Carg03354 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg03354
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUbiquitinyl hydrolase 1
LocationCarg_Chr20: 1802398 .. 1806075 (-)
RNA-Seq ExpressionCarg03354
SyntenyCarg03354
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGAATCGAATAGCGAGTTCGGAAACTCCGAGACCAGCCGATTTCTTCGAAGTCGAAATCCATCGCCGCCCTTCTACCCGAAGTTTGTGGCGGCGCATGCTCTCTCCGTCGGTGAAATACAATTCCGTGATCGTATTTGTAACGAGTTCAGGTTTGCCGTTTTTGTTGTCTACTCGACGAATTCCACAGTTCTGAATCTGAACCTAGATTCAGAGATTCGTAGTTCTTCCTGCTTACGAAAAAGGATTTTTCGAGATTTCGGAGTCAGAGTTTGAGATCAAAGACTTAGACGATGGCGAGCGAGGATTGCCGAGTTTATCACGAAAGGCAAAAGCTACAGTTCTGCCTCTTGCACGCACTCAATAACCTCTTTCAGGTTTTTTTTTTTCAATCTCAAACCTTTGACTCTGAAAATTTTCCAAACGTTTTCTGATTGCTTGAGATTGATAATCGTTGAATCTTGAAATTTATTATTTGCAGTGTAATTAAGATGCTGATAAACGGAATTGTACTGTTCCTTATCATTAAGAAAGAATTGTCGTCTCACTATCTGACGATTTGTTGCATTCCTTATGTATTTCGGTGTCTTCATACCATTAAATCTTCTATTAACATCATATTATAACAGGAAAATGATGCATTTACACGAGCGCACTTAAATGCAATTTCTGAAAAGCTGGTGCTCGACGAGCCAAACAGAGAACCTTGGACGCCATTATCATTTGTCTTTAAGCCTCATCACAACTCAGTAACTGGAAACTATGATATAAATGTCCTAATTTCAGCTCTGGAAGAGAAAGGGAAGAGTGTGGTGTGGCATGATCATCGGAATGGAGCTTCTTCAATCGATTTGGATGGGCCTGAGGCTACTCATAAACTTATGGGAATTGTGCTTAACGTCCCAGTCAGAAGGTTTGGTGGCATTTGGAAAAGCAGGCACTGGGTTGCTCTGAGAAAGATCAACGAGTTATGGTATAATTTGGACAGTGATCTGCATACTCCTCATACGTTTAAGGATACTGACGAGGTAAGACAATTTTTGGATAATGTGATCAATGACAATGGGGAAATTTTGCTTGTTATGAATGGCAGGAACTAAATCTCCTGCATAGGATACTCGTGTTTGTGCTTGAATCAAATGTAAAATAAAAATTAGAGCTGGATTGTGTTGGCTGTTTTTTCTGCAACTTGTTTGGCATTCTGAGATTTACTTGGCTTGAGTTAATGTTTTTGATTATTTCACATTGCTGATAAAGAGGGGAAATGATTTGAAGTGAAAAGCAATGAGAAACTGTTCATGTCTGAGTTTTGCACCTAAAAGCCAAATGAAGACGATTATCTTTAGTTGGCACCCTGAAGGGATTCTGAATTTGCTAAGCTGCTGGTAAAACTGCCATCAGATGGAATGGCGCCAGGTATTTTACAGAGCAGAATGGTTTGTTATGATTAAAAAAGACTCAATTTTACCGGTCATGGAACGTCAGGTGTTACAATCGCACTTTTCTTAGTAGTGGGCTTTTACAATTGTGCAGCACTCCAACACTAAGTAGGTGAAGTCAATTTGGGATCATGTCGCCTACGGCAGGGCATAGGCAGGGCAATGTATGCTTAAACCTCTAGCCCGTTTTGAGAAAATTGTTTTAGAAAATGGGAGCAGAGAGATTTTCGAAAGAGAGTTTGGAAGCAAGGTTGAAATAAAGAATGAGAGCAACGTTATATGACTACATACAAAAGGCAATAAAATGGCTTAAATAGCATATACTTTTCCGGGTATGGAGAATTTGACAACTAGTCACATTTCCTTATAGTACATTTTGAGGTGATTCTAGGCTGGCAGGTCTAGACACGATTTTGCCAAATGGTCATACAAAGTTTAGGTGGGAGGAGTTGATGACTAGTCGCATCCACTTATAGTACATTTCGGGGCATTTCAATTGTATCAGGCATCATGGGCAACACACAAGGCAAGATTAGGAAAGCAATAAAGTGATATAAGGCAAGATTTTGACATGTAACGAGCATGCAGTCATGAGCAACACACCTTAGACAAGCTTGCCGTGACACTTGGTTACAGAGGTTAGCTTCAACTATTATTGTGAGTTTCGTGTAAAAGTTTATATTATCTCATCATCACACATTAACCATTACCATCATTGCTACGAACACAAACGCAGTCTTTTTGTCTGATCAAACCCTTTAGTATATATTTTAACAAGAAAGCATGATGCATCGCCACCAAAGAACGCTTTCCAAAAGTTTGTTAAAATAAGAACAGCTTTACGCCCTTAGTGGATGCATTCCCTATAATTGTCCGCTCAAAATCCTTTCTTCTTAAATGGCCATTTTAGCTTTAGAAATTCCCTTTTTCCTTTATCTGAAACAAGAATCTTTAGAGCCTTTCATCATTTCCTTTTGCTCTGTCATCCCCTTATTTAATATTGACTTTGCTTCCTTTGTGATTCCAAGTCGCTTTCCACTGTTGTTCCTGTTCCAAACTTGTAAATGTTGGAGAGAATTGTTTTTTTCCAATAAACAAAATAAGAAGAAGAAAAATCTGAATTTAAAGTGATATATTTGTGTCAATCTACCTTGCTATAGCTATATTCAATAGTTTAAAAATGCCATCAATTTAGTCCACTAAACTGCAGTAGAGAGGACGACATGATTATTGCTATATTTATGGTTTTGTTTATTATTTGATGTCAAAACTGTTGATTTCTACCTGTTCTGTTCTCTCTGTTTATCTTGACATCCAGATAAAGTTCATTATATCTTTGGCCGTTGGATCAAACATTTAACGGTTGACATTTCATGATTAAATCAGTGTTAGGCATTATATTGAATGACCCTCACTTTTGTTCCTTGCTTGATAGAGATTTAATGCACACAGGACACAACAGAGCCTTCTTGGGTTTGCTTAAGAACACGCTTTGGTGGGCAGCCTGCACTTTTCAGCAGTGTGTACGTCCCTTTTCTTGATCTCTCTGTTTTTTTCTCTGTGTTCTTCAGACCTTCCTTCTAATTCTATGACGACGGCAACAATGGAGCAGAGAATTGAGAAAAGGAACATGTCGAGCAACGCAACCAGGCGAAGCACAGGGTCGTTTAGAAAGTTGAGATTTAAGTCGCTGAAAGGCCTGCAATTCTCTCCGCTGAGCTTTTTGAAGCACCTGGCCAATAAAGTGACCCGAGCTTGGCATTTGATGGCCATGAAGAGAAGACCCCACCATGAGCAACAACCTGTTCCGGCCATGCCTGTCGCCACCTCGAAGCCACTGCCGGTGTCCGCCGTCGACTCACATAGAACAGAGGCTGTGGAGGACTGCATCAAGTACATCAACTCTTCCTCGTAGCTCCTCACACCAATTCTTGGTAAGATTTTCTCCACAAAATGCTTAGTATATATACCGTCTCTTTGTGGGTTTAATTAATGCCTAATTTCATCGTTGCTGATCATGATGAAATGTTGTTTCTTTGGTCTTCTTTAGATTAAAAATTAAGCCTTTCATCTCTATATTCTTTTTTCACAAAACCCTATTTGCAAATTATCCTTACGAAGTTTTTTTCTTCCTTTTTTAATCGAAATTAGTTAATAATAATAATAATTCTTACCCAAAATTTATAAAGAAAATGTTTGCGGATGATTGTTGGAGAGTCGGTGGATCATGGGTTTATAAG

