Carg03327 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03327
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	MPP6 domain-containing protein
Location	Carg_Chr20: 1935452 .. 1938112 (+)
RNA-Seq Expression	Carg03327
Synteny	Carg03327

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAGCGCGAGCTTTCCAATACATTAAGGAACTTGAAGGTAAACTAAGCTTCAGATTTTTTTTTTTTTTTTTTTTTTCAGATTTACTGCCTTATCATGCTTCATTAGTGTTTCAACTTTCTGGTTGTTGGTTAATTGGTCTAGGGAACTGCCAAATTATGTTTGAGATTTCTTTATTTTGATTCTGTTCTTGCTTTGTGCTTATGAGGAACCGATTTAAATTGTTATGCGAGTTATTGATTTTTTGTTTTGCCATTAGTTCATGCAAAGGGCGGGTCAGAGAGAGGAGCAACCTAAGAAAGAGGAAGAAGTAAAGCCTGATGAGAATTTCTTTCCTTCGAGTACTATAATTAGAAAGTGGTAGGCTGTTGGTCTTTTCAATGGTTTGTTTGTTACTTTTGATTTATGGTTGTTTCACTACCTTTTCTAGTTGTTCATGATCTTTTCTCTTTTCTTTTCTTTTTTCGTTTTTCATGATGCAACAAACTGTACACAATTCTACCGCATTGTTCTGCGTGAGCAGTTTATTTCCTGAAAACGGACAATACATTTGAAATATTGATGGATTATGTGCTTTTGGCGTTCCTTGTTTATCTTTATCATTATTGCTAGAGTTTTTCACTCTGAATGTGACAGATAGAAATATACATGCCTGCGATGGAAGTAATTCCATACAGTATAAATTTTATTCGTGCCTGTCTTGCTACAGAAAGTCTAGGATAGAATGAGAACCTTTTGTAACTGCTTCTAGTGTGACATCTTTACGCATCAAGCCAATCTCTGCTTTTGGCCGTGATAGTCGCTTTATGTCAACTTAGCTCTTTGATATCTTTTTTCAAGAAACTGATTTTTTTTTTTTTTTCTTCCATGTTGTAGTGTAGTTTTAGTTGAAGGAGATCCTCATCCAGGCGCTTTTAAAGGTCGAATGTCATTTCAAAGCTTTAATCCTTCAATTGATGTGAGTATATATTTTCAGTGTCCTAAAGTTTATCTGTGGACTATAGCCCTTTGTGTTTTGCATGGCTTTCGTCTCACATCAAAGCTTTGCCATTATAGAGACTCAATGAAGAAGTAGCTAGCTTAGGCCAGCATGAAATTCCTGGCTCTTCATCTGGAAATCACAGTGGAAACCTTTCATCAAGGTTAGTGGTTATAATTTCACCTGTTTCGCTCTTTCTTTTGGAAAATTACAGCTGCCTTTATGATGTTTTATTAAACTACTTTTCTAGGATGTGTTATCAAACTACTTTTCTAGGATGTTTTATTAAACTGCTGTTCTTGCTAAGCATCAATTTTTCCTAAATGAAGCTAGCATTCTGTGTCTCACTGTCTTGCAACAACATAGTGGTTTCTACAAATTTAGTTGTAATCAGCATCTGCATTTAGGTATGTATTAGGAGTAAAGTTTGTGAGAATCCCTTTTTGTATAACAAGTAAAATATGAATAACATCAACAAAATTGTTGCCTTAAATCGAGTAATGGAGCATTTTTTTTATAAAGAAAAATCAAACTTTTATTGAGAAAAAAAAATGTAATGGAGCTTTATGTTGTATATTTCTCTTTTCCCCCCCTTGTGGGGGTGGGGGTGGGGGTTTGAAATAGAACATTCATTCCCACAGAAAGTCACTTGAAAGTAGTTATCATTCTTTTTTTTTTTTTTTTTTTTTCCCTTTTACCCTTTCATCTTCAGACAAAAATTTTTGTTCCCCAGAGATAATGGATCTTCACAAAATGAAGCCTCGTGCTCAAACATTGATGAAAAAAATTGTGAGGCTAATGAGGATCTTAAAAGGAAACAATCTGAAGTAGTTTCTGATGGACGGCATCCAACTAAGTTTCCAAGAAGTGGTCGGGACAACCAGCAATCATCATTTAGTCATGGTAAAGGACCTTCCAAAAAACCAAAGGGTGAAAAGCTGGACTGGAATGTTCTTAGGCCCTCCAAGACTCCCAATAAGAGTGGATAACCTTGTGTAGGAGAGTCCTTAGATGGGTGGAGAATCCAGTTCCTATGCTCTTTGTATTGATTTCTTGCCATATTTTGTAGTTATATAGGACTGTTCAGAGTTCCGTGATCAATTTATTGGATGCGTCATTTAACGTCTCTTATCTAAAACAAATTAGATGTTACACATGTACCACCTCATTCCAGTTCCTTAATTCATACATTCCTGTACTCTGATCAAGAACGAAGCTCAATGCTTGGAATATTGTCTGTTTTTGTAAGAAACTAGATATCTGGAGGATTCTTTTGTATTGCAAATGGAAAATAGATTCTACAAACTTATTTTGTAGCATTCAATAAGAGTGGAGCTTTCATGGTAATGGTAATTTTACAGAGGGAGCAGAATTCATTTCACTTCTTTTTTAGGTTCCTGTGCTGAAGGATTTGAGGGCGTTTTAGTTCTCTGTTTCATCTATGTTTGGTTTACGTACCGTTGGTCTACGATCTGTTGATTTGGACTGTCACTGTCATTAGATCCACCCAAACCATCTAGGATATAATCAATGCTTTGATCCAAGTAAAACAAACAAAACTGGATAATCTTAATGTGTTCAGTGTGTTCAAATCTTAAATTTGAAACTTTAGAAGGGCATAAATAAAGAAAAAAGAGAAGTTAATCCTGAGATGGTCCATATCCATAAAAACATAAATG

