Carg03254 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03254
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	exonuclease V, chloroplastic
Location	Carg_Chr20: 2321764 .. 2326759 (-)
RNA-Seq Expression	Carg03254
Synteny	Carg03254

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAATGTTATTTATTAACATTGATAGCGCGAAGGAAATCTGTGTTCTTCAATAATATCTTCCGCCTTTTGTCTTTCTGTCTTTTCGGAGAAGCTTTTAAATCCTTAAAACTCCAACAACATGGCGATTGCAACGGTAACCTGTCCACGATCCCCCAACTCATTTCACTGGATCGACCAAAAATGGCGGATTCAAGTTCCGGGTTACCGCCATTTAACGACGACGACAATACCCACAAAGACATCCCAAATATTGCGGTTGAGATCGTGAGCGACGAGGAAATGGCCCTAATCGAAGCTGCCTTAGCCGCCGCCGTCACCACTGCTCGATCTTCAAGCTCCGCCATTCATCCACCTTCTTGTTCGTCTCAGAATCTCTTTAACACCAGGTCTATTCACTCTATTACTCTTCTATCCAAAAGGGGCCTCCCTTCTTCCCAGCTAGATATCGAGGATCTCTGCAAATCTTCGAGTACCCAGAAGAAGATCAAAGTCAATGAATCGCTTCTGCAACGTTTTAGAAGGAATAAAGGGTTGGCCGTCACTGATATTACTCGCACGGTATGAATTTCTTGTTTAGATGTTGATTTGATTTGAACGGATTGAACTTTGAAGAACTAAATTTGTTTGTTTATGTAATTATGTCCTGATATGGTATATGCAGGAATGGTGTGAAAAACAGATGGAGTTATGTCTTCTTTCTGGAGTTAGGAAGAAAACCAAAGCTATGGAAGCAGGTATTGCACGCCACGCCATGCTTGAAGCAGAGGTAAACTTCTAGTCTTCAGATTGCACATTTCATTTGTGGATGTTCTTTATTATAGCTGTTGATTACTTCTAGAATATAACGTTAGTTTATGTGAGATCCCACGTCGGTTGGCGAGGAGAATGAAACATTTCTTTAAAGGGTGTGTACACTTTTCCCTAGTGGACGCATTTTAAAATCGTGAGGCTGACAGTGATACGTAATGGGCCAAACAGACGATATTTGCTAGTGATGGGGTTGGGTTGTTACAAATGGTATCAGGGGCAAGCACCAAGTTCTGTGCTAGTGAGAACGTTGTCTCCCAACTGGGGGTGGATTGTGAGATCTTTGATGGAAACAAAGCATTTCTTATAAGGGTGTGGAAACCTCTCCCTAGTCAACGCGTTTTAAAACCGTGAAGTTGACGGCGATACGTAACGAGCCAAAGTGACAATATTTGATAGCAATGGACTTGAATTGTTACATATGGTATTAGAGCCAAGCACTGAGTGGTGTGCCAGTGTGGACGTTGGCTCCCAAGGAGGTGGATTGTGAGATCTCACATCGGTTAGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAAACATCTCCCTAGTAGGCGCGTTTAAAAATTGTGAGGATGACGACGATATGTAACGAGTCAAAGCGGACGATATCTGCTAGTAATGGGCTTTGGTTGTTACAAATGGTATTAGAGTCAAGCACTGAGCAGTGTGCTAGTGAGGACGTTGGCTCCCAAGGGGGGTGGATTGTGAGATCTCACATCGTTTGGAGAGGGGAACGAAGTATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTCGACATGTTTTATAATTGTGAGGCTGATGACGATACGTAACGGGCCAAAGTGGATGATATCTGCTAGCAATGGGCTTGGGTTGTTACAAATGGTATCAGAACCAAGCACTGAGTGGTGTGCTAGTGAGGACGTTGGCTCCCAAGGGGGGGTGGATTGTGAGATCTCACATCGGTTGGAGAGGGGAACGAAGCATTTCTTATATGGGTGTGGAAACCTCTCCCTAGTTAACGTATTTTAAAACTGTGAGGTTGATGGCGATAAGCTTGGGTTGTTACAAATGGTATTAGAGCCAAGCAGTGAGTGGTGTGCCAGTAAGGACGTTGGCTCCCAAGAGGGGTGGATTGTGAGATCTCACATCGGTTGGAGAGGGAAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTCGACGTGTTTTAGAATTGTGAGGCTGATGACGATACGTAATGGGCCAAAGAGGATAATATCTGTTAGCGGTGGGCTTGGGCTGTTACACTTAGGCCTCCCCCTCCCCCCGAAAATGGCTTTTGCAACCACGTGATGGTTGAACCATTTATCACATATTTGACCATGCTAGGACTGAGTTGTGTTAGTTCCACTATGGATAGCTGCCTATAGCATTTAGTGTCAAGTACCTGTTTTAATTGTATTCTACTTGAATCCGTGTAGGTTGTAAAAAAAGTCAAAGTTCAGGTGAAATCAGCTGAAGATAATTGGGCTTTGAAGCTTCTTAATTTTACATCTGGTGTAAACCAACTACTGTTTGAAGGATTGACTCGGGAACTGCCTGTGTAAGTCTCACGTTTTTGTGTCCGGTTGCCCAATCAATATTGTTTGTCCATCAGCAGACATTATAGTTACACCCATAAACTGTTATGCCTGTGGTCGGACATTTTTGTTACACTTCAAAATCTGGCAGCTCTACTGCCTGGTTCAATTCCCTGCATGAATAGGAGAATTGTGATATTCTACGTTGGCTGGGAGGAAAACGGAACATTTTTTATAAAGGTGTAGAAACCTCTTCCTAACAAACCGCATTTTAAAAACCTTGAAGGAAATCCGAAAGGGAAAACTCAAAGAGGACAATATTTGCTAGCGGTGGGCTTGTTACAAATGGTATTAGAAGTAGACATCGGGTGGTGTGCCAATAAAGAGGCTGAGCCTTGGAGGAGGGTGAACATGAGGTGGTGTACCAGCAAGGACGCTAGGTCACGTATAGGGGTAGGTTGGGGGTCCCATATTAGTTGGAGAAGGGAGCGAGTGCCAACGAGGACACTGGGTCTCGAAAGGTGGTGGATTGTGAGATCCCACATCAGCTGGAGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAACATACGTGTTGTAAAAACCTTGAGAGGAAGCCCGAAAGGGAAAGCCCAAAGGGGACAATATATGCTAGTGGTGGGCTTGGGCTGTTACACCAACTTTACATTTTGTGGATAACAAAACGAAGAAACCGAGTAGGATTATTTCTCTCTCGAGCTTCCATTACTCTTGATCTCACTAAAGTTATGTTTGCATTGGATCAGAATGGGGTTAGTAGAAGGTGTATGGATGGTTGGTGTGATTGATGAGATCCAAATGTTGGAGATTGGTACCTGCAAAGTTCCAATGTTGATAGACACAAAAACTCGTATGCGACATACAATTCCTGCTGAACCACAACAAAGAAATGGAAAGTATGTAATTACTTACTGTTTTGTTCATATCTTGCTTGGAAACTATACTGACTTTAACTGTCTATGTTCTTCTTCCAGGCTTCAATTAATGTGTTATAAGTTCTTATTGGACTGTCTGATCTGTGATGGCTTCTCTACCAGACAGTTTTTTGATTTCTTTTCTTTGAATCCTCATTCCATCTTGTCGGAGGAAATTGCCGACAGTACTGTTTCGTTTGGTTTCACTGCAAAGGTAGAGCTTTTAACTTCTTCTTCTTCTTCTTCTTTTTTCTTTTGTATTATAATCATGATGATGATGAAGAAATGATACTAGCGGTGAGATCTGACGTTGGTTGGAGAGGGGAACGAGCATTCCTTGTAAGGGTGTGGGAACCTCTCCCTAGTAGATGCGTTTTAGAAATTGTGAAGTTGATGGTGATATGTAATGGGTCAAAGCGGACAATATCTGCTAGTTGTGGGTTTGGGCTGTTACAAATAGTATTGGAGCTAGAGACCAGGCGGTGTGTCAACGAGGATGTTGGGCGATGTGCCTGCGAGGACGCTGACCCCTAAGATGGTGGATTGTGAGATCCCACATCGGTTGGAGAGAAAACGAAGCATTCCTTGGTGTGGAACCTCTCTCTAGTAGACGCATTTTAATAATCGTGAGGCTGATGGCGATACGTAGCAGGCCAAAGCGGACAATATTTGCTAGCAGTGGGCTTGGGCTATTACAAATGGTATCAGAGTCAGATACTAGGTTGTGTGCCAGTGAGGACGCTAGGCCCCTAGGAGGGGTGGATTGTGAAATCCCACATTGGTTGGAGAAGGGAATAAAATCGTTATAAGGGTGTGGTAATCTCTCCTTAATAGACACATTTTAAAAACTGCGAGGCTAACGACTATATGTAACGGACCGAATCTAACAATATTTGCTAACAGTGGGCTTGGACTGTTACAAATGGTATCAAAGTTAGACACTAGGCAGTGTGTCAATGAGGATGCTGGCACCTAATGGGGGTAGATTGTGAGATCCTACATCGGTCGGAGAGGGAAGCAATACATTCCTTAAAAGGGTGTGAAAATCTCTTCCTAATAGACTAGTTTTAAAAATCGTGAGGCTGACGGTAATACGTAACGGGCCAAAGCGAATAATATCTGCTAGCGGTGGACTTGAGCTGTTACAACATTTTACGTAACATAACGATTGCGAGTTTACCTAGTGATCTTATTTGTACAGACCCTTGATGATGTAGTGAGATACTACATAAACTGTTGTAGCATGCTGCCTCCTACTCACAATCAACTCTTACTAAGGTACATAACATTTCCATAATCCTTTCTATACTTCGCCACGAGTTCTTTCTCGCTCGAACGATGCCTGTCCTTTGCGTTTCATTATAATAATGGTTTCAACATCTGAGTTCCGATATCATATGGTTGATTGTTATGGTGCAGATATGAATCACAAAAGGATCAATCTATTATCGGTGAAGATGAATTTGCATATGATCATGGTTGGCTCAAGAGTCAACTCGAGACCTCACTCCAGGTCTGGCATGGACAACGAGAACCCGAATGTACTCCTCCCGAAGAACGATGGAAATGTCGACATTGTCAATATGCTTCCGATTGCCCTGCAAATGCTAGTCTCAAGCCTACTCGAAAACCGGAGTAATTCATCTAAAAATGTCAACCAAGACTA

