116 GN=Ntaq1 PE=2 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 4.4e-27 Identity = 58/162 (35.80%), Postives = 98/162 (60.49%), Query Frame = 0
BLAST of Carg03538 vs. ExPASy Swiss-Prot
Match: Q80WB5 (Protein N-terminal glutamine amidohydrolase OS=Mus musculus OX=10090 GN=Ntaq1 PE=1 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 9.9e-27 Identity = 58/162 (35.80%), Postives = 97/162 (59.88%), Query Frame = 0
BLAST of Carg03538 vs. ExPASy TrEMBL
Match: A0A6J1F5D8 (Protein N-terminal glutamine amidohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111442308 PE=3 SV=1) HSP 1 Score: 431.4 bits (1108), Expect = 2.2e-117 Identity = 208/220 (94.55%), Postives = 210/220 (95.45%), Query Frame = 0
BLAST of Carg03538 vs. ExPASy TrEMBL
Match: A0A6J1FAI6 (Protein N-terminal glutamine amidohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111442308 PE=3 SV=1) HSP 1 Score: 424.5 bits (1090), Expect = 2.6e-115 Identity = 208/238 (87.39%), Postives = 210/238 (88.24%), Query Frame = 0
BLAST of Carg03538 vs. ExPASy TrEMBL
Match: A0A6J1J152 (Protein N-terminal glutamine amidohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111481742 PE=3 SV=1) HSP 1 Score: 422.9 bits (1086), Expect = 7.7e-115 Identity = 205/220 (93.18%), Postives = 206/220 (93.64%), Query Frame = 0
BLAST of Carg03538 vs. ExPASy TrEMBL
Match: A0A6J1J6B3 (Protein N-terminal glutamine amidohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111481742 PE=3 SV=1) HSP 1 Score: 416.0 bits (1068), Expect = 9.4e-113 Identity = 205/238 (86.13%), Postives = 206/238 (86.55%), Query Frame = 0
BLAST of Carg03538 vs. ExPASy TrEMBL
Match: A0A0A0LEK5 (Protein N-terminal glutamine amidohydrolase OS=Cucumis sativus OX=3659 GN=Csa_3G812210 PE=3 SV=1) HSP 1 Score: 390.2 bits (1001), Expect = 5.5e-105 Identity = 189/221 (85.52%), Postives = 199/221 (90.05%), Query Frame = 0
BLAST of Carg03538 vs. TAIR 10
Match: AT2G41760.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function WDYHV (InterPro:IPR019161); Has 201 Blast hits to 201 proteins in 90 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi - 10; Plants - 30; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). ) HSP 1 Score: 260.8 bits (665), Expect = 9.7e-70 Identity = 122/216 (56.48%), Postives = 158/216 (73.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|