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Carg03434 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGAGAAAGATTCATATTCCCGAGTGCTTTCGCCATTGTTGGAGCTTCAGTTTTCAGCCGAAACGCCTGATTTCCCCTCTCGGTTGCCGACAAGGTATGATAGGTTATTTCCCACTTTCTTGGGGGTTTCTGTTTGAAATCTGATTCACTCTATTCGTCTAATCTGCCACTTTCCGAGCTGGTTTTTACATTGATTCATGTTGAACTCATATGGTGATTGATTGATGAATTTCTGGGTTAGATTTGATTGGAAATTGACTCGTGCGTAGGAGGACTTGATCTGTATGAATGATTGTGCATCTTCTAGGATTTCTCGAACGATCTTTTATGGCATCAGCTCGTTTCTTTTTGTTCTTGATTATATTCATTTGTTGTTTTCATTTTCTGTTACTTTGGGGCTCAAATAAGCTTCGGAGTGTTGCAGATCTTTCGCTTCCTAACGCGCCGATGTGGAAGTGGGTAGTGCTGAAAAGAATTGATGCCCACTGTGTGTATCAATGGGTTCTTTCCTAAATGTCGTGGTTATTGTCGGGGCTTAATAGTGGAAGCCATTTGGATGTCTCTAATTTCTGATCGATTTCTGGACAGATGAAGGAGTTCTCTTGGTGTGTCTTGGTAGGGGTGTTGGCATGGTTCGTGATTGGCTTGAACGCTAGTGCTGGCGATATTGACCCACAATACAGGTACCATTTCTTTGCATATTCTTCAGCTTTATTCAAATTAGTGAAGACTGGAGACCTCAAATTGTGAAATCCCACCGGTTGGAGAGGAGAACGAAACATCCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACACGCTTTGAAACCTTGAGAGGTAGCTCGAAACGGAAAGCTAAAAAAGGACAATATTTGCTAGCTATGGGCTTAGGCTGTTACAAATAGTATTAAAGTCAGACATCAGGCGGTGTACCAGAGATAACGCAGGCCTCCAAGGGAGGTGGAGAGGAGAACGAAACATTTCTTATAAGGGTATAGAAACCTCTCCCCAGCATGCTAGCACATCAATGATATCACCATTCATGCTGCCTACTCCTGTTTTAATTCTGGCTGTGTAAAGAAATTTAAATGATGCTAAGCTAATGTCATAGAGTTTTTATAGTACCTTTTTTTCTAGTTTTGTTTGTTAAGGGACTGGCTAATGGAAGGTAATGTCTGAGACAGGAAGAAGTAGGCCATTATCTCGACAATATTGAGCTAAGCTAGTATTTGCCGTGAATCCATTTGTTAAGTAGTCATGCATTACGATCGGAACTCCCAATTATTGAGCAAATATAGCCCTTTCCATCATTTCTTTGCATACCGCCTTTTTACTTATAATATATGTAAAAAGAGTCGGTCATGGTCCAAAATATGAAGAAACTCCCCGCCAATTCTGTTCCACTTAATCCCTATTTCATGGCCACATATTTTTCCGGCTAAGGAATGGGAAGCCTTTCTCTTATTACATGAATCCAATTTTCATTTCATTTGGAAAAAGTCATCTTTTTCTCGACAATGTCTTTGTCATTTGATCCAATAGCGTTTCGTTAGACAGGAACAAATTTGATAAATACTAATAACTCTCGGATGGAGTATTAGAACGGAAAAATCCATTAGATAATGAACTAATGGTTCTAAGCCATTTGTGGCAATGAATCAACAATCTGAAGTGTTTTTCTTGCATATTCTTGATAAACCAGCGTTTATATATAGATGTAGGAGGATCTGTTTGGTAAGTAAGCAGCCCCTTTGACATTGTTTCGTCTGCAGAGAATTCTCTTTTTCCTTAGTGTTCCATGGACTTGGTATTCAATCTTATCAGTGCAGTGGCTAACTTTTGTGCATCCAAGGTTTCTTTTAGTGCATTATTGTGCATGGAGGTTAGATGTATCAGTTTTTGTGATTGTTTGTTCCTAAAACCTCGCTCATCTTTGTTTTTATTCATGGATAGTAACTCTTTCATTATTTCAGCGATTCATTCAATTTTGTATTCACTTGCAGGACTTGCATAAAACACTGTGAAGAAACAGGATGCATTGATCAGCAATGCTTCCCTCAGTGCAAATTCTCTTCAGATGGCGTTTCTGTTGATCAGCCATGGTATATGCAAGAACCACTTTACATAAGGTGGAAGCAATGGGACTGCCAAAGTGATTGCCGTTACCATTGCATGGTCAAACGAGAGGGCGAAAGAGAAGCACTTGGCTATCATCCTGTTAAATATCATGGCAAATGGCCCTTCAAGCGTATATATGGAATCCAGGTTTGTTTTATCAAATTGCTGAGTATGAATTTGGGATTGAAATGATACCTGTTCATATTTATGAGTATTGTTTGTGCATTATTTGCACAGGAACCTGTTTCTGTAGCATTCTCTGCTCTGAACCTTTCAATGCATTTCCATGGCTGGCTGTCCTTTTTTATCCTTCTATATTATAAGTTACCTTTGAGACAAGACAAGAAGGCACATTATGAATTTGCCAGTTTGTGGCACATTTATGCACTCTTTGCAATGAACTCTTGGTTTTGGAGTGCTGTTTTCCACAGTCGGTGAGCCTTCGAATTCTGTCTTCATCAATTGTTGCAAATCACCTGTTTATATCTTTATAGCACGCCCTGATTGTTATTACATGCCATTGAAGTGCAGTGATGTGGTTCTGACAGAGAAATTGGATTACTCATCTGCTGTGGCATTACTTGGGTTTTCACTCATTCTGGCAATTCTAAGAAGTTTCAATGCGAGGCATGAGGCTACCAGAGTCATGGTTGCAGCTCCTTTGCTTGCTTTTGCACTTACGCATATCTTATACATCAACTTTTACGAGCTTGATTATGGTAATTGTTACTCTTTTTTTACCCCTTCCTGCACTGCTAGGCTCTGAGAAATTGAACCAATATGAGATCCCACATCGGTTAGAGAAGGGAACGAAGCATTCCTTGTAAGGGTGTGTAAACCTCTCCTTAGAATATGTGTTTTAAAAACCGTGAGGCTGACGGTGATATGTAATGAGCCAAATCGGACAATATCTGCTAGTAGTAGGCTTGAGCTGTTACAAATGGTATCAGAGCCAGATACCAAGTGGTGTGCCAGCAAGGACGCTGGACCCCCAAAGAGGGTGGATTGTGAGATCCCACATCGGTTAGAGAGGGGAACGAAACATTCCTTGTAAGAGTGTGGAAACCTCTCCCTAGCATTAATGTTTTAAACACTGTGAGGCTGACCGAATGTAATGGTCCAAATCGGACAATACTAGCGGTGAGCTTGGGCTGTTACAAACAATCTTATAATACAATTTCTCTAGTTAGTTTATCAAGTTTACTGCATCCTTTTTTCTTCATGCAAGCTATTCTTCTAAATTTGTTCCCTCATATTCAAATCAAACGGCCCAAGCTTGGTGATGAGAAGGCCCCGTACTCCTTTTGACTTTATTATCATCATCTGGTGTGTTGTGTGCGTCTACTAGGGAGAAGTTTCCACATCCTTATAGGAATGTTTCCTTCCCCTCTCTAATCGATGTGCTATGGGTATGGGTATGGTTTGTAAGTAAGGGCCGAGTCGTCAAGGTGGAAATCTAAGGCCGAATATGACTTTAACATCTGGGTCATGAGAATTAACCAAAAACTTGTGACATTTTGTAGGGTGGAACATGATCGTGTGTGTTACCATGGGGTTGTCTCAACTTCTGATTTGGGCAATCTGGGCTGGTGTCACCCACCATCCTTCTCGGTGGAAAGTGTGGACGGTGGTTGTGGGCGGTGGGTTAGCATTACTACTGGAAATCTATGATTTCCCACCACACGAAGGGCTCATAGATGCTCATGCTCTGTGGCACGCCACAACCATCCCCCTGACCTATGTGTGGTGGAGTTTCATCAGAGATGATGCTGAGTTTCAGACCTCCAATCTTGTCAAGAAGGCCAAGTAAGGCTGTTCTTGTTTCATAGGGGTGTTACAGGAGCTTACACTTTGTTCCCCTTCCCTTCCATTCATTTGAAACTGGAAAAAGAAAGATTAGGCGTTGTTGTATAACAAATGTTGCAGTTCTTAGGAGAACCAGGCTGAGAAGCCTGTATTGTACCAGATCTTGGTTCTTGGTCTTTTACACATATTTTTTTGTTTGAATGCGTTGAAGATGGATTCACAGCTATCAATA ATGGGAAGAGAAAGATTCATATTCCCGAGTGCTTTCGCCATTTTTTCAGCCGAAACGCCTGATTTCCCCTCTCGGTTGCCGACAAGGACTTGCATAAAACACTGTGAAGAAACAGGATGCATTGATCAGCAATGCTTCCCTCAGTGCAAATTCTCTTCAGATGGCGTTTCTGTTGATCAGCCATGGTATATGCAAGAACCACTTTACATAAGGTGGAAGCAATGGGACTGCCAAAGTGATTGCCGTTACCATTGCATGGTCAAACGAGAGGGCGAAAGAGAAGCACTTGGCTATCATCCTGTTAAATATCATGGCAAATGGCCCTTCAAGCGTATATATGGAATCCAGTTACCTTTGAGACAAGACAAGAAGGCACATTATGAATTTGCCAGTTTGTGGCACATTTATGCACTCTTTGCAATGAACTCTTGGTTTTGGAGTGCTGTTTTCCACAGTCGTGATGTGGTTCTGACAGAGAAATTGGATTACTCATCTGCTGTGGCATTACTTGGGTTTTCACTCATTCTGGCAATTCTAAGAAGGTGGAACATGATCGTGTGTGTTACCATGGGGTTGTCTCAACTTCTGATTTGGGCAATCTGGGCTGGTGTCACCCACCATCCTTCTCGGTGGAAAGTGTGGACGGTGGTTGTGGGCGGTGGGTTAGCATTACTACTGGAAATCTATGATTTCCCACCACACGAAGGGCTCATAGATGCTCATGCTCTGTGGCACGCCACAACCATCCCCCTGACCTATGTGTGGTGGAGTTTCATCAGAGATGATGCTGAGTTTCAGACCTCCAATCTTGTCAAGAAGGCCAAGTAAGGCTGTTCTTGTTTCATAGGGGTGTTACAGGAGCTTACACTTTGTTCCCCTTCCCTTCCATTCATTTGAAACTGGAAAAAGAAAGATTAGGCGTTGTTGTATAACAAATGTTGCAGTTCTTAGGAGAACCAGGCTGAGAAGCCTGTATTGTACCAGATCTTGGTTCTTGGTCTTTTACACATATTTTTTTGTTTGAATGCGTTGAAGATGGATTCACAGCTATCAATA ATGGGAAGAGAAAGATTCATATTCCCGAGTGCTTTCGCCATTTTTTCAGCCGAAACGCCTGATTTCCCCTCTCGGTTGCCGACAAGGACTTGCATAAAACACTGTGAAGAAACAGGATGCATTGATCAGCAATGCTTCCCTCAGTGCAAATTCTCTTCAGATGGCGTTTCTGTTGATCAGCCATGGTATATGCAAGAACCACTTTACATAAGGTGGAAGCAATGGGACTGCCAAAGTGATTGCCGTTACCATTGCATGGTCAAACGAGAGGGCGAAAGAGAAGCACTTGGCTATCATCCTGTTAAATATCATGGCAAATGGCCCTTCAAGCGTATATATGGAATCCAGTTACCTTTGAGACAAGACAAGAAGGCACATTATGAATTTGCCAGTTTGTGGCACATTTATGCACTCTTTGCAATGAACTCTTGGTTTTGGAGTGCTGTTTTCCACAGTCGTGATGTGGTTCTGACAGAGAAATTGGATTACTCATCTGCTGTGGCATTACTTGGGTTTTCACTCATTCTGGCAATTCTAAGAAGGTGGAACATGATCGTGTGTGTTACCATGGGGTTGTCTCAACTTCTGATTTGGGCAATCTGGGCTGGTGTCACCCACCATCCTTCTCGGTGGAAAGTGTGGACGGTGGTTGTGGGCGGTGGGTTAGCATTACTACTGGAAATCTATGATTTCCCACCACACGAAGGGCTCATAGATGCTCATGCTCTGTGGCACGCCACAACCATCCCCCTGACCTATGTGTGGTGGAGTTTCATCAGAGATGATGCTGAGTTTCAGACCTCCAATCTTGTCAAGAAGGCCAAGTAA MGRERFIFPSAFAIFSAETPDFPSRLPTRTCIKHCEETGCIDQQCFPQCKFSSDGVSVDQPWYMQEPLYIRWKQWDCQSDCRYHCMVKREGEREALGYHPVKYHGKWPFKRIYGIQLPLRQDKKAHYEFASLWHIYALFAMNSWFWSAVFHSRDVVLTEKLDYSSAVALLGFSLILAILRRWNMIVCVTMGLSQLLIWAIWAGVTHHPSRWKVWTVVVGGGLALLLEIYDFPPHEGLIDAHALWHATTIPLTYVWWSFIRDDAEFQTSNLVKKAK Homology
BLAST of Carg03434 vs. NCBI nr
Match: KAG7010434.1 (Post-GPI attachment to proteins factor 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 596.3 bits (1536), Expect = 1.4e-166 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0
BLAST of Carg03434 vs. NCBI nr
Match: XP_022943612.1 (post-GPI attachment to proteins factor 3-like isoform X1 [Cucurbita moschata] >XP_022943613.1 post-GPI attachment to proteins factor 3-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 502.7 bits (1293), Expect = 2.1e-138 Identity = 245/311 (78.78%), Postives = 246/311 (79.10%), Query Frame = 0
BLAST of Carg03434 vs. NCBI nr
