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Carg03354 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGAATCGAATAGCGAGTTCGGAAACTCCGAGACCAGCCGATTTCTTCGAAGTCGAAATCCATCGCCGCCCTTCTACCCGAAGTTTGTGGCGGCGCATGCTCTCTCCGTCGGTGAAATACAATTCCGTGATCGTATTTGTAACGAGTTCAGGTTTGCCGTTTTTGTTGTCTACTCGACGAATTCCACAGTTCTGAATCTGAACCTAGATTCAGAGATTCGTAGTTCTTCCTGCTTACGAAAAAGGATTTTTCGAGATTTCGGAGTCAGAGTTTGAGATCAAAGACTTAGACGATGGCGAGCGAGGATTGCCGAGTTTATCACGAAAGGCAAAAGCTACAGTTCTGCCTCTTGCACGCACTCAATAACCTCTTTCAGGTTTTTTTTTTTCAATCTCAAACCTTTGACTCTGAAAATTTTCCAAACGTTTTCTGATTGCTTGAGATTGATAATCGTTGAATCTTGAAATTTATTATTTGCAGTGTAATTAAGATGCTGATAAACGGAATTGTACTGTTCCTTATCATTAAGAAAGAATTGTCGTCTCACTATCTGACGATTTGTTGCATTCCTTATGTATTTCGGTGTCTTCATACCATTAAATCTTCTATTAACATCATATTATAACAGGAAAATGATGCATTTACACGAGCGCACTTAAATGCAATTTCTGAAAAGCTGGTGCTCGACGAGCCAAACAGAGAACCTTGGACGCCATTATCATTTGTCTTTAAGCCTCATCACAACTCAGTAACTGGAAACTATGATATAAATGTCCTAATTTCAGCTCTGGAAGAGAAAGGGAAGAGTGTGGTGTGGCATGATCATCGGAATGGAGCTTCTTCAATCGATTTGGATGGGCCTGAGGCTACTCATAAACTTATGGGAATTGTGCTTAACGTCCCAGTCAGAAGGTTTGGTGGCATTTGGAAAAGCAGGCACTGGGTTGCTCTGAGAAAGATCAACGAGTTATGGTATAATTTGGACAGTGATCTGCATACTCCTCATACGTTTAAGGATACTGACGAGGTAAGACAATTTTTGGATAATGTGATCAATGACAATGGGGAAATTTTGCTTGTTATGAATGGCAGGAACTAAATCTCCTGCATAGGATACTCGTGTTTGTGCTTGAATCAAATGTAAAATAAAAATTAGAGCTGGATTGTGTTGGCTGTTTTTTCTGCAACTTGTTTGGCATTCTGAGATTTACTTGGCTTGAGTTAATGTTTTTGATTATTTCACATTGCTGATAAAGAGGGGAAATGATTTGAAGTGAAAAGCAATGAGAAACTGTTCATGTCTGAGTTTTGCACCTAAAAGCCAAATGAAGACGATTATCTTTAGTTGGCACCCTGAAGGGATTCTGAATTTGCTAAGCTGCTGGTAAAACTGCCATCAGATGGAATGGCGCCAGGTATTTTACAGAGCAGAATGGTTTGTTATGATTAAAAAAGACTCAATTTTACCGGTCATGGAACGTCAGGTGTTACAATCGCACTTTTCTTAGTAGTGGGCTTTTACAATTGTGCAGCACTCCAACACTAAGTAGGTGAAGTCAATTTGGGATCATGTCGCCTACGGCAGGGCATAGGCAGGGCAATGTATGCTTAAACCTCTAGCCCGTTTTGAGAAAATTGTTTTAGAAAATGGGAGCAGAGAGATTTTCGAAAGAGAGTTTGGAAGCAAGGTTGAAATAAAGAATGAGAGCAACGTTATATGACTACATACAAAAGGCAATAAAATGGCTTAAATAGCATATACTTTTCCGGGTATGGAGAATTTGACAACTAGTCACATTTCCTTATAGTACATTTTGAGGTGATTCTAGGCTGGCAGGTCTAGACACGATTTTGCCAAATGGTCATACAAAGTTTAGGTGGGAGGAGTTGATGACTAGTCGCATCCACTTATAGTACATTTCGGGGCATTTCAATTGTATCAGGCATCATGGGCAACACACAAGGCAAGATTAGGAAAGCAATAAAGTGATATAAGGCAAGATTTTGACATGTAACGAGCATGCAGTCATGAGCAACACACCTTAGACAAGCTTGCCGTGACACTTGGTTACAGAGGTTAGCTTCAACTATTATTGTGAGTTTCGTGTAAAAGTTTATATTATCTCATCATCACACATTAACCATTACCATCATTGCTACGAACACAAACGCAGTCTTTTTGTCTGATCAAACCCTTTAGTATATATTTTAACAAGAAAGCATGATGCATCGCCACCAAAGAACGCTTTCCAAAAGTTTGTTAAAATAAGAACAGCTTTACGCCCTTAGTGGATGCATTCCCTATAATTGTCCGCTCAAAATCCTTTCTTCTTAAATGGCCATTTTAGCTTTAGAAATTCCCTTTTTCCTTTATCTGAAACAAGAATCTTTAGAGCCTTTCATCATTTCCTTTTGCTCTGTCATCCCCTTATTTAATATTGACTTTGCTTCCTTTGTGATTCCAAGTCGCTTTCCACTGTTGTTCCTGTTCCAAACTTGTAAATGTTGGAGAGAATTGTTTTTTTCCAATAAACAAAATAAGAAGAAGAAAAATCTGAATTTAAAGTGATATATTTGTGTCAATCTACCTTGCTATAGCTATATTCAATAGTTTAAAAATGCCATCAATTTAGTCCACTAAACTGCAGTAGAGAGGACGACATGATTATTGCTATATTTATGGTTTTGTTTATTATTTGATGTCAAAACTGTTGATTTCTACCTGTTCTGTTCTCTCTGTTTATCTTGACATCCAGATAAAGTTCATTATATCTTTGGCCGTTGGATCAAACATTTAACGGTTGACATTTCATGATTAAATCAGTGTTAGGCATTATATTGAATGACCCTCACTTTTGTTCCTTGCTTGATAGAGATTTAATGCACACAGGACACAACAGAGCCTTCTTGGGTTTGCTTAAGAACACGCTTTGGTGGGCAGCCTGCACTTTTCAGCAGTGTGTACGTCCCTTTTCTTGATCTCTCTGTTTTTTTCTCTGTGTTCTTCAGACCTTCCTTCTAATTCTATGACGACGGCAACAATGGAGCAGAGAATTGAGAAAAGGAACATGTCGAGCAACGCAACCAGGCGAAGCACAGGGTCGTTTAGAAAGTTGAGATTTAAGTCGCTGAAAGGCCTGCAATTCTCTCCGCTGAGCTTTTTGAAGCACCTGGCCAATAAAGTGACCCGAGCTTGGCATTTGATGGCCATGAAGAGAAGACCCCACCATGAGCAACAACCTGTTCCGGCCATGCCTGTCGCCACCTCGAAGCCACTGCCGGTGTCCGCCGTCGACTCACATAGAACAGAGGCTGTGGAGGACTGCATCAAGTACATCAACTCTTCCTCGTAGCTCCTCACACCAATTCTTGGTAAGATTTTCTCCACAAAATGCTTAGTATATATACCGTCTCTTTGTGGGTTTAATTAATGCCTAATTTCATCGTTGCTGATCATGATGAAATGTTGTTTCTTTGGTCTTCTTTAGATTAAAAATTAAGCCTTTCATCTCTATATTCTTTTTTCACAAAACCCTATTTGCAAATTATCCTTACGAAGTTTTTTTCTTCCTTTTTTAATCGAAATTAGTTAATAATAATAATAATTCTTACCCAAAATTTATAAAGAAAATGTTTGCGGATGATTGTTGGAGAGTCGGTGGATCATGGGTTTATAAG CCGAATCGAATAGCGAGTTCGGAAACTCCGAGACCAGCCGATTTCTTCGAAGTCGAAATCCATCGCCGCCCTTCTACCCGAAGTTTGTGGCGGCGCATGCTCTCTCCGTCGGTGAAATACAATTCCGTGATCGTATTTGTAACGAGTTCAGGTTTGCCGTTTTTGTTGTCTACTCGACGAATTCCACAGTTCTGAATCTGAACCTAGATTCAGAGATTCGTAGTTCTTCCTGCTTACGAAAAAGGATTTTTCGAGATTTCGGAGTCAGAGTTTGAGATCAAAGACTTAGACGATGGCGAGCGAGGATTGCCGAGTTTATCACGAAAGGCAAAAGCTACAGTTCTGCCTCTTGCACGCACTCAATAACCTCTTTCAGGAAAATGATGCATTTACACGAGCGCACTTAAATGCAATTTCTGAAAAGCTGGTGCTCGACGAGCCAAACAGAGAACCTTGGACGCCATTATCATTTGTCTTTAAGCCTCATCACAACTCAGTAACTGGAAACTATGATATAAATGTCCTAATTTCAGCTCTGGAAGAGAAAGGGAAGAGTGTGGTGTGGCATGATCATCGGAATGGAGCTTCTTCAATCGATTTGGATGGGCCTGAGGCTACTCATAAACTTATGGGAATTGTGCTTAACGTCCCAGTCAGAAGGTTTGGTGGCATTTGGAAAAGCAGGCACTGGGTTGCTCTGAGAAAGATCAACGAGTTATGGTATAATTTGGACAGTGATCTGCATACTCCTCATACGTTTAAGGATACTGACGAGGTAAGACAATTTTTGGATAATGTGATCAATGACAATGGGGAAATTTTGCTTGAACTAAATCTCCTGCATAGGATACTCGTGTTTGTGCTTGAATCAAATAGAATTGAGAAAAGGAACATGTCGAGCAACGCAACCAGGCGAAGCACAGGGTCGTTTAGAAAGTTGAGATTTAAGTCGCTGAAAGGCCTGCAATTCTCTCCGCTGAGCTTTTTGAAGCACCTGGCCAATAAAGTGACCCGAGCTTGGCATTTGATGGCCATGAAGAGAAGACCCCACCATGAGCAACAACCTGTTCCGGCCATGCCTGTCGCCACCTCGAAGCCACTGCCGGTGTCCGCCGTCGACTCACATAGAACAGAGGCTGTGGAGGACTGCATCAAGTACATCAACTCTTCCTCGTAGCTCCTCACACCAATTCTTGGTAAGATTTTCTCCACAAAATGCTTAGTATATATACCGTCTCTTTGTGGGTTTAATTAATGCCTAATTTCATCGTTGCTGATCATGATGAAATGTTGTTTCTTTGGTCTTCTTTAGATTAAAAATTAAGCCTTTCATCTCTATATTCTTTTTTCACAAAACCCTATTTGCAAATTATCCTTACGAAGTTTTTTTCTTCCTTTTTTAATCGAAATTAGTTAATAATAATAATAATTCTTACCCAAAATTTATAAAGAAAATGTTTGCGGATGATTGTTGGAGAGTCGGTGGATCATGGGTTTATAAG