Carg03348 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03348
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	acyl-coenzyme A thioesterase 13-like
Location	Carg_Chr20: 1825588 .. 1826833 (+)
RNA-Seq Expression	Carg03348
Synteny	Carg03348

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCGACGTCCAGACAAGAAATGCTTGAAAGGATCCACCGTCCATTTGAGTGGAGCACCGAACTCTACATACTCCTGCACCGCACTGGATTATTCAATAAAAATATGGGTCTTTCGATAGCCAAGATTGATCAGTGAGGGTTCGAGAGAGAAGATGAAGAAAATTGAAAGCGAAATCATGGAGAAGACGAAGCAGCTTCTGGAATTGAGTCAGGAGGAAGCGAACGCCGTGGAGAAGCTCGACGTCCGGCCGAGGAAAGCCGGAGAGTCATGCTTCTATACCTTCTTCGCTCTCAGAGGCATCCGAGTCGACCGTTCCGAACCAGGGCTCGTCGTTTGTACCCTAAAGGTCCCTCCGCGCCTCACAGTATGATTCTGAAACTCTCTGTTACTTTATTTTCCGTCTATTTCACTCTTTTTGCCCTAATTTTGGACCTAGTTCTGATGAAGGCGTTCCGAAAATCGATTGACGATCGGTTCTTCTGCGAGCGTATTAGTCGATGAGGAAAGAGGAGAGGCTAATTTTTCGAATTAAGCATTCAAATCACTCGATCGCCGATTTCATCCTATTGATTGAATTTGCAACGTATTGTTGAATTGAGTACGCAATCGGAGGGGGAGTGCGGTCCTTTTCCTCAATTGCTAACGCCTCTGGTTTTCGATTTGTCATTTCAGGATCGATCGGGGAAACTGTCTTCAGGTGCGATTGCAAACCTAGTGGATGAAGTCGGTTGCGCCGTAATCTATGATGAAGCCCTACCGGAGCCGGTTTCTGTCGACATGTCGATTTCGTATATGTCGACTGCCGACGTCGATGTACGTATAACATTCTCCTTCACTCCCTAGATTCACTTCACAAGCTCTAAATCAAACAAAAAAAGAAGAAAAATGAAATCTAAATTACGAAGTGTGAATATCTGCAGGATGAATTGGAAATAGTGTCGAGGCTCTTAGGGCAGAAAGGGCGTTATTCTGGAACCAGTGTGGTTATTAAGAACAAAGGGACGGGAGAAATTGTTGCAGAAGGAAGACATTCGTTGTTCAGCATACGACCGAGTGTGAACTCTAAACTGTGAAAATGGTAAGTGCTGCCATTTTAATTATAGATCGAAAAAATATTTTCTGAATCTGCATCCTGATGTTGATAGATTTGAACTTAGAACAGCACCTAAGTTGAAATGTAATATTTGTTGTATAAATTCTATTTTGGTTGCTCTCGTTTGAAATTTGTTATATGTTAGTTTTCC