mRNA sequence

TTAATGTTATTTATTAACATTGATAGCGCGAAGGAAATCTGTGTTCTTCAATAATATCTTCCGCCTTTTGTCTTTCTGTCTTTTCGGAGAAGCTTTTAAATCCTTAAAACTCCAACAACATGGCGATTGCAACGGTAACCTGTCCACGATCCCCCAACTCATTTCACTGGATCGACCAAAAATGGCGGATTCAAGTTCCGGGTTACCGCCATTTAACGACGACGACAATACCCACAAAGACATCCCAAATATTGCGGTTGAGATCGTGAGCGACGAGGAAATGGCCCTAATCGAAGCTGCCTTAGCCGCCGCCGTCACCACTGCTCGATCTTCAAGCTCCGCCATTCATCCACCTTCTTGTTCGTCTCAGAATCTCTTTAACACCAGGTCTATTCACTCTATTACTCTTCTATCCAAAAGGGGCCTCCCTTCTTCCCAGCTAGATATCGAGGATCTCTGCAAATCTTCGAGTACCCAGAAGAAGATCAAAGTCAATGAATCGCTTCTGCAACGTTTTAGAAGGAATAAAGGGTTGGCCGTCACTGATATTACTCGCACGGAATGGTGTGAAAAACAGATGGAGTTATGTCTTCTTTCTGGAGTTAGGAAGAAAACCAAAGCTATGGAAGCAGGTATTGCACGCCACGCCATGCTTGAAGCAGAGGTTGTAAAAAAAGTCAAAGTTCAGGTGAAATCAGCTGAAGATAATTGGGCTTTGAAGCTTCTTAATTTTACATCTGGTGTAAACCAACTACTGTTTGAAGGATTGACTCGGGAACTGCCTGTAATGGGGTTAGTAGAAGGTGTATGGATGGTTGGTGTGATTGATGAGATCCAAATGTTGGAGATTGGTACCTGCAAAGTTCCAATGTTGATAGACACAAAAACTCGTATGCGACATACAATTCCTGCTGAACCACAACAAAGAAATGGAAAGCTTCAATTAATGTGTTATAAGTTCTTATTGGACTGTCTGATCTGTGATGGCTTCTCTACCAGACAGTTTTTTGATTTCTTTTCTTTGAATCCTCATTCCATCTTGTCGGAGGAAATTGCCGACAGTACTGTTTCGTTTGGTTTCACTGCAAAGACCCTTGATGATGTAGTGAGATACTACATAAACTGTTGTAGCATGCTGCCTCCTACTCACAATCAACTCTTACTAAGATATGAATCACAAAAGGATCAATCTATTATCGGTGAAGATGAATTTGCATATGATCATGGTTGGCTCAAGAGTCAACTCGAGACCTCACTCCAGGTCTGGCATGGACAACGAGAACCCGAATGTACTCCTCCCGAAGAACGATGGAAATGTCGACATTGTCAATATGCTTCCGATTGCCCTGCAAATGCTAGTCTCAAGCCTACTCGAAAACCGGAGTAATTCATCTAAAAATGTCAACCAAGACTA

