Homology
BLAST of Carg03334 vs. NCBI nr
Match:
KAG7010533.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1278.5 bits (3307), Expect = 0.0e+00
Identity = 623/623 (100.00%), Postives = 623/623 (100.00%), Query Frame = 0
Query: 1 MYCSTRPLRSAAHFLKTSWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD 60
MYCSTRPLRSAAHFLKTSWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD
Sbjct: 1 MYCSTRPLRSAAHFLKTSWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD 60
Query: 61 IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDM 120
IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDM
Sbjct: 61 IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDM 120
Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSL 180
YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSL
Sbjct: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSL 180
Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300
KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300
Query: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360
HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI
Sbjct: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360
Query: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG
Sbjct: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
Query: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD
Sbjct: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI 540
DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI
Sbjct: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI 540
Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD
Sbjct: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
Query: 601 DAAGIRRLMSNRGVKKNPGFSWM 624
DAAGIRRLMSNRGVKKNPGFSWM
Sbjct: 601 DAAGIRRLMSNRGVKKNPGFSWM 623
BLAST of Carg03334 vs. NCBI nr
Match:
KAG6570686.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1268.4 bits (3281), Expect = 0.0e+00
Identity = 618/623 (99.20%), Postives = 619/623 (99.36%), Query Frame = 0
Query: 1 MYCSTRPLRSAAHFLKTSWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD 60
MYCSTRPLRSAAHFLK SWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD
Sbjct: 1 MYCSTRPLRSAAHFLKASWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD 60
Query: 61 IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDM 120
IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLG+QVHSAIVKLGFSLNPYISSALVDM
Sbjct: 61 IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120
Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSL 180
YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGC LMAITWFLEMLKQGIEPTPFSL
Sbjct: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCPLMAITWFLEMLKQGIEPTPFSL 180
Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300
KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300
Query: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360
HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI
Sbjct: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360
Query: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG
Sbjct: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
Query: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD
Sbjct: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI 540
DTSFLAVLTACSHVGLLDKGLEYFNLMRNRL EPPKLEHY TVVDLFGRAGNLHEAEAFI
Sbjct: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLVEPPKLEHYATVVDLFGRAGNLHEAEAFI 540
Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD
Sbjct: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
Query: 601 DAAGIRRLMSNRGVKKNPGFSWM 624
DAAGIRRLMSNRGVKKNPGFSWM
Sbjct: 601 DAAGIRRLMSNRGVKKNPGFSWM 623
BLAST of Carg03334 vs. NCBI nr
Match:
XP_022944325.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 1247.6 bits (3227), Expect = 0.0e+00
Identity = 606/623 (97.27%), Postives = 613/623 (98.39%), Query Frame = 0
Query: 1 MYCSTRPLRSAAHFLKTSWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD 60
MYCSTRPLRSAAHFLK SWKSNHVSFRALISC+HKDYEDD IQPSLQNVSQNQNLS+NVD
Sbjct: 1 MYCSTRPLRSAAHFLKASWKSNHVSFRALISCSHKDYEDDFIQPSLQNVSQNQNLSENVD 60
Query: 61 IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDM 120
IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLG+QVHSAIVKLGFSLNPYISSALVDM
Sbjct: 61 IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120
Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSL 180
YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYL AGC LMAITWFLEMLKQGIEPTPFSL
Sbjct: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITWFLEMLKQGIEPTPFSL 180
Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300
KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSS SCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300
Query: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360
HCRVIAQGFES+ YIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAV+AGFSNLGI
Sbjct: 301 HCRVIAQGFESHNYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVLAGFSNLGI 360
Query: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
GEEALECFIQMRREN+DVDFFTFTS+FRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG
Sbjct: 361 GEEALECFIQMRRENVDVDFFTFTSIFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
Query: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
LVSMYARCGAI DSKKVFS MNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD
Sbjct: 421 LVSMYARCGAIRDSKKVFSRMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI 540
DTSFLAVLTACSHVGLLDKGLEYFNLMRNRL EPPKLEHY TVVDLFGRAGNLHEAEAFI
Sbjct: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 540
Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD
Sbjct: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
Query: 601 DAAGIRRLMSNRGVKKNPGFSWM 624
DAAGIRRLMSNRGVKKNPGFSWM
Sbjct: 601 DAAGIRRLMSNRGVKKNPGFSWM 623
BLAST of Carg03334 vs. NCBI nr
Match:
XP_023512803.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1237.2 bits (3200), Expect = 0.0e+00
Identity = 604/623 (96.95%), Postives = 609/623 (97.75%), Query Frame = 0
Query: 1 MYCSTRPLRSAAHFLKTSWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD 60
MYCSTRPLRSAA FLK SWKSNHVSFRALISCNH+DYEDDSIQ SLQNVSQNQNLSDNVD
Sbjct: 1 MYCSTRPLRSAARFLKASWKSNHVSFRALISCNHEDYEDDSIQSSLQNVSQNQNLSDNVD 60
Query: 61 IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDM 120
IQFLVQLLRNGSPPTPHILSKTISAC KSGLLDLG+QVHSAIVKLGFSLNPYISSALVDM
Sbjct: 61 IQFLVQLLRNGSPPTPHILSKTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120
Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSL 180
YGKCWSMS AQKVFDEMQCPNVVTWNSLVTGYL AGC LMAITWFLEMLKQGIEPTPFSL
Sbjct: 121 YGKCWSMSKAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITWFLEMLKQGIEPTPFSL 180
Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300
KNVFTWTSMITGYA NQQPHEAMVLMREMLHLDLKPNYMTYNSLLSS SCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYAWNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300
Query: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360
HCRVIAQGFESN YIAATLVTAYSECCSSLEDYRKVCSNI ISDQISWNAVIAGFSNLGI
Sbjct: 301 HCRVIAQGFESNNYIAATLVTAYSECCSSLEDYRKVCSNIKISDQISWNAVIAGFSNLGI 360
Query: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
GEEALECFIQMRRENIDVDFFTFTS+FRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG
Sbjct: 361 GEEALECFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
Query: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
LVSMYARCGAISDSKKVFSTMNEHDLISWN+LLSGCAYHGCGEEVI+LFEQMRRTSVKPD
Sbjct: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNTLLSGCAYHGCGEEVINLFEQMRRTSVKPD 480
Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI 540
DTSFLAVLTACSHVGLLDKGLEYFNLMRNRL EPPKLEHY TVVDLFGRAGNLHEAEAFI
Sbjct: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLVEPPKLEHYATVVDLFGRAGNLHEAEAFI 540
Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD
Sbjct: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
Query: 601 DAAGIRRLMSNRGVKKNPGFSWM 624
DAA IRRLMSNRGVKKNPGFSWM
Sbjct: 601 DAARIRRLMSNRGVKKNPGFSWM 623
BLAST of Carg03334 vs. NCBI nr
Match:
XP_022986802.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucurbita maxima])
HSP 1 Score: 1228.0 bits (3176), Expect = 0.0e+00
Identity = 598/623 (95.99%), Postives = 608/623 (97.59%), Query Frame = 0
Query: 1 MYCSTRPLRSAAHFLKTSWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD 60
MYCSTRPL+SAAHFLK SWKSNHVSFRALISCN+KDYEDDSIQPSLQN+SQ QNLSDNVD
Sbjct: 1 MYCSTRPLQSAAHFLKASWKSNHVSFRALISCNYKDYEDDSIQPSLQNISQKQNLSDNVD 60
Query: 61 IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDM 120
IQFLVQLLRNGSPPTPHILS+TISAC KSGLLDLG+QVHSAIVKLGFSLNPYISSALVDM
Sbjct: 61 IQFLVQLLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120
Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSL 180
YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYL AGC LMAIT FLEMLKQGIEPTPFSL
Sbjct: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPFSL 180
Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300
KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSS SCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300
Query: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360
HCRVI QGFESN YIAATLVTAYSECCSSLEDYRKVCS +TISDQISWNAVIAGFSNLGI
Sbjct: 301 HCRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNLGI 360
Query: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
GEEALE FIQMRRENIDVDFFTFTS+FRAIGIGSALEEG+QIHGLVYKTGYGLNLFVQNG
Sbjct: 361 GEEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQNG 420
Query: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
LVSMYARCGAISDSKKVFS MN+HDLISWNSLLSGCAYHGCGEEVID+FEQMRRTSVKPD
Sbjct: 421 LVSMYARCGAISDSKKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRTSVKPD 480
Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI 540
DTSFLAVLTACSHVGLLDKGLEYFNLMRNRL EPPKLEHY TVVDLFGRAGNLHEAEAFI
Sbjct: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 540
Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD
Sbjct: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
Query: 601 DAAGIRRLMSNRGVKKNPGFSWM 624
DAA IRRLMSNRGVKKNPGFSWM
Sbjct: 601 DAARIRRLMSNRGVKKNPGFSWM 623
BLAST of Carg03334 vs. ExPASy Swiss-Prot
Match:
Q9SVP7 (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)
HSP 1 Score: 391.7 bits (1005), Expect = 1.5e-107
Identity = 203/554 (36.64%), Postives = 313/554 (56.50%), Query Frame = 0
Query: 70 NGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDMYGKCWSMSN 129
+G P + L+ + AC+ G L G Q+H+ KLGF+ N I AL+++Y KC +
Sbjct: 383 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442
Query: 130 AQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSLSGVLVGCSQ 189
A F E + NVV WN ++ Y + F +M + I P ++ +L C +
Sbjct: 443 ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 502
Query: 190 LQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSDKNVFTWTSM 249
L +LG Q+H +K F N V + LIDMY+K L+ + + + K+V +WT+M
Sbjct: 503 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTM 562
Query: 250 ITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQIHCRVIAQGF 309
I GY + +A+ R+ML ++ + + + +S+ + + +QIH + GF
Sbjct: 563 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF 622
Query: 310 ESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGIGEEALECFI 369
S+ LVT YS C +E+ D I+WNA+++GF G EEAL F+