mRNA sequence

CCGAATCGAATAGCGAGTTCGGAAACTCCGAGACCAGCCGATTTCTTCGAAGTCGAAATCCATCGCCGCCCTTCTACCCGAAGTTTGTGGCGGCGCATGCTCTCTCCGTCGGTGAAATACAATTCCGTGATCGTATTTGTAACGAGTTCAGGTTTGCCGTTTTTGTTGTCTACTCGACGAATTCCACAGTTCTGAATCTGAACCTAGATTCAGAGATTCGTAGTTCTTCCTGCTTACGAAAAAGGATTTTTCGAGATTTCGGAGTCAGAGTTTGAGATCAAAGACTTAGACGATGGCGAGCGAGGATTGCCGAGTTTATCACGAAAGGCAAAAGCTACAGTTCTGCCTCTTGCACGCACTCAATAACCTCTTTCAGGAAAATGATGCATTTACACGAGCGCACTTAAATGCAATTTCTGAAAAGCTGGTGCTCGACGAGCCAAACAGAGAACCTTGGACGCCATTATCATTTGTCTTTAAGCCTCATCACAACTCAGTAACTGGAAACTATGATATAAATGTCCTAATTTCAGCTCTGGAAGAGAAAGGGAAGAGTGTGGTGTGGCATGATCATCGGAATGGAGCTTCTTCAATCGATTTGGATGGGCCTGAGGCTACTCATAAACTTATGGGAATTGTGCTTAACGTCCCAGTCAGAAGGTTTGGTGGCATTTGGAAAAGCAGGCACTGGGTTGCTCTGAGAAAGATCAACGAGTTATGGTATAATTTGGACAGTGATCTGCATACTCCTCATACGTTTAAGGATACTGACGAGGTAAGACAATTTTTGGATAATGTGATCAATGACAATGGGGAAATTTTGCTTGAACTAAATCTCCTGCATAGGATACTCGTGTTTGTGCTTGAATCAAATAGAATTGAGAAAAGGAACATGTCGAGCAACGCAACCAGGCGAAGCACAGGGTCGTTTAGAAAGTTGAGATTTAAGTCGCTGAAAGGCCTGCAATTCTCTCCGCTGAGCTTTTTGAAGCACCTGGCCAATAAAGTGACCCGAGCTTGGCATTTGATGGCCATGAAGAGAAGACCCCACCATGAGCAACAACCTGTTCCGGCCATGCCTGTCGCCACCTCGAAGCCACTGCCGGTGTCCGCCGTCGACTCACATAGAACAGAGGCTGTGGAGGACTGCATCAAGTACATCAACTCTTCCTCGTAGCTCCTCACACCAATTCTTGGTAAGATTTTCTCCACAAAATGCTTAGTATATATACCGTCTCTTTGTGGGTTTAATTAATGCCTAATTTCATCGTTGCTGATCATGATGAAATGTTGTTTCTTTGGTCTTCTTTAGATTAAAAATTAAGCCTTTCATCTCTATATTCTTTTTTCACAAAACCCTATTTGCAAATTATCCTTACGAAGTTTTTTTCTTCCTTTTTTAATCGAAATTAGTTAATAATAATAATAATTCTTACCCAAAATTTATAAAGAAAATGTTTGCGGATGATTGTTGGAGAGTCGGTGGATCATGGGTTTATAAG

Coding sequence (CDS)

ATGGCGAGCGAGGATTGCCGAGTTTATCACGAAAGGCAAAAGCTACAGTTCTGCCTCTTGCACGCACTCAATAACCTCTTTCAGGAAAATGATGCATTTACACGAGCGCACTTAAATGCAATTTCTGAAAAGCTGGTGCTCGACGAGCCAAACAGAGAACCTTGGACGCCATTATCATTTGTCTTTAAGCCTCATCACAACTCAGTAACTGGAAACTATGATATAAATGTCCTAATTTCAGCTCTGGAAGAGAAAGGGAAGAGTGTGGTGTGGCATGATCATCGGAATGGAGCTTCTTCAATCGATTTGGATGGGCCTGAGGCTACTCATAAACTTATGGGAATTGTGCTTAACGTCCCAGTCAGAAGGTTTGGTGGCATTTGGAAAAGCAGGCACTGGGTTGCTCTGAGAAAGATCAACGAGTTATGGTATAATTTGGACAGTGATCTGCATACTCCTCATACGTTTAAGGATACTGACGAGGTAAGACAATTTTTGGATAATGTGATCAATGACAATGGGGAAATTTTGCTTGAACTAAATCTCCTGCATAGGATACTCGTGTTTGTGCTTGAATCAAATAGAATTGAGAAAAGGAACATGTCGAGCAACGCAACCAGGCGAAGCACAGGGTCGTTTAGAAAGTTGAGATTTAAGTCGCTGAAAGGCCTGCAATTCTCTCCGCTGAGCTTTTTGAAGCACCTGGCCAATAAAGTGACCCGAGCTTGGCATTTGATGGCCATGAAGAGAAGACCCCACCATGAGCAACAACCTGTTCCGGCCATGCCTGTCGCCACCTCGAAGCCACTGCCGGTGTCCGCCGTCGACTCACATAGAACAGAGGCTGTGGAGGACTGCATCAAGTACATCAACTCTTCCTCGTAG

Protein sequence

MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSFVFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVPVRRFGGIWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLDNVINDNGEILLELNLLHRILVFVLESNRIEKRNMSSNATRRSTGSFRKLRFKSLKGLQFSPLSFLKHLANKVTRAWHLMAMKRRPHHEQQPVPAMPVATSKPLPVSAVDSHRTEAVEDCIKYINSSS
Homology
BLAST of Carg03354 vs. NCBI nr
Match: KAG7010513.1 (Josephin-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 599.4 bits (1544), Expect = 1.7e-167
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0

Query: 1   MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSF 60
           MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSF
Sbjct: 1   MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSF 60

Query: 61  VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP 120
           VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP
Sbjct: 61  VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP 120

Query: 121 VRRFGGIWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLDNVINDNGEILLEL 180
           VRRFGGIWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLDNVINDNGEILLEL
Sbjct: 121 VRRFGGIWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLDNVINDNGEILLEL 180

Query: 181 NLLHRILVFVLESNRIEKRNMSSNATRRSTGSFRKLRFKSLKGLQFSPLSFLKHLANKVT 240
           NLLHRILVFVLESNRIEKRNMSSNATRRSTGSFRKLRFKSLKGLQFSPLSFLKHLANKVT
Sbjct: 181 NLLHRILVFVLESNRIEKRNMSSNATRRSTGSFRKLRFKSLKGLQFSPLSFLKHLANKVT 240

Query: 241 RAWHLMAMKRRPHHEQQPVPAMPVATSKPLPVSAVDSHRTEAVEDCIKYINSSS 295
           RAWHLMAMKRRPHHEQQPVPAMPVATSKPLPVSAVDSHRTEAVEDCIKYINSSS
Sbjct: 241 RAWHLMAMKRRPHHEQQPVPAMPVATSKPLPVSAVDSHRTEAVEDCIKYINSSS 294

BLAST of Carg03354 vs. NCBI nr
Match: XP_023512266.1 (uncharacterized protein LOC111777056 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 541.2 bits (1393), Expect = 5.6e-150
Identity = 283/364 (77.75%), Postives = 289/364 (79.40%), Query Frame = 0

Query: 1   MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSF 60
           MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSF
Sbjct: 2   MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSF 61

Query: 61  VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP 120
           VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP
Sbjct: 62  VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP 121

Query: 121 VRRFGGIWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLDNVINDNGEILLEL 180
           VRRFGGIWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLDNVINDNGEILL +
Sbjct: 122 VRRFGGIWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLDNVINDNGEILLVM 181

Query: 181 N-------------------------------------------------------LLH- 240
           N                                                       L+H 
Sbjct: 182 NDRNLDPEFAKLLVKLPSDGMAPESDIRQDFDMQRACGHGQHTLDKHRRDTWLQRDLMHT 241

Query: 241 ---RILVFVLESN-----------RIEKRNMSSNATRRSTGSFRKLRFKSLKGLQFSPLS 295
              R  + +L++            RIEKRNMSSNATRRSTGSFRKLRFKSLKGLQFSPLS
Sbjct: 242 GHNRAFLGLLKNTLWLAACTFQQCRIEKRNMSSNATRRSTGSFRKLRFKSLKGLQFSPLS 301

BLAST of Carg03354 vs. NCBI nr
Match: KAG6570667.1 (Josephin-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 380.9 bits (977), Expect = 9.6e-102
Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0

Query: 1   MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSF 60
           MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSF
Sbjct: 1   MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSF 60

Query: 61  VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP 120
           VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP
Sbjct: 61  VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP 120

Query: 121 VRRFGGIWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLDNVINDNGEILLEL 180
           VRRFGGIWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLDNVINDNGEILL +
Sbjct: 121 VRRFGGIWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLDNVINDNGEILLVM 180

Query: 181 N 182
           N
Sbjct: 181 N 181

BLAST of Carg03354 vs. NCBI nr
Match: XP_022944731.1 (josephin-like protein [Cucurbita moschata] >XP_022944732.1 josephin-like protein [Cucurbita moschata] >XP_022944733.1 josephin-like protein [Cucurbita moschata] >XP_022944734.1 josephin-like protein [Cucurbita moschata] >XP_022944735.1 josephin-like protein [Cucurbita moschata])

HSP 1 Score: 377.9 bits (969), Expect = 8.1e-101
Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 0

Query: 1   MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSF 60
           MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSF
Sbjct: 1   MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSF 60

Query: 61  VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP 120
           VFKPHHNSVTGNYDINVLISA+EEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP
Sbjct: 61  VFKPHHNSVTGNYDINVLISAMEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP 120

Query: 121 VRRFGGIWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLDNVINDNGEILLEL 180
           VRRFGGIWKSRHWVALRKINE WYNLDSDLHTPHTFKDTDEVRQFLDNVINDNGEILL +
Sbjct: 121 VRRFGGIWKSRHWVALRKINESWYNLDSDLHTPHTFKDTDEVRQFLDNVINDNGEILLVM 180

Query: 181 N 182
           N
Sbjct: 181 N 181

BLAST of Carg03354 vs. NCBI nr
Match: XP_022986948.1 (josephin-like protein [Cucurbita maxima])

HSP 1 Score: 372.9 bits (956), Expect = 2.6e-99
Identity = 175/181 (96.69%), Postives = 179/181 (98.90%), Query Frame = 0

Query: 1   MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSF 60
           MASEDCRVYHERQKLQFCLLHALNNLFQEN+AFTRAHLNAI+EKLVLDEPN+EPWTPLSF
Sbjct: 1   MASEDCRVYHERQKLQFCLLHALNNLFQENNAFTRAHLNAIAEKLVLDEPNKEPWTPLSF 60

Query: 61  VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP 120
           VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP
Sbjct: 61  VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP 120