mRNA sequence

ATCCGACGTCCAGACAAGAAATGCTTGAAAGGATCCACCGTCCATTTGAGTGGAGCACCGAACTCTACATACTCCTGCACCGCACTGGATTATTCAATAAAAATATGGGTCTTTCGATAGCCAAGATTGATCAGTGAGGGTTCGAGAGAGAAGATGAAGAAAATTGAAAGCGAAATCATGGAGAAGACGAAGCAGCTTCTGGAATTGAGTCAGGAGGAAGCGAACGCCGTGGAGAAGCTCGACGTCCGGCCGAGGAAAGCCGGAGAGTCATGCTTCTATACCTTCTTCGCTCTCAGAGGCATCCGAGTCGACCGTTCCGAACCAGGGCTCGTCGTTTGTACCCTAAAGGTCCCTCCGCGCCTCACAGATCGATCGGGGAAACTGTCTTCAGGTGCGATTGCAAACCTAGTGGATGAAGTCGGTTGCGCCGTAATCTATGATGAAGCCCTACCGGAGCCGGTTTCTGTCGACATGTCGATTTCGTATATGTCGACTGCCGACGTCGATGATGAATTGGAAATAGTGTCGAGGCTCTTAGGGCAGAAAGGGCGTTATTCTGGAACCAGTGTGGTTATTAAGAACAAAGGGACGGGAGAAATTGTTGCAGAAGGAAGACATTCGTTGTTCAGCATACGACCGAGTGTGAACTCTAAACTGTGAAAATGGTAAGTGCTGCCATTTTAATTATAGATCGAAAAAATATTTTCTGAATCTGCATCCTGATGTTGATAGATTTGAACTTAGAACAGCACCTAAGTTGAAATGTAATATTTGTTGTATAAATTCTATTTTGGTTGCTCTCGTTTGAAATTTGTTATATGTTAGTTTTCC

Coding sequence (CDS)

ATGAAGAAAATTGAAAGCGAAATCATGGAGAAGACGAAGCAGCTTCTGGAATTGAGTCAGGAGGAAGCGAACGCCGTGGAGAAGCTCGACGTCCGGCCGAGGAAAGCCGGAGAGTCATGCTTCTATACCTTCTTCGCTCTCAGAGGCATCCGAGTCGACCGTTCCGAACCAGGGCTCGTCGTTTGTACCCTAAAGGTCCCTCCGCGCCTCACAGATCGATCGGGGAAACTGTCTTCAGGTGCGATTGCAAACCTAGTGGATGAAGTCGGTTGCGCCGTAATCTATGATGAAGCCCTACCGGAGCCGGTTTCTGTCGACATGTCGATTTCGTATATGTCGACTGCCGACGTCGATGATGAATTGGAAATAGTGTCGAGGCTCTTAGGGCAGAAAGGGCGTTATTCTGGAACCAGTGTGGTTATTAAGAACAAAGGGACGGGAGAAATTGTTGCAGAAGGAAGACATTCGTTGTTCAGCATACGACCGAGTGTGAACTCTAAACTGTGA

Protein sequence

MKKIESEIMEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLVVCTLKVPPRLTDRSGKLSSGAIANLVDEVGCAVIYDEALPEPVSVDMSISYMSTADVDDELEIVSRLLGQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIRPSVNSKL

Homology

[Close]

BLAST of Carg03348 vs. NCBI nr
Match: XP_022943771.1 (uncharacterized protein LOC111448424 [Cucurbita moschata] >KAG7010519.1 Acyl-coenzyme A thioesterase 13 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 324.3 bits (830), Expect = 6.1e-85
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MKKIESEIMEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLV 60
           MKKIESEIMEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLV
Sbjct: 1   MKKIESEIMEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLV 60

Query: 61  VCTLKVPPRLTDRSGKLSSGAIANLVDEVGCAVIYDEALPEPVSVDMSISYMSTADVDDE 120
           VCTLKVPPRLTDRSGKLSSGAIANLVDEVGCAVIYDEALPEPVSVDMSISYMSTADVDDE
Sbjct: 61  VCTLKVPPRLTDRSGKLSSGAIANLVDEVGCAVIYDEALPEPVSVDMSISYMSTADVDDE 120

Query: 121 LEIVSRLLGQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIRPSVNSKL 169
           LEIVSRLLGQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIRPSVNSKL
Sbjct: 121 LEIVSRLLGQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIRPSVNSKL 168

[Close]

BLAST of Carg03348 vs. NCBI nr
Match: XP_022986955.1 (uncharacterized protein LOC111484536 [Cucurbita maxima])

HSP 1 Score: 322.4 bits (825), Expect = 2.3e-84
Identity = 165/168 (98.21%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MKKIESEIMEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLV 60
           MKKIESEIMEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLV
Sbjct: 1   MKKIESEIMEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLV 60