Sbjct: 623 SSDLPFQNALVTLYSR-CGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFV 682
Query: 370 QMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNGLVSMYARCG 429
+M RE ID + FTF S +A + +++GKQ+H ++ KTGY V N L+SMYA+CG
Sbjct: 683 RMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCG 742
Query: 430 AISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPDDTSFLAVLT 489
+ISD++K F ++ + +SWN++++ + HG G E +D F+QM ++V+P+ + + VL+
Sbjct: 743 SISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLS 802
Query: 490 ACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFIENIPIEPGI 549
ACSH+GL+DKG+ YF M + PK EHY VVD+ RAG L A+ FI+ +PI+P
Sbjct: 803 ACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDA 862
Query: 550 SIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWDDAAGIRRLM 609
+++ LLSAC+VH N +I A LLEL P DSATY++LSN+ WD R+ M
Sbjct: 863 LVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKM 922
Query: 610 SNRGVKKNPGFSWM 624
+GVKK PG SW+
Sbjct: 923 KEKGVKKEPGQSWI 935
BLAST of Carg03334 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 391.7 bits (1005), Expect = 1.5e-107
Identity = 189/561 (33.69%), Postives = 328/561 (58.47%), Query Frame = 0
Query: 61 IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDM 120
+QF V++ + P + + + C L +G ++H +VK GFSL+ + + L +M
Sbjct: 120 LQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM 179
Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSL 180
Y KC ++ A+KVFD M ++V+WN++V GY G + MA+ M ++ ++P+ ++
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITI 239
Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
VL S L+ +G ++HG +++ F S V + T L+DMY+KC +LE +R++FD M +
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLE 299
Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300
+NV +W SMI Y +N+ P EAM++ ++ML +KP ++ L + + ++ + I
Sbjct: 300 RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359
Query: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360
H + G + N + +L++ Y + C ++ + + +SWNA+I GF+ G
Sbjct: 360 HKLSVELGLDRNVSVVNSLISMYCK-CKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 419
Query: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
+AL F QMR + D FT+ S+ AI S K IHG+V ++ N+FV
Sbjct: 420 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 479
Query: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
LV MYA+CGAI ++ +F M+E + +WN+++ G HG G+ ++LFE+M++ ++KP+
Sbjct: 480 LVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPN 539
Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI 540
+FL+V++ACSH GL++ GL+ F +M+ ++HY +VDL GRAG L+EA FI
Sbjct: 540 GVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFI 599
Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
+P++P +++Y A+L AC +H N + A + A++L EL P D +++L+N+ W+
Sbjct: 600 MQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWE 659
Query: 601 DAAGIRRLMSNRGVKKNPGFS 622
+R M +G++K PG S
Sbjct: 660 KVGQVRVSMLRQGLRKTPGCS 679
BLAST of Carg03334 vs. ExPASy Swiss-Prot
Match:
Q9SVA5 (Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E52 PE=3 SV=1)
HSP 1 Score: 377.1 bits (967), Expect = 3.9e-103
Identity = 193/568 (33.98%), Postives = 318/568 (55.99%), Query Frame = 0
Query: 59 VDIQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALV 118
V +Q QL+ + P +ILS +SAC+ L+ G Q+H+ I++ G ++ + + L+
Sbjct: 232 VSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLI 291
Query: 119 DMYGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPF 178
D Y KC + A K+F+ M N+++W +L++GY A+ F M K G++P +
Sbjct: 292 DSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMY 351
Query: 179 SLSGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIM 238
+ S +L C+ L A GTQ+H ++K ++ V LIDMY+KC L D+R+VFDI
Sbjct: 352 ACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF 411
Query: 239 SDKNVFTWTSMITGYAR---NQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFD 298
+ +V + +MI GY+R + HEA+ + R+M ++P+ +T+ SLL + +
Sbjct: 412 AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLG 471
Query: 299 QCKQIHCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGF 358
KQIH + G + + + L+ YS C L+D R V + + D + WN++ AG+
Sbjct: 472 LSKQIHGLMFKYGLNLDIFAGSALIDVYSN-CYCLKDSRLVFDEMKVKDLVIWNSMFAGY 531
Query: 359 SNLGIGEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNL 418
EEAL F++++ D FTF +M A G ++++ G++ H + K G N
Sbjct: 532 VQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNP 591
Query: 419 FVQNGLVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRT 478
++ N L+ MYA+CG+ D+ K F + D++ WNS++S A HG G++ + + E+M
Sbjct: 592 YITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSE 651
Query: 479 SVKPDDTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHE 538
++P+ +F+ VL+ACSH GL++ GL+ F LM R P+ EHY +V L GRAG L++
Sbjct: 652 GIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNK 711
Query: 539 AEAFIENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGR 598
A IE +P +P ++++LLS C GN ++A A+ + P DS ++ MLSN+
Sbjct: 712 ARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYAS 771
Query: 599 DGYWDDAAGIRRLMSNRGVKKNPGFSWM 624
G W +A +R M GV K PG SW+
Sbjct: 772 KGMWTEAKKVRERMKVEGVVKEPGRSWI 797
BLAST of Carg03334 vs. ExPASy Swiss-Prot
Match:
P0C898 (Putative pentatricopeptide repeat-containing protein At3g15130 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H86 PE=3 SV=1)
HSP 1 Score: 370.2 bits (949), Expect = 4.7e-101
Identity = 198/549 (36.07%), Postives = 308/549 (56.10%), Query Frame = 0
Query: 79 LSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDMYGKCWSMSNAQKVFDEMQ 138
L + C + GL D G QVH ++K G LN S+ L+DMY KC A KVFD M