Query: 121 VRRFGGIWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLDNVINDNGEILLEL 180
           VRRFGGIWKSRHWVALRKINELWYNLDSDL TPHTFKDTDEVRQFLDNVINDNGEILL +
Sbjct: 121 VRRFGGIWKSRHWVALRKINELWYNLDSDLPTPHTFKDTDEVRQFLDNVINDNGEILLVM 180

Query: 181 N 182
           N
Sbjct: 181 N 181

BLAST of Carg03354 vs. ExPASy Swiss-Prot
Match: O82391 (Josephin-like protein OS=Arabidopsis thaliana OX=3702 GN=At2g29640 PE=2 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 5.5e-68
Identity = 149/350 (42.57%), Postives = 209/350 (59.71%), Query Frame = 0

Query: 1   MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSF 60
           MA  + ++YHERQ+LQFCLLH LNNLFQ+ DAFT+  LN+I+EKL  ++PN+E WTPLSF
Sbjct: 1   MADSESKIYHERQRLQFCLLHCLNNLFQDKDAFTKESLNSIAEKLETNDPNKETWTPLSF 60

Query: 61  VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP 120
           V KPHHN++TGNYD+NV+I+ALE KGKSVVWHD R GASSIDLD  +    LMGIVLNVP
Sbjct: 61  VLKPHHNTITGNYDVNVMITALEGKGKSVVWHDKRIGASSIDLDDADT---LMGIVLNVP 120

Query: 121 VRRFGGIWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLDNVIN--------- 180
           V+R+GG+W+SRHWV +RKIN +WYNLDSDL  P  F+D DEVR FLD  ++         
Sbjct: 121 VKRYGGLWRSRHWVVVRKINGVWYNLDSDLVVPQLFRDDDEVRGFLDQNLSLDVIGLIWN 180

Query: 181 -----------DNGEILL----ELN-LLHRILVFVLESNRIEKRNMSSNATRRSTGSFR- 240
                       N  +++    +LN +   +  + L+ +   + +   +A  ++TG+ R 
Sbjct: 181 LPYNANQLPLASNYRVVITHWSDLNGMFSHVTNYPLDFDVYPQVSSKVSAIYKATGTKRF 240

Query: 241 --------KLRFKSLKG-------------------LQFSPLSFLKHLANKVTRAWHLMA 295
                     +  S+KG                    + +    +K L+ K      L+ 
Sbjct: 241 NANTRPVTPGKQSSVKGPYYKNPGCTTSCGLRLPRKTECTAARLIKDLSCKFVMGLRLVV 300

BLAST of Carg03354 vs. ExPASy Swiss-Prot
Match: Q5EAE5 (Josephin-1 OS=Bos taurus OX=9913 GN=JOSD1 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.4e-23
Identity = 65/179 (36.31%), Postives = 99/179 (55.31%), Query Frame = 0

Query: 7   RVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSFVFKPHH 66
           ++YHE+Q+ + C LHALNN+FQ+++AFTR  L  I ++L    PN         +  PH 
Sbjct: 25  QIYHEKQRRELCALHALNNVFQDSNAFTRETLQEIFQRL---SPNT--------MVTPHK 84

Query: 67  NSV--TGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVPVRRF 126
            S+   GNYD+NV+++AL+ KG   VW D R    +I      A   +MG ++N+P    
Sbjct: 85  KSMLGNGNYDVNVIMAALQTKGYEAVWWDKRRDVGAI------ALTNVMGFIMNLPSSLC 144

Query: 127 GG----IWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLDNVI-NDNGEILL 179
            G      K +HW+ +R++   +YNLDS L  P       E+R+FL + +   N E+LL
Sbjct: 145 WGPLKLPLKRQHWICVREVGGAYYNLDSKLKMPEWIGGKSELRKFLKHHLRGKNCELLL 186

BLAST of Carg03354 vs. ExPASy Swiss-Prot
Match: Q5BJY4 (Josephin-1 OS=Rattus norvegicus OX=10116 GN=Josd1 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.9e-23
Identity = 66/179 (36.87%), Postives = 98/179 (54.75%), Query Frame = 0

Query: 7   RVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSFVFKPHH 66
           ++YHE+Q+ + C LHALNN+FQ+++AFTR  L  I ++L    PN         V  PH 
Sbjct: 25  QIYHEKQRRELCALHALNNVFQDSNAFTRETLQEIFQRL---SPNT--------VVTPHK 84

Query: 67  NSV--TGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVPVRRF 126
            S+   GNYD+NV+++AL+ KG   VW D R     I      A   +MG ++N+P    
Sbjct: 85  KSMLGNGNYDVNVIMAALQTKGYEAVWWDKRRDVGVI------ALANVMGFIMNLPSSLC 144

