Carg03334 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg03334
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationCarg_Chr20: 1904814 .. 1906685 (-)
RNA-Seq ExpressionCarg03334
SyntenyCarg03334
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACTGCTCCACTCGGCCCCTACGAAGCGCTGCTCATTTTCTCAAGACCTCCTGGAAATCAAACCACGTAAGTTTCAGAGCTTTGATTTCTTGTAATCACAAGGATTACGAAGATGATTCCATCCAACCCAGCCTTCAAAACGTTAGCCAAAACCAGAATTTATCAGACAATGTCGACATCCAATTCCTGGTTCAATTACTGCGAAATGGATCTCCTCCGACCCCTCATATTCTCAGTAAAACCATATCCGCCTGCGCGAAATCCGGCCTTCTGGACCTGGGAATGCAAGTCCACTCAGCCATTGTCAAGCTCGGGTTTTCTCTCAATCCTTATATTTCTAGTGCTCTTGTCGATATGTATGGTAAATGTTGGTCCATGTCGAATGCCCAGAAGGTGTTCGATGAAATGCAGTGTCCAAATGTAGTCACTTGGAATTCGTTGGTTACTGGTTATTTGCACGCAGGCTGTTCTTTAATGGCAATTACTTGGTTTTTAGAGATGCTAAAGCAGGGGATTGAACCCACCCCCTTCAGTTTATCTGGTGTTCTTGTGGGCTGCTCTCAGTTACAAGCTGGAAAGCTTGGAACTCAACTACATGGTGTTAGTTTGAAACTAAGGTTTTCGTCTAATGTTGTTGTGGGTACAGGGTTAATTGACATGTACTCCAAGTGTTGCAATCTCGAAGACTCGAGGAGAGTGTTCGATATAATGTCGGATAAAAACGTGTTTACTTGGACTTCAATGATCACTGGTTATGCTCGGAATCAGCAACCTCATGAGGCAATGGTTTTGATGCGAGAAATGCTGCATCTGGATCTTAAACCAAATTATATGACTTATAATAGCTTGCTAAGTTCACTTTCATGTCCCCATCATTTTGATCAATGCAAGCAAATTCATTGCCGGGTAATAGCGCAAGGGTTCGAGAGTAATAAGTATATAGCTGCTACCCTTGTTACTGCATATTCAGAATGTTGCAGTAGCTTGGAAGACTATAGGAAGGTTTGCTCAAACATTACCATATCAGATCAGATTTCATGGAATGCTGTTATAGCTGGTTTTTCTAACTTGGGCATAGGTGAGGAAGCTTTGGAATGTTTCATCCAAATGAGGCGGGAAAATATCGATGTAGACTTTTTCACGTTTACAAGCATGTTTAGGGCCATAGGGATAGGTTCAGCTCTAGAAGAAGGAAAGCAAATTCATGGTCTAGTGTATAAAACTGGATATGGCCTAAATTTATTCGTCCAAAATGGTCTTGTATCTATGTATGCTAGATGTGGTGCTATCAGTGATTCAAAGAAAGTGTTCTCAACGATGAACGAGCATGACTTAATATCATGGAATTCATTGCTTTCAGGATGTGCTTATCATGGTTGTGGTGAAGAGGTCATTGACTTGTTTGAGCAAATGAGGAGGACATCAGTCAAACCAGATGATACCTCCTTCCTTGCTGTGCTCACTGCATGTAGTCATGTTGGTTTGCTGGACAAGGGACTTGAATATTTCAACTTGATGAGAAATAGATTGTTTGAACCTCCAAAACTGGAGCATTACACTACAGTAGTCGACCTTTTTGGTCGAGCGGGAAATCTTCACGAAGCTGAAGCTTTCATTGAAAACATCCCTATAGAACCAGGGATATCAATTTACAAAGCTTTGCTGAGTGCTTGCCTAGTCCATGGGAACAAAGATATTGCCATTCGGACTGCAAAAAAGCTTCTGGAACTATATCCACATGACTCGGCTACTTACATCATGCTGTCAAATGTGTTGGGGAGAGATGGTTATTGGGATGATGCTGCTGGGATAAGGAGGCTAATGTCCAACAGAGGAGTCAAGAAAAACCCTGGTTTCAGTTGGATGTGA

mRNA sequence

ATGTACTGCTCCACTCGGCCCCTACGAAGCGCTGCTCATTTTCTCAAGACCTCCTGGAAATCAAACCACGTAAGTTTCAGAGCTTTGATTTCTTGTAATCACAAGGATTACGAAGATGATTCCATCCAACCCAGCCTTCAAAACGTTAGCCAAAACCAGAATTTATCAGACAATGTCGACATCCAATTCCTGGTTCAATTACTGCGAAATGGATCTCCTCCGACCCCTCATATTCTCAGTAAAACCATATCCGCCTGCGCGAAATCCGGCCTTCTGGACCTGGGAATGCAAGTCCACTCAGCCATTGTCAAGCTCGGGTTTTCTCTCAATCCTTATATTTCTAGTGCTCTTGTCGATATGTATGGTAAATGTTGGTCCATGTCGAATGCCCAGAAGGTGTTCGATGAAATGCAGTGTCCAAATGTAGTCACTTGGAATTCGTTGGTTACTGGTTATTTGCACGCAGGCTGTTCTTTAATGGCAATTACTTGGTTTTTAGAGATGCTAAAGCAGGGGATTGAACCCACCCCCTTCAGTTTATCTGGTGTTCTTGTGGGCTGCTCTCAGTTACAAGCTGGAAAGCTTGGAACTCAACTACATGGTGTTAGTTTGAAACTAAGGTTTTCGTCTAATGTTGTTGTGGGTACAGGGTTAATTGACATGTACTCCAAGTGTTGCAATCTCGAAGACTCGAGGAGAGTGTTCGATATAATGTCGGATAAAAACGTGTTTACTTGGACTTCAATGATCACTGGTTATGCTCGGAATCAGCAACCTCATGAGGCAATGGTTTTGATGCGAGAAATGCTGCATCTGGATCTTAAACCAAATTATATGACTTATAATAGCTTGCTAAGTTCACTTTCATGTCCCCATCATTTTGATCAATGCAAGCAAATTCATTGCCGGGTAATAGCGCAAGGGTTCGAGAGTAATAAGTATATAGCTGCTACCCTTGTTACTGCATATTCAGAATGTTGCAGTAGCTTGGAAGACTATAGGAAGGTTTGCTCAAACATTACCATATCAGATCAGATTTCATGGAATGCTGTTATAGCTGGTTTTTCTAACTTGGGCATAGGTGAGGAAGCTTTGGAATGTTTCATCCAAATGAGGCGGGAAAATATCGATGTAGACTTTTTCACGTTTACAAGCATGTTTAGGGCCATAGGGATAGGTTCAGCTCTAGAAGAAGGAAAGCAAATTCATGGTCTAGTGTATAAAACTGGATATGGCCTAAATTTATTCGTCCAAAATGGTCTTGTATCTATGTATGCTAGATGTGGTGCTATCAGTGATTCAAAGAAAGTGTTCTCAACGATGAACGAGCATGACTTAATATCATGGAATTCATTGCTTTCAGGATGTGCTTATCATGGTTGTGGTGAAGAGGTCATTGACTTGTTTGAGCAAATGAGGAGGACATCAGTCAAACCAGATGATACCTCCTTCCTTGCTGTGCTCACTGCATGTAGTCATGTTGGTTTGCTGGACAAGGGACTTGAATATTTCAACTTGATGAGAAATAGATTGTTTGAACCTCCAAAACTGGAGCATTACACTACAGTAGTCGACCTTTTTGGTCGAGCGGGAAATCTTCACGAAGCTGAAGCTTTCATTGAAAACATCCCTATAGAACCAGGGATATCAATTTACAAAGCTTTGCTGAGTGCTTGCCTAGTCCATGGGAACAAAGATATTGCCATTCGGACTGCAAAAAAGCTTCTGGAACTATATCCACATGACTCGGCTACTTACATCATGCTGTCAAATGTGTTGGGGAGAGATGGTTATTGGGATGATGCTGCTGGGATAAGGAGGCTAATGTCCAACAGAGGAGTCAAGAAAAACCCTGGTTTCAGTTGGATGTGA