ATGGCGAGCGAGGATTGCCGAGTTTATCACGAAAGGCAAAAGCTACAGTTCTGCCTCTTGCACGCACTCAATAACCTCTTTCAGGAAAATGATGCATTTACACGAGCGCACTTAAATGCAATTTCTGAAAAGCTGGTGCTCGACGAGCCAAACAGAGAACCTTGGACGCCATTATCATTTGTCTTTAAGCCTCATCACAACTCAGTAACTGGAAACTATGATATAAATGTCCTAATTTCAGCTCTGGAAGAGAAAGGGAAGAGTGTGGTGTGGCATGATCATCGGAATGGAGCTTCTTCAATCGATTTGGATGGGCCTGAGGCTACTCATAAACTTATGGGAATTGTGCTTAACGTCCCAGTCAGAAGGTTTGGTGGCATTTGGAAAAGCAGGCACTGGGTTGCTCTGAGAAAGATCAACGAGTTATGGTATAATTTGGACAGTGATCTGCATACTCCTCATACGTTTAAGGATACTGACGAGGTAAGACAATTTTTGGATAATGTGATCAATGACAATGGGGAAATTTTGCTTGAACTAAATCTCCTGCATAGGATACTCGTGTTTGTGCTTGAATCAAATAGAATTGAGAAAAGGAACATGTCGAGCAACGCAACCAGGCGAAGCACAGGGTCGTTTAGAAAGTTGAGATTTAAGTCGCTGAAAGGCCTGCAATTCTCTCCGCTGAGCTTTTTGAAGCACCTGGCCAATAAAGTGACCCGAGCTTGGCATTTGATGGCCATGAAGAGAAGACCCCACCATGAGCAACAACCTGTTCCGGCCATGCCTGTCGCCACCTCGAAGCCACTGCCGGTGTCCGCCGTCGACTCACATAGAACAGAGGCTGTGGAGGACTGCATCAAGTACATCAACTCTTCCTCGTAG MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSFVFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVPVRRFGGIWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLDNVINDNGEILLELNLLHRILVFVLESNRIEKRNMSSNATRRSTGSFRKLRFKSLKGLQFSPLSFLKHLANKVTRAWHLMAMKRRPHHEQQPVPAMPVATSKPLPVSAVDSHRTEAVEDCIKYINSSS Homology
BLAST of Carg03354 vs. NCBI nr
Match: KAG7010513.1 (Josephin-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 599.4 bits (1544), Expect = 1.7e-167 Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0
BLAST of Carg03354 vs. NCBI nr
Match: XP_023512266.1 (uncharacterized protein LOC111777056 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 541.2 bits (1393), Expect = 5.6e-150 Identity = 283/364 (77.75%), Postives = 289/364 (79.40%), Query Frame = 0
BLAST of Carg03354 vs. NCBI nr
Match: KAG6570667.1 (Josephin-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 380.9 bits (977), Expect = 9.6e-102 Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0
BLAST of Carg03354 vs. NCBI nr
Match: XP_022944731.1 (josephin-like protein [Cucurbita moschata] >XP_022944732.1 josephin-like protein [Cucurbita moschata] >XP_022944733.1 josephin-like protein [Cucurbita moschata] >XP_022944734.1 josephin-like protein [Cucurbita moschata] >XP_022944735.1 josephin-like protein [Cucurbita moschata]) HSP 1 Score: 377.9 bits (969), Expect = 8.1e-101 Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 0
BLAST of Carg03354 vs. NCBI nr
Match: XP_022986948.1 (josephin-like protein [Cucurbita maxima]) HSP 1 Score: 372.9 bits (956), Expect = 2.6e-99 Identity = 175/181 (96.69%), Postives = 179/181 (98.90%), Query Frame = 0
BLAST of Carg03354 vs. ExPASy Swiss-Prot
Match: O82391 (Josephin-like protein OS=Arabidopsis thaliana OX=3702 GN=At2g29640 PE=2 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 5.5e-68 Identity = 149/350 (42.57%), Postives = 209/350 (59.71%), Query Frame = 0
BLAST of Carg03354 vs. ExPASy Swiss-Prot