Coding sequence (CDS)

ATGGCGGATTCAAGTTCCGGGTTACCGCCATTTAACGACGACGACAATACCCACAAAGACATCCCAAATATTGCGGTTGAGATCGTGAGCGACGAGGAAATGGCCCTAATCGAAGCTGCCTTAGCCGCCGCCGTCACCACTGCTCGATCTTCAAGCTCCGCCATTCATCCACCTTCTTGTTCGTCTCAGAATCTCTTTAACACCAGGTCTATTCACTCTATTACTCTTCTATCCAAAAGGGGCCTCCCTTCTTCCCAGCTAGATATCGAGGATCTCTGCAAATCTTCGAGTACCCAGAAGAAGATCAAAGTCAATGAATCGCTTCTGCAACGTTTTAGAAGGAATAAAGGGTTGGCCGTCACTGATATTACTCGCACGGAATGGTGTGAAAAACAGATGGAGTTATGTCTTCTTTCTGGAGTTAGGAAGAAAACCAAAGCTATGGAAGCAGGTATTGCACGCCACGCCATGCTTGAAGCAGAGGTTGTAAAAAAAGTCAAAGTTCAGGTGAAATCAGCTGAAGATAATTGGGCTTTGAAGCTTCTTAATTTTACATCTGGTGTAAACCAACTACTGTTTGAAGGATTGACTCGGGAACTGCCTGTAATGGGGTTAGTAGAAGGTGTATGGATGGTTGGTGTGATTGATGAGATCCAAATGTTGGAGATTGGTACCTGCAAAGTTCCAATGTTGATAGACACAAAAACTCGTATGCGACATACAATTCCTGCTGAACCACAACAAAGAAATGGAAAGCTTCAATTAATGTGTTATAAGTTCTTATTGGACTGTCTGATCTGTGATGGCTTCTCTACCAGACAGTTTTTTGATTTCTTTTCTTTGAATCCTCATTCCATCTTGTCGGAGGAAATTGCCGACAGTACTGTTTCGTTTGGTTTCACTGCAAAGACCCTTGATGATGTAGTGAGATACTACATAAACTGTTGTAGCATGCTGCCTCCTACTCACAATCAACTCTTACTAAGATATGAATCACAAAAGGATCAATCTATTATCGGTGAAGATGAATTTGCATATGATCATGGTTGGCTCAAGAGTCAACTCGAGACCTCACTCCAGGTCTGGCATGGACAACGAGAACCCGAATGTACTCCTCCCGAAGAACGATGGAAATGTCGACATTGTCAATATGCTTCCGATTGCCCTGCAAATGCTAGTCTCAAGCCTACTCGAAAACCGGAGTAA

Protein sequence

MADSSSGLPPFNDDDNTHKDIPNIAVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSCSSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAVTDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALKLLNFTSGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRHTIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGFTAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQVWHGQREPECTPPEERWKCRHCQYASDCPANASLKPTRKPE

Homology

[Close]

BLAST of Carg03254 vs. NCBI nr
Match: KAG7010613.1 (Exonuclease V, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 799.3 bits (2063), Expect = 1.5e-227
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 0


Query: 1   MADSSSGLPPFNDDDNTHKDIPNIAVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 60
           MADSSSGLPPFNDDDNTHKDIPNIAVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC
Sbjct: 1   MADSSSGLPPFNDDDNTHKDIPNIAVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 60

Query: 61  SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120
           SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV
Sbjct: 61  SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120

Query: 121 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK 180
           TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK
Sbjct: 121 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK 180

Query: 181 LLNFTSGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH 240
           LLNFTSGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH
Sbjct: 181 LLNFTSGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH 240

Query: 241 TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGF 300
           TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGF
Sbjct: 241 TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGF 300

Query: 301 TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQ 360
           TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQ
Sbjct: 301 TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQ 360

Query: 361 VWHGQREPECTPPEERWKCRHCQYASDCPANASLKPTRKPE 402
           VWHGQREPECTPPEERWKCRHCQYASDCPANASLKPTRKPE
Sbjct: 361 VWHGQREPECTPPEERWKCRHCQYASDCPANASLKPTRKPE 401

[Close]

BLAST of Carg03254 vs. NCBI nr
Match: KAG6570766.1 (Exonuclease V, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 789.3 bits (2037), Expect = 1.6e-224
Identity = 396/401 (98.75%), Postives = 397/401 (99.00%), Query Frame = 0


Query: 1   MADSSSGLPPFNDDDNTHKDIPNIAVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 60
           MADSSSGLPPFNDDDNTHKDIPNI VEIVSDEEMALIEAALAAAV TARSSSSAIHPPSC
Sbjct: 1   MADSSSGLPPFNDDDNTHKDIPNIPVEIVSDEEMALIEAALAAAVNTARSSSSAIHPPSC 60

Query: 61  SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120
           SSQNLF+TRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV
Sbjct: 61  SSQNLFHTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120

Query: 121 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK 180
           TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK
Sbjct: 121 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK 180

Query: 181 LLNFTSGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH 240
           LLNFT GVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH
Sbjct: 181 LLNFTFGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH 240

Query: 241 TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGF 300
           TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGF
Sbjct: 241 TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGF 300

Query: 301 TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQ 360
           TAKTLDDVVRYYINCCSMLPP HNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQ
Sbjct: 301 TAKTLDDVVRYYINCCSMLPPVHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQ 360

Query: 361 VWHGQREPECTPPEERWKCRHCQYASDCPANASLKPTRKPE 402
           VWHGQREPECTPPEERWKCRHCQYASDCPANASLKPTRKPE
Sbjct: 361 VWHGQREPECTPPEERWKCRHCQYASDCPANASLKPTRKPE 401

[Close]

BLAST of Carg03254 vs. NCBI nr
Match: XP_022943527.1 (LOW QUALITY PROTEIN: exonuclease V, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 786.9 bits (2031), Expect = 7.9e-224
Identity = 394/401 (98.25%), Postives = 397/401 (99.00%), Query Frame = 0


Query: 1   MADSSSGLPPFNDDDNTHKDIPNIAVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 60
           MADSSSGLPPFNDDDNTHKD+PNI VEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC
Sbjct: 22  MADSSSGLPPFNDDDNTHKDVPNIPVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 81

Query: 61  SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120
           SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRR KGLAV
Sbjct: 82  SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRTKGLAV 141

Query: 121 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK 180
           TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLE+EVVKKVKVQVKSAEDNWALK
Sbjct: 142 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLESEVVKKVKVQVKSAEDNWALK 201

Query: 181 LLNFTSGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH 240
           LLNFT GVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH
Sbjct: 202 LLNFTFGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH 261

Query: 241 TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGF 300
           TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGF
Sbjct: 262 TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGF 321

Query: 301 TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQ 360
           TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQ
Sbjct: 322 TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQ 381

Query: 361 VWHGQREPECTPPEERWKCRHCQYASDCPANASLKPTRKPE 402
           VWHGQREPECTPPEERWKCRHCQYAS+CPANASL PTRKPE
Sbjct: 382 VWHGQREPECTPPEERWKCRHCQYASNCPANASLDPTRKPE 422

[Close]

BLAST of Carg03254 vs. NCBI nr
Match: XP_022985622.1 (exonuclease V, chloroplastic [Cucurbita maxima] >XP_022985623.1 exonuclease V, chloroplastic [Cucurbita maxima] >XP_022985624.1 exonuclease V, chloroplastic [Cucurbita maxima])

HSP 1 Score: 781.9 bits (2018), Expect = 2.6e-222
Identity = 391/401 (97.51%), Postives = 395/401 (98.50%), Query Frame = 0


Query: 1   MADSSSGLPPFNDDDNTHKDIPNIAVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 60
           MADSSSGLPP+NDDDNTHK +PNI VEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC
Sbjct: 22  MADSSSGLPPYNDDDNTHKGVPNIPVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 81

Query: 61  SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120
           SSQNLFNTRSIHSITLLSKRGLPSSQLD+EDLCKSSSTQKKIKVNESLLQRFRRNKGLAV
Sbjct: 82  SSQNLFNTRSIHSITLLSKRGLPSSQLDVEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 141

Query: 121 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK 180
           TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK
Sbjct: 142 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK 201

Query: 181 LLNFTSGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH 240
           LLNFT GVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH
Sbjct: 202 LLNFTFGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH 261

Query: 241 TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGF 300
           TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADS+ SFGF
Sbjct: 262 TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSSASFGF 321

Query: 301 TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQ 360
           TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSII EDEFAYDHGWLKSQLETSLQ
Sbjct: 322 TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIREDEFAYDHGWLKSQLETSLQ 381

Query: 361 VWHGQREPECTPPEERWKCRHCQYASDCPANASLKPTRKPE 402
           VWHGQREPECTPPEERWKCRHCQYASDCPANASL PTRKPE
Sbjct: 382 VWHGQREPECTPPEERWKCRHCQYASDCPANASLDPTRKPE 422

[Close]

BLAST of Carg03254 vs. NCBI nr
Match: XP_023511975.1 (LOW QUALITY PROTEIN: exonuclease V, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 781.2 bits (2016), Expect = 4.4e-222
Identity = 393/401 (98.00%), Postives = 394/401 (98.25%), Query Frame = 0


Query: 1   MADSSSGLPPFNDDDNTHKDIPNIAVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 60
           MADSSSGLPPFNDDDNTHK +PNI VEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC
Sbjct: 22  MADSSSGLPPFNDDDNTHKGVPNIPVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 81

Query: 61  SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120
           SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV
Sbjct: 82  SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 141

Query: 121 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK 180
           TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK
Sbjct: 142 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK 201

Query: 181 LLNFTSGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH 240
           LLNFT GVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH
Sbjct: 202 LLNFTFGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH 261

Query: 241 TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGF 300
           TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADST S GF
Sbjct: 262 TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTASSGF 321

Query: 301 TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQ 360
           TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQ
Sbjct: 322 TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQ 381

Query: 361 VWHGQREPECTPPEERWKCRHCQYASDCPANASLKPTRKPE 402
           VWHGQREPECTP EERWKCRHCQYASDCPANASL PTRKPE
Sbjct: 382 VWHGQREPECTPLEERWKCRHCQYASDCPANASLDPTRKPE 422

[Close]

BLAST of Carg03254 vs. ExPASy Swiss-Prot
Match: Q9FKK6 (Exonuclease V, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g60370 PE=2 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 2.0e-97
Identity = 201/404 (49.75%), Postives = 264/404 (65.35%), Query Frame = 0


Query: 4   SSSGLPPFNDDDNTHKDIPNIAVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSCSSQ 63
           + SG    +   + H   P I +EIVS+EEMA+++AALAA+ +   S   ++ P   ++ 
Sbjct: 22  AQSGTVSISSPQSHHVVFPEIPIEIVSEEEMAILDAALAASRSILPSVIRSVSPSRITAG 81

Query: 64  NLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAVTDI 123
              + ++I SITL SKR L S+  DIE               ES L RFRRN+ L VTD+
Sbjct: 82  G--SPKTIRSITLFSKRKL-SACSDIE---------------ESYLHRFRRNQALGVTDL 141

Query: 124 TRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALKLLN 183
           T TEWCEKQME  L  G RK  KAM+ G ARH  LE EVVKKV+V+V+S ED WALKLLN
Sbjct: 142 TGTEWCEKQMENVLCFGRRKVNKAMKVGQARHLQLEEEVVKKVRVKVESNEDKWALKLLN 201

Query: 184 FTSGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQ--MLEIGTCKVPMLIDTKTRMRHT 243
             +GVNQ LFEG TREL ++G V G W+VG+IDE++    E  +   P+LIDTKTR+R T
Sbjct: 202 SIAGVNQFLFEGRTRELLLLGFVGGQWIVGIIDELRKAYAEESSDSGPILIDTKTRLRDT 261

Query: 244 IPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGFT 303
           +PAEPQ+RNG+LQLM YK L D ++ +GF T  FFD+FSLN + +LS+++ D   + G  
Sbjct: 262 LPAEPQRRNGRLQLMLYKLLWDTIVKEGFPTGPFFDYFSLNRNYVLSQDVRDHIANAGIK 321

Query: 304 AKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQV 363
           A+TL+++VRYY N   MLP  +NQLLL+YE QKDQSII E  F +DH W+ S+    ++ 
Sbjct: 322 AQTLEEIVRYYENTFQMLPIANNQLLLKYEFQKDQSIIAEIRFNHDHEWVMSKYREVIEF 381

Query: 364 WHGQREPECTPPEERWKCRHCQYASDCPANASLK------PTRK 400
           W  +RE   TP EERWKCR+CQ+A  CP N S +      PTR+
Sbjct: 382 WRNEREAGYTPEEERWKCRYCQFAKSCPGNPSFESPSTSSPTRE 407

[Close]

BLAST of Carg03254 vs. ExPASy Swiss-Prot
Match: A2VDX7 (Exonuclease V OS=Bos taurus OX=9913 GN=EXO5 PE=2 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 1.8e-32
Identity = 98/317 (30.91%), Postives = 159/317 (50.16%), Query Frame = 0


Query: 78  SKRGLPSSQLDIED--LCKSSSTQKKIKVNESLLQRFRRNKGLAVTDITRTEWCEKQMEL 137
           SK G PS +L  +D  L +S   ++++ V+ S ++RF   K L VTD++   WCE+QM  
Sbjct: 39  SKPG-PSYELPGKDDKLIRSPKWKRRLDVS-SPMERFHL-KYLYVTDLSTQNWCEQQMVY 98

Query: 138 CL-LSG--VRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALKLLNFTSGVNQLL 197
               SG    +K+  ++ G + H   E EV   V + + S ED WA+K LN  S +  L 
Sbjct: 99  GKEFSGFLTPEKSAILDTGASIHLARELEVHDLVSIPITSKEDAWAVKFLNILSMIPTLQ 158

Query: 198 FEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRHTIPAEPQQRNGK 257
            EG  RE PV   VEGV +VGVIDE+     G  +   L + KTR    +P++ Q++   
Sbjct: 159 SEGRIREFPVFAEVEGVLLVGVIDELHYTASGELE---LTELKTRGNPVLPSDAQKKKDY 218

Query: 258 LQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGFTAKTLDDVVR-Y 317
            Q+  YK++ D ++    +         L+P   L   +       G++ K+L D++   
Sbjct: 219 FQVSLYKYIFDAMVQGKVTAASLIHHTKLDPEKPLGPSVLRHAQQGGYSVKSLGDLIELV 278

Query: 318 YINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQVWHGQREPECT 377
           +++      P  + L + Y  Q   +++G +  A+    ++S+++  +  W G REP+  
Sbjct: 279 FLSLTLSDLPLIDSLKIEYVHQGTATVLGTEMVAFAEKEVRSKVQHYMTYWMGHREPQGV 338

Query: 378 PPEERWKCRHCQYASDC 389
             EE WKCR C YA  C
Sbjct: 339 DVEEAWKCRMCNYADIC 349

[Close]

BLAST of Carg03254 vs. ExPASy Swiss-Prot
Match: Q9CXP9 (Exonuclease V OS=Mus musculus OX=10090 GN=Exo5 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.2e-28
Identity = 97/321 (30.22%), Postives = 153/321 (47.66%), Query Frame = 0


Query: 73  SITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNE-SLLQRFRRNKGLAVTDITRTEWCEK 132
           S   LSK G PS++L  +D    S    K  ++  S ++RF   K L VTD+    WCE 
Sbjct: 37  SAVSLSKPG-PSAELPGKDDKPVSLQNWKGGLDVLSPMERFHL-KYLYVTDLCTQNWCEL 96

Query: 133 QM---ELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALKLLNFTSGV 192
           QM   +    S   +K   ++ G + H   E E+   V V + + ED WA+K LN  + +
Sbjct: 97  QMVYGKELPGSLTPEKAAVLDTGASIHLAKELELHDLVTVPIATKEDAWAVKFLNILAMI 156

Query: 193 NQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRHTIPAEPQQ 252
             L  EG  RE PV G VEG+++VGVIDE+     G  +   L + KTR R  +P   Q+
Sbjct: 157 PALQSEGRVREFPVFGEVEGIFLVGVIDELHYTSKGELE---LAELKTRRRPVLPLPAQK 216

Query: 253 RNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGFTAKTLDDV 312
           +    Q+  YK++ D ++    +         L     L   +       G + K+L D+
Sbjct: 217 KKDYFQVSLYKYIFDAMVQGKVTPASLIHHTKLCLDKPLGPSVLRHARQGGVSVKSLGDL 276

Query: 313 VR-YYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQVWHGQRE 372
           +   +++      P  + L L Y  Q+  +I+G +  A++   +KS+++  +  W G R+
Sbjct: 277 MELVFLSLTLSDLPAIDTLKLEYIHQETATILGTEIVAFEEKEVKSKVQHYVAYWMGHRD 336

Query: 373 PECTPPEERWKCRHCQYASDC 389
           P+    EE WKCR C Y   C
Sbjct: 337 PQGVDVEEAWKCRTCDYVDIC 352

[Close]

BLAST of Carg03254 vs. ExPASy Swiss-Prot
Match: Q9H790 (Exonuclease V OS=Homo sapiens OX=9606 GN=EXO5 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.2e-27
Identity = 95/320 (29.69%), Postives = 147/320 (45.94%), Query Frame = 0


Query: 73  SITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAVTDITRTEWCEKQ 132
           S  L++  G  S  L  +D   S    K+     S ++RF   K L VTD+    WCE Q
Sbjct: 37  SKALVNMPGPSSESLGKDDKPISLQNWKRGLDILSPMERFHL-KYLYVTDLATQNWCELQ 96

Query: 133 MELCL-LSG--VRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALKLLNFTSGVN 192
                 L G    +K   ++ G + H   E E+   V V V + ED WA+K LN    + 
Sbjct: 97  TAYGKELPGFLAPEKAAVLDTGASIHLARELELHDLVTVPVTTKEDAWAIKFLNILLLIP 156

Query: 193 QLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRHTIPAEPQQR 252
            L  EG  RE PV G  EGV +VGVIDE+     G  +   L + KTR R  +P E Q++
Sbjct: 157 TLQSEGHIREFPVFGEGEGVLLVGVIDELHYTAKGELE---LAELKTRRRPMLPLEAQKK 216

Query: 253 NGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGFTAKTLDDVV 312
               Q+  YK++ D ++    +         L     L   +       GF+ K+L D++
Sbjct: 217 KDCFQVSLYKYIFDAMVQGKVTPASLIHHTKLCLEKPLGPSVLRHAQQGGFSVKSLGDLM 276

Query: 313 R-YYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQVWHGQREP 372
              +++      P  + L + Y  Q+  +++G +  A+    ++++++  +  W G REP
Sbjct: 277 ELVFLSLTLSDLPVIDILKIEYIHQETATVLGTEIVAFKEKEVRAKVQHYMAYWMGHREP 336

Query: 373 ECTPPEERWKCRHCQYASDC 389
           +    EE WKCR C YA  C
Sbjct: 337 QGVDVEEAWKCRTCTYADIC 352

[Close]

BLAST of Carg03254 vs. ExPASy Swiss-Prot
Match: F1Q514 (Exonuclease V OS=Danio rerio OX=7955 GN=exo5 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.4e-26
Identity = 118/395 (29.87%), Postives = 176/395 (44.56%), Query Frame = 0


Query: 1   MADSSSGLPPFND-DDNTHKDIPNIAVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPS 60
           M D+S    P +  DD +  +  NI     SDEE   IE+ L     T    S  +  PS
Sbjct: 1   MMDASRSQQPLDAWDDISDSEFLNIP----SDEES--IESQLPLIGETKGKHSVNLDKPS 60

Query: 61  CSSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLA 120
            SS       S H  +  + +       D+  L + S  +       S +QRFR+ + L+
Sbjct: 61  SSS-------SFHKCSEEAPKQEAVKTDDVRGLKRKSLHENSF----SPMQRFRK-QHLS 120

Query: 121 VTDITRTEWCEKQMELCLLSG--VRKKTKAMEAGIAR--HAMLEAEVVKKVKVQVKSAED 180
           VT +    WCE +    LL     RK+ +  E  I +  H   E E+   V V +++ ED
Sbjct: 121 VTLLCDQTWCEMKSVYNLLKPHIKRKEMQRTEVQIGQEIHLSRELEIQDVVPVDIRTRED 180

Query: 181 NWALKLLNFTSGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTK 240
             A+KLLN    +  L      RE PV G+ EGV+++GVIDE+   + G     +L + K
Sbjct: 181 GEAVKLLNMLHMIPLLEAGQRVREFPVFGVQEGVFIMGVIDELMYNQKGEL---VLNELK 240

Query: 241 TRMRHTIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADST 300
           TR ++++P+  Q +    Q+  YK L D L+         FD   L    IL   +    
Sbjct: 241 TRRQNSLPSSAQDKVNCFQVGLYKLLFDGLVRGEMKKNHIFDHLKLRSAQILGAGVQAHA 300

Query: 301 VSFGFTAKTLDDVVRYYI--NCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKS 360
            + G  A+T +++V   +    CS L P  + L + Y  Q     IG     +D   ++ 
Sbjct: 301 KNLGVHARTFEELVETLLITVSCSDL-PCIDLLQIEYFHQGSNGPIGTRVAPFDEAQIRG 360

Query: 361 QLETSLQVWHGQREPECTPPEERWKCRHCQYASDC 389
           +L+  L  W GQREP+    EE WKCR C Y   C
Sbjct: 361 ELQAYLSYWTGQREPKGVDIEEAWKCRSCLYEEIC 373

[Close]

BLAST of Carg03254 vs. ExPASy TrEMBL
Match: A0A6J1FT99 (LOW QUALITY PROTEIN: exonuclease V, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111448276 PE=3 SV=1)

HSP 1 Score: 786.9 bits (2031), Expect = 3.8e-224
Identity = 394/401 (98.25%), Postives = 397/401 (99.00%), Query Frame = 0


Query: 1   MADSSSGLPPFNDDDNTHKDIPNIAVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 60
           MADSSSGLPPFNDDDNTHKD+PNI VEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC
Sbjct: 22  MADSSSGLPPFNDDDNTHKDVPNIPVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 81

Query: 61  SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120
           SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRR KGLAV
Sbjct: 82  SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRTKGLAV 141

Query: 121 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK 180
           TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLE+EVVKKVKVQVKSAEDNWALK
Sbjct: 142 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLESEVVKKVKVQVKSAEDNWALK 201

Query: 181 LLNFTSGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH 240
           LLNFT GVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH
Sbjct: 202 LLNFTFGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH 261

Query: 241 TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGF 300
           TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGF
Sbjct: 262 TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGF 321

Query: 301 TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQ 360
           TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQ
Sbjct: 322 TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQ 381

Query: 361 VWHGQREPECTPPEERWKCRHCQYASDCPANASLKPTRKPE 402
           VWHGQREPECTPPEERWKCRHCQYAS+CPANASL PTRKPE
Sbjct: 382 VWHGQREPECTPPEERWKCRHCQYASNCPANASLDPTRKPE 422

[Close]

BLAST of Carg03254 vs. ExPASy TrEMBL
Match: A0A6J1J5D7 (exonuclease V, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111483632 PE=3 SV=1)

HSP 1 Score: 781.9 bits (2018), Expect = 1.2e-222
Identity = 391/401 (97.51%), Postives = 395/401 (98.50%), Query Frame = 0


Query: 1   MADSSSGLPPFNDDDNTHKDIPNIAVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 60
           MADSSSGLPP+NDDDNTHK +PNI VEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC
Sbjct: 22  MADSSSGLPPYNDDDNTHKGVPNIPVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 81

Query: 61  SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120
           SSQNLFNTRSIHSITLLSKRGLPSSQLD+EDLCKSSSTQKKIKVNESLLQRFRRNKGLAV
Sbjct: 82  SSQNLFNTRSIHSITLLSKRGLPSSQLDVEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 141

Query: 121 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK 180
           TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK
Sbjct: 142 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK 201

Query: 181 LLNFTSGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH 240
           LLNFT GVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH
Sbjct: 202 LLNFTFGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH 261

Query: 241 TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGF 300
           TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADS+ SFGF
Sbjct: 262 TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSSASFGF 321

Query: 301 TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQ 360
           TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSII EDEFAYDHGWLKSQLETSLQ
Sbjct: 322 TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIREDEFAYDHGWLKSQLETSLQ 381

Query: 361 VWHGQREPECTPPEERWKCRHCQYASDCPANASLKPTRKPE 402
           VWHGQREPECTPPEERWKCRHCQYASDCPANASL PTRKPE
Sbjct: 382 VWHGQREPECTPPEERWKCRHCQYASDCPANASLDPTRKPE 422

[Close]

BLAST of Carg03254 vs. ExPASy TrEMBL
Match: A0A5A7SXN1 (Exonuclease V OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00520 PE=3 SV=1)

HSP 1 Score: 651.7 bits (1680), Expect = 1.9e-183
Identity = 337/393 (85.75%), Postives = 352/393 (89.57%), Query Frame = 0


Query: 1   MADSSSGLPPFNDDDNTHKDIPNIAVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 60
           MADS SGLPPF DDDNTH+  PNI VEIVSDEEMALIEAALAAAVTT+RSSSS IH  SC
Sbjct: 1   MADSHSGLPPFKDDDNTHEGFPNIPVEIVSDEEMALIEAALAAAVTTSRSSSSVIHSTSC 60