Coding sequence (CDS)

ATGTACTGCTCCACTCGGCCCCTACGAAGCGCTGCTCATTTTCTCAAGACCTCCTGGAAATCAAACCACGTAAGTTTCAGAGCTTTGATTTCTTGTAATCACAAGGATTACGAAGATGATTCCATCCAACCCAGCCTTCAAAACGTTAGCCAAAACCAGAATTTATCAGACAATGTCGACATCCAATTCCTGGTTCAATTACTGCGAAATGGATCTCCTCCGACCCCTCATATTCTCAGTAAAACCATATCCGCCTGCGCGAAATCCGGCCTTCTGGACCTGGGAATGCAAGTCCACTCAGCCATTGTCAAGCTCGGGTTTTCTCTCAATCCTTATATTTCTAGTGCTCTTGTCGATATGTATGGTAAATGTTGGTCCATGTCGAATGCCCAGAAGGTGTTCGATGAAATGCAGTGTCCAAATGTAGTCACTTGGAATTCGTTGGTTACTGGTTATTTGCACGCAGGCTGTTCTTTAATGGCAATTACTTGGTTTTTAGAGATGCTAAAGCAGGGGATTGAACCCACCCCCTTCAGTTTATCTGGTGTTCTTGTGGGCTGCTCTCAGTTACAAGCTGGAAAGCTTGGAACTCAACTACATGGTGTTAGTTTGAAACTAAGGTTTTCGTCTAATGTTGTTGTGGGTACAGGGTTAATTGACATGTACTCCAAGTGTTGCAATCTCGAAGACTCGAGGAGAGTGTTCGATATAATGTCGGATAAAAACGTGTTTACTTGGACTTCAATGATCACTGGTTATGCTCGGAATCAGCAACCTCATGAGGCAATGGTTTTGATGCGAGAAATGCTGCATCTGGATCTTAAACCAAATTATATGACTTATAATAGCTTGCTAAGTTCACTTTCATGTCCCCATCATTTTGATCAATGCAAGCAAATTCATTGCCGGGTAATAGCGCAAGGGTTCGAGAGTAATAAGTATATAGCTGCTACCCTTGTTACTGCATATTCAGAATGTTGCAGTAGCTTGGAAGACTATAGGAAGGTTTGCTCAAACATTACCATATCAGATCAGATTTCATGGAATGCTGTTATAGCTGGTTTTTCTAACTTGGGCATAGGTGAGGAAGCTTTGGAATGTTTCATCCAAATGAGGCGGGAAAATATCGATGTAGACTTTTTCACGTTTACAAGCATGTTTAGGGCCATAGGGATAGGTTCAGCTCTAGAAGAAGGAAAGCAAATTCATGGTCTAGTGTATAAAACTGGATATGGCCTAAATTTATTCGTCCAAAATGGTCTTGTATCTATGTATGCTAGATGTGGTGCTATCAGTGATTCAAAGAAAGTGTTCTCAACGATGAACGAGCATGACTTAATATCATGGAATTCATTGCTTTCAGGATGTGCTTATCATGGTTGTGGTGAAGAGGTCATTGACTTGTTTGAGCAAATGAGGAGGACATCAGTCAAACCAGATGATACCTCCTTCCTTGCTGTGCTCACTGCATGTAGTCATGTTGGTTTGCTGGACAAGGGACTTGAATATTTCAACTTGATGAGAAATAGATTGTTTGAACCTCCAAAACTGGAGCATTACACTACAGTAGTCGACCTTTTTGGTCGAGCGGGAAATCTTCACGAAGCTGAAGCTTTCATTGAAAACATCCCTATAGAACCAGGGATATCAATTTACAAAGCTTTGCTGAGTGCTTGCCTAGTCCATGGGAACAAAGATATTGCCATTCGGACTGCAAAAAAGCTTCTGGAACTATATCCACATGACTCGGCTACTTACATCATGCTGTCAAATGTGTTGGGGAGAGATGGTTATTGGGATGATGCTGCTGGGATAAGGAGGCTAATGTCCAACAGAGGAGTCAAGAAAAACCCTGGTTTCAGTTGGATGTGA

Protein sequence

MYCSTRPLRSAAHFLKTSWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVDIQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDMYGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSLSGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSDKNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQIHCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGIGEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNGLVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPDDTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFIENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWDDAAGIRRLMSNRGVKKNPGFSWM
Homology
BLAST of Carg03334 vs. NCBI nr
Match: KAG7010533.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1278.5 bits (3307), Expect = 0.0e+00
Identity = 623/623 (100.00%), Postives = 623/623 (100.00%), Query Frame = 0

Query: 1   MYCSTRPLRSAAHFLKTSWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD 60
           MYCSTRPLRSAAHFLKTSWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD
Sbjct: 1   MYCSTRPLRSAAHFLKTSWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD 60

Query: 61  IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDM 120
           IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDM
Sbjct: 61  IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDM 120

Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSL 180
           YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSL
Sbjct: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSL 180

Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
           SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240

Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300
           KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300

Query: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360
           HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI
Sbjct: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360

Query: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
           GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG
Sbjct: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420

Query: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
           LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD
Sbjct: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480

Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI 540
           DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI
Sbjct: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI 540

Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
           ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD
Sbjct: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600

Query: 601 DAAGIRRLMSNRGVKKNPGFSWM 624
           DAAGIRRLMSNRGVKKNPGFSWM
Sbjct: 601 DAAGIRRLMSNRGVKKNPGFSWM 623

BLAST of Carg03334 vs. NCBI nr
Match: KAG6570686.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1268.4 bits (3281), Expect = 0.0e+00
Identity = 618/623 (99.20%), Postives = 619/623 (99.36%), Query Frame = 0

Query: 1   MYCSTRPLRSAAHFLKTSWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD 60
           MYCSTRPLRSAAHFLK SWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD
Sbjct: 1   MYCSTRPLRSAAHFLKASWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD 60

Query: 61  IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDM 120
           IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLG+QVHSAIVKLGFSLNPYISSALVDM
Sbjct: 61  IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120

Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSL 180
           YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGC LMAITWFLEMLKQGIEPTPFSL
Sbjct: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCPLMAITWFLEMLKQGIEPTPFSL 180

Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
           SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240

Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300
           KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300

Query: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360
           HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI
Sbjct: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360

Query: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
           GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG
Sbjct: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420

Query: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
           LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD
Sbjct: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480

Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI 540
           DTSFLAVLTACSHVGLLDKGLEYFNLMRNRL EPPKLEHY TVVDLFGRAGNLHEAEAFI
Sbjct: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLVEPPKLEHYATVVDLFGRAGNLHEAEAFI 540

Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
           ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD
Sbjct: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600

Query: 601 DAAGIRRLMSNRGVKKNPGFSWM 624
           DAAGIRRLMSNRGVKKNPGFSWM
Sbjct: 601 DAAGIRRLMSNRGVKKNPGFSWM 623

BLAST of Carg03334 vs. NCBI nr
Match: XP_022944325.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 1247.6 bits (3227), Expect = 0.0e+00
Identity = 606/623 (97.27%), Postives = 613/623 (98.39%), Query Frame = 0

Query: 1   MYCSTRPLRSAAHFLKTSWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD 60
           MYCSTRPLRSAAHFLK SWKSNHVSFRALISC+HKDYEDD IQPSLQNVSQNQNLS+NVD
Sbjct: 1   MYCSTRPLRSAAHFLKASWKSNHVSFRALISCSHKDYEDDFIQPSLQNVSQNQNLSENVD 60

