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Carg03531 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAAATTTGTGGAATTGTTGGATGTAGGAGTGAGAATGGCGGCGAGATTTCACGCTCACTGTCCCCAAACTGCTCGGCTTTACTATCATCCTCCCTCCGATCACGACGGCGACAACCACCACAACTATCTGCATCAGTTTTTTCAGGCCAGCGATGGCTTCCGGCACGGCGGACACTCGACGGACCTGGTGACGGGCTGTGGAGTGGAGACGGTAGCTATGGCTAGGGGTTTTGATGCCGAGATCGTGTTTCATACGGCAGATTTTTGA ATGGCGAAATTTGTGGAATTGTTGGATGTAGGAGTGAGAATGGCGGCGAGATTTCACGCTCACTGTCCCCAAACTGCTCGGCTTTACTATCATCCTCCCTCCGATCACGACGGCGACAACCACCACAACTATCTGCATCAGTTTTTTCAGGCCAGCGATGGCTTCCGGCACGGCGGACACTCGACGGACCTGGTGACGGGCTGTGGAGTGGAGACGGTAGCTATGGCTAGGGGTTTTGATGCCGAGATCGTGTTTCATACGGCAGATTTTTGA ATGGCGAAATTTGTGGAATTGTTGGATGTAGGAGTGAGAATGGCGGCGAGATTTCACGCTCACTGTCCCCAAACTGCTCGGCTTTACTATCATCCTCCCTCCGATCACGACGGCGACAACCACCACAACTATCTGCATCAGTTTTTTCAGGCCAGCGATGGCTTCCGGCACGGCGGACACTCGACGGACCTGGTGACGGGCTGTGGAGTGGAGACGGTAGCTATGGCTAGGGGTTTTGATGCCGAGATCGTGTTTCATACGGCAGATTTTTGA MAKFVELLDVGVRMAARFHAHCPQTARLYYHPPSDHDGDNHHNYLHQFFQASDGFRHGGHSTDLVTGCGVETVAMARGFDAEIVFHTADF Homology
BLAST of Carg03531 vs. NCBI nr
Match: KAG6580839.1 (hypothetical protein SDJN03_20841, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017595.1 hypothetical protein SDJN02_19461, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 193.7 bits (491), Expect = 6.7e-46 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Carg03531 vs. NCBI nr
Match: XP_008443147.1 (PREDICTED: uncharacterized protein LOC103486822 [Cucumis melo] >KAA0043681.1 uncharacterized protein E6C27_scaffold236G00060 [Cucumis melo var. makuwa] >TYK25450.1 uncharacterized protein E5676_scaffold352G005960 [Cucumis melo var. makuwa]) HSP 1 Score: 146.0 bits (367), Expect = 1.6e-31 Identity = 70/92 (76.09%), Postives = 78/92 (84.78%), Query Frame = 0
BLAST of Carg03531 vs. NCBI nr
Match: KAG7027749.1 (hypothetical protein SDJN02_08926, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 142.9 bits (359), Expect = 1.3e-30 Identity = 69/86 (80.23%), Postives = 73/86 (84.88%), Query Frame = 0
BLAST of Carg03531 vs. NCBI nr
Match: KAG6596209.1 (hypothetical protein SDJN03_09389, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 142.9 bits (359), Expect = 1.3e-30 Identity = 69/86 (80.23%), Postives = 73/86 (84.88%), Query Frame = 0
BLAST of Carg03531 vs. NCBI nr
Match: KGN59359.1 (hypothetical protein Csa_002350 [Cucumis sativus]) HSP 1 Score: 137.5 bits (345), Expect = 5.7e-29 Identity = 69/93 (74.19%), Postives = 76/93 (81.72%), Query Frame = 0
BLAST of Carg03531 vs. ExPASy TrEMBL
Match: A0A5A7TQ55 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005960 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 7.7e-32 Identity = 70/92 (76.09%), Postives = 78/92 (84.78%), Query Frame = 0
BLAST of Carg03531 vs. ExPASy TrEMBL
Match: A0A1S3B7E5 (uncharacterized protein LOC103486822 OS=Cucumis melo OX=3656 GN=LOC103486822 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 7.7e-32 Identity = 70/92 (76.09%), Postives = 78/92 (84.78%), Query Frame = 0
BLAST of Carg03531 vs. ExPASy TrEMBL
Match: A0A0A0LEL3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G813040 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 2.7e-29 Identity = 69/93 (74.19%), Postives = 76/93 (81.72%), Query Frame = 0
BLAST of Carg03531 vs. ExPASy TrEMBL
Match: A0A6J1DN79 (uncharacterized protein LOC111021559 OS=Momordica charantia OX=3673 GN=LOC111021559 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 5.7e-27 Identity = 71/93 (76.34%), Postives = 73/93 (78.49%), Query Frame = 0
BLAST of Carg03531 vs. ExPASy TrEMBL
Match: A0A059DI68 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_A02353 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.2e-13 Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 0
BLAST of Carg03531 vs. TAIR 10
Match: AT3G57450.1 (unknown protein; Has 65 Blast hits to 65 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 76.3 bits (186), Expect = 1.4e-14 Identity = 39/72 (54.17%), Postives = 47/72 (65.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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