Carg03268 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03268
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DNA repair protein RAD51 homolog 2 isoform X1
Location	Carg_Chr20: 2246493 .. 2249798 (-)
RNA-Seq Expression	Carg03268
Synteny	Carg03268

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCACTGTGTTTCCTTCCGTTTTGGCGCCATTTCAACTGCTTACCAGGCGTCGGATCAACCATTCTAGGGTTTCGCCTTTGGCGGGAAAGCAAAGAACGGAGCCAGATAGCATGATTTGACGTAGAGATTCAAGGCGATAGAATGGCGAACAAATTAATTAATCAGATGGGATTACCCAGATCGATAGCTAACATTTTCGCAGCGCGAAATATTAACACAGCCAAGGTAATGATGGAACTTTGGAATTTCGTGATTCCTCACCATTAATTTGTCGATTTGTTCTGCCAGTTCGTGTTTAATATGCCGTAGGAACCGAAGTAGAGCCTTTACATAATGTAGTTCAGATGACCACTCATTGGAAGTCCTTTGTACGGAAATTGAACCACTGCAATGGTTCTTAATTTAGAGTCAGTTCATAATGTCACGTATTGAATGATCTGTAGCCTATTTGAGCCTATAGAAAATGTTTTTTCTGCAGTATCAGTATATTTAATTTGTTTCAGGAAGCTTTATCCTTAACTGAGTTTGAGTTGATGGAGTTATTGGACGTGGGATTGTCGGAAGTTGCATCTGCAGTTGCACACATCAGTGAAGTTGCTTCTCCTCCTTATCAGACCGTAAGCATTCAGTTGATTCTGTTTAATTGGTTGATTTTAGAAGTGATGTTCTTGTGGCGCCTGCAGGTGCTTTCTTTGATGGAGCAAAGACTTCAAAACGAGCATTTATCTGGCCATCTTTCCACATGTTTAAAAGGTTTAGATGAGGCCTTATTTGGTGGGATACCATTTGGTGTTTTGACAGAACTTGTTGGTCCTGCCGGAATTGGCAAGACGCAGGTGTGATTCTTTCCTACTTTTCCGGTTTGCTAATAATCTAAAATTTATATCTGAAAATTTTTACTGATTGGTGTATCAATTGAGAATCTATGATTGCGTTTAAGGGGAAGCATTTTTTACTAATTTCGACTCGCTACTTCTGCTGGTTGATGAATTTCAGTTTTGCTTGAAACTCTCTTTCTTAGCTGCTCTGCCACCGAGCTACGGAGGTTTAGATGGCCGTGTGATATATATTGATGTGGAATCTAAGTTTAGTTCCAGAAGGTATTTTAAGTACCCCATGCTGCTAATGATTTCTATATTTGTGTAATGGGTTGTGAGATCCCACATCGATAGGAGAGGAGAACGAAACATTCATTATAAAGGTGTGAAAACTTCTCCCTAGCAGACGCGTATTAAAACCGTGAAGCTGACGGCGATACATAATCGGCCAAGGCGGACAATATCTCCTAGCGGTGGACTTGGGTTGTTACAAATGGTATCAAAGCTAGACATCGGACAGTGTGCCAGCAAAGACGCTGAAACCCCAAGGGGGTGGATTGTGAGATCCCATGTCGGTTGGAGAGGGGAACGAAGTATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCGTATTACAACCATAAGATTGACGGCGATATGTAACGGACCAAGGCAGACAATATCTGCTAACAGTAGACTTGGGCCGTTACTGGTGCTTTTTCTCCCTGTTTTTCTCTCCAGGATGATTGAAATTGGCATGAGAAGCTTTCCTGATGTATTTCAGAAGGAAGACATGGCAAAAGAGGTATTAAAATAATAAATATTCTCTTCTTTTAAAATTTTAATTTATAGTACATAAGATGGATCGTGCTCAATTTACATTCCAGATGGCCGGTAGGATCCTTGTTTTGCGGCCAGCATCACTTTCTGAATTCACTGAGAGGTTTGGATCAAAGTCAAAGACATGTTATTTGGCCTAGCTATGTCATTGATAGATTAGGGAAAAAAATGCTCACCTCATTTGTGACGACATTTTCAATATCTGCCATGATAAGACGAGTTTCTGCTGTCTGTTTCCTTTCCAGTTTACACAAAATCAAGGTTTCACTTCTTGAGCAAGAAATAAAGCTAGTAATCATTGATAGCATGGCTGCTCTTATTACTGGGTAACTCACCTTTTTTTTTATTTTTTTTTTATCTCATGATGTACTCTACCTTCTGTTCAAGAAAGTGGTTCTTTTTCCAGAGAATATGAGCAAGGGGCACCCAAACAGCATTCATTGGGTTGGCATATTTCATTTATCAAGTGAGATTTACTTTCTCTTTACTTACTCCAGTTGGGTTTTGTTGTGTTTGGTAACTGTTCCATTTATCTTCTGAGTGTTGTCATTTGATTTCCCACCATCTCAGGTCAATTGCTGAGTTCGCACGAATTCCAATTGTCGTGACAAACCAAGTAAGATCCCGGAACAGGAATGAGGTCTCCCATTATTCTTTTCAAGGTAGGGTGATATTGCTATTCTGAAAATTTATAAAATTTGTTTACTTACTATAGCTTCTCTGTTGCAGGATTGAGCAGCAGTGAAATTCAAGAATGTTCTTCAGGATATGATTCTCATCTTGTTGCTGCCTTGGGAGTTCATTGGGCTCATTCTGTGACAATCCGTTTGGTGCTTGAAGCAAAATCTGGTTGGTACACTTTTACTGATTGTTGCCTTATAGCTGACATAATGGACAAAATTACACTTGTTGTGAGATCCCACGTCGGTGGACTCAGGCTGTTGCACTTGTAGTGCCGGTAGAGTTGATGGATCATCATCTTACCGATATTTTCTCAACTTGTTTCACTCTTAAACGAAAAGGAGACAGTCAAAATTTAGAGTTGCTTCTAACAAGTGTTTCATAACTCATCATTTCCGTCCTCCTCCTATAGGTCAGAGGTTTATAAAGCTTGCAAAGTCTCCCATGTCTCCACCTCTAGCTTTCCCATTCAGCATAACCTCATCCGGAATTTCCTTGCTGAGCGACAATGGAAAAGAACTGAGTGGAGCAGAGATCAACGAGATTCACTGCCAAGGTTAATAGTACCAACATAAACAACGCCTTCTCTTCGTTTTCCTATTCTATCGGTCAACGGTCTGGTTGACTTAAGTTAGAAGCTCGATTACACTTAAAACATTTATGACATGTTTCCTCCTTGTTGGTAATCTTCTGTCAAATTATCAAAACGTTCTAAACTGATCTTACAAATTCGGTATCATTGCCTGGGTGATGTTAATTGAGTTACCTTCTAACCTCATTGTCTGAAAATTATCCACCAAGGATGCTACGAGAAGTTGATGCTTTTAGTTGTATTTTATTCCACTATTCAGTCTAACACAGAGTTTCTTTTTTGCTTTTATATCTTTTAGTCATTTGATTTTACGACATTAATGCAGGACACAGTGACATTATCAGCTATCAATTAGGAAAGCAGCAGTGA