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 139 CPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSLSGVLVGCSQLQAGKLGTQ 198
NVV+W++L++G++ G +++ F EM +QGI P F+ S L C L A + G Q
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 199 LHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSDKNVFTWTSMITGYARNQQ 258
+HG LK+ F V VG L+DMYSKC + ++ +VF + D+++ +W +MI G+
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188
Query: 259 PHEAMVLMREMLHLDLK--PNYMTYNSLLSSLSCPHHFDQCKQIHCRVIAQGFE--SNKY 318
+A+ M ++K P+ T SLL + S KQIH ++ GF S+
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248
Query: 319 IAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGIGEEALECFIQMRRE 378
I +LV Y + C L RK I ISW+++I G++ G EA+ F +++
Sbjct: 249 ITGSLVDLYVK-CGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 308
Query: 379 NIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNGLVSMYARCGAISDS 438
N +D F +S+ + L +GKQ+ L K GL V N +V MY +CG + ++
Sbjct: 309 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEA 368
Query: 439 KKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPDDTSFLAVLTACSHV 498
+K F+ M D+ISW +++G HG G++ + +F +M R +++PD+ +LAVL+ACSH
Sbjct: 369 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 428
Query: 499 GLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFIENIPIEPGISIYKA 558
G++ +G E F+ + P++EHY VVDL GRAG L EA+ I+ +PI+P + I++
Sbjct: 429 GMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQT 488
Query: 559 LLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWDDAAGIRRLMSNRGV 618
LLS C VHG+ ++ K LL + + A Y+M+SN+ G+ GYW++ R L + +G+
Sbjct: 489 LLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGL 548
Query: 619 KKNPGFSWM 624
KK G SW+
Sbjct: 549 KKEAGMSWV 556
BLAST of Carg03334 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 366.7 bits (940), Expect = 5.2e-100
Identity = 185/530 (34.91%), Postives = 306/530 (57.74%), Query Frame = 0
Query: 95 GMQVHSAIVKLGFSLNPYISSALVDMYGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLH 154
G Q+H I+K GF + ++LV Y K + +A+KVFDEM +V++WNS++ GY+
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 155 AGCSLMAITWFLEMLKQGIEPTPFSLSGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVV 214
G + ++ F++ML GIE ++ V GC+ + LG +H + +K FS
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333
Query: 215 GTGLIDMYSKCCNLEDSRRVFDIMSDKNVFTWTSMITGYARNQQPHEAMVLMREMLHLDL 274
L+DMYSKC +L+ ++ VF MSD++V ++TSMI GYAR EA+ L EM +
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 275 KPNYMTYNSLLSSLSCPHHFDQCKQIHCRVIAQGFESNKYIAATLVTAYSECCSSLEDYR 334
P+ T ++L+ + D+ K++H + + +++ L+ Y++ C S+++
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAK-CGSMQEAE 453
Query: 335 KVCSNITISDQISWNAVIAGFSNLGIGEEALECF-IQMRRENIDVDFFTFTSMFRAIGIG 394
V S + + D ISWN +I G+S EAL F + + + D T + A
Sbjct: 454 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 513
Query: 395 SALEEGKQIHGLVYKTGYGLNLFVQNGLVSMYARCGAISDSKKVFSTMNEHDLISWNSLL 454
SA ++G++IHG + + GY + V N LV MYA+CGA+ + +F + DL+SW ++
Sbjct: 514 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 573
Query: 455 SGCAYHGCGEEVIDLFEQMRRTSVKPDDTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFE 514
+G HG G+E I LF QMR+ ++ D+ SF+++L ACSH GL+D+G +FN+MR+
Sbjct: 574 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 633
Query: 515 PPKLEHYTTVVDLFGRAGNLHEAEAFIENIPIEPGISIYKALLSACLVHGNKDIAIRTAK 574
P +EHY +VD+ R G+L +A FIEN+PI P +I+ ALL C +H + +A + A+
Sbjct: 634 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 693
Query: 575 KLLELYPHDSATYIMLSNVLGRDGYWDDAAGIRRLMSNRGVKKNPGFSWM 624
K+ EL P ++ Y++++N+ W+ +R+ + RG++KNPG SW+
Sbjct: 694 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 742
BLAST of Carg03334 vs. ExPASy TrEMBL
Match:
A0A6J1FYL3 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111448803 PE=4 SV=1)
HSP 1 Score: 1247.6 bits (3227), Expect = 0.0e+00
Identity = 606/623 (97.27%), Postives = 613/623 (98.39%), Query Frame = 0
Query: 1 MYCSTRPLRSAAHFLKTSWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD 60
MYCSTRPLRSAAHFLK SWKSNHVSFRALISC+HKDYEDD IQPSLQNVSQNQNLS+NVD
Sbjct: 1 MYCSTRPLRSAAHFLKASWKSNHVSFRALISCSHKDYEDDFIQPSLQNVSQNQNLSENVD 60
Query: 61 IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDM 120
IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLG+QVHSAIVKLGFSLNPYISSALVDM
Sbjct: 61 IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120
Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSL 180
YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYL AGC LMAITWFLEMLKQGIEPTPFSL
Sbjct: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITWFLEMLKQGIEPTPFSL 180
Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300
KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSS SCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300
Query: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360
HCRVIAQGFES+ YIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAV+AGFSNLGI
Sbjct: 301 HCRVIAQGFESHNYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVLAGFSNLGI 360
Query: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
GEEALECFIQMRREN+DVDFFTFTS+FRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG
Sbjct: 361 GEEALECFIQMRRENVDVDFFTFTSIFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
Query: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
LVSMYARCGAI DSKKVFS MNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD
Sbjct: 421 LVSMYARCGAIRDSKKVFSRMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI 540
DTSFLAVLTACSHVGLLDKGLEYFNLMRNRL EPPKLEHY TVVDLFGRAGNLHEAEAFI
Sbjct: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 540
Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD
Sbjct: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
Query: 601 DAAGIRRLMSNRGVKKNPGFSWM 624
DAAGIRRLMSNRGVKKNPGFSWM
Sbjct: 601 DAAGIRRLMSNRGVKKNPGFSWM 623
BLAST of Carg03334 vs. ExPASy TrEMBL
Match:
A0A6J1J8K5 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111484444 PE=4 SV=1)
HSP 1 Score: 1228.0 bits (3176), Expect = 0.0e+00
Identity = 598/623 (95.99%), Postives = 608/623 (97.59%), Query Frame = 0
Query: 1 MYCSTRPLRSAAHFLKTSWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD 60
MYCSTRPL+SAAHFLK SWKSNHVSFRALISCN+KDYEDDSIQPSLQN+SQ QNLSDNVD
Sbjct: 1 MYCSTRPLQSAAHFLKASWKSNHVSFRALISCNYKDYEDDSIQPSLQNISQKQNLSDNVD 60
Query: 61 IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDM 120
IQFLVQLLRNGSPPTPHILS+TISAC KSGLLDLG+QVHSAIVKLGFSLNPYISSALVDM
Sbjct: 61 IQFLVQLLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120
Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSL 180
YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYL AGC LMAIT FLEMLKQGIEPTPFSL
Sbjct: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPFSL 180
Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300
KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSS SCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300
Query: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360
HCRVI QGFESN YIAATLVTAYSECCSSLEDYRKVCS +TISDQISWNAVIAGFSNLGI
Sbjct: 301 HCRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNLGI 360
Query: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
GEEALE FIQMRRENIDVDFFTFTS+FRAIGIGSALEEG+QIHGLVYKTGYGLNLFVQNG
Sbjct: 361 GEEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQNG 420
Query: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
LVSMYARCGAISDSKKVFS MN+HDLISWNSLLSGCAYHGCGEEVID+FEQMRRTSVKPD
Sbjct: 421 LVSMYARCGAISDSKKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRTSVKPD 480
Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI 540
DTSFLAVLTACSHVGLLDKGLEYFNLMRNRL EPPKLEHY TVVDLFGRAGNLHEAEAFI
Sbjct: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 540
Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD
Sbjct: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
Query: 601 DAAGIRRLMSNRGVKKNPGFSWM 624
DAA IRRLMSNRGVKKNPGFSWM
Sbjct: 601 DAARIRRLMSNRGVKKNPGFSWM 623
BLAST of Carg03334 vs. ExPASy TrEMBL
Match:
A0A5A7V802 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00240 PE=4 SV=1)
HSP 1 Score: 1039.6 bits (2687), Expect = 5.1e-300
Identity = 516/626 (82.43%), Postives = 555/626 (88.66%), Query Frame = 0
Query: 1 MYCSTRPLRSAAHFLKTS--WKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDN 60
MYCS R L SA H LK S SNH R LISC++ EDDSI+P LQ +
Sbjct: 1 MYCSIRLLHSAVHLLKPSSTLNSNH---RPLISCHYTHSEDDSIKPLLQT-------HNV 60
Query: 61 VDIQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALV 120
VD+QFLVQLLRNGSPPTP IL+KTIS C KS LLD G+QVHSAI+KLGFSLNPYI +ALV
Sbjct: 61 VDLQFLVQLLRNGSPPTPPILTKTISICTKSTLLDFGIQVHSAIIKLGFSLNPYIFTALV 120
Query: 121 DMYGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPF 180
DMYGKCWS+S+A KVF+EM P+VV+WNSLVTGYL AG LMA++ FLEMLK+GIEPTPF
Sbjct: 121 DMYGKCWSISDAHKVFEEMSRPSVVSWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPF 180
Query: 181 SLSGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIM 240
SLSGVLV CSQLQ G+LG+QLH +SLKLRFSSNVVVGTGLID+YSKCCNL+DSRRVFDIM
Sbjct: 181 SLSGVLVACSQLQKGELGSQLHAMSLKLRFSSNVVVGTGLIDVYSKCCNLDDSRRVFDIM 240
Query: 241 SDKNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCK 300
+KNVFTWTSMI+GYARNQ PHEAM+LMREMLHLDLKPN MTYNSLL+S SCP HFDQCK
Sbjct: 241 QNKNVFTWTSMISGYARNQLPHEAMILMREMLHLDLKPNGMTYNSLLNSFSCPRHFDQCK 300
Query: 301 QIHCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNL 360
QIHCR+IA+GFESN YIAATLVTAYSEC SSLEDYRK+CSNI +SDQISWNAVIAGF+NL
Sbjct: 301 QIHCRIIAEGFESNNYIAATLVTAYSECSSSLEDYRKLCSNIRMSDQISWNAVIAGFTNL 360
Query: 361 GIGEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQ 420
GIGEEALECFIQMRREN DVDFFTFTS+F+AIGI SALEEGKQIHGLVYKTGY LNL VQ
Sbjct: 361 GIGEEALECFIQMRRENFDVDFFTFTSIFKAIGITSALEEGKQIHGLVYKTGYALNLSVQ 420
Query: 421 NGLVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVK 480
NGLVSMYARCGAI DSKKVFS MNEHDLISWNSLLSGCAYHGCGEE IDLFE+MRRT +K
Sbjct: 421 NGLVSMYARCGAIRDSKKVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIK 480
Query: 481 PDDTSFLAVLTACSHVGLLDKGLEYFNLMRN-RLFEPPKLEHYTTVVDLFGRAGNLHEAE 540
PD+TSFLAVLTACSHVGLLDKGLEYF LMRN L EPPKLEHY TVVDLFGRAG L EAE
Sbjct: 481 PDNTSFLAVLTACSHVGLLDKGLEYFKLMRNSELIEPPKLEHYATVVDLFGRAGKLREAE 540
Query: 541 AFIENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDG 600
AFIE+IPIEPGISIYKALLSACL+HGNKDIAIRTAKKLLELYP+D ATYIMLSN LGRDG
Sbjct: 541 AFIESIPIEPGISIYKALLSACLIHGNKDIAIRTAKKLLELYPYDPATYIMLSNALGRDG 600
Query: 601 YWDDAAGIRRLMSNRGVKKNPGFSWM 624
YWDDAA IRRLMSNRGVKK PGFSWM
Sbjct: 601 YWDDAARIRRLMSNRGVKKEPGFSWM 616
BLAST of Carg03334 vs. ExPASy TrEMBL
Match:
A0A1S3CKQ6 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502059 PE=4 SV=1)
HSP 1 Score: 1039.6 bits (2687), Expect = 5.1e-300
Identity = 516/626 (82.43%), Postives = 555/626 (88.66%), Query Frame = 0
Query: 1 MYCSTRPLRSAAHFLKTS--WKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDN 60
MYCS R L SA H LK S SNH R LISC++ EDDSI+P LQ +
Sbjct: 1 MYCSIRLLHSAVHLLKPSSTLNSNH---RPLISCHYTHSEDDSIKPLLQT-------HNV 60
Query: 61 VDIQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALV 120
VD+QFLVQLLRNGSPPTP IL+KTIS C KS LLD G+QVHSAI+KLGFSLNPYI +ALV
Sbjct: 61 VDLQFLVQLLRNGSPPTPPILTKTISICTKSTLLDFGIQVHSAIIKLGFSLNPYIFTALV 120
Query: 121 DMYGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPF 180