Query: 61  IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDM 120
           IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLG+QVHSAIVKLGFSLNPYISSALVDM
Sbjct: 61  IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120

Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSL 180
           YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYL AGC LMAITWFLEMLKQGIEPTPFSL
Sbjct: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITWFLEMLKQGIEPTPFSL 180

Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
           SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240

Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300
           KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSS SCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300

Query: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360
           HCRVIAQGFES+ YIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAV+AGFSNLGI
Sbjct: 301 HCRVIAQGFESHNYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVLAGFSNLGI 360

Query: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
           GEEALECFIQMRREN+DVDFFTFTS+FRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG
Sbjct: 361 GEEALECFIQMRRENVDVDFFTFTSIFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420

Query: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
           LVSMYARCGAI DSKKVFS MNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD
Sbjct: 421 LVSMYARCGAIRDSKKVFSRMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480

Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI 540
           DTSFLAVLTACSHVGLLDKGLEYFNLMRNRL EPPKLEHY TVVDLFGRAGNLHEAEAFI
Sbjct: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 540

Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
           ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD
Sbjct: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600

Query: 601 DAAGIRRLMSNRGVKKNPGFSWM 624
           DAAGIRRLMSNRGVKKNPGFSWM
Sbjct: 601 DAAGIRRLMSNRGVKKNPGFSWM 623

BLAST of Carg03334 vs. NCBI nr
Match: XP_023512803.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1237.2 bits (3200), Expect = 0.0e+00
Identity = 604/623 (96.95%), Postives = 609/623 (97.75%), Query Frame = 0

Query: 1   MYCSTRPLRSAAHFLKTSWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD 60
           MYCSTRPLRSAA FLK SWKSNHVSFRALISCNH+DYEDDSIQ SLQNVSQNQNLSDNVD
Sbjct: 1   MYCSTRPLRSAARFLKASWKSNHVSFRALISCNHEDYEDDSIQSSLQNVSQNQNLSDNVD 60

Query: 61  IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDM 120
           IQFLVQLLRNGSPPTPHILSKTISAC KSGLLDLG+QVHSAIVKLGFSLNPYISSALVDM
Sbjct: 61  IQFLVQLLRNGSPPTPHILSKTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120

Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSL 180
           YGKCWSMS AQKVFDEMQCPNVVTWNSLVTGYL AGC LMAITWFLEMLKQGIEPTPFSL
Sbjct: 121 YGKCWSMSKAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITWFLEMLKQGIEPTPFSL 180

Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
           SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240

Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300
           KNVFTWTSMITGYA NQQPHEAMVLMREMLHLDLKPNYMTYNSLLSS SCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYAWNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300

Query: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360
           HCRVIAQGFESN YIAATLVTAYSECCSSLEDYRKVCSNI ISDQISWNAVIAGFSNLGI
Sbjct: 301 HCRVIAQGFESNNYIAATLVTAYSECCSSLEDYRKVCSNIKISDQISWNAVIAGFSNLGI 360

Query: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
           GEEALECFIQMRRENIDVDFFTFTS+FRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG
Sbjct: 361 GEEALECFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420

Query: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
           LVSMYARCGAISDSKKVFSTMNEHDLISWN+LLSGCAYHGCGEEVI+LFEQMRRTSVKPD
Sbjct: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNTLLSGCAYHGCGEEVINLFEQMRRTSVKPD 480

Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI 540
           DTSFLAVLTACSHVGLLDKGLEYFNLMRNRL EPPKLEHY TVVDLFGRAGNLHEAEAFI
Sbjct: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLVEPPKLEHYATVVDLFGRAGNLHEAEAFI 540

Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
           ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD
Sbjct: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600

Query: 601 DAAGIRRLMSNRGVKKNPGFSWM 624
           DAA IRRLMSNRGVKKNPGFSWM
Sbjct: 601 DAARIRRLMSNRGVKKNPGFSWM 623

BLAST of Carg03334 vs. NCBI nr
Match: XP_022986802.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 1228.0 bits (3176), Expect = 0.0e+00
Identity = 598/623 (95.99%), Postives = 608/623 (97.59%), Query Frame = 0

Query: 1   MYCSTRPLRSAAHFLKTSWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD 60
           MYCSTRPL+SAAHFLK SWKSNHVSFRALISCN+KDYEDDSIQPSLQN+SQ QNLSDNVD
Sbjct: 1   MYCSTRPLQSAAHFLKASWKSNHVSFRALISCNYKDYEDDSIQPSLQNISQKQNLSDNVD 60

Query: 61  IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDM 120
           IQFLVQLLRNGSPPTPHILS+TISAC KSGLLDLG+QVHSAIVKLGFSLNPYISSALVDM
Sbjct: 61  IQFLVQLLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120

Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSL 180
           YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYL AGC LMAIT FLEMLKQGIEPTPFSL
Sbjct: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPFSL 180

Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
           SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240

Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300
           KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSS SCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300

Query: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360
           HCRVI QGFESN YIAATLVTAYSECCSSLEDYRKVCS +TISDQISWNAVIAGFSNLGI
Sbjct: 301 HCRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNLGI 360

Query: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
           GEEALE FIQMRRENIDVDFFTFTS+FRAIGIGSALEEG+QIHGLVYKTGYGLNLFVQNG
Sbjct: 361 GEEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQNG 420

Query: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
           LVSMYARCGAISDSKKVFS MN+HDLISWNSLLSGCAYHGCGEEVID+FEQMRRTSVKPD
Sbjct: 421 LVSMYARCGAISDSKKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRTSVKPD 480

Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI 540
           DTSFLAVLTACSHVGLLDKGLEYFNLMRNRL EPPKLEHY TVVDLFGRAGNLHEAEAFI
Sbjct: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 540

Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
           ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD
Sbjct: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600

Query: 601 DAAGIRRLMSNRGVKKNPGFSWM 624
           DAA IRRLMSNRGVKKNPGFSWM
Sbjct: 601 DAARIRRLMSNRGVKKNPGFSWM 623

BLAST of Carg03334 vs. ExPASy Swiss-Prot
Match: Q9SVP7 (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 391.7 bits (1005), Expect = 1.5e-107
Identity = 203/554 (36.64%), Postives = 313/554 (56.50%), Query Frame = 0

Query: 70  NGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDMYGKCWSMSN 129
           +G  P  + L+  + AC+  G L  G Q+H+   KLGF+ N  I  AL+++Y KC  +  
Sbjct: 383 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442

Query: 130 AQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSLSGVLVGCSQ 189
           A   F E +  NVV WN ++  Y        +   F +M  + I P  ++   +L  C +
Sbjct: 443 ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 502

Query: 190 LQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSDKNVFTWTSM 249
           L   +LG Q+H   +K  F  N  V + LIDMY+K   L+ +  +    + K+V +WT+M
Sbjct: 503 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTM 562

Query: 250 ITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQIHCRVIAQGF 309
           I GY +     +A+   R+ML   ++ + +   + +S+ +      + +QIH +    GF
Sbjct: 563 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF 622

Query: 310 ESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGIGEEALECFI 369
            S+      LVT YS  C  +E+           D I+WNA+++GF   G  EEAL  F+
Sbjct: 623 SSDLPFQNALVTLYSR-CGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFV 682

Query: 370 QMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNGLVSMYARCG 429
           +M RE ID + FTF S  +A    + +++GKQ+H ++ KTGY     V N L+SMYA+CG
Sbjct: 683 RMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCG 742

Query: 430 AISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPDDTSFLAVLT 489
           +ISD++K F  ++  + +SWN++++  + HG G E +D F+QM  ++V+P+  + + VL+
Sbjct: 743 SISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLS 802

Query: 490 ACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFIENIPIEPGI 549
           ACSH+GL+DKG+ YF  M +     PK EHY  VVD+  RAG L  A+ FI+ +PI+P  
Sbjct: 803 ACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDA 862

Query: 550 SIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWDDAAGIRRLM 609
            +++ LLSAC+VH N +I    A  LLEL P DSATY++LSN+      WD     R+ M
Sbjct: 863 LVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKM 922

Query: 610 SNRGVKKNPGFSWM 624
             +GVKK PG SW+
Sbjct: 923 KEKGVKKEPGQSWI 935

BLAST of Carg03334 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 1.5e-107
Identity = 189/561 (33.69%), Postives = 328/561 (58.47%), Query Frame = 0

Query: 61  IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDM 120
           +QF V++  +   P  +  +  +  C     L +G ++H  +VK GFSL+ +  + L +M
Sbjct: 120 LQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM 179

Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSL 180
           Y KC  ++ A+KVFD M   ++V+WN++V GY   G + MA+     M ++ ++P+  ++
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITI 239

Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
             VL   S L+   +G ++HG +++  F S V + T L+DMY+KC +LE +R++FD M +
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLE 299

Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300
           +NV +W SMI  Y +N+ P EAM++ ++ML   +KP  ++    L + +     ++ + I
Sbjct: 300 RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359

Query: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360
           H   +  G + N  +  +L++ Y + C  ++    +   +     +SWNA+I GF+  G 
Sbjct: 360 HKLSVELGLDRNVSVVNSLISMYCK-CKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 419

Query: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
             +AL  F QMR   +  D FT+ S+  AI   S     K IHG+V ++    N+FV   
Sbjct: 420 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 479

Query: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
           LV MYA+CGAI  ++ +F  M+E  + +WN+++ G   HG G+  ++LFE+M++ ++KP+
Sbjct: 480 LVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPN 539

Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI 540
             +FL+V++ACSH GL++ GL+ F +M+        ++HY  +VDL GRAG L+EA  FI
Sbjct: 540 GVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFI 599

Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
             +P++P +++Y A+L AC +H N + A + A++L EL P D   +++L+N+      W+
Sbjct: 600 MQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWE 659

Query: 601 DAAGIRRLMSNRGVKKNPGFS 622
               +R  M  +G++K PG S
Sbjct: 660 KVGQVRVSMLRQGLRKTPGCS 679

BLAST of Carg03334 vs. ExPASy Swiss-Prot
Match: Q9SVA5 (Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E52 PE=3 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 3.9e-103
Identity = 193/568 (33.98%), Postives = 318/568 (55.99%), Query Frame = 0

Query: 59  VDIQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALV 118
           V +Q   QL+ +   P  +ILS  +SAC+    L+ G Q+H+ I++ G  ++  + + L+
Sbjct: 232 VSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLI 291

Query: 119 DMYGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPF 178
           D Y KC  +  A K+F+ M   N+++W +L++GY        A+  F  M K G++P  +
Sbjct: 292 DSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMY 351

Query: 179 SLSGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIM 238
           + S +L  C+ L A   GTQ+H  ++K    ++  V   LIDMY+KC  L D+R+VFDI 
Sbjct: 352 ACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF 411

Query: 239 SDKNVFTWTSMITGYAR---NQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFD 298
           +  +V  + +MI GY+R     + HEA+ + R+M    ++P+ +T+ SLL + +      
Sbjct: 412 AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLG 471

Query: 299 QCKQIHCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGF 358
             KQIH  +   G   + +  + L+  YS  C  L+D R V   + + D + WN++ AG+
Sbjct: 472 LSKQIHGLMFKYGLNLDIFAGSALIDVYSN-CYCLKDSRLVFDEMKVKDLVIWNSMFAGY 531

Query: 359 SNLGIGEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNL 418
                 EEAL  F++++      D FTF +M  A G  ++++ G++ H  + K G   N 
Sbjct: 532 VQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNP 591

Query: 419 FVQNGLVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRT 478
           ++ N L+ MYA+CG+  D+ K F +    D++ WNS++S  A HG G++ + + E+M   
Sbjct: 592 YITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSE 651

Query: 479 SVKPDDTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHE 538
            ++P+  +F+ VL+ACSH GL++ GL+ F LM  R    P+ EHY  +V L GRAG L++
Sbjct: 652 GIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNK 711

Query: 539 AEAFIENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGR 598
           A   IE +P +P   ++++LLS C   GN ++A   A+  +   P DS ++ MLSN+   
Sbjct: 712 ARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYAS 771

Query: 599 DGYWDDAAGIRRLMSNRGVKKNPGFSWM 624
            G W +A  +R  M   GV K PG SW+
Sbjct: 772 KGMWTEAKKVRERMKVEGVVKEPGRSWI 797

BLAST of Carg03334 vs. ExPASy Swiss-Prot
Match: P0C898 (Putative pentatricopeptide repeat-containing protein At3g15130 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H86 PE=3 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 4.7e-101
Identity = 198/549 (36.07%), Postives = 308/549 (56.10%), Query Frame = 0

Query: 79  LSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDMYGKCWSMSNAQKVFDEMQ 138
           L   +  C + GL D G QVH  ++K G  LN   S+ L+DMY KC     A KVFD M 
Sbjct: 9   LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68

Query: 139 CPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSLSGVLVGCSQLQAGKLGTQ 198
             NVV+W++L++G++  G    +++ F EM +QGI P  F+ S  L  C  L A + G Q
Sbjct: 69  ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128

Query: 199 LHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSDKNVFTWTSMITGYARNQQ 258
           +HG  LK+ F   V VG  L+DMYSKC  + ++ +VF  + D+++ +W +MI G+     
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188

Query: 259 PHEAMVLMREMLHLDLK--PNYMTYNSLLSSLSCPHHFDQCKQIHCRVIAQGFE--SNKY 318
             +A+     M   ++K  P+  T  SLL + S        KQIH  ++  GF   S+  
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248

Query: 319 IAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGIGEEALECFIQMRRE 378
           I  +LV  Y + C  L   RK    I     ISW+++I G++  G   EA+  F +++  
Sbjct: 249 ITGSLVDLYVK-CGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 308

Query: 379 NIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNGLVSMYARCGAISDS 438
           N  +D F  +S+       + L +GKQ+  L  K   GL   V N +V MY +CG + ++
Sbjct: 309 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEA 368

Query: 439 KKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPDDTSFLAVLTACSHV 498
           +K F+ M   D+ISW  +++G   HG G++ + +F +M R +++PD+  +LAVL+ACSH 
Sbjct: 369 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 428

Query: 499 GLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFIENIPIEPGISIYKA 558
           G++ +G E F+ +       P++EHY  VVDL GRAG L EA+  I+ +PI+P + I++ 
Sbjct: 429 GMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQT 488

Query: 559 LLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWDDAAGIRRLMSNRGV 618
           LLS C VHG+ ++     K LL +   + A Y+M+SN+ G+ GYW++    R L + +G+
Sbjct: 489 LLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGL 548

Query: 619 KKNPGFSWM 624
           KK  G SW+
Sbjct: 549 KKEAGMSWV 556

BLAST of Carg03334 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 5.2e-100
Identity = 185/530 (34.91%), Postives = 306/530 (57.74%), Query Frame = 0

Query: 95  GMQVHSAIVKLGFSLNPYISSALVDMYGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLH 154
           G Q+H  I+K GF     + ++LV  Y K   + +A+KVFDEM   +V++WNS++ GY+ 
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273

Query: 155 AGCSLMAITWFLEMLKQGIEPTPFSLSGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVV 214
            G +   ++ F++ML  GIE    ++  V  GC+  +   LG  +H + +K  FS     
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333

Query: 215 GTGLIDMYSKCCNLEDSRRVFDIMSDKNVFTWTSMITGYARNQQPHEAMVLMREMLHLDL 274
              L+DMYSKC +L+ ++ VF  MSD++V ++TSMI GYAR     EA+ L  EM    +
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393

Query: 275 KPNYMTYNSLLSSLSCPHHFDQCKQIHCRVIAQGFESNKYIAATLVTAYSECCSSLEDYR 334
            P+  T  ++L+  +     D+ K++H  +       + +++  L+  Y++ C S+++  
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAK-CGSMQEAE 453