mRNA sequence

CCACTGTGTTTCCTTCCGTTTTGGCGCCATTTCAACTGCTTACCAGGCGTCGGATCAACCATTCTAGGGTTTCGCCTTTGGCGGGAAAGCAAAGAACGGAGCCAGATAGCATGATTTGACGTAGAGATTCAAGGCGATAGAATGGCGAACAAATTAATTAATCAGATGGGATTACCCAGATCGATAGCTAACATTTTCGCAGCGCGAAATATTAACACAGCCAAGGAAGCTTTATCCTTAACTGAGTTTGAGTTGATGGAGTTATTGGACGTGGGATTGTCGGAAGTTGCATCTGCAGTTGCACACATCAGTGAAGTTGCTTCTCCTCCTTATCAGACCGTAAGCATTCAGTTGATTCTGTTTAATTGGTTGATTTTAGAAGTGATGTTCTTGTGGCGCCTGCAGGTGCTTTCTTTGATGGAGCAAAGACTTCAAAACGAGCATTTATCTGGCCATCTTTCCACATGTTTAAAAGGTTTAGATGAGGCCTTATTTGGTGGGATACCATTTGGTGTTTTGACAGAACTTGTTGGTCCTGCCGGAATTGGCAAGACGCAGATGGCCGGTAGGATCCTTGTTTTGCGGCCAGCATCACTTTCTGAATTCACTGAGAGTTTACACAAAATCAAGGTTTCACTTCTTGAGCAAGAAATAAAGCTAGTAATCATTGATAGCATGGCTGCTCTTATTACTGGGTCAATTGCTGAGTTCGCACGAATTCCAATTGTCGTGACAAACCAAGTAAGATCCCGGAACAGGAATGAGGTCTCCCATTATTCTTTTCAAGGATTGAGCAGCAGTGAAATTCAAGAATGTTCTTCAGGATATGATTCTCATCTTGTTGCTGCCTTGGGAGTTCATTGGGCTCATTCTGTGACAATCCGTTTGGTGCTTGAAGCAAAATCTGGTCAGAGGTTTATAAAGCTTGCAAAGTCTCCCATGTCTCCACCTCTAGCTTTCCCATTCAGCATAACCTCATCCGGAATTTCCTTGCTGAGCGACAATGGAAAAGAACTGAGTGGAGCAGAGATCAACGAGATTCACTGCCAAGGACACAGTGACATTATCAGCTATCAATTAGGAAAGCAGCAGTGA

Coding sequence (CDS)

ATGGCGAACAAATTAATTAATCAGATGGGATTACCCAGATCGATAGCTAACATTTTCGCAGCGCGAAATATTAACACAGCCAAGGAAGCTTTATCCTTAACTGAGTTTGAGTTGATGGAGTTATTGGACGTGGGATTGTCGGAAGTTGCATCTGCAGTTGCACACATCAGTGAAGTTGCTTCTCCTCCTTATCAGACCGTAAGCATTCAGTTGATTCTGTTTAATTGGTTGATTTTAGAAGTGATGTTCTTGTGGCGCCTGCAGGTGCTTTCTTTGATGGAGCAAAGACTTCAAAACGAGCATTTATCTGGCCATCTTTCCACATGTTTAAAAGGTTTAGATGAGGCCTTATTTGGTGGGATACCATTTGGTGTTTTGACAGAACTTGTTGGTCCTGCCGGAATTGGCAAGACGCAGATGGCCGGTAGGATCCTTGTTTTGCGGCCAGCATCACTTTCTGAATTCACTGAGAGTTTACACAAAATCAAGGTTTCACTTCTTGAGCAAGAAATAAAGCTAGTAATCATTGATAGCATGGCTGCTCTTATTACTGGGTCAATTGCTGAGTTCGCACGAATTCCAATTGTCGTGACAAACCAAGTAAGATCCCGGAACAGGAATGAGGTCTCCCATTATTCTTTTCAAGGATTGAGCAGCAGTGAAATTCAAGAATGTTCTTCAGGATATGATTCTCATCTTGTTGCTGCCTTGGGAGTTCATTGGGCTCATTCTGTGACAATCCGTTTGGTGCTTGAAGCAAAATCTGGTCAGAGGTTTATAAAGCTTGCAAAGTCTCCCATGTCTCCACCTCTAGCTTTCCCATTCAGCATAACCTCATCCGGAATTTCCTTGCTGAGCGACAATGGAAAAGAACTGAGTGGAGCAGAGATCAACGAGATTCACTGCCAAGGACACAGTGACATTATCAGCTATCAATTAGGAAAGCAGCAGTGA