Query: 61  SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120
           SS NLFNTRSIHSITLLSKRG+ SSQ DIEDL K   TQKKIKVNESLLQRF+RNK LAV
Sbjct: 61  SSHNLFNTRSIHSITLLSKRGIDSSQPDIEDLGKIPITQKKIKVNESLLQRFKRNKPLAV 120

Query: 121 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK 180
           TDITR EWCEKQME  LLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQV+S ED WALK
Sbjct: 121 TDITRMEWCEKQMEFSLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVQSFEDIWALK 180

Query: 181 LLNFTSGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH 240
           LLNF  GV+QL+ EGLTRELPVMGLVEGVW+VG+IDEIQMLEI T K+PMLIDTKTR+R 
Sbjct: 181 LLNFIVGVHQLVLEGLTRELPVMGLVEGVWIVGIIDEIQMLEINTTKIPMLIDTKTRVRD 240

Query: 241 TIPAEPQQRNGKLQLMCYKFLLDCLI-CDGFSTRQFFDFFSLNPHSILSEEIADSTVSFG 300
           TIPA PQ+RNGKLQLM YK LLD LI  DGF  RQFFDFFSLNPHS LSEEIADS+ SFG
Sbjct: 241 TIPAVPQRRNGKLQLMFYKLLLDNLISSDGFPIRQFFDFFSLNPHSTLSEEIADSSTSFG 300

Query: 301 FTAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSL 360
           FTAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSII ED+FAYDHGWLKSQLE  L
Sbjct: 301 FTAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIVEDKFAYDHGWLKSQLEIQL 360

Query: 361 QVWHGQREPECTPPEERWKCRHCQYASDCPANA 393
           QVWHGQREPECTP EERWKCRHCQ+ASDCPANA
Sbjct: 361 QVWHGQREPECTPQEERWKCRHCQFASDCPANA 393

[Close]

BLAST of Carg03254 vs. ExPASy TrEMBL
Match: A0A1S3CLU8 (LOW QUALITY PROTEIN: exonuclease V, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501929 PE=3 SV=1)

HSP 1 Score: 647.9 bits (1670), Expect = 2.8e-182
Identity = 335/393 (85.24%), Postives = 351/393 (89.31%), Query Frame = 0


Query: 1   MADSSSGLPPFNDDDNTHKDIPNIAVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 60
           MADS SGLPPF DDDNTH+  PNI VEIVSDEEMALIEAALAAAVTT+RSSSS IH  SC
Sbjct: 1   MADSHSGLPPFKDDDNTHEGFPNIPVEIVSDEEMALIEAALAAAVTTSRSSSSVIHSTSC 60

Query: 61  SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120
           SS NLFNTRSIHSITLLSKRG+ SSQ DIEDL K   TQKKIKVNESLLQRF+RNK LAV
Sbjct: 61  SSHNLFNTRSIHSITLLSKRGIDSSQPDIEDLGKIPITQKKIKVNESLLQRFKRNKPLAV 120

Query: 121 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK 180
           TDITR EWCEKQME  LLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQV+S ED WALK
Sbjct: 121 TDITRMEWCEKQMEFSLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVQSFEDIWALK 180

Query: 181 LLNFTSGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH 240
           LLNF  GV+QL+ EGLTRELPVMGLVEGVW+VG+IDEIQMLEI T K+PMLIDTKTR+R 
Sbjct: 181 LLNFIVGVHQLVLEGLTRELPVMGLVEGVWIVGIIDEIQMLEINTTKIPMLIDTKTRVRD 240

Query: 241 TIPAEPQQRNGKLQLMCYKFLLDCLI-CDGFSTRQFFDFFSLNPHSILSEEIADSTVSFG 300
           TIPA PQ+RNGKLQLM YK LLD LI  DGF +  FFDFFSLNPHS LSEEIADS+ SFG
Sbjct: 241 TIPAVPQRRNGKLQLMFYKLLLDNLISSDGFPSDNFFDFFSLNPHSTLSEEIADSSTSFG 300

Query: 301 FTAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSL 360
           FTAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSII ED+FAYDHGWLKSQLE  L
Sbjct: 301 FTAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIVEDKFAYDHGWLKSQLEIQL 360

Query: 361 QVWHGQREPECTPPEERWKCRHCQYASDCPANA 393
           QVWHGQREPECTP EERWKCRHCQ+ASDCPANA
Sbjct: 361 QVWHGQREPECTPQEERWKCRHCQFASDCPANA 393

[Close]

BLAST of Carg03254 vs. ExPASy TrEMBL
Match: A0A0A0KC56 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G290860 PE=3 SV=1)

HSP 1 Score: 644.4 bits (1661), Expect = 3.1e-181
Identity = 330/392 (84.18%), Postives = 350/392 (89.29%), Query Frame = 0


Query: 1   MADSSSGLPPFNDDDNTHKDIPNIAVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 60
           MADS SGLPPF DDDNTH+  PNI VEIVSDEEMALIEAALAAAVTT+RSSSS IH  S 
Sbjct: 1   MADSHSGLPPFKDDDNTHEGFPNIPVEIVSDEEMALIEAALAAAVTTSRSSSSVIHSTSS 60

Query: 61  SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120
           SS +LFNTRSIHSITLLSKRG+ S+Q DIEDL K   TQKKIKVNESLLQRF+RNK LAV
Sbjct: 61  SSHSLFNTRSIHSITLLSKRGIHSTQPDIEDLGKIPITQKKIKVNESLLQRFKRNKPLAV 120

Query: 121 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK 180
           TDITR EWCEKQME  LLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQV+S ED WALK
Sbjct: 121 TDITRMEWCEKQMEFSLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVQSIEDIWALK 180

Query: 181 LLNFTSGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH 240
           LLNF  GV+QL+ EGLTRELPVMGLVEGVW+VG+IDEIQMLEI T K+PMLIDTKTR+R 
Sbjct: 181 LLNFIVGVHQLVLEGLTRELPVMGLVEGVWIVGIIDEIQMLEIDTTKIPMLIDTKTRVRD 240

Query: 241 TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGF 300
           TIPA PQ+RNGKLQLM YKFLLD LI DG S RQFFDFFSLNPHS LSEEI+D+T S GF
Sbjct: 241 TIPAVPQRRNGKLQLMFYKFLLDNLISDGLSIRQFFDFFSLNPHSTLSEEISDTTTSIGF 300

Query: 301 TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQ 360
           TAKTLDDVVRYYINCCSMLPPTHNQLL+RYESQKDQSII ED+FAYDHGWLK+QLET LQ
Sbjct: 301 TAKTLDDVVRYYINCCSMLPPTHNQLLIRYESQKDQSIIVEDKFAYDHGWLKTQLETQLQ 360

Query: 361 VWHGQREPECTPPEERWKCRHCQYASDCPANA 393
           VWHGQREPECTP EERWKCRHCQ+A DCP NA
Sbjct: 361 VWHGQREPECTPQEERWKCRHCQFAFDCPTNA 392

[Close]

BLAST of Carg03254 vs. TAIR 10
Match: AT5G60370.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Defects-in-morphology protein 1-like, mitochondrial (InterPro:IPR019190); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 357.5 bits (916), Expect = 1.4e-98
Identity = 201/404 (49.75%), Postives = 264/404 (65.35%), Query Frame = 0


Query: 4   SSSGLPPFNDDDNTHKDIPNIAVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSCSSQ 63
           + SG    +   + H   P I +EIVS+EEMA+++AALAA+ +   S   ++ P   ++ 
Sbjct: 22  AQSGTVSISSPQSHHVVFPEIPIEIVSEEEMAILDAALAASRSILPSVIRSVSPSRITAG 81

Query: 64  NLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAVTDI 123
              + ++I SITL SKR L S+  DIE               ES L RFRRN+ L VTD+
Sbjct: 82  G--SPKTIRSITLFSKRKL-SACSDIE---------------ESYLHRFRRNQALGVTDL 141

Query: 124 TRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALKLLN 183
           T TEWCEKQME  L  G RK  KAM+ G ARH  LE EVVKKV+V+V+S ED WALKLLN
Sbjct: 142 TGTEWCEKQMENVLCFGRRKVNKAMKVGQARHLQLEEEVVKKVRVKVESNEDKWALKLLN 201

Query: 184 FTSGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQ--MLEIGTCKVPMLIDTKTRMRHT 243
             +GVNQ LFEG TREL ++G V G W+VG+IDE++    E  +   P+LIDTKTR+R T
Sbjct: 202 SIAGVNQFLFEGRTRELLLLGFVGGQWIVGIIDELRKAYAEESSDSGPILIDTKTRLRDT 261

Query: 244 IPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGFT 303
           +PAEPQ+RNG+LQLM YK L D ++ +GF T  FFD+FSLN + +LS+++ D   + G  
Sbjct: 262 LPAEPQRRNGRLQLMLYKLLWDTIVKEGFPTGPFFDYFSLNRNYVLSQDVRDHIANAGIK 321

Query: 304 AKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQV 363
           A+TL+++VRYY N   MLP  +NQLLL+YE QKDQSII E  F +DH W+ S+    ++ 
Sbjct: 322 AQTLEEIVRYYENTFQMLPIANNQLLLKYEFQKDQSIIAEIRFNHDHEWVMSKYREVIEF 381

Query: 364 WHGQREPECTPPEERWKCRHCQYASDCPANASLK------PTRK 400
           W  +RE   TP EERWKCR+CQ+A  CP N S +      PTR+
Sbjct: 382 WRNEREAGYTPEEERWKCRYCQFAKSCPGNPSFESPSTSSPTRE 407

[Close]

BLAST of Carg03254 vs. TAIR 10
Match: AT3G57110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G60370.1); Has 16 Blast hits to 16 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 1.1e-05
Identity = 39/123 (31.71%), Postives = 62/123 (50.41%), Query Frame = 0


Query: 4   SSSGLPPFNDDDNTHKDIPNIAVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSCSSQ 63
           + SG    +   + H   P I +EI+++EE+ +++AALAA+ +   S   ++ P    + 
Sbjct: 22  AQSGTVSISSPQSHHVVFPEIPIEIINEEEIVILDAALAASHSILPSVIRSVSPSQMIAG 81

Query: 64  NLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAVTDI 123
              +  +I SITL SKR L +                 + + ES L RFRRN+ L VTD+
Sbjct: 82  G--SPITIRSITLFSKRKLSAC----------------LYIEESYLHRFRRNQSLGVTDL 126

Query: 124 TRT 127
           T T
Sbjct: 142 TGT 126

The following BLAST results are available for this feature:

BLAST of Carg03254 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010613.1	1.5e-227	100.00	Exonuclease V, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6570766.1	1.6e-224	98.75	Exonuclease V, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022943527.1	7.9e-224	98.25	LOW QUALITY PROTEIN: exonuclease V, chloroplastic-like [Cucurbita moschata]	[more]
XP_022985622.1	2.6e-222	97.51	exonuclease V, chloroplastic [Cucurbita maxima] >XP_022985623.1 exonuclease V, c...	[more]
XP_023511975.1	4.4e-222	98.00	LOW QUALITY PROTEIN: exonuclease V, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg03254 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKK6	2.0e-97	49.75	Exonuclease V, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g60370 PE=2 S...	[more]
A2VDX7	1.8e-32	30.91	Exonuclease V OS=Bos taurus OX=9913 GN=EXO5 PE=2 SV=2	[more]
Q9CXP9	1.2e-28	30.22	Exonuclease V OS=Mus musculus OX=10090 GN=Exo5 PE=2 SV=1	[more]
Q9H790	2.2e-27	29.69	Exonuclease V OS=Homo sapiens OX=9606 GN=EXO5 PE=1 SV=1	[more]
F1Q514	1.4e-26	29.87	Exonuclease V OS=Danio rerio OX=7955 GN=exo5 PE=3 SV=1	[more]

BLAST of Carg03254 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FT99	3.8e-224	98.25	LOW QUALITY PROTEIN: exonuclease V, chloroplastic-like OS=Cucurbita moschata OX=...	[more]
A0A6J1J5D7	1.2e-222	97.51	exonuclease V, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111483632 PE=3 SV...	[more]
A0A5A7SXN1	1.9e-183	85.75	Exonuclease V OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00520 P...	[more]
A0A1S3CLU8	2.8e-182	85.24	LOW QUALITY PROTEIN: exonuclease V, chloroplastic OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0KC56	3.1e-181	84.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G290860 PE=3 SV=1	[more]

BLAST of Carg03254 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60370.1	1.4e-98	49.75	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT3G57110.1	1.1e-05	31.71	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019190	Exonuclease V	PFAM	PF09810	Exo5	coord: 230..293 e-value: 4.8E-9 score: 36.2 coord: 320..388 e-value: 2.2E-14 score: 53.8 coord: 107..220 e-value: 1.6E-34 score: 120.0
IPR019190	Exonuclease V	PANTHER	PTHR14464	EXONUCLEASE V	coord: 14..393
IPR011604	Exonuclease, phage-type/RecB, C-terminal	GENE3D	3.90.320.10		coord: 96..391 e-value: 1.1E-6 score: 30.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03254-RA	Carg03254-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0036297	interstrand cross-link repair
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
cellular_component	GO:0005634	nucleus
molecular_function	GO:0045145	single-stranded DNA 5'-3' exodeoxyribonuclease activity