Query: 335 KVCSNITISDQISWNAVIAGFSNLGIGEEALECF-IQMRRENIDVDFFTFTSMFRAIGIG 394
            V S + + D ISWN +I G+S      EAL  F + +  +    D  T   +  A    
Sbjct: 454 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 513

Query: 395 SALEEGKQIHGLVYKTGYGLNLFVQNGLVSMYARCGAISDSKKVFSTMNEHDLISWNSLL 454
           SA ++G++IHG + + GY  +  V N LV MYA+CGA+  +  +F  +   DL+SW  ++
Sbjct: 514 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 573

Query: 455 SGCAYHGCGEEVIDLFEQMRRTSVKPDDTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFE 514
           +G   HG G+E I LF QMR+  ++ D+ SF+++L ACSH GL+D+G  +FN+MR+    
Sbjct: 574 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 633

Query: 515 PPKLEHYTTVVDLFGRAGNLHEAEAFIENIPIEPGISIYKALLSACLVHGNKDIAIRTAK 574
            P +EHY  +VD+  R G+L +A  FIEN+PI P  +I+ ALL  C +H +  +A + A+
Sbjct: 634 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 693

Query: 575 KLLELYPHDSATYIMLSNVLGRDGYWDDAAGIRRLMSNRGVKKNPGFSWM 624
           K+ EL P ++  Y++++N+      W+    +R+ +  RG++KNPG SW+
Sbjct: 694 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 742

BLAST of Carg03334 vs. ExPASy TrEMBL
Match: A0A6J1FYL3 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111448803 PE=4 SV=1)

HSP 1 Score: 1247.6 bits (3227), Expect = 0.0e+00
Identity = 606/623 (97.27%), Postives = 613/623 (98.39%), Query Frame = 0

Query: 1   MYCSTRPLRSAAHFLKTSWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD 60
           MYCSTRPLRSAAHFLK SWKSNHVSFRALISC+HKDYEDD IQPSLQNVSQNQNLS+NVD
Sbjct: 1   MYCSTRPLRSAAHFLKASWKSNHVSFRALISCSHKDYEDDFIQPSLQNVSQNQNLSENVD 60

Query: 61  IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDM 120
           IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLG+QVHSAIVKLGFSLNPYISSALVDM
Sbjct: 61  IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120

Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSL 180
           YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYL AGC LMAITWFLEMLKQGIEPTPFSL
Sbjct: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITWFLEMLKQGIEPTPFSL 180

Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
           SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240

Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300
           KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSS SCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300

Query: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360
           HCRVIAQGFES+ YIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAV+AGFSNLGI
Sbjct: 301 HCRVIAQGFESHNYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVLAGFSNLGI 360

Query: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
           GEEALECFIQMRREN+DVDFFTFTS+FRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG
Sbjct: 361 GEEALECFIQMRRENVDVDFFTFTSIFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420

Query: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
           LVSMYARCGAI DSKKVFS MNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD
Sbjct: 421 LVSMYARCGAIRDSKKVFSRMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480

Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI 540
           DTSFLAVLTACSHVGLLDKGLEYFNLMRNRL EPPKLEHY TVVDLFGRAGNLHEAEAFI
Sbjct: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 540

Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
           ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD
Sbjct: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600

Query: 601 DAAGIRRLMSNRGVKKNPGFSWM 624
           DAAGIRRLMSNRGVKKNPGFSWM
Sbjct: 601 DAAGIRRLMSNRGVKKNPGFSWM 623

BLAST of Carg03334 vs. ExPASy TrEMBL
Match: A0A6J1J8K5 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111484444 PE=4 SV=1)

HSP 1 Score: 1228.0 bits (3176), Expect = 0.0e+00
Identity = 598/623 (95.99%), Postives = 608/623 (97.59%), Query Frame = 0

Query: 1   MYCSTRPLRSAAHFLKTSWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD 60
           MYCSTRPL+SAAHFLK SWKSNHVSFRALISCN+KDYEDDSIQPSLQN+SQ QNLSDNVD
Sbjct: 1   MYCSTRPLQSAAHFLKASWKSNHVSFRALISCNYKDYEDDSIQPSLQNISQKQNLSDNVD 60

Query: 61  IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDM 120
           IQFLVQLLRNGSPPTPHILS+TISAC KSGLLDLG+QVHSAIVKLGFSLNPYISSALVDM
Sbjct: 61  IQFLVQLLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120

Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSL 180
           YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYL AGC LMAIT FLEMLKQGIEPTPFSL
Sbjct: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPFSL 180

Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
           SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240

Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300
           KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSS SCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300

Query: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360
           HCRVI QGFESN YIAATLVTAYSECCSSLEDYRKVCS +TISDQISWNAVIAGFSNLGI
Sbjct: 301 HCRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNLGI 360

Query: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
           GEEALE FIQMRRENIDVDFFTFTS+FRAIGIGSALEEG+QIHGLVYKTGYGLNLFVQNG
Sbjct: 361 GEEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQNG 420

Query: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
           LVSMYARCGAISDSKKVFS MN+HDLISWNSLLSGCAYHGCGEEVID+FEQMRRTSVKPD
Sbjct: 421 LVSMYARCGAISDSKKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRTSVKPD 480

Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI 540
           DTSFLAVLTACSHVGLLDKGLEYFNLMRNRL EPPKLEHY TVVDLFGRAGNLHEAEAFI
Sbjct: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 540

Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
           ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD
Sbjct: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600

Query: 601 DAAGIRRLMSNRGVKKNPGFSWM 624
           DAA IRRLMSNRGVKKNPGFSWM
Sbjct: 601 DAARIRRLMSNRGVKKNPGFSWM 623

BLAST of Carg03334 vs. ExPASy TrEMBL
Match: A0A5A7V802 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00240 PE=4 SV=1)

HSP 1 Score: 1039.6 bits (2687), Expect = 5.1e-300
Identity = 516/626 (82.43%), Postives = 555/626 (88.66%), Query Frame = 0

Query: 1   MYCSTRPLRSAAHFLKTS--WKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDN 60
           MYCS R L SA H LK S    SNH   R LISC++   EDDSI+P LQ         + 
Sbjct: 1   MYCSIRLLHSAVHLLKPSSTLNSNH---RPLISCHYTHSEDDSIKPLLQT-------HNV 60

Query: 61  VDIQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALV 120
           VD+QFLVQLLRNGSPPTP IL+KTIS C KS LLD G+QVHSAI+KLGFSLNPYI +ALV
Sbjct: 61  VDLQFLVQLLRNGSPPTPPILTKTISICTKSTLLDFGIQVHSAIIKLGFSLNPYIFTALV 120

Query: 121 DMYGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPF 180
           DMYGKCWS+S+A KVF+EM  P+VV+WNSLVTGYL AG  LMA++ FLEMLK+GIEPTPF
Sbjct: 121 DMYGKCWSISDAHKVFEEMSRPSVVSWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPF 180

Query: 181 SLSGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIM 240
           SLSGVLV CSQLQ G+LG+QLH +SLKLRFSSNVVVGTGLID+YSKCCNL+DSRRVFDIM
Sbjct: 181 SLSGVLVACSQLQKGELGSQLHAMSLKLRFSSNVVVGTGLIDVYSKCCNLDDSRRVFDIM 240

Query: 241 SDKNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCK 300
            +KNVFTWTSMI+GYARNQ PHEAM+LMREMLHLDLKPN MTYNSLL+S SCP HFDQCK
Sbjct: 241 QNKNVFTWTSMISGYARNQLPHEAMILMREMLHLDLKPNGMTYNSLLNSFSCPRHFDQCK 300

Query: 301 QIHCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNL 360
           QIHCR+IA+GFESN YIAATLVTAYSEC SSLEDYRK+CSNI +SDQISWNAVIAGF+NL
Sbjct: 301 QIHCRIIAEGFESNNYIAATLVTAYSECSSSLEDYRKLCSNIRMSDQISWNAVIAGFTNL 360

Query: 361 GIGEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQ 420
           GIGEEALECFIQMRREN DVDFFTFTS+F+AIGI SALEEGKQIHGLVYKTGY LNL VQ
Sbjct: 361 GIGEEALECFIQMRRENFDVDFFTFTSIFKAIGITSALEEGKQIHGLVYKTGYALNLSVQ 420

Query: 421 NGLVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVK 480
           NGLVSMYARCGAI DSKKVFS MNEHDLISWNSLLSGCAYHGCGEE IDLFE+MRRT +K
Sbjct: 421 NGLVSMYARCGAIRDSKKVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIK 480

Query: 481 PDDTSFLAVLTACSHVGLLDKGLEYFNLMRN-RLFEPPKLEHYTTVVDLFGRAGNLHEAE 540
           PD+TSFLAVLTACSHVGLLDKGLEYF LMRN  L EPPKLEHY TVVDLFGRAG L EAE
Sbjct: 481 PDNTSFLAVLTACSHVGLLDKGLEYFKLMRNSELIEPPKLEHYATVVDLFGRAGKLREAE 540

Query: 541 AFIENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDG 600
           AFIE+IPIEPGISIYKALLSACL+HGNKDIAIRTAKKLLELYP+D ATYIMLSN LGRDG
Sbjct: 541 AFIESIPIEPGISIYKALLSACLIHGNKDIAIRTAKKLLELYPYDPATYIMLSNALGRDG 600

Query: 601 YWDDAAGIRRLMSNRGVKKNPGFSWM 624
           YWDDAA IRRLMSNRGVKK PGFSWM
Sbjct: 601 YWDDAARIRRLMSNRGVKKEPGFSWM 616

BLAST of Carg03334 vs. ExPASy TrEMBL
Match: A0A1S3CKQ6 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502059 PE=4 SV=1)

HSP 1 Score: 1039.6 bits (2687), Expect = 5.1e-300
Identity = 516/626 (82.43%), Postives = 555/626 (88.66%), Query Frame = 0

Query: 1   MYCSTRPLRSAAHFLKTS--WKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDN 60
           MYCS R L SA H LK S    SNH   R LISC++   EDDSI+P LQ         + 
Sbjct: 1   MYCSIRLLHSAVHLLKPSSTLNSNH---RPLISCHYTHSEDDSIKPLLQT-------HNV 60

Query: 61  VDIQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALV 120
           VD+QFLVQLLRNGSPPTP IL+KTIS C KS LLD G+QVHSAI+KLGFSLNPYI +ALV
Sbjct: 61  VDLQFLVQLLRNGSPPTPPILTKTISICTKSTLLDFGIQVHSAIIKLGFSLNPYIFTALV 120

Query: 121 DMYGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPF 180
           DMYGKCWS+S+A KVF+EM  P+VV+WNSLVTGYL AG  LMA++ FLEMLK+GIEPTPF
Sbjct: 121 DMYGKCWSISDAHKVFEEMSRPSVVSWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPF 180

Query: 181 SLSGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIM 240
           SLSGVLV CSQLQ G+LG+QLH +SLKLRFSSNVVVGTGLID+YSKCCNL+DSRRVFDIM
Sbjct: 181 SLSGVLVACSQLQKGELGSQLHAMSLKLRFSSNVVVGTGLIDVYSKCCNLDDSRRVFDIM 240

Query: 241 SDKNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCK 300
            +KNVFTWTSMI+GYARNQ PHEAM+LMREMLHLDLKPN MTYNSLL+S SCP HFDQCK
Sbjct: 241 QNKNVFTWTSMISGYARNQLPHEAMILMREMLHLDLKPNGMTYNSLLNSFSCPRHFDQCK 300

Query: 301 QIHCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNL 360
           QIHCR+IA+GFESN YIAATLVTAYSEC SSLEDYRK+CSNI +SDQISWNAVIAGF+NL
Sbjct: 301 QIHCRIIAEGFESNNYIAATLVTAYSECSSSLEDYRKLCSNIRMSDQISWNAVIAGFTNL 360

Query: 361 GIGEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQ 420
           GIGEEALECFIQMRREN DVDFFTFTS+F+AIGI SALEEGKQIHGLVYKTGY LNL VQ
Sbjct: 361 GIGEEALECFIQMRRENFDVDFFTFTSIFKAIGITSALEEGKQIHGLVYKTGYALNLSVQ 420

Query: 421 NGLVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVK 480
           NGLVSMYARCGAI DSKKVFS MNEHDLISWNSLLSGCAYHGCGEE IDLFE+MRRT +K
Sbjct: 421 NGLVSMYARCGAIRDSKKVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIK 480

Query: 481 PDDTSFLAVLTACSHVGLLDKGLEYFNLMRN-RLFEPPKLEHYTTVVDLFGRAGNLHEAE 540
           PD+TSFLAVLTACSHVGLLDKGLEYF LMRN  L EPPKLEHY TVVDLFGRAG L EAE
Sbjct: 481 PDNTSFLAVLTACSHVGLLDKGLEYFKLMRNSELIEPPKLEHYATVVDLFGRAGKLREAE 540

Query: 541 AFIENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDG 600
           AFIE+IPIEPGISIYKALLSACL+HGNKDIAIRTAKKLLELYP+D ATYIMLSN LGRDG
Sbjct: 541 AFIESIPIEPGISIYKALLSACLIHGNKDIAIRTAKKLLELYPYDPATYIMLSNALGRDG 600

Query: 601 YWDDAAGIRRLMSNRGVKKNPGFSWM 624
           YWDDAA IRRLMSNRGVKK PGFSWM
Sbjct: 601 YWDDAARIRRLMSNRGVKKEPGFSWM 616

BLAST of Carg03334 vs. ExPASy TrEMBL
Match: A0A6J1D410 (putative pentatricopeptide repeat-containing protein At3g23330 OS=Momordica charantia OX=3673 GN=LOC111017068 PE=4 SV=1)

HSP 1 Score: 1038.5 bits (2684), Expect = 1.1e-299
Identity = 521/623 (83.63%), Postives = 557/623 (89.41%), Query Frame = 0

Query: 3   CSTRPLRSAAHFLKTS-WKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVDI 62
           CSTR LRSA H LK S W  +HVSFRA IS NH   E     PSL++V+Q  NLSDN DI
Sbjct: 5   CSTRRLRSAVHLLKASFWIPSHVSFRASISRNHTHSE-----PSLRHVTQKHNLSDNFDI 64

Query: 63  QFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDMY 122
           + L+QLLRN S PTPH+LSKTISAC KSG LDLG+QVHSAIVKLGFSLN YISSALVDMY
Sbjct: 65  ELLLQLLRNASSPTPHLLSKTISACTKSGYLDLGIQVHSAIVKLGFSLNAYISSALVDMY 124

Query: 123 GKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSLS 182
           GK  SMSNAQKVFDEM+CPNVV+WN+LVT YL AG   MAIT FLEML  GIEPTPFSLS
Sbjct: 125 GKYCSMSNAQKVFDEMECPNVVSWNALVTCYLQAGRPEMAITLFLEMLNVGIEPTPFSLS 184

Query: 183 GVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSDK 242
           GVLVGCSQLQ GKLG+QLH  SLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVF+IMS++
Sbjct: 185 GVLVGCSQLQDGKLGSQLHCFSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFNIMSNR 244

Query: 243 NVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQIH 302
           NVFTWTSMI+GYARNQ+P EAMVL+R ML LDLKPNYMTYNSLLSS S  H+F QCKQIH
Sbjct: 245 NVFTWTSMISGYARNQKPDEAMVLVRAMLRLDLKPNYMTYNSLLSSFSSSHNFHQCKQIH 304

Query: 303 CRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGIG 362
           CR+IA+GFESN YIAA+LVTAYSECCSSLEDYRKVCS IT+ DQISWNAVIAGFSNLGIG
Sbjct: 305 CRIIAEGFESNNYIAASLVTAYSECCSSLEDYRKVCSAITMFDQISWNAVIAGFSNLGIG 364

Query: 363 EEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNGL 422
           EEALECFIQMR+ NIDVDFFTFTS+FRAIGI SALEEG+QIHGLVYKTG+ LNLFVQNGL
Sbjct: 365 EEALECFIQMRQANIDVDFFTFTSIFRAIGITSALEEGRQIHGLVYKTGFALNLFVQNGL 424

Query: 423 VSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPDD 482
           VSMYARCGAISDSKKVFS MNEHDLISWNSLLSGCAYHG GEE IDLFEQMRRTSVKPD+
Sbjct: 425 VSMYARCGAISDSKKVFSMMNEHDLISWNSLLSGCAYHGRGEEAIDLFEQMRRTSVKPDN 484

Query: 483 TSFLAVLTACSHVGLLDKGLEYFNLMRN-RLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI 542
           TSFL+VLTACSHVGLLDKGLEYFNLM N  L EPPKLEHY TVVDLFGRAGNLHEAEAFI
Sbjct: 485 TSFLSVLTACSHVGLLDKGLEYFNLMINSNLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 544

Query: 543 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 602
           E+I +EPG SIYK+LLSACL+HGNKDIAIRTAKK+L+LYPHD ATYIMLSNVL RDG WD
Sbjct: 545 ESITVEPGPSIYKSLLSACLIHGNKDIAIRTAKKILQLYPHDPATYIMLSNVLVRDGNWD 604

Query: 603 DAAGIRRLMSNRGVKKNPGFSWM 624
           DAA +RRLMSNRGVKKNPGFSWM
Sbjct: 605 DAARVRRLMSNRGVKKNPGFSWM 622

BLAST of Carg03334 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 391.7 bits (1005), Expect = 1.1e-108
Identity = 189/561 (33.69%), Postives = 328/561 (58.47%), Query Frame = 0

Query: 61  IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDM 120
           +QF V++  +   P  +  +  +  C     L +G ++H  +VK GFSL+ +  + L +M
Sbjct: 120 LQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM 179

Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSL 180
           Y KC  ++ A+KVFD M   ++V+WN++V GY   G + MA+     M ++ ++P+  ++
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITI 239

Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
             VL   S L+   +G ++HG +++  F S V + T L+DMY+KC +LE +R++FD M +
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLE 299

Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300
           +NV +W SMI  Y +N+ P EAM++ ++ML   +KP  ++    L + +     ++ + I
Sbjct: 300 RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359

Query: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360
           H   +  G + N  +  +L++ Y + C  ++    +   +     +SWNA+I GF+  G 
Sbjct: 360 HKLSVELGLDRNVSVVNSLISMYCK-CKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 419

Query: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
             +AL  F QMR   +  D FT+ S+  AI   S     K IHG+V ++    N+FV   
Sbjct: 420 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 479

Query: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
           LV MYA+CGAI  ++ +F  M+E  + +WN+++ G   HG G+  ++LFE+M++ ++KP+
Sbjct: 480 LVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPN 539

Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI 540
             +FL+V++ACSH GL++ GL+ F +M+        ++HY  +VDL GRAG L+EA  FI
Sbjct: 540 GVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFI 599

Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
             +P++P +++Y A+L AC +H N + A + A++L EL P D   +++L+N+      W+
Sbjct: 600 MQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWE 659

Query: 601 DAAGIRRLMSNRGVKKNPGFS 622
               +R  M  +G++K PG S
Sbjct: 660 KVGQVRVSMLRQGLRKTPGCS 679

BLAST of Carg03334 vs. TAIR 10
Match: AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 391.7 bits (1005), Expect = 1.1e-108
Identity = 203/554 (36.64%), Postives = 313/554 (56.50%), Query Frame = 0

Query: 70  NGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDMYGKCWSMSN 129
           +G  P  + L+  + AC+  G L  G Q+H+   KLGF+ N  I  AL+++Y KC  +  
Sbjct: 383 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442

Query: 130 AQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSLSGVLVGCSQ 189
           A   F E +  NVV WN ++  Y        +   F +M  + I P  ++   +L  C +
Sbjct: 443 ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 502

Query: 190 LQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSDKNVFTWTSM 249
           L   +LG Q+H   +K  F  N  V + LIDMY+K   L+ +  +    + K+V +WT+M
Sbjct: 503 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTM 562

Query: 250 ITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQIHCRVIAQGF 309
           I GY +     +A+   R+ML   ++ + +   + +S+ +      + +QIH +    GF
Sbjct: 563 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF 622

Query: 310 ESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGIGEEALECFI 369
            S+      LVT YS  C  +E+           D I+WNA+++GF   G  EEAL  F+
Sbjct: 623 SSDLPFQNALVTLYSR-CGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFV 682

Query: 370 QMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNGLVSMYARCG 429
           +M RE ID + FTF S  +A    + +++GKQ+H ++ KTGY     V N L+SMYA+CG
Sbjct: 683 RMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCG 742

Query: 430 AISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPDDTSFLAVLT 489
           +ISD++K F  ++  + +SWN++++  + HG G E +D F+QM  ++V+P+  + + VL+
Sbjct: 743 SISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLS 802

Query: 490 ACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFIENIPIEPGI 549
           ACSH+GL+DKG+ YF  M +     PK EHY  VVD+  RAG L  A+ FI+ +PI+P  
Sbjct: 803 ACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDA 862

Query: 550 SIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWDDAAGIRRLM 609
            +++ LLSAC+VH N +I    A  LLEL P DSATY++LSN+      WD     R+ M
Sbjct: 863 LVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKM 922

Query: 610 SNRGVKKNPGFSWM 624
             +GVKK PG SW+
Sbjct: 923 KEKGVKKEPGQSWI 935

BLAST of Carg03334 vs. TAIR 10
Match: AT4G39530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 377.1 bits (967), Expect = 2.7e-104
Identity = 193/568 (33.98%), Postives = 318/568 (55.99%), Query Frame = 0

Query: 59  VDIQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALV 118
           V +Q   QL+ +   P  +ILS  +SAC+    L+ G Q+H+ I++ G  ++  + + L+
Sbjct: 232 VSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLI 291

Query: 119 DMYGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPF 178
           D Y KC  +  A K+F+ M   N+++W +L++GY        A+  F  M K G++P  +
Sbjct: 292 DSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMY 351

Query: 179 SLSGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIM 238
           + S +L  C+ L A   GTQ+H  ++K    ++  V   LIDMY+KC  L D+R+VFDI 
Sbjct: 352 ACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF 411

Query: 239 SDKNVFTWTSMITGYAR---NQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFD 298
           +  +V  + +MI GY+R     + HEA+ + R+M    ++P+ +T+ SLL + +      
Sbjct: 412 AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLG 471

Query: 299 QCKQIHCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGF 358
             KQIH  +   G   + +  + L+  YS  C  L+D R V   + + D + WN++ AG+
Sbjct: 472 LSKQIHGLMFKYGLNLDIFAGSALIDVYSN-CYCLKDSRLVFDEMKVKDLVIWNSMFAGY 531

Query: 359 SNLGIGEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNL 418
                 EEAL  F++++      D FTF +M  A G  ++++ G++ H  + K G   N 
Sbjct: 532 VQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNP 591

Query: 419 FVQNGLVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRT 478
           ++ N L+ MYA+CG+  D+ K F +    D++ WNS++S  A HG G++ + + E+M   
Sbjct: 592 YITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSE 651

Query: 479 SVKPDDTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHE 538
            ++P+  +F+ VL+ACSH GL++ GL+ F LM  R    P+ EHY  +V L GRAG L++
Sbjct: 652 GIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNK 711

Query: 539 AEAFIENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGR 598
           A   IE +P +P   ++++LLS C   GN ++A   A+  +   P DS ++ MLSN+   
Sbjct: 712 ARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYAS 771