Protein sequence

MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEVASPPYQTVSIQLILFNWLILEVMFLWRLQVLSLMEQRLQNEHLSGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQMAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGSIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHSDIISYQLGKQQ

Homology

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BLAST of Carg03268 vs. NCBI nr
Match: KAG7010599.1 (DNA repair protein RAD51-like 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 598.2 bits (1541), Expect = 4.1e-167
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEVA 60
           MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEVA
Sbjct: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEVA 60

Query: 61  SPPYQTVSIQLILFNWLILEVMFLWRLQVLSLMEQRLQNEHLSGHLSTCLKGLDEALFGG 120
           SPPYQTVSIQLILFNWLILEVMFLWRLQVLSLMEQRLQNEHLSGHLSTCLKGLDEALFGG
Sbjct: 61  SPPYQTVSIQLILFNWLILEVMFLWRLQVLSLMEQRLQNEHLSGHLSTCLKGLDEALFGG 120

Query: 121 IPFGVLTELVGPAGIGKTQMAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMA 180
           IPFGVLTELVGPAGIGKTQMAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMA
Sbjct: 121 IPFGVLTELVGPAGIGKTQMAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMA 180

Query: 181 ALITGSIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVH 240
           ALITGSIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVH
Sbjct: 181 ALITGSIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVH 240

Query: 241 WAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEI 300
           WAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEI
Sbjct: 241 WAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEI 300

Query: 301 HCQGHSDIISYQLGKQQ 318
           HCQGHSDIISYQLGKQQ
Sbjct: 301 HCQGHSDIISYQLGKQQ 317

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BLAST of Carg03268 vs. NCBI nr
Match: KAG6570753.1 (DNA repair protein RAD51-like 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 508.1 bits (1307), Expect = 5.6e-140
Identity = 295/393 (75.06%), Postives = 295/393 (75.06%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEVA 60
           MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEVA
Sbjct: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEVA 60

Query: 61  SPPYQTVSIQLILFNWLILEVMFLWRLQVLSLMEQRLQNEHLSGHLSTCLKGLDEALFGG 120
           SPPYQT                      VLSLMEQRLQNEHLSGHLSTCLKGLDEALFGG
Sbjct: 61  SPPYQT----------------------VLSLMEQRLQNEHLSGHLSTCLKGLDEALFGG 120

Query: 121 IPFGVLTELVGPAGIGKTQ----------------------------------------- 180
           IPFGVLTELVGPAGIGKTQ                                         
Sbjct: 121 IPFGVLTELVGPAGIGKTQFCLKLSFLAALLPSYGGLDGRVIYIDVESKFSSRRMIEIGM 180

Query: 181 ---------------MAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALIT 240
                          MAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALIT
Sbjct: 181 RSFPDVFQKEDMAKEMAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALIT 240

Query: 241 G--------------------SIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQE 300
           G                    SIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQE
Sbjct: 241 GEYEQGAPKQHSLGWHISFIKSIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQE 300

Query: 301 CSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISL 318
           CSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISL
Sbjct: 301 CSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISL 360

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BLAST of Carg03268 vs. NCBI nr
Match: XP_022943309.1 (DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita moschata] >XP_022943310.1 DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita moschata] >XP_022943311.1 DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita moschata] >XP_022943312.1 DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita moschata] >XP_023511983.1 DNA repair protein RAD51 homolog 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 506.5 bits (1303), Expect = 1.6e-139
Identity = 293/393 (74.55%), Postives = 295/393 (75.06%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEVA 60
           MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISE+A
Sbjct: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60

Query: 61  SPPYQTVSIQLILFNWLILEVMFLWRLQVLSLMEQRLQNEHLSGHLSTCLKGLDEALFGG 120
           SPPYQT                      VLSLMEQRLQNEHL+GHLSTCLKGLDEALFGG
Sbjct: 61  SPPYQT----------------------VLSLMEQRLQNEHLAGHLSTCLKGLDEALFGG 120

Query: 121 IPFGVLTELVGPAGIGKTQ----------------------------------------- 180
           IPFGVLTELVGPAGIGKTQ                                         
Sbjct: 121 IPFGVLTELVGPAGIGKTQFCLKLSFLAALPPSYGGLAGRVIYIDVESKFSSRRMIEIGM 180

Query: 181 ---------------MAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALIT 240
                          MAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALIT
Sbjct: 181 RSFPDVFQKKDMAKEMAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALIT 240

Query: 241 G--------------------SIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQE 300
           G                    SIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQE
Sbjct: 241 GEYEQGAPKQHSLGWHISFIKSIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQE 300

Query: 301 CSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISL 318
           CSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISL
Sbjct: 301 CSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISL 360

[Close]

BLAST of Carg03268 vs. NCBI nr
Match: XP_022986663.1 (DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita maxima] >XP_022986664.1 DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita maxima] >XP_022986665.1 DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 504.6 bits (1298), Expect = 6.2e-139
Identity = 292/393 (74.30%), Postives = 294/393 (74.81%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEVA 60
           MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISE+A
Sbjct: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60

Query: 61  SPPYQTVSIQLILFNWLILEVMFLWRLQVLSLMEQRLQNEHLSGHLSTCLKGLDEALFGG 120
           SPPYQT                      VLSLMEQRLQNEHL+GHLSTCLKGLDEALFGG
Sbjct: 61  SPPYQT----------------------VLSLMEQRLQNEHLAGHLSTCLKGLDEALFGG 120

Query: 121 IPFGVLTELVGPAGIGKTQ----------------------------------------- 180
           IPFGVLTELVGPAGIGKTQ                                         
Sbjct: 121 IPFGVLTELVGPAGIGKTQFCLKLSFLAALPPSYGGLAGRVIYIDVEYKFSSRRMIEIGM 180

Query: 181 ---------------MAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALIT 240
                          MAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALIT
Sbjct: 181 RSFPDVFQKKDMAKEMAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALIT 240

Query: 241 G--------------------SIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQE 300
           G                    SIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLS SEIQE
Sbjct: 241 GEYEQGAPKQHSLGWHISFIKSIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSCSEIQE 300

Query: 301 CSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISL 318
           CSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISL
Sbjct: 301 CSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISL 360

[Close]

BLAST of Carg03268 vs. NCBI nr
Match: XP_031744046.1 (DNA repair protein RAD51 homolog 2 [Cucumis sativus] >KGN47322.1 hypothetical protein Csa_023030 [Cucumis sativus])

HSP 1 Score: 473.8 bits (1218), Expect = 1.2e-129
Identity = 275/393 (69.97%), Postives = 285/393 (72.52%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEVA 60
           MAN+LINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISE+A
Sbjct: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60

Query: 61  SPPYQTVSIQLILFNWLILEVMFLWRLQVLSLMEQRLQNEHLSGHLSTCLKGLDEALFGG 120
           SPPYQT                       LSLMEQRLQNEHL+GHLSTCLKGLDEALFGG
Sbjct: 61  SPPYQT----------------------ALSLMEQRLQNEHLAGHLSTCLKGLDEALFGG 120

Query: 121 IPFGVLTELVGPAGIGKTQ----------------------------------------- 180
           IPFGVLTELVGPAGIGKTQ                                         
Sbjct: 121 IPFGVLTELVGPAGIGKTQFCLKLSFLAALPPSYGGLDGRVIYIDVESKFSSKRMIEIGM 180

Query: 181 ---------------MAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALIT 240
                          MAGRILVLRPASLSEFTESLHKIKVSLLEQE+KLVIIDSMAALIT
Sbjct: 181 RSFPDVFNKKDMAQEMAGRILVLRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALIT 240

Query: 241 G--------------------SIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQE 300
           G                    SIAEFARIP+VVTNQVRSRNR EVSHYSFQG S SE QE
Sbjct: 241 GEYELGAPKQHSLGWHISFIKSIAEFARIPVVVTNQVRSRNRKEVSHYSFQGWSRSECQE 300

Query: 301 CSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISL 318
            SSGY SH+VAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPF+IT+SGISL
Sbjct: 301 YSSGYGSHIVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFTITASGISL 360

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BLAST of Carg03268 vs. ExPASy Swiss-Prot
Match: Q9SK02 (DNA repair protein RAD51 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=RAD51B PE=2 SV=2)

HSP 1 Score: 347.4 bits (890), Expect = 1.7e-94
Identity = 202/387 (52.20%), Postives = 246/387 (63.57%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEVA 60
           MANKLI +MGL   I+NIFAARNI TAK+ALS+TEFELMELLDVG+ E+ SA++ ISE  
Sbjct: 1   MANKLIGEMGLHTKISNIFAARNIITAKDALSMTEFELMELLDVGMKEIRSAISFISEAT 60

Query: 61  SPPYQTVSIQLILFNWLILEVMFLWRLQVLSLMEQRLQNEHLSGHLSTCLKGLDEALFGG 120
           SPP Q+                        SL+E++++NEHLSGHL T LKGLD+ L GG
Sbjct: 61  SPPCQSAR----------------------SLLEKKVENEHLSGHLPTHLKGLDDTLCGG 120

Query: 121 IPFGVLTELVGPAGIGKTQ----------------------------------------- 180
           IPFGVLTELVGP GIGK+Q                                         
Sbjct: 121 IPFGVLTELVGPPGIGKSQFCMKLALSASFPVAYGGLDGRVIYIDVESKFSSRRVIEMGL 180

Query: 181 ---------------MAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALIT 240
                          MAGRILVLRP SL+ FTES+ ++K S+L+ ++KL++IDSM AL++
Sbjct: 181 ESFPEVFHLKGMAQEMAGRILVLRPTSLANFTESIQELKNSILQNQVKLLVIDSMTALLS 240

Query: 241 G--------------------SIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQE 300
           G                    S+AEF+RIPIVVTNQVRS+NR+E S YSFQ     E ++
Sbjct: 241 GENKPGAQRQPQLGWHISFLKSLAEFSRIPIVVTNQVRSQNRDETSQYSFQAKVKDEFKD 300

Query: 301 CSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISL 312
            +  YDSHLVAALG++WAH+VTIRLVLEAKSGQR IK+AKSPMSPPLAFPF ITS+GISL
Sbjct: 301 NTKTYDSHLVAALGINWAHAVTIRLVLEAKSGQRIIKVAKSPMSPPLAFPFHITSAGISL 360

[Close]

BLAST of Carg03268 vs. ExPASy Swiss-Prot
Match: O15315 (DNA repair protein RAD51 homolog 2 OS=Homo sapiens OX=9606 GN=RAD51B PE=1 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 3.4e-15
Identity = 87/382 (22.77%), Postives = 152/382 (39.79%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEVA 60
           M +K + ++GL + + +  +   I T ++ L L+  ELM++  +    V   +  +S   
Sbjct: 1   MGSKKLKRVGLSQELCDRLSRHQILTCQDFLCLSPLELMKVTGLSYRGVHELLCMVSRAC 60

Query: 61  SPPYQTVSIQLILFNWLILEVMFLWRLQVLSLMEQRLQNEHLSGHLSTCLKGLDEALFGG 120
           +P  QT                         +  QR   +     LST L  LDEAL GG
Sbjct: 61  APKMQT----------------------AYGIKAQR-SADFSPAFLSTTLSALDEALHGG 120

Query: 121 IPFGVLTELVGPAGIGKTQM---------------------------------------- 180
           +  G LTE+ GP G GKTQ                                         
Sbjct: 121 VACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAE 180

Query: 181 ----------------AGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALIT 240
                           + ++ + R  +  E  + +  ++  ++ + IKLVI+DS+A+++ 
Sbjct: 181 SRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISKGIKLVILDSVASVVR 240

Query: 241 GS-------------------------IAEFARIPIVVTNQVRSRNRNEVSHYS--FQGL 299
                                      +AE   IP+++TNQ+ +     ++  +      
Sbjct: 241 KEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSGALASQADLVSPA 300

[Close]

BLAST of Carg03268 vs. ExPASy Swiss-Prot
Match: O35719 (DNA repair protein RAD51 homolog 2 OS=Mus musculus OX=10090 GN=Rad51b PE=2 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 4.2e-13
Identity = 95/369 (25.75%), Postives = 150/369 (40.65%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEVA 60
           M++K + ++GL   + +  +   I   +  LSL+  ELM++  +    V   +  +S+  
Sbjct: 1   MSSKKLRRVGLSPELCDRLSRYQIVNCQHFLSLSPLELMKVTGLSYRGVHELLHTVSKAC 60

Query: 61  SPPYQTVSIQLILFNWLILEVMFLWRLQVLSLMEQRLQNEHLS-GHLSTCLKGLDEALFG 120
           +P  QT                         L  +R  + HLS   LST L  LDEAL G
Sbjct: 61  APQMQT----------------------AYELKTRR--SAHLSPAFLSTTLCALDEALHG 120

Query: 121 GIPFGVLTELVGPAGIGKTQMAGRILVLR--PASL-------------SEFT-------- 180
           G+P G LTE+ GP G GKTQ    + VL   P SL             S FT        
Sbjct: 121 GVPCGSLTEITGPPGCGKTQFCIMMSVLATLPTSLGGLEGAVVYIDTESAFTAERLVEIA 180

Query: 181 ---------------------------------ESLHKIKVSLLEQEIKLVIIDSMAALI 240
                                            + L  ++  ++ + +KLVI+DS+A+++
Sbjct: 181 ESRFPQYFNTEEKLLLTSSRVHLCRELTCEGLLQRLESLEEEIISKGVKLVIVDSIASVV 240

Query: 241 --------TGSIAEFAR-----------------IPIVVTNQVRSRNRNEVSHYS--FQG 285
                    G+I E  +                 IP+++TNQ+ +     +   +     
Sbjct: 241 RKEFDPKLQGNIKERNKFLGKGASLLKYLAGEFSIPVILTNQITTHLSGALPSQADLVSP 300

[Close]

BLAST of Carg03268 vs. ExPASy TrEMBL
Match: A0A6J1FTX6 (DNA repair protein RAD51 homolog 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448118 PE=4 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 7.9e-140
Identity = 293/393 (74.55%), Postives = 295/393 (75.06%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEVA 60
           MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISE+A
Sbjct: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60

Query: 61  SPPYQTVSIQLILFNWLILEVMFLWRLQVLSLMEQRLQNEHLSGHLSTCLKGLDEALFGG 120
           SPPYQT                      VLSLMEQRLQNEHL+GHLSTCLKGLDEALFGG
Sbjct: 61  SPPYQT----------------------VLSLMEQRLQNEHLAGHLSTCLKGLDEALFGG 120

Query: 121 IPFGVLTELVGPAGIGKTQ----------------------------------------- 180
           IPFGVLTELVGPAGIGKTQ                                         
Sbjct: 121 IPFGVLTELVGPAGIGKTQFCLKLSFLAALPPSYGGLAGRVIYIDVESKFSSRRMIEIGM 180

Query: 181 ---------------MAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALIT 240
                          MAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALIT
Sbjct: 181 RSFPDVFQKKDMAKEMAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALIT 240

Query: 241 G--------------------SIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQE 300
           G                    SIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQE
Sbjct: 241 GEYEQGAPKQHSLGWHISFIKSIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQE 300

Query: 301 CSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISL 318
           CSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISL
Sbjct: 301 CSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISL 360

[Close]

BLAST of Carg03268 vs. ExPASy TrEMBL
Match: A0A6J1JH72 (DNA repair protein RAD51 homolog 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484351 PE=4 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 3.0e-139
Identity = 292/393 (74.30%), Postives = 294/393 (74.81%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEVA 60
           MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISE+A
Sbjct: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60

Query: 61  SPPYQTVSIQLILFNWLILEVMFLWRLQVLSLMEQRLQNEHLSGHLSTCLKGLDEALFGG 120
           SPPYQT                      VLSLMEQRLQNEHL+GHLSTCLKGLDEALFGG
Sbjct: 61  SPPYQT----------------------VLSLMEQRLQNEHLAGHLSTCLKGLDEALFGG 120

Query: 121 IPFGVLTELVGPAGIGKTQ----------------------------------------- 180
           IPFGVLTELVGPAGIGKTQ                                         
Sbjct: 121 IPFGVLTELVGPAGIGKTQFCLKLSFLAALPPSYGGLAGRVIYIDVEYKFSSRRMIEIGM 180

Query: 181 ---------------MAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALIT 240
                          MAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALIT
Sbjct: 181 RSFPDVFQKKDMAKEMAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALIT 240

Query: 241 G--------------------SIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQE 300
           G                    SIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLS SEIQE
Sbjct: 241 GEYEQGAPKQHSLGWHISFIKSIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSCSEIQE 300

Query: 301 CSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISL 318
           CSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISL
Sbjct: 301 CSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISL 360

[Close]

BLAST of Carg03268 vs. ExPASy TrEMBL
Match: A0A0A0KFZ1 (RECA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G296460 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 5.7e-130
Identity = 275/393 (69.97%), Postives = 285/393 (72.52%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEVA 60
           MAN+LINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISE+A
Sbjct: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60

Query: 61  SPPYQTVSIQLILFNWLILEVMFLWRLQVLSLMEQRLQNEHLSGHLSTCLKGLDEALFGG 120
           SPPYQT                       LSLMEQRLQNEHL+GHLSTCLKGLDEALFGG
Sbjct: 61  SPPYQT----------------------ALSLMEQRLQNEHLAGHLSTCLKGLDEALFGG 120

Query: 121 IPFGVLTELVGPAGIGKTQ----------------------------------------- 180
           IPFGVLTELVGPAGIGKTQ                                         
Sbjct: 121 IPFGVLTELVGPAGIGKTQFCLKLSFLAALPPSYGGLDGRVIYIDVESKFSSKRMIEIGM 180

Query: 181 ---------------MAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALIT 240
                          MAGRILVLRPASLSEFTESLHKIKVSLLEQE+KLVIIDSMAALIT
Sbjct: 181 RSFPDVFNKKDMAQEMAGRILVLRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALIT 240

Query: 241 G--------------------SIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQE 300
           G                    SIAEFARIP+VVTNQVRSRNR EVSHYSFQG S SE QE
Sbjct: 241 GEYELGAPKQHSLGWHISFIKSIAEFARIPVVVTNQVRSRNRKEVSHYSFQGWSRSECQE 300

Query: 301 CSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISL 318
            SSGY SH+VAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPF+IT+SGISL
Sbjct: 301 YSSGYGSHIVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFTITASGISL 360

[Close]

BLAST of Carg03268 vs. ExPASy TrEMBL
Match: A0A1S3CKQ5 (DNA repair protein RAD51 homolog 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501904 PE=4 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 1.1e-128
Identity = 272/393 (69.21%), Postives = 283/393 (72.01%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEVA 60
           MAN+LINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLS+VASAVAHISE+A
Sbjct: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSDVASAVAHISEIA 60

Query: 61  SPPYQTVSIQLILFNWLILEVMFLWRLQVLSLMEQRLQNEHLSGHLSTCLKGLDEALFGG 120
           SPPYQT                       LSLMEQRLQNEHL+GHLSTCLKGLDEALFGG
Sbjct: 61  SPPYQT----------------------ALSLMEQRLQNEHLAGHLSTCLKGLDEALFGG 120

Query: 121 IPFGVLTELVGPAGIGKTQ----------------------------------------- 180
           IPFGVLTELVGPAGIGKTQ                                         
Sbjct: 121 IPFGVLTELVGPAGIGKTQFCLKLSFLAALPPSYGGLDGRVIYIDVESKFSSRRMIEIGM 180

Query: 181 ---------------MAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALIT 240
                          MAGRILVLRPASLSEFTESLHKIKVSLLEQE+KLVIIDSMAALIT
Sbjct: 181 RSFPDVFNKKDMAKEMAGRILVLRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALIT 240

Query: 241 G--------------------SIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQE 300
           G                    SIAEFARIP+VVTNQVRSRNR EVSHYSFQG S SE QE
Sbjct: 241 GEYELGAPKQHSLGWHISFIKSIAEFARIPVVVTNQVRSRNRKEVSHYSFQGRSRSESQE 300

Query: 301 CSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISL 318
            SSGYDSHLVAALGVHWAHSVTIRLVLE KSGQRFIKLAKSPMSPPLAFPF+IT SG+SL
Sbjct: 301 YSSGYDSHLVAALGVHWAHSVTIRLVLEVKSGQRFIKLAKSPMSPPLAFPFTITPSGVSL 360

[Close]

BLAST of Carg03268 vs. ExPASy TrEMBL
Match: A0A6J1CY45 (DNA repair protein RAD51 homolog 2 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015517 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 2.5e-125
Identity = 271/393 (68.96%), Postives = 278/393 (70.74%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEVA 60
           MANKLI+QMGLPRSIANIFAARNI TAKEALSLTEFEL+ELLDVGLSEVA AVAHISE+ 
Sbjct: 1   MANKLISQMGLPRSIANIFAARNITTAKEALSLTEFELLELLDVGLSEVAFAVAHISEIT 60

Query: 61  SPPYQTVSIQLILFNWLILEVMFLWRLQVLSLMEQRLQNEHLSGHLSTCLKGLDEALFGG 120
           SPPYQT                      VLSLMEQRLQNEHL+GHLSTCLKGLDEALFGG
Sbjct: 61  SPPYQT----------------------VLSLMEQRLQNEHLAGHLSTCLKGLDEALFGG 120

Query: 121 IPFGVLTELVGPAGIGKTQ----------------------------------------- 180
           IPFGVLTELVGPAGIGKTQ                                         
Sbjct: 121 IPFGVLTELVGPAGIGKTQFCLKLSLLAALPPSYGGLGGRVIYIDVESKFSSRRMIEIGM 180

Query: 181 ---------------MAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALIT 240
                          MAGRILVLRPASLSEFTESL KIKVSLLEQE+KLVIIDSMAALIT
Sbjct: 181 RSFPDVFHKKDMAQEMAGRILVLRPASLSEFTESLQKIKVSLLEQEVKLVIIDSMAALIT 240