Query: 127 GG----IWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLD-NVINDNGEILL 179
            G      K +HW+ +R++   +YNLDS L  P       E+R+FL  ++   N E+LL
Sbjct: 145 WGPLKLPLKRQHWICVREVGGAYYNLDSKLKMPEWIGGESELRKFLKYHLRGKNCELLL 186

BLAST of Carg03354 vs. ExPASy Swiss-Prot
Match: Q15040 (Josephin-1 OS=Homo sapiens OX=9606 GN=JOSD1 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.2e-23
Identity = 65/179 (36.31%), Postives = 98/179 (54.75%), Query Frame = 0

Query: 7   RVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSFVFKPHH 66
           ++YHE+Q+ + C LHALNN+FQ+++AFTR  L  I ++L    PN         +  PH 
Sbjct: 25  QIYHEKQRRELCALHALNNVFQDSNAFTRDTLQEIFQRL---SPNT--------MVTPHK 84

Query: 67  NSV--TGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVPVRRF 126
            S+   GNYD+NV+++AL+ KG   VW D R     I      A   +MG ++N+P    
Sbjct: 85  KSMLGNGNYDVNVIMAALQTKGYEAVWWDKRRDVGVI------ALTNVMGFIMNLPSSLC 144

Query: 127 GG----IWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLDNVI-NDNGEILL 179
            G      K +HW+ +R++   +YNLDS L  P       E+R+FL + +   N E+LL
Sbjct: 145 WGPLKLPLKRQHWICVREVGGAYYNLDSKLKMPEWIGGESELRKFLKHHLRGKNCELLL 186

BLAST of Carg03354 vs. ExPASy Swiss-Prot
Match: Q9DBJ6 (Josephin-1 OS=Mus musculus OX=10090 GN=Josd1 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.2e-23
Identity = 65/179 (36.31%), Postives = 98/179 (54.75%), Query Frame = 0

Query: 7   RVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSFVFKPHH 66
           ++YHE+Q+ + C LHALNN+FQ+++AFTR  L  I ++L    PN         +  PH 
Sbjct: 25  QIYHEKQRRELCALHALNNVFQDSNAFTRETLQEIFQRL---SPNT--------MVTPHK 84

Query: 67  NSV--TGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVPVRRF 126
            S+   GNYD+NV+++AL+ KG   VW D R     I      A   +MG ++N+P    
Sbjct: 85  KSMLGNGNYDVNVIMAALQTKGYEAVWWDKRRDVGVI------ALTNVMGFIMNLPSSLC 144

Query: 127 GG----IWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLD-NVINDNGEILL 179
            G      K +HW+ +R++   +YNLDS L  P       E+R+FL  ++   N E+LL
Sbjct: 145 WGPLKLPLKRQHWICVREVGGAYYNLDSKLKMPEWIGGESELRKFLKYHLRGKNCELLL 186

BLAST of Carg03354 vs. ExPASy TrEMBL
Match: A0A6J1FYW5 (Ubiquitinyl hydrolase 1 OS=Cucurbita moschata OX=3662 GN=LOC111449101 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 3.9e-101
Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 0

Query: 1   MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSF 60
           MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSF
Sbjct: 1   MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSF 60

Query: 61  VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP 120
           VFKPHHNSVTGNYDINVLISA+EEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP
Sbjct: 61  VFKPHHNSVTGNYDINVLISAMEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP 120

Query: 121 VRRFGGIWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLDNVINDNGEILLEL 180
           VRRFGGIWKSRHWVALRKINE WYNLDSDLHTPHTFKDTDEVRQFLDNVINDNGEILL +
Sbjct: 121 VRRFGGIWKSRHWVALRKINESWYNLDSDLHTPHTFKDTDEVRQFLDNVINDNGEILLVM 180

Query: 181 N 182
           N
Sbjct: 181 N 181

BLAST of Carg03354 vs. ExPASy TrEMBL
Match: A0A6J1JI12 (Ubiquitinyl hydrolase 1 OS=Cucurbita maxima OX=3661 GN=LOC111484533 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 1.3e-99
Identity = 175/181 (96.69%), Postives = 179/181 (98.90%), Query Frame = 0

Query: 1   MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSF 60
           MASEDCRVYHERQKLQFCLLHALNNLFQEN+AFTRAHLNAI+EKLVLDEPN+EPWTPLSF
Sbjct: 1   MASEDCRVYHERQKLQFCLLHALNNLFQENNAFTRAHLNAIAEKLVLDEPNKEPWTPLSF 60

Query: 61  VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP 120
           VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP
Sbjct: 61  VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP 120

Query: 121 VRRFGGIWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLDNVINDNGEILLEL 180
           VRRFGGIWKSRHWVALRKINELWYNLDSDL TPHTFKDTDEVRQFLDNVINDNGEILL +
Sbjct: 121 VRRFGGIWKSRHWVALRKINELWYNLDSDLPTPHTFKDTDEVRQFLDNVINDNGEILLVM 180

Query: 181 N 182
           N
Sbjct: 181 N 181

BLAST of Carg03354 vs. ExPASy TrEMBL
Match: A0A6J1D2P2 (Ubiquitinyl hydrolase 1 OS=Momordica charantia OX=3673 GN=LOC111017028 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 3.8e-88
Identity = 158/181 (87.29%), Postives = 168/181 (92.82%), Query Frame = 0

Query: 1   MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSF 60
           MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRA+LNAI+E LVL+EPN+EPWTPLSF
Sbjct: 1   MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRANLNAIAENLVLNEPNKEPWTPLSF 60

Query: 61  VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP 120
           VFKPHHN+VTGNYDINVLISALEEKGKSVVWHD RNGASSIDLDGPE THKLMGIVLNV 
Sbjct: 61  VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDRRNGASSIDLDGPEDTHKLMGIVLNVS 120

Query: 121 VRRFGGIWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLDNVINDNGEILLEL 180
           VRRFGGIWKSRHW+ALRKIN LWYNLDSDL +P  FKDTDEVR+FLD  I  +GEILL +
Sbjct: 121 VRRFGGIWKSRHWIALRKINGLWYNLDSDLPSPRPFKDTDEVRKFLDYEIGHDGEILLVM 180

Query: 181 N 182
           N
Sbjct: 181 N 181

BLAST of Carg03354 vs. ExPASy TrEMBL
Match: A0A1S4E4I3 (Ubiquitinyl hydrolase 1 OS=Cucumis melo OX=3656 GN=LOC103502098 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 4.7e-86
Identity = 154/181 (85.08%), Postives = 165/181 (91.16%), Query Frame = 0

Query: 1   MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSF 60
           M  EDC VYHERQKLQ CLLHALNNLFQE DAFTRA+LNAI+EKLV DEPN+E WTPLS 
Sbjct: 2   MVREDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDEPNQETWTPLSI 61

Query: 61  VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP 120
           VFKPHHN+VTGNYDINVLISALEEKGKSVVWHDHRNGAS+IDLDGP+ T KLMGIVLNV 
Sbjct: 62  VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGASTIDLDGPDDTRKLMGIVLNVS 121

Query: 121 VRRFGGIWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLDNVINDNGEILLEL 180
           VRRFGGIWKSRHWVALRKI+ LWYNLDSDL  PH FKDT+EVR+FLD+VINDNGEILL +
Sbjct: 122 VRRFGGIWKSRHWVALRKIDGLWYNLDSDLPAPHPFKDTEEVREFLDHVINDNGEILLVM 181

Query: 181 N 182
           N
Sbjct: 182 N 182

BLAST of Carg03354 vs. ExPASy TrEMBL
Match: A0A5D3CVY1 (Ubiquitinyl hydrolase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00510 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 4.7e-86
Identity = 154/181 (85.08%), Postives = 165/181 (91.16%), Query Frame = 0

Query: 1   MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSF 60
           M  EDC VYHERQKLQ CLLHALNNLFQE DAFTRA+LNAI+EKLV DEPN+E WTPLS 
Sbjct: 2   MVREDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDEPNQETWTPLSI 61

Query: 61  VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP 120
           VFKPHHN+VTGNYDINVLISALEEKGKSVVWHDHRNGAS+IDLDGP+ T KLMGIVLNV 
Sbjct: 62  VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGASTIDLDGPDDTRKLMGIVLNVS 121

Query: 121 VRRFGGIWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLDNVINDNGEILLEL 180
           VRRFGGIWKSRHWVALRKI+ LWYNLDSDL  PH FKDT+EVR+FLD+VINDNGEILL +
Sbjct: 122 VRRFGGIWKSRHWVALRKIDGLWYNLDSDLPAPHPFKDTEEVREFLDHVINDNGEILLVM 181

Query: 181 N 182
           N
Sbjct: 182 N 182

BLAST of Carg03354 vs. TAIR 10
Match: AT2G29640.1 (JOSEPHIN-like protein )

HSP 1 Score: 259.2 bits (661), Expect = 3.9e-69
Identity = 149/350 (42.57%), Postives = 209/350 (59.71%), Query Frame = 0

Query: 1   MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSF 60
           MA  + ++YHERQ+LQFCLLH LNNLFQ+ DAFT+  LN+I+EKL  ++PN+E WTPLSF
Sbjct: 1   MADSESKIYHERQRLQFCLLHCLNNLFQDKDAFTKESLNSIAEKLETNDPNKETWTPLSF 60

Query: 61  VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP 120
           V KPHHN++TGNYD+NV+I+ALE KGKSVVWHD R GASSIDLD  +    LMGIVLNVP
Sbjct: 61  VLKPHHNTITGNYDVNVMITALEGKGKSVVWHDKRIGASSIDLDDADT---LMGIVLNVP 120

Query: 121 VRRFGGIWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLDNVIN--------- 180
           V+R+GG+W+SRHWV +RKIN +WYNLDSDL  P  F+D DEVR FLD  ++         
Sbjct: 121 VKRYGGLWRSRHWVVVRKINGVWYNLDSDLVVPQLFRDDDEVRGFLDQNLSLDVIGLIWN 180

Query: 181 -----------DNGEILL----ELN-LLHRILVFVLESNRIEKRNMSSNATRRSTGSFR- 240
                       N  +++    +LN +   +  + L+ +   + +   +A  ++TG+ R 
Sbjct: 181 LPYNANQLPLASNYRVVITHWSDLNGMFSHVTNYPLDFDVYPQVSSKVSAIYKATGTKRF 240

Query: 241 --------KLRFKSLKG-------------------LQFSPLSFLKHLANKVTRAWHLMA 295
                     +  S+KG                    + +    +K L+ K      L+ 
Sbjct: 241 NANTRPVTPGKQSSVKGPYYKNPGCTTSCGLRLPRKTECTAARLIKDLSCKFVMGLRLVV 300

BLAST of Carg03354 vs. TAIR 10
Match: AT1G07300.1 (josephin protein-related )

HSP 1 Score: 44.7 bits (104), Expect = 1.5e-04
Identity = 23/63 (36.51%), Postives = 36/63 (57.14%), Query Frame = 0

Query: 232 LKHLANKVTRAWHLMAMKRRPHHEQQPVPAMPVATSKPLPVSAVDSHRTEAVEDCIKYIN 291
           +KHL  K  +   L+ M+++       V +    +  P+     DSHR+EA+EDCI++IN
Sbjct: 57  IKHLGCKFAKGLRLVVMRKKKRSPPSKVSSFSGRSQPPIIPINNDSHRSEAIEDCIQFIN 116

Query: 292 SSS 295
           SSS
Sbjct: 117 SSS 119

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7010513.11.7e-167100.00Josephin-like protein [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023512266.15.6e-15077.75uncharacterized protein LOC111777056 [Cucurbita pepo subsp. pepo][more]
KAG6570667.19.6e-10298.90Josephin-like protein, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022944731.18.1e-10197.79josephin-like protein [Cucurbita moschata] >XP_022944732.1 josephin-like protein... [more]
XP_022986948.12.6e-9996.69josephin-like protein [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
O823915.5e-6842.57Josephin-like protein OS=Arabidopsis thaliana OX=3702 GN=At2g29640 PE=2 SV=1[more]
Q5EAE51.4e-2336.31Josephin-1 OS=Bos taurus OX=9913 GN=JOSD1 PE=2 SV=1[more]
Q5BJY41.9e-2336.87Josephin-1 OS=Rattus norvegicus OX=10116 GN=Josd1 PE=2 SV=1[more]
Q150404.2e-2336.31Josephin-1 OS=Homo sapiens OX=9606 GN=JOSD1 PE=1 SV=1[more]
Q9DBJ64.2e-2336.31Josephin-1 OS=Mus musculus OX=10090 GN=Josd1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1FYW53.9e-10197.79Ubiquitinyl hydrolase 1 OS=Cucurbita moschata OX=3662 GN=LOC111449101 PE=4 SV=1[more]
A0A6J1JI121.3e-9996.69Ubiquitinyl hydrolase 1 OS=Cucurbita maxima OX=3661 GN=LOC111484533 PE=4 SV=1[more]
A0A6J1D2P23.8e-8887.29Ubiquitinyl hydrolase 1 OS=Momordica charantia OX=3673 GN=LOC111017028 PE=4 SV=1[more]
A0A1S4E4I34.7e-8685.08Ubiquitinyl hydrolase 1 OS=Cucumis melo OX=3656 GN=LOC103502098 PE=4 SV=1[more]
A0A5D3CVY14.7e-8685.08Ubiquitinyl hydrolase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
AT2G29640.13.9e-6942.57JOSEPHIN-like protein [more]
AT1G07300.11.5e-0436.51josephin protein-related [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006155Josephin domainSMARTSM01246Josephin_2coord: 12..182
e-value: 7.5E-58
score: 208.2
IPR006155Josephin domainPFAMPF02099Josephincoord: 13..177
e-value: 3.3E-35
score: 121.5
IPR006155Josephin domainPROSITEPS50957JOSEPHINcoord: 5..198
score: 45.361416
NoneNo IPR availableGENE3D3.90.70.40coord: 17..181
e-value: 2.0E-23
score: 84.5
NoneNo IPR availablePANTHERPTHR13291:SF0JOSEPHIN-LIKE PROTEINcoord: 1..180
IPR040053Josephin-1/2PANTHERPTHR13291JOSEPHIN 1, 2coord: 1..180

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg03354-RACarg03354-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016579 protein deubiquitination
molecular_function GO:0004843 thiol-dependent deubiquitinase