Match: XP_022943614.1 (post-GPI attachment to proteins factor 3-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 502.7 bits (1293), Expect = 2.1e-138 Identity = 245/311 (78.78%), Postives = 246/311 (79.10%), Query Frame = 0
BLAST of Carg03434 vs. NCBI nr
Match: KAG6570581.1 (Post-GPI attachment to proteins factor 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 499.6 bits (1285), Expect = 1.7e-137 Identity = 245/311 (78.78%), Postives = 245/311 (78.78%), Query Frame = 0
BLAST of Carg03434 vs. NCBI nr
Match: XP_023511894.1 (post-GPI attachment to proteins factor 3-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023511895.1 post-GPI attachment to proteins factor 3-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 497.3 bits (1279), Expect = 8.6e-137 Identity = 243/311 (78.14%), Postives = 245/311 (78.78%), Query Frame = 0
BLAST of Carg03434 vs. ExPASy Swiss-Prot
Match: A8WFS8 (Post-GPI attachment to proteins factor 3 OS=Danio rerio OX=7955 GN=pgap3 PE=2 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 3.3e-30 Identity = 87/315 (27.62%), Postives = 141/315 (44.76%), Query Frame = 0
BLAST of Carg03434 vs. ExPASy Swiss-Prot
Match: Q68EV0 (Post-GPI attachment to proteins factor 3 OS=Xenopus laevis OX=8355 GN=pgap3 PE=2 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 7.3e-30 Identity = 85/291 (29.21%), Postives = 125/291 (42.96%), Query Frame = 0
BLAST of Carg03434 vs. ExPASy Swiss-Prot
Match: Q0VFE3 (Post-GPI attachment to proteins factor 3 OS=Xenopus tropicalis OX=8364 GN=pgap3 PE=2 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 3.6e-29 Identity = 82/291 (28.18%), Postives = 122/291 (41.92%), Query Frame = 0
BLAST of Carg03434 vs. ExPASy Swiss-Prot
Match: A2A559 (Post-GPI attachment to proteins factor 3 OS=Mus musculus OX=10090 GN=Pgap3 PE=2 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 8.9e-28 Identity = 88/293 (30.03%), Postives = 127/293 (43.34%), Query Frame = 0
BLAST of Carg03434 vs. ExPASy Swiss-Prot
Match: A2V7M9 (Post-GPI attachment to proteins factor 3 OS=Cricetulus griseus OX=10029 GN=PGAP3 PE=2 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.2e-27 Identity = 89/292 (30.48%), Postives = 128/292 (43.84%), Query Frame = 0
BLAST of Carg03434 vs. ExPASy TrEMBL