DMYGKCWS+S+A KVF+EM P+VV+WNSLVTGYL AG LMA++ FLEMLK+GIEPTPF
Sbjct: 121 DMYGKCWSISDAHKVFEEMSRPSVVSWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPF 180
Query: 181 SLSGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIM 240
SLSGVLV CSQLQ G+LG+QLH +SLKLRFSSNVVVGTGLID+YSKCCNL+DSRRVFDIM
Sbjct: 181 SLSGVLVACSQLQKGELGSQLHAMSLKLRFSSNVVVGTGLIDVYSKCCNLDDSRRVFDIM 240
Query: 241 SDKNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCK 300
+KNVFTWTSMI+GYARNQ PHEAM+LMREMLHLDLKPN MTYNSLL+S SCP HFDQCK
Sbjct: 241 QNKNVFTWTSMISGYARNQLPHEAMILMREMLHLDLKPNGMTYNSLLNSFSCPRHFDQCK 300
Query: 301 QIHCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNL 360
QIHCR+IA+GFESN YIAATLVTAYSEC SSLEDYRK+CSNI +SDQISWNAVIAGF+NL
Sbjct: 301 QIHCRIIAEGFESNNYIAATLVTAYSECSSSLEDYRKLCSNIRMSDQISWNAVIAGFTNL 360
Query: 361 GIGEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQ 420
GIGEEALECFIQMRREN DVDFFTFTS+F+AIGI SALEEGKQIHGLVYKTGY LNL VQ
Sbjct: 361 GIGEEALECFIQMRRENFDVDFFTFTSIFKAIGITSALEEGKQIHGLVYKTGYALNLSVQ 420
Query: 421 NGLVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVK 480
NGLVSMYARCGAI DSKKVFS MNEHDLISWNSLLSGCAYHGCGEE IDLFE+MRRT +K
Sbjct: 421 NGLVSMYARCGAIRDSKKVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIK 480
Query: 481 PDDTSFLAVLTACSHVGLLDKGLEYFNLMRN-RLFEPPKLEHYTTVVDLFGRAGNLHEAE 540
PD+TSFLAVLTACSHVGLLDKGLEYF LMRN L EPPKLEHY TVVDLFGRAG L EAE
Sbjct: 481 PDNTSFLAVLTACSHVGLLDKGLEYFKLMRNSELIEPPKLEHYATVVDLFGRAGKLREAE 540
Query: 541 AFIENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDG 600
AFIE+IPIEPGISIYKALLSACL+HGNKDIAIRTAKKLLELYP+D ATYIMLSN LGRDG
Sbjct: 541 AFIESIPIEPGISIYKALLSACLIHGNKDIAIRTAKKLLELYPYDPATYIMLSNALGRDG 600
Query: 601 YWDDAAGIRRLMSNRGVKKNPGFSWM 624
YWDDAA IRRLMSNRGVKK PGFSWM
Sbjct: 601 YWDDAARIRRLMSNRGVKKEPGFSWM 616
BLAST of Carg03334 vs. ExPASy TrEMBL
Match:
A0A6J1D410 (putative pentatricopeptide repeat-containing protein At3g23330 OS=Momordica charantia OX=3673 GN=LOC111017068 PE=4 SV=1)
HSP 1 Score: 1038.5 bits (2684), Expect = 1.1e-299
Identity = 521/623 (83.63%), Postives = 557/623 (89.41%), Query Frame = 0
Query: 3 CSTRPLRSAAHFLKTS-WKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVDI 62
CSTR LRSA H LK S W +HVSFRA IS NH E PSL++V+Q NLSDN DI
Sbjct: 5 CSTRRLRSAVHLLKASFWIPSHVSFRASISRNHTHSE-----PSLRHVTQKHNLSDNFDI 64
Query: 63 QFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDMY 122
+ L+QLLRN S PTPH+LSKTISAC KSG LDLG+QVHSAIVKLGFSLN YISSALVDMY
Sbjct: 65 ELLLQLLRNASSPTPHLLSKTISACTKSGYLDLGIQVHSAIVKLGFSLNAYISSALVDMY 124
Query: 123 GKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSLS 182
GK SMSNAQKVFDEM+CPNVV+WN+LVT YL AG MAIT FLEML GIEPTPFSLS
Sbjct: 125 GKYCSMSNAQKVFDEMECPNVVSWNALVTCYLQAGRPEMAITLFLEMLNVGIEPTPFSLS 184
Query: 183 GVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSDK 242
GVLVGCSQLQ GKLG+QLH SLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVF+IMS++
Sbjct: 185 GVLVGCSQLQDGKLGSQLHCFSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFNIMSNR 244
Query: 243 NVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQIH 302
NVFTWTSMI+GYARNQ+P EAMVL+R ML LDLKPNYMTYNSLLSS S H+F QCKQIH
Sbjct: 245 NVFTWTSMISGYARNQKPDEAMVLVRAMLRLDLKPNYMTYNSLLSSFSSSHNFHQCKQIH 304
Query: 303 CRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGIG 362
CR+IA+GFESN YIAA+LVTAYSECCSSLEDYRKVCS IT+ DQISWNAVIAGFSNLGIG
Sbjct: 305 CRIIAEGFESNNYIAASLVTAYSECCSSLEDYRKVCSAITMFDQISWNAVIAGFSNLGIG 364
Query: 363 EEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNGL 422
EEALECFIQMR+ NIDVDFFTFTS+FRAIGI SALEEG+QIHGLVYKTG+ LNLFVQNGL
Sbjct: 365 EEALECFIQMRQANIDVDFFTFTSIFRAIGITSALEEGRQIHGLVYKTGFALNLFVQNGL 424
Query: 423 VSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPDD 482
VSMYARCGAISDSKKVFS MNEHDLISWNSLLSGCAYHG GEE IDLFEQMRRTSVKPD+
Sbjct: 425 VSMYARCGAISDSKKVFSMMNEHDLISWNSLLSGCAYHGRGEEAIDLFEQMRRTSVKPDN 484
Query: 483 TSFLAVLTACSHVGLLDKGLEYFNLMRN-RLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI 542
TSFL+VLTACSHVGLLDKGLEYFNLM N L EPPKLEHY TVVDLFGRAGNLHEAEAFI
Sbjct: 485 TSFLSVLTACSHVGLLDKGLEYFNLMINSNLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 544
Query: 543 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 602
E+I +EPG SIYK+LLSACL+HGNKDIAIRTAKK+L+LYPHD ATYIMLSNVL RDG WD
Sbjct: 545 ESITVEPGPSIYKSLLSACLIHGNKDIAIRTAKKILQLYPHDPATYIMLSNVLVRDGNWD 604
Query: 603 DAAGIRRLMSNRGVKKNPGFSWM 624
DAA +RRLMSNRGVKKNPGFSWM
Sbjct: 605 DAARVRRLMSNRGVKKNPGFSWM 622
BLAST of Carg03334 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 391.7 bits (1005), Expect = 1.1e-108
Identity = 189/561 (33.69%), Postives = 328/561 (58.47%), Query Frame = 0
Query: 61 IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDM 120
+QF V++ + P + + + C L +G ++H +VK GFSL+ + + L +M
Sbjct: 120 LQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM 179
Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSL 180
Y KC ++ A+KVFD M ++V+WN++V GY G + MA+ M ++ ++P+ ++
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITI 239
Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
VL S L+ +G ++HG +++ F S V + T L+DMY+KC +LE +R++FD M +
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLE 299
Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300
+NV +W SMI Y +N+ P EAM++ ++ML +KP ++ L + + ++ + I
Sbjct: 300 RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359
Query: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360
H + G + N + +L++ Y + C ++ + + +SWNA+I GF+ G
Sbjct: 360 HKLSVELGLDRNVSVVNSLISMYCK-CKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 419