Query: 241 G--------------------SIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQE 300
           G                    SIAEFARIPIVVTNQVRSRNRNEVSHYSFQ LSSS  Q 
Sbjct: 241 GEYEQGAPIQNSLGWHISFIKSIAEFARIPIVVTNQVRSRNRNEVSHYSFQELSSSGAQG 300

Query: 301 CSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISL 318
           CS GYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPF ITSSGISL
Sbjct: 301 CSPGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFIITSSGISL 360

[Close]

BLAST of Carg03268 vs. TAIR 10
Match: AT2G28560.2 (DNA repair (Rad51) family protein )

HSP 1 Score: 347.4 bits (890), Expect = 1.2e-95
Identity = 202/387 (52.20%), Postives = 246/387 (63.57%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEVA 60
           MANKLI +MGL   I+NIFAARNI TAK+ALS+TEFELMELLDVG+ E+ SA++ ISE  
Sbjct: 1   MANKLIGEMGLHTKISNIFAARNIITAKDALSMTEFELMELLDVGMKEIRSAISFISEAT 60

Query: 61  SPPYQTVSIQLILFNWLILEVMFLWRLQVLSLMEQRLQNEHLSGHLSTCLKGLDEALFGG 120
           SPP Q+                        SL+E++++NEHLSGHL T LKGLD+ L GG
Sbjct: 61  SPPCQSAR----------------------SLLEKKVENEHLSGHLPTHLKGLDDTLCGG 120

Query: 121 IPFGVLTELVGPAGIGKTQ----------------------------------------- 180
           IPFGVLTELVGP GIGK+Q                                         
Sbjct: 121 IPFGVLTELVGPPGIGKSQFCMKLALSASFPVAYGGLDGRVIYIDVESKFSSRRVIEMGL 180

Query: 181 ---------------MAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALIT 240
                          MAGRILVLRP SL+ FTES+ ++K S+L+ ++KL++IDSM AL++
Sbjct: 181 ESFPEVFHLKGMAQEMAGRILVLRPTSLANFTESIQELKNSILQNQVKLLVIDSMTALLS 240

Query: 241 G--------------------SIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQE 300
           G                    S+AEF+RIPIVVTNQVRS+NR+E S YSFQ     E ++
Sbjct: 241 GENKPGAQRQPQLGWHISFLKSLAEFSRIPIVVTNQVRSQNRDETSQYSFQAKVKDEFKD 300

Query: 301 CSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISL 312
            +  YDSHLVAALG++WAH+VTIRLVLEAKSGQR IK+AKSPMSPPLAFPF ITS+GISL
Sbjct: 301 NTKTYDSHLVAALGINWAHAVTIRLVLEAKSGQRIIKVAKSPMSPPLAFPFHITSAGISL 360

[Close]

BLAST of Carg03268 vs. TAIR 10
Match: AT2G28560.1 (DNA repair (Rad51) family protein )

HSP 1 Score: 337.0 bits (863), Expect = 1.6e-92
Identity = 199/383 (51.96%), Postives = 240/383 (62.66%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEVA 60
           MANKLI +MGL   I+NIFAARNI TAK+ALS+TEFELMELLDVG+ E+ SA++ ISE  
Sbjct: 1   MANKLIGEMGLHTKISNIFAARNIITAKDALSMTEFELMELLDVGMKEIRSAISFISEAT 60

Query: 61  SPPYQTVSIQLILFNWLILEVMFLWRLQVLSLMEQRLQNEHLSGHLSTCLKGLDEALFGG 120
           SPP Q+                        SL+E++++NEHLSGHL T LKGLD+ L GG
Sbjct: 61  SPPCQSAR----------------------SLLEKKVENEHLSGHLPTHLKGLDDTLCGG 120

Query: 121 IPFGVLTELVGPAGIGKTQ----------------------------------------- 180
           IPFGVLTELVGP GIGK+Q                                         
Sbjct: 121 IPFGVLTELVGPPGIGKSQFCMKLALSASFPVAYGGLDGRVIYIDVESKFSSRRVIEMGL 180

Query: 181 ---------------MAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALIT 240
                          MAGRILVLRP SL+ FTES+ ++K S+L+ ++KL++IDSM AL++
Sbjct: 181 ESFPEVFHLKGMAQEMAGRILVLRPTSLANFTESIQELKNSILQNQVKLLVIDSMTALLS 240

Query: 241 G--------------------SIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQE 300
           G                    S+AEF+RIPIVVTNQVRS+NR+E S YSFQ     E ++
Sbjct: 241 GENKPGAQRQPQLGWHISFLKSLAEFSRIPIVVTNQVRSQNRDETSQYSFQAKVKDEFKD 300

Query: 301 CSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISL 308
            +  YDSHLVAALG++WAH+VTIRLVLEAKSGQR IK+AKSPMSPPLAFPF ITS+GISL
Sbjct: 301 NTKTYDSHLVAALGINWAHAVTIRLVLEAKSGQRIIKVAKSPMSPPLAFPFHITSAGISL 360

[Close]

BLAST of Carg03268 vs. TAIR 10
Match: AT2G28560.3 (DNA repair (Rad51) family protein )

HSP 1 Score: 305.8 bits (782), Expect = 4.0e-83
Identity = 178/355 (50.14%), Postives = 219/355 (61.69%), Query Frame = 0


Query: 33  LTEFELMELLDVGLSEVASAVAHISEVASPPYQTVSIQLILFNWLILEVMFLWRLQVLSL 92
           +TEFELMELLDVG+ E+ SA++ ISE  SPP Q+                        SL
Sbjct: 1   MTEFELMELLDVGMKEIRSAISFISEATSPPCQSAR----------------------SL 60

Query: 93  MEQRLQNEHLSGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQ------------- 152
           +E++++NEHLSGHL T LKGLD+ L GGIPFGVLTELVGP GIGK+Q             
Sbjct: 61  LEKKVENEHLSGHLPTHLKGLDDTLCGGIPFGVLTELVGPPGIGKSQFCMKLALSASFPV 120

Query: 153 -------------------------------------------MAGRILVLRPASLSEFT 212
                                                      MAGRILVLRP SL+ FT
Sbjct: 121 AYGGLDGRVIYIDVESKFSSRRVIEMGLESFPEVFHLKGMAQEMAGRILVLRPTSLANFT 180

Query: 213 ESLHKIKVSLLEQEIKLVIIDSMAALITG--------------------SIAEFARIPIV 272
           ES+ ++K S+L+ ++KL++IDSM AL++G                    S+AEF+RIPIV
Sbjct: 181 ESIQELKNSILQNQVKLLVIDSMTALLSGENKPGAQRQPQLGWHISFLKSLAEFSRIPIV 240

Query: 273 VTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSVTIRLVLEAKSG 312
           VTNQVRS+NR+E S YSFQ     E ++ +  YDSHLVAALG++WAH+VTIRLVLEAKSG
Sbjct: 241 VTNQVRSQNRDETSQYSFQAKVKDEFKDNTKTYDSHLVAALGINWAHAVTIRLVLEAKSG 300

[Close]

BLAST of Carg03268 vs. TAIR 10
Match: AT2G28560.4 (DNA repair (Rad51) family protein )

HSP 1 Score: 173.7 bits (439), Expect = 2.3e-43
Identity = 111/259 (42.86%), Postives = 140/259 (54.05%), Query Frame = 0


Query: 33  LTEFELMELLDVGLSEVASAVAHISEVASPPYQTVSIQLILFNWLILEVMFLWRLQVLSL 92
           +TEFELMELLDVG+ E+ SA++ ISE  SPP Q+                        SL
Sbjct: 1   MTEFELMELLDVGMKEIRSAISFISEATSPPCQSAR----------------------SL 60

Query: 93  MEQRLQNEHLSGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQ------------- 152
           +E++++NEHLSGHL T LKGLD+ L GGIPFGVLTELVGP GIGK+Q             
Sbjct: 61  LEKKVENEHLSGHLPTHLKGLDDTLCGGIPFGVLTELVGPPGIGKSQFCMKLALSASFPV 120

Query: 153 -------------------------------------------MAGRILVLRPASLSEFT 212
                                                      MAGRILVLRP SL+ FT
Sbjct: 121 AYGGLDGRVIYIDVESKFSSRRVIEMGLESFPEVFHLKGMAQEMAGRILVLRPTSLANFT 180

Query: 213 ESLHKIKVSLLEQEIKLVIIDSMAALITG--------------------SIAEFARIPIV 216
           ES+ ++K S+L+ ++KL++IDSM AL++G                    S+AEF+RIPIV
Sbjct: 181 ESIQELKNSILQNQVKLLVIDSMTALLSGENKPGAQRQPQLGWHISFLKSLAEFSRIPIV 237

The following BLAST results are available for this feature:

BLAST of Carg03268 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010599.1	4.1e-167	100.00	DNA repair protein RAD51-like 2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6570753.1	5.6e-140	75.06	DNA repair protein RAD51-like 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022943309.1	1.6e-139	74.55	DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita moschata] >XP_022943310...	[more]
XP_022986663.1	6.2e-139	74.30	DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita maxima] >XP_022986664.1...	[more]
XP_031744046.1	1.2e-129	69.97	DNA repair protein RAD51 homolog 2 [Cucumis sativus] >KGN47322.1 hypothetical pr...	[more]

BLAST of Carg03268 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SK02	1.7e-94	52.20	DNA repair protein RAD51 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=RAD51B PE=...	[more]
O15315	3.4e-15	22.77	DNA repair protein RAD51 homolog 2 OS=Homo sapiens OX=9606 GN=RAD51B PE=1 SV=2	[more]
O35719	4.2e-13	25.75	DNA repair protein RAD51 homolog 2 OS=Mus musculus OX=10090 GN=Rad51b PE=2 SV=2	[more]

BLAST of Carg03268 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTX6	7.9e-140	74.55	DNA repair protein RAD51 homolog 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1JH72	3.0e-139	74.30	DNA repair protein RAD51 homolog 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A0A0KFZ1	5.7e-130	69.97	RECA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G296460 PE=4...	[more]
A0A1S3CKQ5	1.1e-128	69.21	DNA repair protein RAD51 homolog 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A6J1CY45	2.5e-125	68.96	DNA repair protein RAD51 homolog 2 isoform X1 OS=Momordica charantia OX=3673 GN=...	[more]

BLAST of Carg03268 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28560.2	1.2e-95	52.20	DNA repair (Rad51) family protein	[more]
AT2G28560.1	1.6e-92	51.96	DNA repair (Rad51) family protein	[more]
AT2G28560.3	4.0e-83	50.14	DNA repair (Rad51) family protein	[more]
AT2G28560.4	2.3e-43	42.86	DNA repair (Rad51) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 95..142 e-value: 5.9E-10 score: 41.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 143..283 e-value: 1.1E-20 score: 76.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 105..285
IPR013632	DNA recombination and repair protein Rad51-like, C-terminal	PFAM	PF08423	Rad51	coord: 187..283 e-value: 6.3E-8 score: 32.2 coord: 105..146 e-value: 1.0E-5 score: 25.0
IPR030548	DNA repair protein RAD51 homologue 2	PANTHER	PTHR46456	DNA REPAIR PROTEIN RAD51 HOMOLOG 2	coord: 139..185 coord: 186..311 coord: 89..140 coord: 1..67
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 102..141 score: 11.658629

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03268-RA	Carg03268-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0006281	DNA repair
cellular_component	GO:0033063	Rad51B-Rad51C-Rad51D-XRCC2 complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0003677	DNA binding