Match: A0A6J1FX71 (Post-GPI attachment to proteins factor 3 OS=Cucurbita moschata OX=3662 GN=LOC111448328 PE=3 SV=1) HSP 1 Score: 502.7 bits (1293), Expect = 9.9e-139 Identity = 245/311 (78.78%), Postives = 246/311 (79.10%), Query Frame = 0
BLAST of Carg03434 vs. ExPASy TrEMBL
Match: A0A6J1FUV6 (Post-GPI attachment to proteins factor 3 OS=Cucurbita moschata OX=3662 GN=LOC111448328 PE=3 SV=1) HSP 1 Score: 502.7 bits (1293), Expect = 9.9e-139 Identity = 245/311 (78.78%), Postives = 246/311 (79.10%), Query Frame = 0
BLAST of Carg03434 vs. ExPASy TrEMBL
Match: A0A6J1J9U3 (Post-GPI attachment to proteins factor 3 OS=Cucurbita maxima OX=3661 GN=LOC111483867 PE=3 SV=1) HSP 1 Score: 491.9 bits (1265), Expect = 1.8e-135 Identity = 240/314 (76.43%), Postives = 245/314 (78.03%), Query Frame = 0
BLAST of Carg03434 vs. ExPASy TrEMBL
Match: A0A6J1J6E6 (Post-GPI attachment to proteins factor 3 OS=Cucurbita maxima OX=3661 GN=LOC111483867 PE=3 SV=1) HSP 1 Score: 491.9 bits (1265), Expect = 1.8e-135 Identity = 240/314 (76.43%), Postives = 245/314 (78.03%), Query Frame = 0
BLAST of Carg03434 vs. ExPASy TrEMBL
Match: A0A5D3DVT4 (Post-GPI attachment to proteins factor 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22G00640 PE=3 SV=1) HSP 1 Score: 479.6 bits (1233), Expect = 9.0e-132 Identity = 236/339 (69.62%), Postives = 252/339 (74.34%), Query Frame = 0
BLAST of Carg03434 vs. TAIR 10
Match: AT1G16560.1 (Per1-like family protein ) HSP 1 Score: 374.4 bits (960), Expect = 7.8e-104 Identity = 183/333 (54.95%), Postives = 214/333 (64.26%), Query Frame = 0
BLAST of Carg03434 vs. TAIR 10
Match: AT1G16560.2 (Per1-like family protein ) HSP 1 Score: 374.4 bits (960), Expect = 7.8e-104 Identity = 183/333 (54.95%), Postives = 214/333 (64.26%), Query Frame = 0
BLAST of Carg03434 vs. TAIR 10
Match: AT1G16560.3 (Per1-like family protein ) HSP 1 Score: 374.4 bits (960), Expect = 7.8e-104 Identity = 183/333 (54.95%), Postives = 214/333 (64.26%), Query Frame = 0
BLAST of Carg03434 vs. TAIR 10
Match: AT5G62130.2 (Per1-like family protein ) HSP 1 Score: 293.1 bits (749), Expect = 2.3e-79 Identity = 140/311 (45.02%), Postives = 188/311 (60.45%), Query Frame = 0
BLAST of Carg03434 vs. TAIR 10
Match: AT5G62130.1 (Per1-like family protein ) HSP 1 Score: 292.0 bits (746), Expect = 5.1e-79 Identity = 139/311 (44.69%), Postives = 188/311 (60.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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