Query: 61  VCTLKVPPRLTDRSGKLSSGAIANLVDEVGCAVIYDEALPEPVSVDMSISYMSTADVDDE 120
           VCTLKVPPRLTDR+GKLSSGAIANLVDEVGCA+IYDEALPEPVS+DMSISYMSTADVDDE
Sbjct: 61  VCTLKVPPRLTDRTGKLSSGAIANLVDEVGCAIIYDEALPEPVSIDMSISYMSTADVDDE 120

Query: 121 LEIVSRLLGQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIRPSVNSKL 169
           LEIVSRLLGQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIRPSVNSKL
Sbjct: 121 LEIVSRLLGQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIRPSVNSKL 168

[Close]

BLAST of Carg03348 vs. NCBI nr
Match: XP_023512724.1 (uncharacterized protein LOC111777390 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320.9 bits (821), Expect = 6.8e-84
Identity = 166/168 (98.81%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   MKKIESEIMEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLV 60
           MKKIESEIMEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLV
Sbjct: 2   MKKIESEIMEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLV 61

Query: 61  VCTLKVPPRLTDRSGKLSSGAIANLVDEVGCAVIYDEALPEPVSVDMSISYMSTADVDDE 120
           VCTLKVPPRLTDR+GKLSSGAIANLVDEVGCAVIYDEALPEPVSVDMSISYMSTADVDDE
Sbjct: 62  VCTLKVPPRLTDRTGKLSSGAIANLVDEVGCAVIYDEALPEPVSVDMSISYMSTADVDDE 121

Query: 121 LEIVSRLLGQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIRPSVNSKL 169
           LEIVSRLLGQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIRP VNSKL
Sbjct: 122 LEIVSRLLGQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIRPIVNSKL 169

[Close]

BLAST of Carg03348 vs. NCBI nr
Match: KAG6570673.1 (Acyl-coenzyme A thioesterase 13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 312.0 bits (798), Expect = 3.1e-81
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 9   MEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLVVCTLKVPP 68
           MEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLVVCTLKVPP
Sbjct: 1   MEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLVVCTLKVPP 60

Query: 69  RLTDRSGKLSSGAIANLVDEVGCAVIYDEALPEPVSVDMSISYMSTADVDDELEIVSRLL 128
           RLTDRSGKLSSGAIANLVDEVGCAVIYDEALPEPVSVDMSISYMSTADVDDELEIVSRLL
Sbjct: 61  RLTDRSGKLSSGAIANLVDEVGCAVIYDEALPEPVSVDMSISYMSTADVDDELEIVSRLL 120

Query: 129 GQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIRPSVNSKL 169
           GQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIRPSVNSKL
Sbjct: 121 GQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIRPSVNSKL 160

[Close]

BLAST of Carg03348 vs. NCBI nr
Match: XP_038901890.1 (uncharacterized protein LOC120088569 [Benincasa hispida])

HSP 1 Score: 279.6 bits (714), Expect = 1.7e-71
Identity = 142/161 (88.20%), Postives = 154/161 (95.65%), Query Frame = 0


Query: 9   MEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLVVCTLKVPP 68
           MEK KQLLEL+++E++AVEKL VRP+KAGE CFYTFFALRGIRVDR EPGLVVCTLKVPP
Sbjct: 1   MEKAKQLLELTRKESDAVEKLSVRPKKAGELCFYTFFALRGIRVDRVEPGLVVCTLKVPP 60

Query: 69  RLTDRSGKLSSGAIANLVDEVGCAVIYDEALPEPVSVDMSISYMSTADVDDELEIVSRLL 128
           RLTDRSGKL+SGAIANLVDE+GC+VIYDEALPEPVSVDMSISYMSTADVDDE+EIVS+LL
Sbjct: 61  RLTDRSGKLASGAIANLVDEIGCSVIYDEALPEPVSVDMSISYMSTADVDDEVEIVSKLL 120