mRNA sequence

ATGGCGAAGCGCGAGCTTTCCAATACATTAAGGAACTTGAAGTTCATGCAAAGGGCGGGTCAGAGAGAGGAGCAACCTAAGAAAGAGGAAGAAGTAAAGCCTGATGAGAATTTCTTTCCTTCGAGTACTATAATTAGAAAGTGTGTAGTTTTAGTTGAAGGAGATCCTCATCCAGGCGCTTTTAAAGGTCGAATGTCATTTCAAAGCTTTAATCCTTCAATTGATAGACTCAATGAAGAAGTAGCTAGCTTAGGCCAGCATGAAATTCCTGGCTCTTCATCTGGAAATCACAGTGGAAACCTTTCATCAAGAGATAATGGATCTTCACAAAATGAAGCCTCGTGCTCAAACATTGATGAAAAAAATTGTGAGGCTAATGAGGATCTTAAAAGGAAACAATCTGAAGTAGTTTCTGATGGACGGCATCCAACTAAGTTTCCAAGAAGTGGTCGGGACAACCAGCAATCATCATTTAGTCATGGTAAAGGACCTTCCAAAAAACCAAAGGGTGAAAAGCTGGACTGGAATGTTCTTAGGCCCTCCAAGACTCCCAATAAGAGTGGATAACCTTGTGTAGGAGAGTCCTTAGATGGGTGGAGAATCCAGTTCCTATGCTCTTTGTATTGATTTCTTGCCATATTTTGTAGTTATATAGGACTGTTCAGAGTTCCGTGATCAATTTATTGGATGCGTCATTTAACGTCTCTTATCTAAAACAAATTAGATGTTACACATGTACCACCTCATTCCAGTTCCTTAATTCATACATTCCTGTACTCTGATCAAGAACGAAGCTCAATGCTTGGAATATTGTCTGTTTTTGTAAGAAACTAGATATCTGGAGGATTCTTTTGTATTGCAAATGGAAAATAGATTCTACAAACTTATTTTGTAGCATTCAATAAGAGTGGAGCTTTCATGGTAATGGTAATTTTACAGAGGGAGCAGAATTCATTTCACTTCTTTTTTAGGTTCCTGTGCTGAAGGATTTGAGGGCGTTTTAGTTCTCTGTTTCATCTATGTTTGGTTTACGTACCGTTGGTCTACGATCTGTTGATTTGGACTGTCACTGTCATTAGATCCACCCAAACCATCTAGGATATAATCAATGCTTTGATCCAAGTAAAACAAACAAAACTGGATAATCTTAATGTGTTCAGTGTGTTCAAATCTTAAATTTGAAACTTTAGAAGGGCATAAATAAAGAAAAAAGAGAAGTTAATCCTGAGATGGTCCATATCCATAAAAACATAAATG

Coding sequence (CDS)

ATGGCGAAGCGCGAGCTTTCCAATACATTAAGGAACTTGAAGTTCATGCAAAGGGCGGGTCAGAGAGAGGAGCAACCTAAGAAAGAGGAAGAAGTAAAGCCTGATGAGAATTTCTTTCCTTCGAGTACTATAATTAGAAAGTGTGTAGTTTTAGTTGAAGGAGATCCTCATCCAGGCGCTTTTAAAGGTCGAATGTCATTTCAAAGCTTTAATCCTTCAATTGATAGACTCAATGAAGAAGTAGCTAGCTTAGGCCAGCATGAAATTCCTGGCTCTTCATCTGGAAATCACAGTGGAAACCTTTCATCAAGAGATAATGGATCTTCACAAAATGAAGCCTCGTGCTCAAACATTGATGAAAAAAATTGTGAGGCTAATGAGGATCTTAAAAGGAAACAATCTGAAGTAGTTTCTGATGGACGGCATCCAACTAAGTTTCCAAGAAGTGGTCGGGACAACCAGCAATCATCATTTAGTCATGGTAAAGGACCTTCCAAAAAACCAAAGGGTGAAAAGCTGGACTGGAATGTTCTTAGGCCCTCCAAGACTCCCAATAAGAGTGGATAA

Protein sequence

MAKRELSNTLRNLKFMQRAGQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGAFKGRMSFQSFNPSIDRLNEEVASLGQHEIPGSSSGNHSGNLSSRDNGSSQNEASCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKLDWNVLRPSKTPNKSG

Homology

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BLAST of Carg03327 vs. NCBI nr
Match: KAG6570693.1 (hypothetical protein SDJN03_29608, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010540.1 hypothetical protein SDJN02_27334, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 368.2 bits (944), Expect = 4.1e-98
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MAKRELSNTLRNLKFMQRAGQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60
           MAKRELSNTLRNLKFMQRAGQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA
Sbjct: 1   MAKRELSNTLRNLKFMQRAGQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60

Query: 61  FKGRMSFQSFNPSIDRLNEEVASLGQHEIPGSSSGNHSGNLSSRDNGSSQNEASCSNIDE 120
           FKGRMSFQSFNPSIDRLNEEVASLGQHEIPGSSSGNHSGNLSSRDNGSSQNEASCSNIDE
Sbjct: 61  FKGRMSFQSFNPSIDRLNEEVASLGQHEIPGSSSGNHSGNLSSRDNGSSQNEASCSNIDE 120

Query: 121 KNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKLDWNVLRP 180
           KNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKLDWNVLRP
Sbjct: 121 KNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKLDWNVLRP 180

Query: 181 SKTPNKSG 189
           SKTPNKSG
Sbjct: 181 SKTPNKSG 188

[Close]

BLAST of Carg03327 vs. NCBI nr
Match: XP_022943952.1 (uncharacterized protein LOC111448524 isoform X2 [Cucurbita moschata])

HSP 1 Score: 365.5 bits (937), Expect = 2.7e-97
Identity = 185/188 (98.40%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MAKRELSNTLRNLKFMQRAGQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60
           MAKRELSNTLRNLKFMQRAGQRE+QPK+EEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA
Sbjct: 1   MAKRELSNTLRNLKFMQRAGQREDQPKREEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60

Query: 61  FKGRMSFQSFNPSIDRLNEEVASLGQHEIPGSSSGNHSGNLSSRDNGSSQNEASCSNIDE 120
           FKGRMSFQSFNPSIDRLNEE+ASLGQHEIPGSSSGNHSGNLSSRDNGSSQNEASCSNIDE
Sbjct: 61  FKGRMSFQSFNPSIDRLNEEIASLGQHEIPGSSSGNHSGNLSSRDNGSSQNEASCSNIDE 120

Query: 121 KNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKLDWNVLRP 180
           KNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKLDWNVLRP
Sbjct: 121 KNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKLDWNVLRP 180

Query: 181 SKTPNKSG 189
           SKTPNKSG
Sbjct: 181 SKTPNKSG 188

[Close]

BLAST of Carg03327 vs. NCBI nr
Match: XP_022943951.1 (uncharacterized protein LOC111448524 isoform X1 [Cucurbita moschata])

HSP 1 Score: 358.6 bits (919), Expect = 3.3e-95
Identity = 185/195 (94.87%), Postives = 188/195 (96.41%), Query Frame = 0


Query: 1   MAKRELSNTLRNLKFMQRAGQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60
           MAKRELSNTLRNLKFMQRAGQRE+QPK+EEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA
Sbjct: 1   MAKRELSNTLRNLKFMQRAGQREDQPKREEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60

Query: 61  FKGRMSFQSFNPSIDRLNEEVASLGQHEIPGSSSGNHSGNLSS-------RDNGSSQNEA 120
           FKGRMSFQSFNPSIDRLNEE+ASLGQHEIPGSSSGNHSGNLSS       RDNGSSQNEA
Sbjct: 61  FKGRMSFQSFNPSIDRLNEEIASLGQHEIPGSSSGNHSGNLSSRQKILFPRDNGSSQNEA 120

Query: 121 SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180
           SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL
Sbjct: 121 SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180

Query: 181 DWNVLRPSKTPNKSG 189
           DWNVLRPSKTPNKSG
Sbjct: 181 DWNVLRPSKTPNKSG 195

[Close]

BLAST of Carg03327 vs. NCBI nr
Match: XP_023512013.1 (uncharacterized protein LOC111776852 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.8 bits (917), Expect = 5.6e-95
Identity = 184/188 (97.87%), Postives = 184/188 (97.87%), Query Frame = 0


Query: 1   MAKRELSNTLRNLKFMQRAGQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60
           MAKRELSNTLRNLKFMQRAGQREEQPKKEEEVK DENFFPSSTIIRKCVVLVEG PHPGA
Sbjct: 1   MAKRELSNTLRNLKFMQRAGQREEQPKKEEEVKTDENFFPSSTIIRKCVVLVEGYPHPGA 60

Query: 61  FKGRMSFQSFNPSIDRLNEEVASLGQHEIPGSSSGNHSGNLSSRDNGSSQNEASCSNIDE 120
           FKGRMSFQSFNPSIDRLNEEVASLGQHEIPGSSSGNHSGNLSSRDNGSSQNE  CSNIDE
Sbjct: 61  FKGRMSFQSFNPSIDRLNEEVASLGQHEIPGSSSGNHSGNLSSRDNGSSQNEVLCSNIDE 120

Query: 121 KNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKLDWNVLRP 180
           KNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKLDWNVLRP
Sbjct: 121 KNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKLDWNVLRP 180

Query: 181 SKTPNKSG 189
           SKTPNKSG
Sbjct: 181 SKTPNKSG 188

[Close]

BLAST of Carg03327 vs. NCBI nr
Match: XP_023512011.1 (uncharacterized protein LOC111776852 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350.9 bits (899), Expect = 6.8e-93
Identity = 184/195 (94.36%), Postives = 184/195 (94.36%), Query Frame = 0


Query: 1   MAKRELSNTLRNLKFMQRAGQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60
           MAKRELSNTLRNLKFMQRAGQREEQPKKEEEVK DENFFPSSTIIRKCVVLVEG PHPGA
Sbjct: 1   MAKRELSNTLRNLKFMQRAGQREEQPKKEEEVKTDENFFPSSTIIRKCVVLVEGYPHPGA 60

Query: 61  FKGRMSFQSFNPSIDRLNEEVASLGQHEIPGSSSGNHSGNLSS-------RDNGSSQNEA 120
           FKGRMSFQSFNPSIDRLNEEVASLGQHEIPGSSSGNHSGNLSS       RDNGSSQNE 
Sbjct: 61  FKGRMSFQSFNPSIDRLNEEVASLGQHEIPGSSSGNHSGNLSSRQKFLFPRDNGSSQNEV 120

Query: 121 SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180
            CSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL
Sbjct: 121 LCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180

Query: 181 DWNVLRPSKTPNKSG 189
           DWNVLRPSKTPNKSG
Sbjct: 181 DWNVLRPSKTPNKSG 195

[Close]

BLAST of Carg03327 vs. ExPASy TrEMBL
Match: A0A6J1FUG1 (uncharacterized protein LOC111448524 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448524 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.3e-97
Identity = 185/188 (98.40%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MAKRELSNTLRNLKFMQRAGQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60
           MAKRELSNTLRNLKFMQRAGQRE+QPK+EEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA
Sbjct: 1   MAKRELSNTLRNLKFMQRAGQREDQPKREEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60

Query: 61  FKGRMSFQSFNPSIDRLNEEVASLGQHEIPGSSSGNHSGNLSSRDNGSSQNEASCSNIDE 120
           FKGRMSFQSFNPSIDRLNEE+ASLGQHEIPGSSSGNHSGNLSSRDNGSSQNEASCSNIDE
Sbjct: 61  FKGRMSFQSFNPSIDRLNEEIASLGQHEIPGSSSGNHSGNLSSRDNGSSQNEASCSNIDE 120

Query: 121 KNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKLDWNVLRP 180
           KNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKLDWNVLRP
Sbjct: 121 KNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKLDWNVLRP 180

Query: 181 SKTPNKSG 189
           SKTPNKSG
Sbjct: 181 SKTPNKSG 188

[Close]

BLAST of Carg03327 vs. ExPASy TrEMBL
Match: A0A6J1FT40 (uncharacterized protein LOC111448524 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448524 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.6e-95
Identity = 185/195 (94.87%), Postives = 188/195 (96.41%), Query Frame = 0


Query: 1   MAKRELSNTLRNLKFMQRAGQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60
           MAKRELSNTLRNLKFMQRAGQRE+QPK+EEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA
Sbjct: 1   MAKRELSNTLRNLKFMQRAGQREDQPKREEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60

Query: 61  FKGRMSFQSFNPSIDRLNEEVASLGQHEIPGSSSGNHSGNLSS-------RDNGSSQNEA 120
           FKGRMSFQSFNPSIDRLNEE+ASLGQHEIPGSSSGNHSGNLSS       RDNGSSQNEA
Sbjct: 61  FKGRMSFQSFNPSIDRLNEEIASLGQHEIPGSSSGNHSGNLSSRQKILFPRDNGSSQNEA 120

Query: 121 SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180
           SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL
Sbjct: 121 SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180

Query: 181 DWNVLRPSKTPNKSG 189
           DWNVLRPSKTPNKSG
Sbjct: 181 DWNVLRPSKTPNKSG 195

[Close]

BLAST of Carg03327 vs. ExPASy TrEMBL
Match: A0A6J1JFF6 (uncharacterized protein LOC111484532 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484532 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.8e-91
Identity = 178/188 (94.68%), Postives = 179/188 (95.21%), Query Frame = 0


Query: 1   MAKRELSNTLRNLKFMQRAGQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60
           MAKRELSNTLRNLKFMQRAGQREE PKKEEEVK DENFFPSSTIIRKCVVLVEGD HPG 
Sbjct: 1   MAKRELSNTLRNLKFMQRAGQREEHPKKEEEVKTDENFFPSSTIIRKCVVLVEGDTHPGD 60

Query: 61  FKGRMSFQSFNPSIDRLNEEVASLGQHEIPGSSSGNHSGNLSSRDNGSSQNEASCSNIDE 120
           FKGRMSFQSFNPSIDRLNE+VASL QHEIPGSS GNH GNLSSRDNGSSQNEASCSN DE
Sbjct: 61  FKGRMSFQSFNPSIDRLNEDVASLDQHEIPGSSPGNHCGNLSSRDNGSSQNEASCSNSDE 120

Query: 121 KNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKLDWNVLRP 180
           KNCEANEDLKRKQS VVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKLDWNVLRP
Sbjct: 121 KNCEANEDLKRKQSVVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKLDWNVLRP 180

Query: 181 SKTPNKSG 189
           SKTPNKSG
Sbjct: 181 SKTPNKSG 188

[Close]

BLAST of Carg03327 vs. ExPASy TrEMBL
Match: A0A6J1JHH4 (uncharacterized protein LOC111484532 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484532 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.2e-89
Identity = 178/195 (91.28%), Postives = 179/195 (91.79%), Query Frame = 0


Query: 1   MAKRELSNTLRNLKFMQRAGQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60
           MAKRELSNTLRNLKFMQRAGQREE PKKEEEVK DENFFPSSTIIRKCVVLVEGD HPG 
Sbjct: 1   MAKRELSNTLRNLKFMQRAGQREEHPKKEEEVKTDENFFPSSTIIRKCVVLVEGDTHPGD 60

Query: 61  FKGRMSFQSFNPSIDRLNEEVASLGQHEIPGSSSGNHSGNLSS-------RDNGSSQNEA 120
           FKGRMSFQSFNPSIDRLNE+VASL QHEIPGSS GNH GNLSS       RDNGSSQNEA
Sbjct: 61  FKGRMSFQSFNPSIDRLNEDVASLDQHEIPGSSPGNHCGNLSSRQKFLFPRDNGSSQNEA 120

Query: 121 SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180
           SCSN DEKNCEANEDLKRKQS VVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL
Sbjct: 121 SCSNSDEKNCEANEDLKRKQSVVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180

Query: 181 DWNVLRPSKTPNKSG 189
           DWNVLRPSKTPNKSG
Sbjct: 181 DWNVLRPSKTPNKSG 195

[Close]

BLAST of Carg03327 vs. ExPASy TrEMBL
Match: A0A6J1G7T2 (uncharacterized protein LOC111451657 OS=Cucurbita moschata OX=3662 GN=LOC111451657 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.7e-79
Identity = 157/188 (83.51%), Postives = 170/188 (90.43%), Query Frame = 0


Query: 1   MAKRELSNTLRNLKFMQRAGQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60
           MAKRE+SNTLRNLKFMQRA Q+EEQPKKEEEVKP+EN FPSS IIRKCVVLVEGDPHPGA
Sbjct: 1   MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKPEENLFPSSNIIRKCVVLVEGDPHPGA 60

Query: 61  FKGRMSFQSFNPSIDRLNEEVASLGQHEIPGSSSGNHSGNLSSRDNGSSQNEASCSNIDE 120
            +GR+SFQSFNPSID+LNEEVASLGQ E P  SSGNHS N+SSR+NGSS+NEA  SN DE
Sbjct: 61  LQGRLSFQSFNPSIDKLNEEVASLGQRETPDPSSGNHSENVSSRENGSSRNEAVFSNNDE 120

Query: 121 KNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKLDWNVLRP 180
           KNCE N DLKRKQSEVVS+GRHPTKFP+SGRDNQQSSF++GKG  KKPKGE LDWNVLRP
Sbjct: 121 KNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRP 180

Query: 181 SKTPNKSG 189
           SKTPNK G
Sbjct: 181 SKTPNKRG 188

[Close]

BLAST of Carg03327 vs. TAIR 10
Match: AT5G59460.1 (scarecrow-like transcription factor 11 (SCL11) )

HSP 1 Score: 129.4 bits (324), Expect = 3.0e-30
Identity = 93/187 (49.73%), Postives = 119/187 (63.64%), Query Frame = 0


Query: 1   MAKRELSNTLRNLKFMQRAGQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60
           MAKRE+S+TLRNLKFMQR+  + E+ K +EE +P+ +F    T+ +KCVV+ + DP PGA
Sbjct: 1   MAKREISSTLRNLKFMQRSSLKVEKKKADEE-EPNGSFPSLRTVAKKCVVITDWDPQPGA 60

Query: 61  FKGRMSFQSFNPSIDRLNEEVASLGQHEIPGSSSGNHSGNLSSRDNGSSQNEASCSNIDE 120
             GRMSFQSFNPSI++L+EE  + G    P SSS N  G  S  +  SS+ E S      
Sbjct: 61  LLGRMSFQSFNPSIEKLHEEAINGGN---PSSSSSN-GGKKSFSEPESSKVEPS------ 120

Query: 121 KNCEANEDLKRKQSEVVSDGRH-PTKFPRSGRDNQQSSFSHGKGPSKKPKGEKLDWNVLR 180
              E + DLKRKQSEVVS+ ++ P K PRS  D    S   G G  KKPK +K+DW+VLR
Sbjct: 121 --GETDGDLKRKQSEVVSEEQNRPNKSPRS-FDKPSPSNKKGNG-FKKPKSKKVDWSVLR 172

Query: 181 PSKTPNK 187
           P K   K
Sbjct: 181 PPKPQTK 172

The following BLAST results are available for this feature:

BLAST of Carg03327 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570693.1	4.1e-98	100.00	hypothetical protein SDJN03_29608, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022943952.1	2.7e-97	98.40	uncharacterized protein LOC111448524 isoform X2 [Cucurbita moschata]	[more]
XP_022943951.1	3.3e-95	94.87	uncharacterized protein LOC111448524 isoform X1 [Cucurbita moschata]	[more]
XP_023512013.1	5.6e-95	97.87	uncharacterized protein LOC111776852 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023512011.1	6.8e-93	94.36	uncharacterized protein LOC111776852 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg03327 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg03327 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FUG1	1.3e-97	98.40	uncharacterized protein LOC111448524 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FT40	1.6e-95	94.87	uncharacterized protein LOC111448524 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JFF6	1.8e-91	94.68	uncharacterized protein LOC111484532 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JHH4	2.2e-89	91.28	uncharacterized protein LOC111484532 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1G7T2	2.7e-79	83.51	uncharacterized protein LOC111451657 OS=Cucurbita moschata OX=3662 GN=LOC1114516...	[more]

BLAST of Carg03327 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59460.1	3.0e-30	49.73	scarecrow-like transcription factor 11 (SCL11)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019324	M-phase phosphoprotein 6	PFAM	PF10175	MPP6	coord: 5..136 e-value: 3.0E-8 score: 34.1
IPR019324	M-phase phosphoprotein 6	PANTHER	PTHR13582	M-PHASE PHOSPHOPROTEIN 6	coord: 1..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03327-RA	Carg03327-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000460	maturation of 5.8S rRNA