Query: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
+AL F QMR + D FT+ S+ AI S K IHG+V ++ N+FV
Sbjct: 420 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 479
Query: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
LV MYA+CGAI ++ +F M+E + +WN+++ G HG G+ ++LFE+M++ ++KP+
Sbjct: 480 LVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPN 539
Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI 540
+FL+V++ACSH GL++ GL+ F +M+ ++HY +VDL GRAG L+EA FI
Sbjct: 540 GVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFI 599
Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
+P++P +++Y A+L AC +H N + A + A++L EL P D +++L+N+ W+
Sbjct: 600 MQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWE 659
Query: 601 DAAGIRRLMSNRGVKKNPGFS 622
+R M +G++K PG S
Sbjct: 660 KVGQVRVSMLRQGLRKTPGCS 679
BLAST of Carg03334 vs. TAIR 10
Match:
AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 391.7 bits (1005), Expect = 1.1e-108
Identity = 203/554 (36.64%), Postives = 313/554 (56.50%), Query Frame = 0
Query: 70 NGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDMYGKCWSMSN 129
+G P + L+ + AC+ G L G Q+H+ KLGF+ N I AL+++Y KC +
Sbjct: 383 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442
Query: 130 AQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSLSGVLVGCSQ 189
A F E + NVV WN ++ Y + F +M + I P ++ +L C +
Sbjct: 443 ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 502
Query: 190 LQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSDKNVFTWTSM 249
L +LG Q+H +K F N V + LIDMY+K L+ + + + K+V +WT+M
Sbjct: 503 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTM 562
Query: 250 ITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQIHCRVIAQGF 309
I GY + +A+ R+ML ++ + + + +S+ + + +QIH + GF
Sbjct: 563 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF 622
Query: 310 ESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGIGEEALECFI 369
S+ LVT YS C +E+ D I+WNA+++GF G EEAL F+
Sbjct: 623 SSDLPFQNALVTLYSR-CGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFV 682
Query: 370 QMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNGLVSMYARCG 429
+M RE ID + FTF S +A + +++GKQ+H ++ KTGY V N L+SMYA+CG
Sbjct: 683 RMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCG 742
Query: 430 AISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPDDTSFLAVLT 489
+ISD++K F ++ + +SWN++++ + HG G E +D F+QM ++V+P+ + + VL+
Sbjct: 743 SISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLS 802
Query: 490 ACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFIENIPIEPGI 549
ACSH+GL+DKG+ YF M + PK EHY VVD+ RAG L A+ FI+ +PI+P
Sbjct: 803 ACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDA 862
Query: 550 SIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWDDAAGIRRLM 609
+++ LLSAC+VH N +I A LLEL P DSATY++LSN+ WD R+ M
Sbjct: 863 LVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKM 922
Query: 610 SNRGVKKNPGFSWM 624
+GVKK PG SW+
Sbjct: 923 KEKGVKKEPGQSWI 935
BLAST of Carg03334 vs. TAIR 10
Match:
AT4G39530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 377.1 bits (967), Expect = 2.7e-104
Identity = 193/568 (33.98%), Postives = 318/568 (55.99%), Query Frame = 0
Query: 59 VDIQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALV 118
V +Q QL+ + P +ILS +SAC+ L+ G Q+H+ I++ G ++ + + L+
Sbjct: 232 VSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLI 291
Query: 119 DMYGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPF 178
D Y KC + A K+F+ M N+++W +L++GY A+ F M K G++P +
Sbjct: 292 DSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMY 351
Query: 179 SLSGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIM 238
+ S +L C+ L A GTQ+H ++K ++ V LIDMY+KC L D+R+VFDI
Sbjct: 352 ACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF 411
Query: 239 SDKNVFTWTSMITGYAR---NQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFD 298
+ +V + +MI GY+R + HEA+ + R+M ++P+ +T+ SLL + +
Sbjct: 412 AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLG 471
Query: 299 QCKQIHCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGF 358
KQIH + G + + + L+ YS C L+D R V + + D + WN++ AG+
Sbjct: 472 LSKQIHGLMFKYGLNLDIFAGSALIDVYSN-CYCLKDSRLVFDEMKVKDLVIWNSMFAGY 531
Query: 359 SNLGIGEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNL 418
EEAL F++++ D FTF +M A G ++++ G++ H + K G N
Sbjct: 532 VQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNP 591
Query: 419 FVQNGLVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRT 478
++ N L+ MYA+CG+ D+ K F + D++ WNS++S A HG G++ + + E+M
Sbjct: 592 YITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSE 651
Query: 479 SVKPDDTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHE 538
++P+ +F+ VL+ACSH GL++ GL+ F LM R P+ EHY +V L GRAG L++
Sbjct: 652 GIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNK 711
Query: 539 AEAFIENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGR 598
A IE +P +P ++++LLS C GN ++A A+ + P DS ++ MLSN+
Sbjct: 712 ARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYAS 771
Query: 599 DGYWDDAAGIRRLMSNRGVKKNPGFSWM 624
G W +A +R M GV K PG SW+
Sbjct: 772 KGMWTEAKKVRERMKVEGVVKEPGRSWI 797
BLAST of Carg03334 vs. TAIR 10
Match:
AT3G15130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 370.2 bits (949), Expect = 3.4e-102
Identity = 198/549 (36.07%), Postives = 308/549 (56.10%), Query Frame = 0
Query: 79 LSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDMYGKCWSMSNAQKVFDEMQ 138
L + C + GL D G QVH ++K G LN S+ L+DMY KC A KVFD M
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 139 CPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSLSGVLVGCSQLQAGKLGTQ 198
NVV+W++L++G++ G +++ F EM +QGI P F+ S L C L A + G Q
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 199 LHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSDKNVFTWTSMITGYARNQQ 258
+HG LK+ F V VG L+DMYSKC + ++ +VF + D+++ +W +MI G+
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188
Query: 259 PHEAMVLMREMLHLDLK--PNYMTYNSLLSSLSCPHHFDQCKQIHCRVIAQGFE--SNKY 318
+A+ M ++K P+ T SLL + S KQIH ++ GF S+
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248
Query: 319 IAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGIGEEALECFIQMRRE 378
I +LV Y + C L RK I ISW+++I G++ G EA+ F +++
Sbjct: 249 ITGSLVDLYVK-CGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 308
Query: 379 NIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNGLVSMYARCGAISDS 438
N +D F +S+ + L +GKQ+ L K GL V N +V MY +CG + ++
Sbjct: 309 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEA 368
Query: 439 KKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPDDTSFLAVLTACSHV 498
+K F+ M D+ISW +++G HG G++ + +F +M R +++PD+ +LAVL+ACSH
Sbjct: 369 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 428
Query: 499 GLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFIENIPIEPGISIYKA 558
G++ +G E F+ + P++EHY VVDL GRAG L EA+ I+ +PI+P + I++
Sbjct: 429 GMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQT 488
Query: 559 LLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWDDAAGIRRLMSNRGV 618
LLS C VHG+ ++ K LL + + A Y+M+SN+ G+ GYW++ R L + +G+
Sbjct: 489 LLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGL 548
Query: 619 KKNPGFSWM 624
KK G SW+
Sbjct: 549 KKEAGMSWV 556
BLAST of Carg03334 vs. TAIR 10
Match:
AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 366.7 bits (940), Expect = 3.7e-101
Identity = 185/530 (34.91%), Postives = 306/530 (57.74%), Query Frame = 0
Query: 95 GMQVHSAIVKLGFSLNPYISSALVDMYGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLH 154
G Q+H I+K GF + ++LV Y K + +A+KVFDEM +V++WNS++ GY+
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 155 AGCSLMAITWFLEMLKQGIEPTPFSLSGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVV 214
G + ++ F++ML GIE ++ V GC+ + LG +H + +K FS
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333
Query: 215 GTGLIDMYSKCCNLEDSRRVFDIMSDKNVFTWTSMITGYARNQQPHEAMVLMREMLHLDL 274
L+DMYSKC +L+ ++ VF MSD++V ++TSMI GYAR EA+ L EM +
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 275 KPNYMTYNSLLSSLSCPHHFDQCKQIHCRVIAQGFESNKYIAATLVTAYSECCSSLEDYR 334
P+ T ++L+ + D+ K++H + + +++ L+ Y++ C S+++
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAK-CGSMQEAE 453
Query: 335 KVCSNITISDQISWNAVIAGFSNLGIGEEALECF-IQMRRENIDVDFFTFTSMFRAIGIG 394
V S + + D ISWN +I G+S EAL F + + + D T + A
Sbjct: 454 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 513
Query: 395 SALEEGKQIHGLVYKTGYGLNLFVQNGLVSMYARCGAISDSKKVFSTMNEHDLISWNSLL 454
SA ++G++IHG + + GY + V N LV MYA+CGA+ + +F + DL+SW ++
Sbjct: 514 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 573
Query: 455 SGCAYHGCGEEVIDLFEQMRRTSVKPDDTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFE 514
+G HG G+E I LF QMR+ ++ D+ SF+++L ACSH GL+D+G +FN+MR+
Sbjct: 574 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 633
Query: 515 PPKLEHYTTVVDLFGRAGNLHEAEAFIENIPIEPGISIYKALLSACLVHGNKDIAIRTAK 574
P +EHY +VD+ R G+L +A FIEN+PI P +I+ ALL C +H + +A + A+
Sbjct: 634 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 693
Query: 575 KLLELYPHDSATYIMLSNVLGRDGYWDDAAGIRRLMSNRGVKKNPGFSWM 624
K+ EL P ++ Y++++N+ W+ +R+ + RG++KNPG SW+
Sbjct: 694 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 742
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7010533.1 | 0.0e+00 | 100.00 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
KAG6570686.1 | 0.0e+00 | 99.20 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_022944325.1 | 0.0e+00 | 97.27 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucur... | [more] |
XP_023512803.1 | 0.0e+00 | 96.95 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucur... | [more] |
XP_022986802.1 | 0.0e+00 | 95.99 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucur... | [more] |
Match Name | E-value | Identity | Description | |
Q9SVP7 | 1.5e-107 | 36.64 | Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX... | [more] |
Q3E6Q1 | 1.5e-107 | 33.69 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
Q9SVA5 | 3.9e-103 | 33.98 | Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana OX... | [more] |
P0C898 | 4.7e-101 | 36.07 | Putative pentatricopeptide repeat-containing protein At3g15130 OS=Arabidopsis th... | [more] |
Q9SN39 | 5.2e-100 | 34.91 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FYL3 | 0.0e+00 | 97.27 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cuc... | [more] |
A0A6J1J8K5 | 0.0e+00 | 95.99 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cuc... | [more] |
A0A5A7V802 | 5.1e-300 | 82.43 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3CKQ6 | 5.1e-300 | 82.43 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Cucumis ... | [more] |
A0A6J1D410 | 1.1e-299 | 83.63 | putative pentatricopeptide repeat-containing protein At3g23330 OS=Momordica char... | [more] |
Match Name | E-value | Identity | Description | |
AT1G11290.1 | 1.1e-108 | 33.69 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G13650.1 | 1.1e-108 | 36.64 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G39530.1 | 2.7e-104 | 33.98 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G15130.1 | 3.4e-102 | 36.07 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G18750.1 | 3.7e-101 | 34.91 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |