Carg03175 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03175
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Location	Carg_Chr20: 2731850 .. 2733211 (-)
RNA-Seq Expression	Carg03175
Synteny	Carg03175

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTATAGCCCGTCTACTTCACGAGAATATTCCCGTCGGTTTCCTGTGTGTTTTGTCGACGTCATCGCCTTCATCTCAGTATAAGTTCTTAATGCGCTTCACTTCATCATCAATCACAGCGCTGAATGGTTCTGCTTCTTCTCATCACTTATCTGCTTTGACTGTTTGCCGGCGACGGGGAATCTGGCTGTCCAAGAACCTCCGAACCTCTCGATTTCAGTTTCCGGCGACTGAGGTATTTCAAAAACAGAGCCTCATTTTTCTCTTTGATTCGTATTTAGGAACGATGCCGAACCCTAGGTCTTACCGGAAAGGGACGGAGGATAAGACTCGGAAGGGGAAGCTTACGGAGAAGTCGTCGTCGTTTCACGGAGAGAGTTTGAAGAAGACGACGACGACGACGACGCTGCGGCGGCCGAAGACGGATCCGGAGTTGTTGTCCTTCAAGAATTTAGGTTTATCAGCGGCGTCGCTGAATGGACGGCCGAAGATGACGAAATTACTCCTCAACGTGACGATCCAGGGTATCCTTGGGCCAGTACAGGTGTTGATGTCGTCGGAGATGACCGTCGCCGACCTTGTAGCGGCTACCATACGCCAATACATGAAGGAAGGCCGTCGGCCGATTTTGCCGACTGTAAATCCCTCCGCCTTCGATCTTCATTATTCGCAATTCAGCTTAGAAAGTAAGTAGTCGATGATTAACTCAAATTGTTGTAACCGCCATTTATTTTGAATTTCGCGGGTGGTTCTAACGAGATAATGATTCGAATCTCAGGTTTGAACAAGGAGGAGAAGCTAATCGCGTTGGGATCGAGAAACTTCTATCTGTGCCCTAGAAAATCGAAGAACAGCGACGATTTAATAGCGTCTCCATCGTCGTCCTGCTCGACACAAGCCAAAGAAAGCGCGAAGAGTTCCAGCAGTTTCAGTTGGTTCAAATTCATCGATTTCCAGATTTAGTTACCGCCACACATCGAATCGATTCATAATTTTCAATCCGCCACTGTGAAAAATCATCTTCAAATTCTCTATTCCATATAAGTTTGGAATTATCTCCACTTTGCAATTGTTTGGTTAGATTATTACCGGAATTCGATCGAGCAAAGGAAAGGGAACATTTCTGCAACTCTGTTCTTCGCTTGCTTGCTCGGAATCGACACCGGAAATTTTCAATTTTCAATATGTAAATAATAATAGTTTCGATGTGGAAACTAAGTTTTTCCTGTGAAGAGTAGAAATTATGTGAATTTTTTTTTATCCAATTCAACTATGAGTCTGAAACATAAGGATTCAATGAACAAAGTCTCGACCCTAAGAATCTCGAGATTCCGTGTAGATTTTGTTGGATGATAAATGTCTC

mRNA sequence

GCTATAGCCCGTCTACTTCACGAGAATATTCCCGTCGGTTTCCTGTGTGTTTTGTCGACGTCATCGCCTTCATCTCAGTATAAGTTCTTAATGCGCTTCACTTCATCATCAATCACAGCGCTGAATGGTTCTGCTTCTTCTCATCACTTATCTGCTTTGACTGTTTGCCGGCGACGGGGAATCTGGCTGTCCAAGAACCTCCGAACCTCTCGATTTCAGTTTCCGGCGACTGAGGTATTTCAAAAACAGAGCCTCATTTTTCTCTTTGATTCGTATTTAGGAACGATGCCGAACCCTAGGTCTTACCGGAAAGGGACGGAGGATAAGACTCGGAAGGGGAAGCTTACGGAGAAGTCGTCGTCGTTTCACGGAGAGAGTTTGAAGAAGACGACGACGACGACGACGCTGCGGCGGCCGAAGACGGATCCGGAGTTGTTGTCCTTCAAGAATTTAGGTTTATCAGCGGCGTCGCTGAATGGACGGCCGAAGATGACGAAATTACTCCTCAACGTGACGATCCAGGGTATCCTTGGGCCAGTACAGGTGTTGATGTCGTCGGAGATGACCGTCGCCGACCTTGTAGCGGCTACCATACGCCAATACATGAAGGAAGGCCGTCGGCCGATTTTGCCGACTGTAAATCCCTCCGCCTTCGATCTTCATTATTCGCAATTCAGCTTAGAAAGTTTGAACAAGGAGGAGAAGCTAATCGCGTTGGGATCGAGAAACTTCTATCTGTGCCCTAGAAAATCGAAGAACAGCGACGATTTAATAGCGTCTCCATCGTCGTCCTGCTCGACACAAGCCAAAGAAAGCGCGAAGAGTTCCAGCAGTTTCAGTTGGTTCAAATTCATCGATTTCCAGATTTAGTTACCGCCACACATCGAATCGATTCATAATTTTCAATCCGCCACTGTGAAAAATCATCTTCAAATTCTCTATTCCATATAAGTTTGGAATTATCTCCACTTTGCAATTGTTTGGTTAGATTATTACCGGAATTCGATCGAGCAAAGGAAAGGGAACATTTCTGCAACTCTGTTCTTCGCTTGCTTGCTCGGAATCGACACCGGAAATTTTCAATTTTCAATATGTAAATAATAATAGTTTCGATGTGGAAACTAAGTTTTTCCTGTGAAGAGTAGAAATTATGTGAATTTTTTTTTATCCAATTCAACTATGAGTCTGAAACATAAGGATTCAATGAACAAAGTCTCGACCCTAAGAATCTCGAGATTCCGTGTAGATTTTGTTGGATGATAAATGTCTC

Coding sequence (CDS)

ATGCGCTTCACTTCATCATCAATCACAGCGCTGAATGGTTCTGCTTCTTCTCATCACTTATCTGCTTTGACTGTTTGCCGGCGACGGGGAATCTGGCTGTCCAAGAACCTCCGAACCTCTCGATTTCAGTTTCCGGCGACTGAGGTATTTCAAAAACAGAGCCTCATTTTTCTCTTTGATTCGTATTTAGGAACGATGCCGAACCCTAGGTCTTACCGGAAAGGGACGGAGGATAAGACTCGGAAGGGGAAGCTTACGGAGAAGTCGTCGTCGTTTCACGGAGAGAGTTTGAAGAAGACGACGACGACGACGACGCTGCGGCGGCCGAAGACGGATCCGGAGTTGTTGTCCTTCAAGAATTTAGGTTTATCAGCGGCGTCGCTGAATGGACGGCCGAAGATGACGAAATTACTCCTCAACGTGACGATCCAGGGTATCCTTGGGCCAGTACAGGTGTTGATGTCGTCGGAGATGACCGTCGCCGACCTTGTAGCGGCTACCATACGCCAATACATGAAGGAAGGCCGTCGGCCGATTTTGCCGACTGTAAATCCCTCCGCCTTCGATCTTCATTATTCGCAATTCAGCTTAGAAAGTTTGAACAAGGAGGAGAAGCTAATCGCGTTGGGATCGAGAAACTTCTATCTGTGCCCTAGAAAATCGAAGAACAGCGACGATTTAATAGCGTCTCCATCGTCGTCCTGCTCGACACAAGCCAAAGAAAGCGCGAAGAGTTCCAGCAGTTTCAGTTGGTTCAAATTCATCGATTTCCAGATTTAG

Protein sequence

MRFTSSSITALNGSASSHHLSALTVCRRRGIWLSKNLRTSRFQFPATEVFQKQSLIFLFDSYLGTMPNPRSYRKGTEDKTRKGKLTEKSSSFHGESLKKTTTTTTLRRPKTDPELLSFKNLGLSAASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNPSAFDLHYSQFSLESLNKEEKLIALGSRNFYLCPRKSKNSDDLIASPSSSCSTQAKESAKSSSSFSWFKFIDFQI

Homology

[Close]

BLAST of Carg03175 vs. NCBI nr
Match: KAG7010690.1 (hypothetical protein SDJN02_27486 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 494.2 bits (1271), Expect = 6.9e-136
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MRFTSSSITALNGSASSHHLSALTVCRRRGIWLSKNLRTSRFQFPATEVFQKQSLIFLFD 60
           MRFTSSSITALNGSASSHHLSALTVCRRRGIWLSKNLRTSRFQFPATEVFQKQSLIFLFD
Sbjct: 1   MRFTSSSITALNGSASSHHLSALTVCRRRGIWLSKNLRTSRFQFPATEVFQKQSLIFLFD 60

Query: 61  SYLGTMPNPRSYRKGTEDKTRKGKLTEKSSSFHGESLKKTTTTTTLRRPKTDPELLSFKN 120
           SYLGTMPNPRSYRKGTEDKTRKGKLTEKSSSFHGESLKKTTTTTTLRRPKTDPELLSFKN
Sbjct: 61  SYLGTMPNPRSYRKGTEDKTRKGKLTEKSSSFHGESLKKTTTTTTLRRPKTDPELLSFKN 120

Query: 121 LGLSAASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPIL 180
           LGLSAASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPIL
Sbjct: 121 LGLSAASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPIL 180

Query: 181 PTVNPSAFDLHYSQFSLESLNKEEKLIALGSRNFYLCPRKSKNSDDLIASPSSSCSTQAK 240
           PTVNPSAFDLHYSQFSLESLNKEEKLIALGSRNFYLCPRKSKNSDDLIASPSSSCSTQAK
Sbjct: 181 PTVNPSAFDLHYSQFSLESLNKEEKLIALGSRNFYLCPRKSKNSDDLIASPSSSCSTQAK 240

Query: 241 ESAKSSSSFSWFKFIDFQI 260
           ESAKSSSSFSWFKFIDFQI
Sbjct: 241 ESAKSSSSFSWFKFIDFQI 259

[Close]

BLAST of Carg03175 vs. NCBI nr
Match: KAG6570844.1 (hypothetical protein SDJN03_29759, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 367.1 bits (941), Expect = 1.3e-97
Identity = 193/194 (99.48%), Postives = 193/194 (99.48%), Query Frame = 0


Query: 66  MPNPRSYRKGTEDKTRKGKLTEKSSSFHGESLKKTTTTTTLRRPKTDPELLSFKNLGLSA 125
           MPNPRSYRKGTEDKTRKGKLTEKSSSFHGESLK TTTTTTLRRPKTDPELLSFKNLGLSA
Sbjct: 1   MPNPRSYRKGTEDKTRKGKLTEKSSSFHGESLKTTTTTTTLRRPKTDPELLSFKNLGLSA 60

Query: 126 ASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNP 185
           ASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNP
Sbjct: 61  ASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNP 120

Query: 186 SAFDLHYSQFSLESLNKEEKLIALGSRNFYLCPRKSKNSDDLIASPSSSCSTQAKESAKS 245
           SAFDLHYSQFSLESLNKEEKLIALGSRNFYLCPRKSKNSDDLIASPSSSCSTQAKESAKS
Sbjct: 121 SAFDLHYSQFSLESLNKEEKLIALGSRNFYLCPRKSKNSDDLIASPSSSCSTQAKESAKS 180

Query: 246 SSSFSWFKFIDFQI 260
           SSSFSWFKFIDFQI
Sbjct: 181 SSSFSWFKFIDFQI 194

[Close]

BLAST of Carg03175 vs. NCBI nr
Match: XP_023513044.1 (uncharacterized protein LOC111777605 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360.9 bits (925), Expect = 9.1e-96
Identity = 192/194 (98.97%), Postives = 192/194 (98.97%), Query Frame = 0


Query: 66  MPNPRSYRKGTEDKTRKGKLTEKSSSFHGESLKKTTTTTTLRRPKTDPELLSFKNLGLSA 125
           MPNPRSYRKGTEDKTRKGKLTEKSSSFHGESLK  TTTTTLRRPKTDPELLSFKNLGLSA
Sbjct: 1   MPNPRSYRKGTEDKTRKGKLTEKSSSFHGESLK--TTTTTLRRPKTDPELLSFKNLGLSA 60

Query: 126 ASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNP 185
           ASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNP
Sbjct: 61  ASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNP 120

Query: 186 SAFDLHYSQFSLESLNKEEKLIALGSRNFYLCPRKSKNSDDLIASPSSSCSTQAKESAKS 245
           SAFDLHYSQFSLESLNKEEKLIALGSRNFYLCPRKSKNSDDLIASPSSSCSTQAKESAKS
Sbjct: 121 SAFDLHYSQFSLESLNKEEKLIALGSRNFYLCPRKSKNSDDLIASPSSSCSTQAKESAKS 180

Query: 246 SSSFSWFKFIDFQI 260
           SSSFSWFKFIDFQI
Sbjct: 181 SSSFSWFKFIDFQI 192

[Close]

BLAST of Carg03175 vs. NCBI nr
Match: XP_022943366.1 (uncharacterized protein LOC111448149 [Cucurbita moschata])

HSP 1 Score: 358.6 bits (919), Expect = 4.5e-95
Identity = 191/194 (98.45%), Postives = 191/194 (98.45%), Query Frame = 0


Query: 66  MPNPRSYRKGTEDKTRKGKLTEKSSSFHGESLKKTTTTTTLRRPKTDPELLSFKNLGLSA 125
           MPNPR YRKGTEDKTRKGKLTEKSSSFHGESL KTTTTTTLRRPKTDPELLSFKNLGLSA
Sbjct: 1   MPNPRPYRKGTEDKTRKGKLTEKSSSFHGESL-KTTTTTTLRRPKTDPELLSFKNLGLSA 60

Query: 126 ASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNP 185
           ASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNP
Sbjct: 61  ASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNP 120

Query: 186 SAFDLHYSQFSLESLNKEEKLIALGSRNFYLCPRKSKNSDDLIASPSSSCSTQAKESAKS 245
           SAFDLHYSQFSLE LNKEEKLIALGSRNFYLCPRKSKNSDDLIASPSSSCSTQAKESAKS
Sbjct: 121 SAFDLHYSQFSLEILNKEEKLIALGSRNFYLCPRKSKNSDDLIASPSSSCSTQAKESAKS 180

Query: 246 SSSFSWFKFIDFQI 260
           SSSFSWFKFIDFQI
Sbjct: 181 SSSFSWFKFIDFQI 193

[Close]

BLAST of Carg03175 vs. NCBI nr
Match: XP_022986384.1 (uncharacterized protein LOC111484138 [Cucurbita maxima])

HSP 1 Score: 353.6 bits (906), Expect = 1.4e-93
Identity = 188/194 (96.91%), Postives = 189/194 (97.42%), Query Frame = 0


Query: 66  MPNPRSYRKGTEDKTRKGKLTEKSSSFHGESLKKTTTTTTLRRPKTDPELLSFKNLGLSA 125
           MPNPRSYRKGTEDKTRKGKLTEKSSSFHGESLK   TTTTLRRPKTDPELLSFKNL LS 
Sbjct: 1   MPNPRSYRKGTEDKTRKGKLTEKSSSFHGESLK---TTTTLRRPKTDPELLSFKNLDLSV 60

Query: 126 ASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNP 185
           ASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNP
Sbjct: 61  ASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNP 120

Query: 186 SAFDLHYSQFSLESLNKEEKLIALGSRNFYLCPRKSKNSDDLIASPSSSCSTQAKESAKS 245
           SAFDLHYSQFSLESLNKEEKLIALGSRNFYLCPRKSKNSDDLIASPSSSCSTQAKESAKS
Sbjct: 121 SAFDLHYSQFSLESLNKEEKLIALGSRNFYLCPRKSKNSDDLIASPSSSCSTQAKESAKS 180

Query: 246 SSSFSWFKFIDFQI 260
           SS+FSWFKFIDFQI
Sbjct: 181 SSNFSWFKFIDFQI 191

[Close]

BLAST of Carg03175 vs. ExPASy Swiss-Prot
Match: Q56XJ7 (Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-08
Identity = 31/81 (38.27%), Postives = 50/81 (61.73%), Query Frame = 0


Query: 136 KLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNPSAFDLHYSQF 195
           K++++V ++G  GPV+ ++     V + +   + +Y KEGR P L     SAF+LH S F
Sbjct: 123 KVIISVAVEGSPGPVRAMVKLSCNVEETIKIVVDKYCKEGRTPKLD--RDSAFELHQSHF 182

Query: 196 SLESLNKEEKLIALGSRNFYL 217
           S++ L K E +  LGSR+FY+
Sbjct: 183 SIQCLEKREIIGELGSRSFYM 201

[Close]

BLAST of Carg03175 vs. ExPASy TrEMBL
Match: A0A6J1FRI6 (uncharacterized protein LOC111448149 OS=Cucurbita moschata OX=3662 GN=LOC111448149 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 2.2e-95
Identity = 191/194 (98.45%), Postives = 191/194 (98.45%), Query Frame = 0


Query: 66  MPNPRSYRKGTEDKTRKGKLTEKSSSFHGESLKKTTTTTTLRRPKTDPELLSFKNLGLSA 125
           MPNPR YRKGTEDKTRKGKLTEKSSSFHGESL KTTTTTTLRRPKTDPELLSFKNLGLSA
Sbjct: 1   MPNPRPYRKGTEDKTRKGKLTEKSSSFHGESL-KTTTTTTLRRPKTDPELLSFKNLGLSA 60

Query: 126 ASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNP 185
           ASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNP
Sbjct: 61  ASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNP 120

Query: 186 SAFDLHYSQFSLESLNKEEKLIALGSRNFYLCPRKSKNSDDLIASPSSSCSTQAKESAKS 245
           SAFDLHYSQFSLE LNKEEKLIALGSRNFYLCPRKSKNSDDLIASPSSSCSTQAKESAKS
Sbjct: 121 SAFDLHYSQFSLEILNKEEKLIALGSRNFYLCPRKSKNSDDLIASPSSSCSTQAKESAKS 180

Query: 246 SSSFSWFKFIDFQI 260
           SSSFSWFKFIDFQI
Sbjct: 181 SSSFSWFKFIDFQI 193

[Close]

BLAST of Carg03175 vs. ExPASy TrEMBL
Match: A0A6J1JFX4 (uncharacterized protein LOC111484138 OS=Cucurbita maxima OX=3661 GN=LOC111484138 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 7.0e-94
Identity = 188/194 (96.91%), Postives = 189/194 (97.42%), Query Frame = 0


Query: 66  MPNPRSYRKGTEDKTRKGKLTEKSSSFHGESLKKTTTTTTLRRPKTDPELLSFKNLGLSA 125
           MPNPRSYRKGTEDKTRKGKLTEKSSSFHGESLK   TTTTLRRPKTDPELLSFKNL LS 
Sbjct: 1   MPNPRSYRKGTEDKTRKGKLTEKSSSFHGESLK---TTTTLRRPKTDPELLSFKNLDLSV 60

Query: 126 ASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNP 185
           ASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNP
Sbjct: 61  ASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNP 120

Query: 186 SAFDLHYSQFSLESLNKEEKLIALGSRNFYLCPRKSKNSDDLIASPSSSCSTQAKESAKS 245
           SAFDLHYSQFSLESLNKEEKLIALGSRNFYLCPRKSKNSDDLIASPSSSCSTQAKESAKS
Sbjct: 121 SAFDLHYSQFSLESLNKEEKLIALGSRNFYLCPRKSKNSDDLIASPSSSCSTQAKESAKS 180

Query: 246 SSSFSWFKFIDFQI 260
           SS+FSWFKFIDFQI
Sbjct: 181 SSNFSWFKFIDFQI 191

[Close]

BLAST of Carg03175 vs. ExPASy TrEMBL
Match: A0A6J1CHP9 (uncharacterized protein At4g22758 OS=Momordica charantia OX=3673 GN=LOC111011001 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 1.1e-78
Identity = 159/194 (81.96%), Postives = 176/194 (90.72%), Query Frame = 0


Query: 66  MPNPRSYRKGTEDKTRKGKLTEKSSSFHGESLKKTTTTTTLRRPKTDPELLSFKNLGLSA 125
           MPNPRSYRKG EDK RKGKLTEKSSSFHGES   T TTT LRRPKTDPEL SFKNLG+SA
Sbjct: 1   MPNPRSYRKGAEDKNRKGKLTEKSSSFHGES--STKTTTMLRRPKTDPELSSFKNLGISA 60

Query: 126 ASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNP 185
            SL+GRPKMTKLLLNVTIQG +GPVQV++S EMTVADLVAAT+RQY+KEGRRPILPT +P
Sbjct: 61  PSLDGRPKMTKLLLNVTIQGSVGPVQVIVSPEMTVADLVAATVRQYLKEGRRPILPTTDP 120

Query: 186 SAFDLHYSQFSLESLNKEEKLIALGSRNFYLCPRKSKNSDDLIASPSSSCSTQAKESAKS 245
           S FDLHYSQFSLESLNKEEKLIALGSRNF+LCPRKS++  D++AS SSSCS QA+ES+K+
Sbjct: 121 STFDLHYSQFSLESLNKEEKLIALGSRNFFLCPRKSEDEGDVMASLSSSCSKQAEESSKT 180

Query: 246 SSSFSWFKFIDFQI 260
           SSS SWFKFIDF+I
Sbjct: 181 SSSSSWFKFIDFRI 192

[Close]

BLAST of Carg03175 vs. ExPASy TrEMBL
Match: A0A6J1H539 (uncharacterized protein At4g22758 OS=Cucurbita moschata OX=3662 GN=LOC111459661 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 4.7e-74
Identity = 156/195 (80.00%), Postives = 172/195 (88.21%), Query Frame = 0


Query: 66  MPNPRSYRKGTEDKTRKGKLTEKSSSFHGESLKKTTTTTTLRRPKTDPELLSFKNLGLSA 125
           MPNP+SY        RKGKLTEKSSSFHGE  K T T  TLRRPKTDPELLSFKNLGLSA
Sbjct: 1   MPNPKSY--------RKGKLTEKSSSFHGE--KPTKTAATLRRPKTDPELLSFKNLGLSA 60

Query: 126 ASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNP 185
            SL+GRPKMTKLL NVTIQG LGPVQVLMS +MTVADLVAAT+RQY+KE RRPILPT +P
Sbjct: 61  PSLDGRPKMTKLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADP 120

Query: 186 SAFDLHYSQFSLESLNKEEKLIALGSRNFYLCPRKSKNSDDLIA-SPSSSCSTQAKESAK 245
           SAFDLHYSQFSLESLN++EKLIALGSRNF+LCPRKS+++DDL+A S SSSCSTQAKE+AK
Sbjct: 121 SAFDLHYSQFSLESLNEDEKLIALGSRNFFLCPRKSEDNDDLVASSSSSSCSTQAKENAK 180

Query: 246 SSSSFSWFKFIDFQI 260
           SSS FSWFKFI+F+I
Sbjct: 181 SSSGFSWFKFIEFRI 185

[Close]

BLAST of Carg03175 vs. ExPASy TrEMBL
Match: A0A6J1K3Z9 (uncharacterized protein At4g22758-like OS=Cucurbita maxima OX=3661 GN=LOC111491488 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.8e-73
Identity = 155/195 (79.49%), Postives = 172/195 (88.21%), Query Frame = 0


Query: 66  MPNPRSYRKGTEDKTRKGKLTEKSSSFHGESLKKTTTTTTLRRPKTDPELLSFKNLGLSA 125
           MPNP+SY        RKGKLTEKSSSFHGE  + T T  TLRRPKTDPELLSFK LGLSA
Sbjct: 1   MPNPKSY--------RKGKLTEKSSSFHGE--RPTKTAATLRRPKTDPELLSFKKLGLSA 60

Query: 126 ASLNGRPKMTKLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNP 185
            SL+GRPKMTKLL NVTIQG LGPVQVLMS +MTVADLVAAT+RQY+KE RRPILPT +P
Sbjct: 61  PSLDGRPKMTKLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADP 120

Query: 186 SAFDLHYSQFSLESLNKEEKLIALGSRNFYLCPRKSKNSDDLIA-SPSSSCSTQAKESAK 245
           SAFDLHYSQFSLESLN++EKLIALGSRNF+LCPRKS+++DDL+A S SSSCSTQAKE+AK
Sbjct: 121 SAFDLHYSQFSLESLNEDEKLIALGSRNFFLCPRKSEDNDDLVASSSSSSCSTQAKENAK 180

Query: 246 SSSSFSWFKFIDFQI 260
           SSSSFSWFKFI+F+I
Sbjct: 181 SSSSFSWFKFIEFRI 185

[Close]

BLAST of Carg03175 vs. TAIR 10
Match: AT2G27830.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits to 131 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 161.4 bits (407), Expect = 9.8e-40
Identity = 91/180 (50.56%), Postives = 120/180 (66.67%), Query Frame = 0


Query: 78  DKTRKGKLTEKSSSFHGESLKKTTTTTTLRRPKTDPELLSFKNLGLSAASLNGRPKMTKL 137
           +K+ + KL+EK+ SFHG      +    LRRPKT PEL S         +++  P++TKL
Sbjct: 13  EKSHRRKLSEKAMSFHGRGTTPLSNPGELRRPKTLPELFSTGQSITVPETVSLPPRLTKL 72

Query: 138 LLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNPSAFDLHYSQFSL 197
           LLNVT+QG LG VQ+++S E TV+DL+ A +RQY+KE RRP LP   PS FDLHYSQFSL
Sbjct: 73  LLNVTVQGSLGAVQIIISPESTVSDLIDAAVRQYVKEARRPFLPESEPSRFDLHYSQFSL 132

Query: 198 ESLNKEEKLIALGSRNFYLCPRKSKNSDDLIASPSSSCSTQAKESAKSSSSFSWFKFIDF 257
           ES+ ++EKLI+LGSRNF+LC RK           S SCS +A++ AK  + F W KF+ F
Sbjct: 133 ESIVRDEKLISLGSRNFFLCGRKETGGFIGCGLSSESCSKEAEKVAK--TGFHWLKFMGF 190

[Close]

BLAST of Carg03175 vs. TAIR 10
Match: AT4G22758.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G27830.1). )

HSP 1 Score: 62.0 bits (149), Expect = 8.1e-10
Identity = 31/81 (38.27%), Postives = 50/81 (61.73%), Query Frame = 0


Query: 136 KLLLNVTIQGILGPVQVLMSSEMTVADLVAATIRQYMKEGRRPILPTVNPSAFDLHYSQF 195
           K++++V ++G  GPV+ ++     V + +   + +Y KEGR P L     SAF+LH S F
Sbjct: 123 KVIISVAVEGSPGPVRAMVKLSCNVEETIKIVVDKYCKEGRTPKLD--RDSAFELHQSHF 182

Query: 196 SLESLNKEEKLIALGSRNFYL 217
           S++ L K E +  LGSR+FY+
Sbjct: 183 SIQCLEKREIIGELGSRSFYM 201

The following BLAST results are available for this feature:

BLAST of Carg03175 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010690.1	6.9e-136	100.00	hypothetical protein SDJN02_27486 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6570844.1	1.3e-97	99.48	hypothetical protein SDJN03_29759, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023513044.1	9.1e-96	98.97	uncharacterized protein LOC111777605 [Cucurbita pepo subsp. pepo]	[more]
XP_022943366.1	4.5e-95	98.45	uncharacterized protein LOC111448149 [Cucurbita moschata]	[more]
XP_022986384.1	1.4e-93	96.91	uncharacterized protein LOC111484138 [Cucurbita maxima]	[more]

BLAST of Carg03175 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56XJ7	1.1e-08	38.27	Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 P...	[more]

BLAST of Carg03175 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FRI6	2.2e-95	98.45	uncharacterized protein LOC111448149 OS=Cucurbita moschata OX=3662 GN=LOC1114481...	[more]
A0A6J1JFX4	7.0e-94	96.91	uncharacterized protein LOC111484138 OS=Cucurbita maxima OX=3661 GN=LOC111484138...	[more]
A0A6J1CHP9	1.1e-78	81.96	uncharacterized protein At4g22758 OS=Momordica charantia OX=3673 GN=LOC111011001...	[more]
A0A6J1H539	4.7e-74	80.00	uncharacterized protein At4g22758 OS=Cucurbita moschata OX=3662 GN=LOC111459661 ...	[more]
A0A6J1K3Z9	1.8e-73	79.49	uncharacterized protein At4g22758-like OS=Cucurbita maxima OX=3661 GN=LOC1114914...	[more]

BLAST of Carg03175 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27830.1	9.8e-40	50.56	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G22758.1	8.1e-10	38.27	unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..94
None	No IPR available	PANTHER	PTHR33270:SF24	EXPRESSED PROTEIN	coord: 66..257
IPR040358	Uncharacterized protein At4g22758-like	PANTHER	PTHR33270	BNAC05G50380D PROTEIN	coord: 66..257

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03175-RA	Carg03175-RA	mRNA