Query: 129 GQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIRPS-VNSKL 169
           GQKGRYSGTSV+IKNK  GEIVAEGRHSLFSIRPS VNSKL
Sbjct: 121 GQKGRYSGTSVIIKNKRNGEIVAEGRHSLFSIRPSIVNSKL 161

[Close]

BLAST of Carg03348 vs. ExPASy Swiss-Prot
Match: Q9NPJ3 (Acyl-coenzyme A thioesterase 13 OS=Homo sapiens OX=9606 GN=ACOT13 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.2e-12
Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 0


Query: 57  PGLVVCTLKVPPRLTDRSGKLSSGAIANLVDEVG-CAVIYDEALPEPVSVDMSISYMSTA 116
           PG V+C +KV    T+  G L  G  A LVD +   A++  E     VSVDM+I+YMS A
Sbjct: 35  PGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPA 94

Query: 117 DVDDELEIVSRLLGQKGRYSGTSVVIKNKGTGEIVAEGRHS 157
            + +++ I + +L Q    + TSV + NK TG+++A+GRH+
Sbjct: 95  KLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHT 135

[Close]

BLAST of Carg03348 vs. ExPASy Swiss-Prot
Match: Q5R833 (Acyl-coenzyme A thioesterase 13 OS=Pongo abelii OX=9601 GN=ACOT13 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.2e-12
Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 0


Query: 57  PGLVVCTLKVPPRLTDRSGKLSSGAIANLVDEVG-CAVIYDEALPEPVSVDMSISYMSTA 116
           PG V+C +KV    T+  G L  G  A LVD +   A++  E     VSVDM+I+YMS A
Sbjct: 35  PGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPA 94

Query: 117 DVDDELEIVSRLLGQKGRYSGTSVVIKNKGTGEIVAEGRHS 157
            + +++ I + +L Q    + TSV + NK TG+++A+GRH+
Sbjct: 95  KLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHT 135

[Close]

BLAST of Carg03348 vs. ExPASy Swiss-Prot
Match: Q9CQR4 (Acyl-coenzyme A thioesterase 13 OS=Mus musculus OX=10090 GN=Acot13 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.1e-11
Identity = 39/111 (35.14%), Postives = 65/111 (58.56%), Query Frame = 0


Query: 47  LRGIRVDRSEPGLVVCTLKVPPRLTDRSGKLSSGAIANLVDEVG-CAVIYDEALPEPVSV 106
           L  + +  + P  ++C +KV  + T++ G L  G  A LVD +   A++  E     VSV
Sbjct: 25  LEKVTLVSAAPEKLICEMKVEEQHTNKLGTLHGGLTATLVDSISTMALMCTERGAPGVSV 84

Query: 107 DMSISYMSTADVDDELEIVSRLLGQKGRYSGTSVVIKNKGTGEIVAEGRHS 157
           DM+I+YMS A + +E+ I + +L Q    +  SV + NK TG+++A+GRH+
Sbjct: 85  DMNITYMSPAKIGEEIVITAHILKQGKTLAFASVDLTNKTTGKLIAQGRHT 135

[Close]

BLAST of Carg03348 vs. ExPASy TrEMBL
Match: A0A6J1FSM4 (uncharacterized protein LOC111448424 OS=Cucurbita moschata OX=3662 GN=LOC111448424 PE=3 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 3.0e-85
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MKKIESEIMEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLV 60
           MKKIESEIMEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLV
Sbjct: 1   MKKIESEIMEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLV 60

Query: 61  VCTLKVPPRLTDRSGKLSSGAIANLVDEVGCAVIYDEALPEPVSVDMSISYMSTADVDDE 120
           VCTLKVPPRLTDRSGKLSSGAIANLVDEVGCAVIYDEALPEPVSVDMSISYMSTADVDDE
Sbjct: 61  VCTLKVPPRLTDRSGKLSSGAIANLVDEVGCAVIYDEALPEPVSVDMSISYMSTADVDDE 120