Query: 599 DGYWDDAAGIRRLMSNRGVKKNPGFSWM 624
            G W +A  +R  M   GV K PG SW+
Sbjct: 772 KGMWTEAKKVRERMKVEGVVKEPGRSWI 797

BLAST of Carg03334 vs. TAIR 10
Match: AT3G15130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 370.2 bits (949), Expect = 3.4e-102
Identity = 198/549 (36.07%), Postives = 308/549 (56.10%), Query Frame = 0

Query: 79  LSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDMYGKCWSMSNAQKVFDEMQ 138
           L   +  C + GL D G QVH  ++K G  LN   S+ L+DMY KC     A KVFD M 
Sbjct: 9   LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68

Query: 139 CPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSLSGVLVGCSQLQAGKLGTQ 198
             NVV+W++L++G++  G    +++ F EM +QGI P  F+ S  L  C  L A + G Q
Sbjct: 69  ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128

Query: 199 LHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSDKNVFTWTSMITGYARNQQ 258
           +HG  LK+ F   V VG  L+DMYSKC  + ++ +VF  + D+++ +W +MI G+     
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188

Query: 259 PHEAMVLMREMLHLDLK--PNYMTYNSLLSSLSCPHHFDQCKQIHCRVIAQGFE--SNKY 318
             +A+     M   ++K  P+  T  SLL + S        KQIH  ++  GF   S+  
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248

Query: 319 IAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGIGEEALECFIQMRRE 378
           I  +LV  Y + C  L   RK    I     ISW+++I G++  G   EA+  F +++  
Sbjct: 249 ITGSLVDLYVK-CGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 308

Query: 379 NIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNGLVSMYARCGAISDS 438
           N  +D F  +S+       + L +GKQ+  L  K   GL   V N +V MY +CG + ++
Sbjct: 309 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEA 368

Query: 439 KKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPDDTSFLAVLTACSHV 498
           +K F+ M   D+ISW  +++G   HG G++ + +F +M R +++PD+  +LAVL+ACSH 
Sbjct: 369 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 428

Query: 499 GLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFIENIPIEPGISIYKA 558
           G++ +G E F+ +       P++EHY  VVDL GRAG L EA+  I+ +PI+P + I++ 
Sbjct: 429 GMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQT 488

Query: 559 LLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWDDAAGIRRLMSNRGV 618
           LLS C VHG+ ++     K LL +   + A Y+M+SN+ G+ GYW++    R L + +G+
Sbjct: 489 LLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGL 548

Query: 619 KKNPGFSWM 624
           KK  G SW+
Sbjct: 549 KKEAGMSWV 556

BLAST of Carg03334 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 366.7 bits (940), Expect = 3.7e-101
Identity = 185/530 (34.91%), Postives = 306/530 (57.74%), Query Frame = 0

Query: 95  GMQVHSAIVKLGFSLNPYISSALVDMYGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLH 154
           G Q+H  I+K GF     + ++LV  Y K   + +A+KVFDEM   +V++WNS++ GY+ 
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273

Query: 155 AGCSLMAITWFLEMLKQGIEPTPFSLSGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVV 214
            G +   ++ F++ML  GIE    ++  V  GC+  +   LG  +H + +K  FS     
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333

Query: 215 GTGLIDMYSKCCNLEDSRRVFDIMSDKNVFTWTSMITGYARNQQPHEAMVLMREMLHLDL 274
              L+DMYSKC +L+ ++ VF  MSD++V ++TSMI GYAR     EA+ L  EM    +
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393

Query: 275 KPNYMTYNSLLSSLSCPHHFDQCKQIHCRVIAQGFESNKYIAATLVTAYSECCSSLEDYR 334
            P+  T  ++L+  +     D+ K++H  +       + +++  L+  Y++ C S+++  
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAK-CGSMQEAE 453

Query: 335 KVCSNITISDQISWNAVIAGFSNLGIGEEALECF-IQMRRENIDVDFFTFTSMFRAIGIG 394
            V S + + D ISWN +I G+S      EAL  F + +  +    D  T   +  A    
Sbjct: 454 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 513

Query: 395 SALEEGKQIHGLVYKTGYGLNLFVQNGLVSMYARCGAISDSKKVFSTMNEHDLISWNSLL 454
           SA ++G++IHG + + GY  +  V N LV MYA+CGA+  +  +F  +   DL+SW  ++
Sbjct: 514 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 573

Query: 455 SGCAYHGCGEEVIDLFEQMRRTSVKPDDTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFE 514
           +G   HG G+E I LF QMR+  ++ D+ SF+++L ACSH GL+D+G  +FN+MR+    
Sbjct: 574 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 633

Query: 515 PPKLEHYTTVVDLFGRAGNLHEAEAFIENIPIEPGISIYKALLSACLVHGNKDIAIRTAK 574
            P +EHY  +VD+  R G+L +A  FIEN+PI P  +I+ ALL  C +H +  +A + A+
Sbjct: 634 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 693

Query: 575 KLLELYPHDSATYIMLSNVLGRDGYWDDAAGIRRLMSNRGVKKNPGFSWM 624
           K+ EL P ++  Y++++N+      W+    +R+ +  RG++KNPG SW+
Sbjct: 694 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 742

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7010533.10.0e+00100.00Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
KAG6570686.10.0e+0099.20Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
XP_022944325.10.0e+0097.27pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucur... [more]
XP_023512803.10.0e+0096.95pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucur... [more]
XP_022986802.10.0e+0095.99pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucur... [more]
Match NameE-valueIdentityDescription
Q9SVP71.5e-10736.64Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX... [more]
Q3E6Q11.5e-10733.69Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
Q9SVA53.9e-10333.98Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana OX... [more]
P0C8984.7e-10136.07Putative pentatricopeptide repeat-containing protein At3g15130 OS=Arabidopsis th... [more]
Q9SN395.2e-10034.91Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
Match NameE-valueIdentityDescription
A0A6J1FYL30.0e+0097.27pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cuc... [more]
A0A6J1J8K50.0e+0095.99pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cuc... [more]
A0A5A7V8025.1e-30082.43Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3CKQ65.1e-30082.43pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Cucumis ... [more]
A0A6J1D4101.1e-29983.63putative pentatricopeptide repeat-containing protein At3g23330 OS=Momordica char... [more]
Match NameE-valueIdentityDescription
AT1G11290.11.1e-10833.69Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G13650.11.1e-10836.64Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G39530.12.7e-10433.98Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G15130.13.4e-10236.07Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G18750.13.7e-10134.91Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 115..138
e-value: 0.1
score: 12.9
coord: 519..540
e-value: 0.23
score: 11.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 445..492
e-value: 1.5E-8
score: 34.7
coord: 140..187
e-value: 1.2E-9
score: 38.2
coord: 344..389
e-value: 1.1E-8
score: 35.1
coord: 241..288
e-value: 4.2E-11
score: 42.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 244..277
e-value: 7.6E-7
score: 26.9
coord: 346..379
e-value: 2.4E-4
score: 19.1
coord: 143..176
e-value: 2.3E-6
score: 25.4
coord: 447..480
e-value: 1.9E-7
score: 28.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 344..378
score: 9.996763
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 480..514
score: 8.79102
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 582..616
score: 8.714292
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 141..175
score: 11.070971
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 242..276
score: 11.794416
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 445..479
score: 11.73961
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 293..401
e-value: 2.7E-10
score: 41.9
coord: 200..292
e-value: 1.9E-21
score: 78.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 419..622
e-value: 7.8E-37
score: 129.3
coord: 40..199
e-value: 2.0E-26
score: 95.1
NoneNo IPR availablePANTHERPTHR47925OS01G0913400 PROTEIN-RELATEDcoord: 49..623
NoneNo IPR availablePANTHERPTHR47925:SF24SUBFAMILY NOT NAMEDcoord: 49..623

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg03334-RACarg03334-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding