Carg03240 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03240
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of unknown function, DUF584
Location	Carg_Chr20: 2397069 .. 2397557 (+)
RNA-Seq Expression	Carg03240
Synteny	Carg03240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACCGGAAAAAGCTGTTACGGTCGCTCCGATTACCGTTTTCTCACCGGCCACCACCGCCGCCCGCACTCGTTCACGTCGGAGTTGTCGTTTGAATTCAACGAATCGGACATTTTCAACCTCGGTAGTTCGGAGTCTCCGGAGAGGCGGAGATCTCCAACTCCGGGGACGTCGATATCGAAGAAAGGTTCGTCGAAACGGGGGGAGGGCGGCGGAGGTGGAGCGTCGTCGCTGCCGGTGAATATTCCGGATTGGTCGAAGATTCTGAAGGAGGAGTATAGAGAGGAGCGGAGCTCGGAATACGAGGGGGATTTGGAGGAGGAAAGCGACGGCGACGAGGAAATGAGAGTACCGCCTCACGAGTTTTTGGCGAGGTCGAGAACGGCGTCGTTTTCGGTGCAGGAAGGAATTGGGAGGACGTTGAAAGGGAGAGATCTGAGTAGGGTCCGAAATGCAATTTGGGAAAAAACTGGGTTCCAGGATTGA

mRNA sequence

ATGGCGACCGGAAAAAGCTGTTACGGTCGCTCCGATTACCGTTTTCTCACCGGCCACCACCGCCGCCCGCACTCGTTCACGTCGGAGTTGTCGTTTGAATTCAACGAATCGGACATTTTCAACCTCGGTAGTTCGGAGTCTCCGGAGAGGCGGAGATCTCCAACTCCGGGGACGTCGATATCGAAGAAAGGTTCGTCGAAACGGGGGGAGGGCGGCGGAGGTGGAGCGTCGTCGCTGCCGGTGAATATTCCGGATTGGTCGAAGATTCTGAAGGAGGAGTATAGAGAGGAGCGGAGCTCGGAATACGAGGGGGATTTGGAGGAGGAAAGCGACGGCGACGAGGAAATGAGAGTACCGCCTCACGAGTTTTTGGCGAGGTCGAGAACGGCGTCGTTTTCGGTGCAGGAAGGAATTGGGAGGACGTTGAAAGGGAGAGATCTGAGTAGGGTCCGAAATGCAATTTGGGAAAAAACTGGGTTCCAGGATTGA

Coding sequence (CDS)

ATGGCGACCGGAAAAAGCTGTTACGGTCGCTCCGATTACCGTTTTCTCACCGGCCACCACCGCCGCCCGCACTCGTTCACGTCGGAGTTGTCGTTTGAATTCAACGAATCGGACATTTTCAACCTCGGTAGTTCGGAGTCTCCGGAGAGGCGGAGATCTCCAACTCCGGGGACGTCGATATCGAAGAAAGGTTCGTCGAAACGGGGGGAGGGCGGCGGAGGTGGAGCGTCGTCGCTGCCGGTGAATATTCCGGATTGGTCGAAGATTCTGAAGGAGGAGTATAGAGAGGAGCGGAGCTCGGAATACGAGGGGGATTTGGAGGAGGAAAGCGACGGCGACGAGGAAATGAGAGTACCGCCTCACGAGTTTTTGGCGAGGTCGAGAACGGCGTCGTTTTCGGTGCAGGAAGGAATTGGGAGGACGTTGAAAGGGAGAGATCTGAGTAGGGTCCGAAATGCAATTTGGGAAAAAACTGGGTTCCAGGATTGA

Protein sequence

MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTPGTSISKKGSSKRGEGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEEMRVPPHEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD

Homology

[Close]

BLAST of Carg03240 vs. NCBI nr
Match: KAG7010627.1 (hypothetical protein SDJN02_27421, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 322.8 bits (826), Expect = 1.7e-84
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTPGTSI 60
           MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTPGTSI
Sbjct: 1   MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTPGTSI 60

Query: 61  SKKGSSKRGEGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEEMRVPP 120
           SKKGSSKRGEGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEEMRVPP
Sbjct: 61  SKKGSSKRGEGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEEMRVPP 120

Query: 121 HEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD 163
           HEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD
Sbjct: 121 HEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD 162

[Close]

BLAST of Carg03240 vs. NCBI nr
Match: XP_022944337.1 (uncharacterized protein LOC111448807 [Cucurbita moschata])

HSP 1 Score: 321.6 bits (823), Expect = 3.8e-84
Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTPGTSI 60
           MATGK+CYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTPGTSI
Sbjct: 1   MATGKNCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTPGTSI 60

Query: 61  SKKGSSKRGEGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEEMRVPP 120
           SKKGSSKRGEGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEEMRVPP
Sbjct: 61  SKKGSSKRGEGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEEMRVPP 120

Query: 121 HEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD 163
           HEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD
Sbjct: 121 HEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD 162

[Close]

BLAST of Carg03240 vs. NCBI nr
Match: XP_022985841.1 (uncharacterized protein LOC111483768 [Cucurbita maxima])

HSP 1 Score: 310.5 bits (794), Expect = 8.8e-81
Identity = 156/162 (96.30%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTPGTSI 60
           MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFN GSSESPERR+SP P  SI
Sbjct: 1   MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNPGSSESPERRKSPAPAASI 60

Query: 61  SKKGSSKRGEGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEEMRVPP 120
           SKKGSSKRGEGGGGGASSLPVNIPDWSKILKEEYREERS EYEGDLEEESDGDEEMRVPP
Sbjct: 61  SKKGSSKRGEGGGGGASSLPVNIPDWSKILKEEYREERSLEYEGDLEEESDGDEEMRVPP 120

Query: 121 HEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD 163
           HEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD
Sbjct: 121 HEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD 162

[Close]

BLAST of Carg03240 vs. NCBI nr
Match: XP_023513244.1 (uncharacterized protein LOC111777757 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.5 bits (789), Expect = 3.3e-80
Identity = 157/163 (96.32%), Postives = 158/163 (96.93%), Query Frame = 0


Query: 1   MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTPGTSI 60
           MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFN G SESPERR+SPTP  SI
Sbjct: 1   MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNPGGSESPERRKSPTPAASI 60

Query: 61  SKKGSSKRGE-GGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEEMRVP 120
           SKKGSSKRGE GGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEEMRVP
Sbjct: 61  SKKGSSKRGEGGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEEMRVP 120

Query: 121 PHEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD 163
           PHEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD
Sbjct: 121 PHEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD 163

[Close]

BLAST of Carg03240 vs. NCBI nr
Match: KAG6570781.1 (hypothetical protein SDJN03_29696, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 290.8 bits (743), Expect = 7.2e-75
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTPGTSI 60
           MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTPGTSI
Sbjct: 1   MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTPGTSI 60

Query: 61  SKKGSSKRGEGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEEMRVPP 120
           SKKGSSKRGEGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEEMRVPP
Sbjct: 61  SKKGSSKRGEGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEEMRVPP 120

Query: 121 HEFLARSRTASFSVQEGIGRTLKGRDL 148
           HEFLARSRTASFSVQEGIGRTLKGRDL
Sbjct: 121 HEFLARSRTASFSVQEGIGRTLKGRDL 147

[Close]

BLAST of Carg03240 vs. ExPASy TrEMBL
Match: A0A6J1FVG2 (uncharacterized protein LOC111448807 OS=Cucurbita moschata OX=3662 GN=LOC111448807 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.8e-84
Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTPGTSI 60
           MATGK+CYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTPGTSI
Sbjct: 1   MATGKNCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTPGTSI 60

Query: 61  SKKGSSKRGEGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEEMRVPP 120
           SKKGSSKRGEGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEEMRVPP
Sbjct: 61  SKKGSSKRGEGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEEMRVPP 120

Query: 121 HEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD 163
           HEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD
Sbjct: 121 HEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD 162

[Close]

BLAST of Carg03240 vs. ExPASy TrEMBL
Match: A0A6J1J9C1 (uncharacterized protein LOC111483768 OS=Cucurbita maxima OX=3661 GN=LOC111483768 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 4.3e-81
Identity = 156/162 (96.30%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTPGTSI 60
           MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFN GSSESPERR+SP P  SI
Sbjct: 1   MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNPGSSESPERRKSPAPAASI 60

Query: 61  SKKGSSKRGEGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEEMRVPP 120
           SKKGSSKRGEGGGGGASSLPVNIPDWSKILKEEYREERS EYEGDLEEESDGDEEMRVPP
Sbjct: 61  SKKGSSKRGEGGGGGASSLPVNIPDWSKILKEEYREERSLEYEGDLEEESDGDEEMRVPP 120

Query: 121 HEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD 163
           HEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD
Sbjct: 121 HEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD 162

[Close]

BLAST of Carg03240 vs. ExPASy TrEMBL
Match: A0A6J1CIE6 (uncharacterized protein LOC111011233 OS=Momordica charantia OX=3673 GN=LOC111011233 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 5.8e-54
Identity = 120/169 (71.01%), Postives = 131/169 (77.51%), Query Frame = 0


Query: 1   MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTPGTSI 60
           MATGKSCYGRS+YRFL G H   HSF S+ SFE +ESDI+N  SS+SPE RRS  PG  I
Sbjct: 1   MATGKSCYGRSNYRFLPGGHLH-HSFASDSSFELSESDIYNSASSKSPEMRRSVAPGARI 60

Query: 61  SKKGSSKR-------GEGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGD 120
           SKK S KR       G   GGGASSLPVNIPDWSKILKEEYRE+   EY+ D E + D +
Sbjct: 61  SKKPSPKRSVESGDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSE 120

Query: 121 EEMRVPPHEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD 163
           + MRVPPHEFLAR+R ASFSV EGIGRTLKGRDLSRVRNAIWEKTGFQD
Sbjct: 121 DGMRVPPHEFLARTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFQD 168

[Close]

BLAST of Carg03240 vs. ExPASy TrEMBL
Match: A0A6J1KAF0 (uncharacterized protein LOC111491571 OS=Cucurbita maxima OX=3661 GN=LOC111491571 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.7e-53
Identity = 124/170 (72.94%), Postives = 135/170 (79.41%), Query Frame = 0


Query: 1   MATGKSCYGRSDYRFL----TGHHRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTP 60
           MA+GKSCYGRS+YRFL    +GHH   HSFTS+L FE NESDI+N GS  SPE RRSP P
Sbjct: 1   MASGKSCYGRSNYRFLSGDISGHH---HSFTSDLPFELNESDIYNSGSLISPEIRRSPIP 60

Query: 61  GTSISKKGSSKRGEGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEEM 120
              ISKK SS   E   GGASSLPVNIPDWSKILKEEYRE+RS EY+ D+EE+ D  EEM
Sbjct: 61  AKRISKKPSSNPVE-LRGGASSLPVNIPDWSKILKEEYREKRSVEYDEDMEEDEDDWEEM 120

Query: 121 RVPPHEFL----ARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD 163
           RVPPHEFL    AR+RTASFSV EGIGRTLKGRDLSRVRNAIWEK GF+D
Sbjct: 121 RVPPHEFLARQMARTRTASFSVHEGIGRTLKGRDLSRVRNAIWEKIGFED 166

[Close]

BLAST of Carg03240 vs. ExPASy TrEMBL
Match: A0A5A7SXR0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00170 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 6.4e-53
Identity = 121/170 (71.18%), Postives = 133/170 (78.24%), Query Frame = 0


Query: 1   MATGKSCYGRSDYRFLTGH---HRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTPG 60
           MATGKSCYGRS+YRFLTG    H   HSFTS+ SFE NESDI+N G++ SP R       
Sbjct: 1   MATGKSCYGRSNYRFLTGDISGHHHHHSFTSDFSFELNESDIYNSGTARSPTR------- 60

Query: 61  TSISKKGSSKRGE-GGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEEM 120
               KK SSKR E  GGGGASSLPVNIPDWSKILKEEYRE+RSSEY  D+E++ D +EEM
Sbjct: 61  -IPKKKISSKRVEVQGGGGASSLPVNIPDWSKILKEEYREKRSSEYADDMEDDEDEEEEM 120

Query: 121 RVPPHEFL----ARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD 163
           RVPPHEFL    AR+R ASFSV EGIGRTLKGRDLSRVRNAIWEKTGF+D
Sbjct: 121 RVPPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 162

[Close]

BLAST of Carg03240 vs. TAIR 10
Match: AT5G60680.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 144.8 bits (364), Expect = 6.0e-35
Identity = 85/164 (51.83%), Postives = 109/164 (66.46%), Query Frame = 0


Query: 1   MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTPGTSI 60
           MATGKS Y R  YRFL G  +  +   S+   EF+ESD+FN   S+SP+  R  +     
Sbjct: 1   MATGKSYYARPSYRFL-GTDQPSYFTASDSGLEFDESDLFNPIHSDSPDFCRKISSSVRS 60

Query: 61  SKKGSSK-RGEGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEEMR-V 120
            KK S++         ASSLPVN+PDWSKIL+ EYR+ R    E + +++ D ++    +
Sbjct: 61  GKKSSNRPSAASSAAAASSLPVNVPDWSKILRGEYRDNRRRSIEDNDDDDDDNEDGGDWL 120

Query: 121 PPHEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD 163
           PPHEFLA++R ASFSV EG+GRTLKGRDLSRVRNAI+EK GFQD
Sbjct: 121 PPHEFLAKTRMASFSVHEGVGRTLKGRDLSRVRNAIFEKFGFQD 163

[Close]

BLAST of Carg03240 vs. TAIR 10
Match: AT2G28400.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 121.3 bits (303), Expect = 7.1e-28
Identity = 82/167 (49.10%), Postives = 100/167 (59.88%), Query Frame = 0


Query: 1   MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTPGTSI 60
           MAT K  Y R  +RF T         T+   FE +E D+FN GS  S     S    TS 
Sbjct: 1   MATSKCYYPRPSHRFFT----TDQHVTATSDFELDEWDLFNTGSDSSSSFSFSDLTITS- 60

Query: 61  SKKGSSKRGEGG---GGGASSLPVNIPDWSKILKEEYREER--SSEYEGDLEEESDGDEE 120
            + G++++  GG   G  ASSLPVN+PDWSKIL +E R +R  S+E E D +E   G+  
Sbjct: 61  GRTGTNRQIHGGSDSGKAASSLPVNVPDWSKILGDESRRQRKISNEEEVDGDEILCGEGT 120

Query: 121 MRVPPHEFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD 163
            RVPPHE LA  R ASFSV EG GRTLKGRDLSRVRN I++  G +D
Sbjct: 121 RRVPPHELLANRRMASFSVHEGAGRTLKGRDLSRVRNTIFKIRGIED 162

[Close]

BLAST of Carg03240 vs. TAIR 10
Match: AT3G45210.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 117.9 bits (294), Expect = 7.8e-27
Identity = 79/161 (49.07%), Postives = 102/161 (63.35%), Query Frame = 0


Query: 2   ATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTPGTSIS 61
           AT KS Y R  +RFL     R ++ T +  FEF+ESD+++   S+SPE RR        S
Sbjct: 4   ATRKSYYQRPSHRFLPTD--RTYNVTGDSEFEFDESDLYS-NRSDSPEFRRK----LITS 63

Query: 62  KKGSSKRGEGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEEMRVPPH 121
            + SS         ASSLP+N+ +WSKIL +E R+         +E + DG E  ++PPH
Sbjct: 64  NRKSSPATVTTTTVASSLPMNVQNWSKILGKENRK--------SIENDDDGGEG-KLPPH 123

Query: 122 EFLARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGFQD 163
           E+LA++R ASFSV EGIGRTLKGRD+SRVRNAI EKTGF D
Sbjct: 124 EYLAKTRMASFSVHEGIGRTLKGRDMSRVRNAILEKTGFLD 148

[Close]

BLAST of Carg03240 vs. TAIR 10
Match: AT5G03230.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 116.7 bits (291), Expect = 1.7e-26
Identity = 72/146 (49.32%), Postives = 91/146 (62.33%), Query Frame = 0


Query: 27  TSELSFEFNESDIFNLGSSESP---ERRRSPTPGTSISKKGSSKRGEGGG---GGASSLP 86
           + E  FEF+ESDI NLG  + P   + +RS +   S  ++  +K G+ G        SLP
Sbjct: 23  SDENVFEFDESDIHNLGDHQLPNSFDAKRSIS--ISRLRRKPTKTGDSGNREITKTGSLP 82