Query: 121 LEIVSRLLGQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIRPSVNSKL 169
           LEIVSRLLGQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIRPSVNSKL
Sbjct: 121 LEIVSRLLGQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIRPSVNSKL 168

[Close]

BLAST of Carg03348 vs. ExPASy TrEMBL
Match: A0A6J1JFG8 (uncharacterized protein LOC111484536 OS=Cucurbita maxima OX=3661 GN=LOC111484536 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.1e-84
Identity = 165/168 (98.21%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MKKIESEIMEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLV 60
           MKKIESEIMEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLV
Sbjct: 1   MKKIESEIMEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLV 60

Query: 61  VCTLKVPPRLTDRSGKLSSGAIANLVDEVGCAVIYDEALPEPVSVDMSISYMSTADVDDE 120
           VCTLKVPPRLTDR+GKLSSGAIANLVDEVGCA+IYDEALPEPVS+DMSISYMSTADVDDE
Sbjct: 61  VCTLKVPPRLTDRTGKLSSGAIANLVDEVGCAIIYDEALPEPVSIDMSISYMSTADVDDE 120

Query: 121 LEIVSRLLGQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIRPSVNSKL 169
           LEIVSRLLGQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIRPSVNSKL
Sbjct: 121 LEIVSRLLGQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIRPSVNSKL 168

[Close]

BLAST of Carg03348 vs. ExPASy TrEMBL
Match: A0A5A7V7K8 (Putative acyl-CoA thioesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00440 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.4e-71
Identity = 143/165 (86.67%), Postives = 155/165 (93.94%), Query Frame = 0


Query: 5   ESEIMEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLVVCTL 64
           ESE+MEK KQLLEL++EE +AV+KL VRP+K G+SCFYTFFALRGI+VDR EPGLVVCTL
Sbjct: 31  ESELMEKAKQLLELTKEETDAVQKLPVRPKKPGQSCFYTFFALRGIQVDRVEPGLVVCTL 90

Query: 65  KVPPRLTDRSGKLSSGAIANLVDEVGCAVIYDEALPEPVSVDMSISYMSTADVDDELEIV 124
           KVPPRLTDRSGKL+SGAIANLVDE+GCAVIYDEALPEPVSVDMSISYMS+ADVDDELEIV
Sbjct: 91  KVPPRLTDRSGKLASGAIANLVDEIGCAVIYDEALPEPVSVDMSISYMSSADVDDELEIV 150

Query: 125 SRLLGQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIRPS-VNSKL 169
           S+LLGQKGRYSGT VVIKNK  GEIVAEGRHSLFSIRPS V SKL
Sbjct: 151 SKLLGQKGRYSGTRVVIKNKRNGEIVAEGRHSLFSIRPSTVKSKL 195

[Close]

BLAST of Carg03348 vs. ExPASy TrEMBL
Match: A0A1S3CM40 (uncharacterized protein LOC103502041 OS=Cucumis melo OX=3656 GN=LOC103502041 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.4e-71
Identity = 143/165 (86.67%), Postives = 155/165 (93.94%), Query Frame = 0


Query: 5   ESEIMEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLVVCTL 64
           ESE+MEK KQLLEL++EE +AV+KL VRP+K G+SCFYTFFALRGI+VDR EPGLVVCTL
Sbjct: 31  ESELMEKAKQLLELTKEETDAVQKLPVRPKKPGQSCFYTFFALRGIQVDRVEPGLVVCTL 90

Query: 65  KVPPRLTDRSGKLSSGAIANLVDEVGCAVIYDEALPEPVSVDMSISYMSTADVDDELEIV 124
           KVPPRLTDRSGKL+SGAIANLVDE+GCAVIYDEALPEPVSVDMSISYMS+ADVDDELEIV
Sbjct: 91  KVPPRLTDRSGKLASGAIANLVDEIGCAVIYDEALPEPVSVDMSISYMSSADVDDELEIV 150

Query: 125 SRLLGQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIRPS-VNSKL 169
           S+LLGQKGRYSGT VVIKNK  GEIVAEGRHSLFSIRPS V SKL
Sbjct: 151 SKLLGQKGRYSGTRVVIKNKRNGEIVAEGRHSLFSIRPSTVKSKL 195

[Close]

BLAST of Carg03348 vs. ExPASy TrEMBL
Match: A0A0A0KH68 (Acyl-CoA thioesterase OS=Cucumis sativus OX=3659 GN=Csa_6G187990 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68
Identity = 137/161 (85.09%), Postives = 149/161 (92.55%), Query Frame = 0


Query: 9   MEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLVVCTLKVPP 68
           MEK KQLLEL++EE +AV KL VRP+K G+SCFYTFF LRGIRVDR EPGLVVCTLKVPP
Sbjct: 1   MEKAKQLLELTKEETDAVHKLPVRPKKPGQSCFYTFFTLRGIRVDRVEPGLVVCTLKVPP 60

Query: 69  RLTDRSGKLSSGAIANLVDEVGCAVIYDEALPEPVSVDMSISYMSTADVDDELEIVSRLL 128
           RLTDRSGKL+SGAIANLVDE+GCAVIYD+ LPEPVSVDMSISYMS+ADVDDELEIVS+LL
Sbjct: 61  RLTDRSGKLASGAIANLVDEIGCAVIYDKDLPEPVSVDMSISYMSSADVDDELEIVSKLL 120

Query: 129 GQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIRP-SVNSKL 169
           GQKGRYSGTSVVIKNK  GEIVAEGRHSLFS+RP +V SKL
Sbjct: 121 GQKGRYSGTSVVIKNKRNGEIVAEGRHSLFSLRPTTVKSKL 161

[Close]

BLAST of Carg03348 vs. TAIR 10
Match: AT2G29590.1 (Thioesterase superfamily protein )

HSP 1 Score: 160.6 bits (405), Expect = 1.1e-39
Identity = 85/156 (54.49%), Postives = 110/156 (70.51%), Query Frame = 0


Query: 8   IMEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLVVCTLKVP 67
           +MEK  + L+LS E  +  E   V         FY  F+LRGIRV+R EPG + C+ KVP
Sbjct: 1   MMEKIMEYLQLSDEVVDDGEAPRVEEFLGEGKSFYENFSLRGIRVNRVEPGFISCSFKVP 60

Query: 68  PRLTDRSGKLSSGAIANLVDEVGCAVIYDEALPEPVSVDMSISYMSTADVDDELEIVSRL 127
            RLTDR   L++GAIANLVDEVG A+++ E LP  VSVDMSI+++S A + +ELEI SRL
Sbjct: 61  LRLTDRDKNLANGAIANLVDEVGGALVHGEGLPMSVSVDMSIAFLSKAKLGEELEITSRL 120

Query: 128 LGQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIRPS 164
           LG++G Y GT VV++NK TGEI+AEGRHS+F  + S
Sbjct: 121 LGERGGYKGTIVVVRNKMTGEIIAEGRHSMFGRQAS 156

[Close]

BLAST of Carg03348 vs. TAIR 10
Match: AT1G04290.1 (Thioesterase superfamily protein )

HSP 1 Score: 93.6 bits (231), Expect = 1.6e-19
Identity = 55/151 (36.42%), Postives = 86/151 (56.95%), Query Frame = 0


Query: 9   MEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLVVCTLKVPP 68
           +E  K+ LE  ++E      +   P +     F   F   G++VD  EPG +VC++K+PP
Sbjct: 3   LESVKKYLEGDEDEKAKEPMVAKLPHR-----FLERFVTNGLKVDLIEPGRIVCSMKIPP 62

Query: 69  RLTDRSGKLSSGAIANLVDEVGCAVIYDE-ALPEPVSVDMSISYMSTADVDDELEIVSRL 128
            L +    L  GA A LVD +G AVIY   A    VSV++++SY+  A +D+E+EI S+ 
Sbjct: 63  HLLNAGKFLHGGATATLVDLIGSAVIYTAGASHSGVSVEINVSYLDAAFLDEEIEIESKA 122

Query: 129 LGQKGRYSGTSVVIKNKGTGEIVAEGRHSLF 159
           L      +  SV ++ K TG+I+A+GRH+ +
Sbjct: 123 LRVGKAVAVVSVELRKKTTGKIIAQGRHTKY 148

The following BLAST results are available for this feature:

BLAST of Carg03348 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943771.1	6.1e-85	100.00	uncharacterized protein LOC111448424 [Cucurbita moschata] >KAG7010519.1 Acyl-coe...	[more]
XP_022986955.1	2.3e-84	98.21	uncharacterized protein LOC111484536 [Cucurbita maxima]	[more]
XP_023512724.1	6.8e-84	98.81	uncharacterized protein LOC111777390 [Cucurbita pepo subsp. pepo]	[more]
KAG6570673.1	3.1e-81	100.00	Acyl-coenzyme A thioesterase 13, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038901890.1	1.7e-71	88.20	uncharacterized protein LOC120088569 [Benincasa hispida]	[more]

BLAST of Carg03348 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9NPJ3	4.2e-12	39.60	Acyl-coenzyme A thioesterase 13 OS=Homo sapiens OX=9606 GN=ACOT13 PE=1 SV=1	[more]
Q5R833	4.2e-12	39.60	Acyl-coenzyme A thioesterase 13 OS=Pongo abelii OX=9601 GN=ACOT13 PE=2 SV=1	[more]
Q9CQR4	2.1e-11	35.14	Acyl-coenzyme A thioesterase 13 OS=Mus musculus OX=10090 GN=Acot13 PE=1 SV=1	[more]

BLAST of Carg03348 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FSM4	3.0e-85	100.00	uncharacterized protein LOC111448424 OS=Cucurbita moschata OX=3662 GN=LOC1114484...	[more]
A0A6J1JFG8	1.1e-84	98.21	uncharacterized protein LOC111484536 OS=Cucurbita maxima OX=3661 GN=LOC111484536...	[more]
A0A5A7V7K8	1.4e-71	86.67	Putative acyl-CoA thioesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CM40	1.4e-71	86.67	uncharacterized protein LOC103502041 OS=Cucumis melo OX=3656 GN=LOC103502041 PE=...	[more]
A0A0A0KH68	1.1e-68	85.09	Acyl-CoA thioesterase OS=Cucumis sativus OX=3659 GN=Csa_6G187990 PE=3 SV=1	[more]

BLAST of Carg03348 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G29590.1	1.1e-39	54.49	Thioesterase superfamily protein	[more]
AT1G04290.1	1.6e-19	36.42	Thioesterase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..29
None	No IPR available	GENE3D	3.10.129.10	Hotdog Thioesterase	coord: 26..161 e-value: 6.1E-26 score: 93.0
None	No IPR available	PANTHER	PTHR21660:SF8	OS02G0521700 PROTEIN	coord: 9..161
None	No IPR available	CDD	cd03443	PaaI_thioesterase	coord: 49..158 e-value: 5.40269E-18 score: 72.9758
IPR006683	Thioesterase domain	PFAM	PF03061	4HBT	coord: 77..148 e-value: 5.7E-6 score: 26.6
IPR039298	Acyl-coenzyme A thioesterase 13	PANTHER	PTHR21660	THIOESTERASE SUPERFAMILY MEMBER-RELATED	coord: 9..161
IPR029069	HotDog domain superfamily	SUPERFAMILY	54637	Thioesterase/thiol ester dehydrase-isomerase	coord: 38..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03348-RA	Carg03348-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0047617	acyl-CoA hydrolase activity