Match: Q5EAE5 (Josephin-1 OS=Bos taurus OX=9913 GN=JOSD1 PE=2 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.4e-23 Identity = 65/179 (36.31%), Postives = 99/179 (55.31%), Query Frame = 0
BLAST of Carg03354 vs. ExPASy Swiss-Prot
Match: Q5BJY4 (Josephin-1 OS=Rattus norvegicus OX=10116 GN=Josd1 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.9e-23 Identity = 66/179 (36.87%), Postives = 98/179 (54.75%), Query Frame = 0
BLAST of Carg03354 vs. ExPASy Swiss-Prot
Match: Q15040 (Josephin-1 OS=Homo sapiens OX=9606 GN=JOSD1 PE=1 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 4.2e-23 Identity = 65/179 (36.31%), Postives = 98/179 (54.75%), Query Frame = 0
BLAST of Carg03354 vs. ExPASy Swiss-Prot
Match: Q9DBJ6 (Josephin-1 OS=Mus musculus OX=10090 GN=Josd1 PE=1 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 4.2e-23 Identity = 65/179 (36.31%), Postives = 98/179 (54.75%), Query Frame = 0
BLAST of Carg03354 vs. ExPASy TrEMBL
Match: A0A6J1FYW5 (Ubiquitinyl hydrolase 1 OS=Cucurbita moschata OX=3662 GN=LOC111449101 PE=4 SV=1) HSP 1 Score: 377.9 bits (969), Expect = 3.9e-101 Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 0
BLAST of Carg03354 vs. ExPASy TrEMBL
Match: A0A6J1JI12 (Ubiquitinyl hydrolase 1 OS=Cucurbita maxima OX=3661 GN=LOC111484533 PE=4 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 1.3e-99 Identity = 175/181 (96.69%), Postives = 179/181 (98.90%), Query Frame = 0
BLAST of Carg03354 vs. ExPASy TrEMBL
Match: A0A6J1D2P2 (Ubiquitinyl hydrolase 1 OS=Momordica charantia OX=3673 GN=LOC111017028 PE=4 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 3.8e-88 Identity = 158/181 (87.29%), Postives = 168/181 (92.82%), Query Frame = 0
BLAST of Carg03354 vs. ExPASy TrEMBL
Match: A0A1S4E4I3 (Ubiquitinyl hydrolase 1 OS=Cucumis melo OX=3656 GN=LOC103502098 PE=4 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 4.7e-86 Identity = 154/181 (85.08%), Postives = 165/181 (91.16%), Query Frame = 0
BLAST of Carg03354 vs. ExPASy TrEMBL
Match: A0A5D3CVY1 (Ubiquitinyl hydrolase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00510 PE=4 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 4.7e-86 Identity = 154/181 (85.08%), Postives = 165/181 (91.16%), Query Frame = 0
BLAST of Carg03354 vs. TAIR 10
Match: AT2G29640.1 (JOSEPHIN-like protein ) HSP 1 Score: 259.2 bits (661), Expect = 3.9e-69 Identity = 149/350 (42.57%), Postives = 209/350 (59.71%), Query Frame = 0
BLAST of Carg03354 vs. TAIR 10
Match: AT1G07300.1 (josephin protein-related ) HSP 1 Score: 44.7 bits (104), Expect = 1.5e-04 Identity = 23/63 (36.51%), Postives = 36/63 (57.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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