Query: 87  VNIPDWSKILKEEYREERSSEYEGDLEEESDGDE----EMRVPPHEFLARSRTASFSVQE 146
           VNIPDWSKILK EYR     + + D ++E D D        +PPHE+LAR R +SF+V E
Sbjct: 83  VNIPDWSKILKSEYRGHAIPDDDSDDDDEDDDDSNDGGRRMIPPHEYLARRRGSSFTVHE 142

Query: 147 GIGRTLKGRDLSRVRNAIWEKTGFQD 163
           GIG T KGRDL R+RNAIWEK GFQD
Sbjct: 143 GIGGTAKGRDLRRLRNAIWEKIGFQD 166

[Close]

BLAST of Carg03240 vs. TAIR 10
Match: AT4G04630.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 93.2 bits (230), Expect = 2.1e-19
Identity = 64/157 (40.76%), Postives = 90/157 (57.32%), Query Frame = 0


Query: 17  TGHHRRPHSFTSELSFEFNESDIFNL---GSSESPERRRSPTPGTSISKKGSS-----KR 76
           T + RR  S   E   EF E D++++   G + SPE +   +  +S S   SS     + 
Sbjct: 10  THNSRRVPSMGIEGDEEFQEEDVWSVLREGETSSPEMKIPKSHFSSSSSSSSSPWNIRRS 69

Query: 77  GEGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEE-MRVPPHEF---- 136
            E  G   SS P+N+PDWSK+  +     RSS       ++ D D++   VPPHE+    
Sbjct: 70  KEVSGVKQSSAPMNVPDWSKVYGDSKSNRRSSHLHSHAADDDDEDDDGCMVPPHEWVARK 129

Query: 137 LARSRTASFSVQEGIGRTLKGRDLSRVRNAIWEKTGF 161
           LAR++ +SFS+ EG+GRTLKGRDLS+VRNA+  KTGF
Sbjct: 130 LARTQISSFSMCEGVGRTLKGRDLSKVRNAVLSKTGF 166

The following BLAST results are available for this feature:

BLAST of Carg03240 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010627.1	1.7e-84	100.00	hypothetical protein SDJN02_27421, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022944337.1	3.8e-84	99.38	uncharacterized protein LOC111448807 [Cucurbita moschata]	[more]
XP_022985841.1	8.8e-81	96.30	uncharacterized protein LOC111483768 [Cucurbita maxima]	[more]
XP_023513244.1	3.3e-80	96.32	uncharacterized protein LOC111777757 [Cucurbita pepo subsp. pepo]	[more]
KAG6570781.1	7.2e-75	100.00	hypothetical protein SDJN03_29696, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Carg03240 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg03240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FVG2	1.8e-84	99.38	uncharacterized protein LOC111448807 OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]
A0A6J1J9C1	4.3e-81	96.30	uncharacterized protein LOC111483768 OS=Cucurbita maxima OX=3661 GN=LOC111483768...	[more]
A0A6J1CIE6	5.8e-54	71.01	uncharacterized protein LOC111011233 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A6J1KAF0	1.7e-53	72.94	uncharacterized protein LOC111491571 OS=Cucurbita maxima OX=3661 GN=LOC111491571...	[more]
A0A5A7SXR0	6.4e-53	71.18	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Carg03240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60680.1	6.0e-35	51.83	Protein of unknown function, DUF584	[more]
AT2G28400.1	7.1e-28	49.10	Protein of unknown function, DUF584	[more]
AT3G45210.1	7.8e-27	49.07	Protein of unknown function, DUF584	[more]
AT5G03230.1	1.7e-26	49.32	Protein of unknown function, DUF584	[more]
AT4G04630.1	2.1e-19	40.76	Protein of unknown function, DUF584	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 33..162 e-value: 2.0E-40 score: 139.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..65
None	No IPR available	PANTHER	PTHR46525:SF2	EMB\|CAB72159.1	coord: 1..162
None	No IPR available	PANTHER	PTHR46525	EMB\|CAB72159.1	coord: 1..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03240-RA	Carg03240-RA	mRNA